Cp4.1LG08g06650 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g06650
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin-like 1-1, chloroplastic
Location	Cp4.1LG08: 138050 .. 140931 (+)
RNA-Seq Expression	Cp4.1LG08g06650
Synteny	Cp4.1LG08g06650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGACTAAAGCATGATTTTTTTCAAAGAAAGTTTGAATTTTAGAGGCAAGGAATATATAGATGTGGTCAATGGCTTCGTCTGCACTTTCACTTTTTGTGACCACAAAACCCGAAATCAATGCGACGTTGCGTGCGCCTCTTATCCACTCGCAATTCCCCACAATCCTCGTTGTTGTTCGCCCAACCGCTCCGCCTTTCATTCCCATTCCTTCCCCTACAAACGCCTCGCCTCCCTTCCCCCTCGTCTTCTTCAATTCATGACAACGCCCCCTTTTCGATCCCGATCATCTCGTTCTTCAATATCCTATACAATCATCTTATCCCCACTTCAATTTCCCACAATTTCCCACCAACCCCACTTCCCAATTCCTCTTACCCTCTTCAATCCAAGCGATTTCAAGAGATTTGTCCTCGATTTTAATGGCCGACGCTCTCAGCAAGATCAGTTTTTCCCCCTCCCGCCCTTCCTTTTCTCCTCACCATCTTCCTCCGCCGATTTATGGCCTTAAATCTGTCATTTCTTCTTCGAATCCCTCGACTTGGAAACGGCTTTCTCTGAAATTACCATCCGCTTCGCTGTCTTTTTCGAGCCGTGACTCCTATGGCGGAAGAATTGAGTTTAGAGAAGCTAAGGGCATCTCCAGGAATTCTACTTCTCCTACACGGTCTTCGACGATATCCCATGTTGGTACCTGTATTCTTCACATCCTTGTGTTTTTTTCCCTTTCCTATGATATTAAGGTTTTTGTTTCTAACATTCAGCTTTTTCTGTCATTTTATTATATGTTTCCCCTCGTTGGATTTTCTTTATAAATTTATTTGTCTCATTAGGTTCTCTGTGTTTCATTTTATTGGATTCTGAATGGGAAACTTAGCTGTGTCTTGTTGTTTGTGATCTGGGTTACTATGAACAGAACTAGTTACTGTATCCCTATGTTTGCTTATCCTTGATTAGCACTTGATTATGTCCGTAATCTATTGTCCATTTTGTTTGTTAACTCTTGTGTTGGTGTTTAATAGAGTGGGTTTCGAACTCCAAAAGCTCAGAAATGGTGGGAAAAGGGGTTAGAAGCTAATATGAAAGAGGTGAGCAGTGCACAGGAGCTTGTGGATTCTCTTTTAAATGCCGGGGACAAGCTTGTTATTGTGGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCAAAGGTCTCCTTTATGCTTTATTGTGTAGAAAGAACAATGTGTATGTTCCAAGTTTTACAAGTCTTGAAAAGGTTCGTATATCTATCCTCTGCAGATATGCCAATTTGCTGAGATGAATCCAGAAATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCTATGTGTTATAGTCTTGGTGTGCATGTGTTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACTAATGCAACGGTAACAAATCTTTAAATACATTGGAACTCTTCTGCTTTTGTAATGTTATCCTATCATTATCATTCATAATATTGATTGTGGCTGTACATTCTTTTATAGAAGCATGCTATTCCTTTATTTCCATTTTAATTGTCATTTAATCAGAAGTGAGATCCCACGTCGGTTGGAGTGGGAAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTAGCAGACGCGTTTTAAAACTGTGAGGTTGACGGCGATACGTAATGGGCCAAAGCGGACAATATCTATTAGCGGTGAGTTTAGGTTGTTACAAATGGTATTAGAGCCAGACACTAGATGGTGCGCCAGCGAGAACGGTGGGTCCCGAAAGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGAGGAACGAAACATTATTTATAAAGGTGTGGAAACCTCTCCCTAGCATACGCAGTTTAAAGCCGTGAGGCTAACGGGCCAAAGCGGACGATATCTGATGGGTTTAGGTTGTTATAATTTTAGTCGAAGTAGATATGTTTGTGCTTTAAGTATCAAATCTCCTATTGTGGTTTATTTGCCAAGAGATGTCCATTTAACCGGCCCGGTAGAGAATCTCCGCTTAAACATAGAATGGGGGAGGGAGGGAGAGATATTTCTCCCTCTTGATTAAATGGGGCCTATGACAGAGATTATGTTTCCCATCCCTAATGAGAATTTTGCGGGGATGGAGATGGAAATAGTACAGACGTCTCTATGTCTCTTCTACATCTGCCTCATGAGTATCAAATGTGTGCTTTGTCTCTACTAGTTTACGTGTTATTGTAGATGGTAGAGTGATAAAAAATTGGTTTGGTATGACAGATGAAGAAATTCAAGGATGCATTAGCCAAGCACAACACAGACCGATGCAGCCTCGGCCCGACCCGAGGGTTGGAGGAGAAAGAACTCATGGCACTTGCCGCTAACAGAGAACTCTGTTTCAACTACACCCCAAAAGCAGCAGAAGAGGTCCCTATCCCCATCACCATCCATGCCCGTGCCCATGCTGGAAGTGTAAAAATATCAGAATCAGAGCCATCGCGTCTTCCTCTACCCTCAACCATCCTGAAGTCTGCTGCTCAAACCTCCAAGGGCAATGCCTATGTGGGATGAAGCATCCTATCCTATCCTTAATACCTGTGCTCTTCTTGCCTGTAAAGATAAAATAGATGCACCAAATTTGTAGGGTTTTCTTTTTTGGCTTGGATCCCTACCTCTGCTGTGTGATTAATATTTATACATATATAGTCTTACCCGTTGTCTCTCCACGGTTGTATAAACCTTCTCTGCAAAGTTATGAATACAGAGCTTGTGAAAGATTGTAATTACTCAAATAATCAAGAAACTTATGAGTACCACTCATATGATTCAATGATATCAACTTCTTTAACCAC

mRNA sequence

ATTGACTAAAGCATGATTTTTTTCAAAGAAAGTTTGAATTTTAGAGGCAAGGAATATATAGATGTGGTCAATGGCTTCGTCTGCACTTTCACTTTTTGTGACCACAAAACCCGAAATCAATGCGACGTTGCGTGCGCCTCTTATCCACTCGCAATTCCCCACAATCCTCGTTGTTGTTCGCCCAACCGCTCCGCCTTTCATTCCCATTCCTTCCCCTACAAACGCCTCGCCTCCCTTCCCCCTCGTCTTCTTCAATTCATGACAACGCCCCCTTTTCGATCCCGATCATCTCGTTCTTCAATATCCTATACAATCATCTTATCCCCACTTCAATTTCCCACAATTTCCCACCAACCCCACTTCCCAATTCCTCTTACCCTCTTCAATCCAAGCGATTTCAAGAGATTTGTCCTCGATTTTAATGGCCGACGCTCTCAGCAAGATCAGTTTTTCCCCCTCCCGCCCTTCCTTTTCTCCTCACCATCTTCCTCCGCCGATTTATGGCCTTAAATCTGTCATTTCTTCTTCGAATCCCTCGACTTGGAAACGGCTTTCTCTGAAATTACCATCCGCTTCGCTGTCTTTTTCGAGCCGTGACTCCTATGGCGGAAGAATTGAGTTTAGAGAAGCTAAGGGCATCTCCAGGAATTCTACTTCTCCTACACGGTCTTCGACGATATCCCATAGTGGGTTTCGAACTCCAAAAGCTCAGAAATGGTGGGAAAAGGGGTTAGAAGCTAATATGAAAGAGGTGAGCAGTGCACAGGAGCTTGTGGATTCTCTTTTAAATGCCGGGGACAAGCTTGTTATTGTGGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCAAAGATATGCCAATTTGCTGAGATGAATCCAGAAATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCTATGTGTTATAGTCTTGGTGTGCATGTGTTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACTAATGCAACGATGAAGAAATTCAAGGATGCATTAGCCAAGCACAACACAGACCGATGCAGCCTCGGCCCGACCCGAGGGTTGGAGGAGAAAGAACTCATGGCACTTGCCGCTAACAGAGAACTCTGTTTCAACTACACCCCAAAAGCAGCAGAAGAGGTCCCTATCCCCATCACCATCCATGCCCGTGCCCATGCTGGAAGTGTAAAAATATCAGAATCAGAGCCATCGCGTCTTCCTCTACCCTCAACCATCCTGAAGTCTGCTGCTCAAACCTCCAAGGGCAATGCCTATGTGGGATGAAGCATCCTATCCTATCCTTAATACCTGTGCTCTTCTTGCCTGTAAAGATAAAATAGATGCACCAAATTTGTAGGGTTTTCTTTTTTGGCTTGGATCCCTACCTCTGCTGTGTGATTAATATTTATACATATATAGTCTTACCCGTTGTCTCTCCACGGTTGTATAAACCTTCTCTGCAAAGTTATGAATACAGAGCTTGTGAAAGATTGTAATTACTCAAATAATCAAGAAACTTATGAGTACCACTCATATGATTCAATGATATCAACTTCTTTAACCAC

Coding sequence (CDS)

ATGGCCGACGCTCTCAGCAAGATCAGTTTTTCCCCCTCCCGCCCTTCCTTTTCTCCTCACCATCTTCCTCCGCCGATTTATGGCCTTAAATCTGTCATTTCTTCTTCGAATCCCTCGACTTGGAAACGGCTTTCTCTGAAATTACCATCCGCTTCGCTGTCTTTTTCGAGCCGTGACTCCTATGGCGGAAGAATTGAGTTTAGAGAAGCTAAGGGCATCTCCAGGAATTCTACTTCTCCTACACGGTCTTCGACGATATCCCATAGTGGGTTTCGAACTCCAAAAGCTCAGAAATGGTGGGAAAAGGGGTTAGAAGCTAATATGAAAGAGGTGAGCAGTGCACAGGAGCTTGTGGATTCTCTTTTAAATGCCGGGGACAAGCTTGTTATTGTGGATTTCTTCTCCCCTGGTTGTGGTGGCTGCAAAGCTCTTCACCCAAAGATATGCCAATTTGCTGAGATGAATCCAGAAATCCAATTTTTGCAAGTGAACTATGAAGAGCACAAATCTATGTGTTATAGTCTTGGTGTGCATGTGTTGCCCTTCTTTCGCTTCTACAGAGGTGCTCAGGGTCGTGTTTGCAGCTTTAGCTGTACTAATGCAACGATGAAGAAATTCAAGGATGCATTAGCCAAGCACAACACAGACCGATGCAGCCTCGGCCCGACCCGAGGGTTGGAGGAGAAAGAACTCATGGCACTTGCCGCTAACAGAGAACTCTGTTTCAACTACACCCCAAAAGCAGCAGAAGAGGTCCCTATCCCCATCACCATCCATGCCCGTGCCCATGCTGGAAGTGTAAAAATATCAGAATCAGAGCCATCGCGTCTTCCTCTACCCTCAACCATCCTGAAGTCTGCTGCTCAAACCTCCAAGGGCAATGCCTATGTGGGATGA

Protein sequence

MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG

Homology

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy Swiss-Prot
Match: O64654 (Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.3e-80
Identity = 160/254 (62.99%), Postives = 189/254 (74.41%), Query Frame = 0


Query: 35  SSNPSTWKRLSLKLPSASLSFSSRDS-----YGGRIEFREAKGIS-RNSTSPTRSSTISH 94
           S +P ++    LK   + L   S+       YG +I F +++  S R S++ T  +T+  
Sbjct: 25  SFSPVSFGGFGLKKSFSCLKLKSQKPLRSVFYGKQIVFGDSQDESFRRSSAITAQTTL-- 84

Query: 95  SGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKI 154
              R   AQKWWEKGL+ NM+E+SSAQELVDSL NAGDKLV+VDFFSPGCGGCKALHPKI
Sbjct: 85  ---RIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKI 144

Query: 155 CQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKD 214
           CQFAEMNP++QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QGRVCSFSCTNAT+KKF+D
Sbjct: 145 CQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRD 204

Query: 215 ALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVK 274
           ALAKH  DRCSLGPT+GLEEKEL+ALAAN+EL F YTPK     P+P+   A        
Sbjct: 205 ALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPK-----PVPVEKEAAT------ 261

Query: 275 ISESEPS-RLPLPS 282
             +S PS  +PLPS
Sbjct: 265 -PDSNPSLPVPLPS 261

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.1e-74
Identity = 144/232 (62.07%), Postives = 171/232 (73.71%), Query Frame = 0


Query: 43  RLSLKLPSASLSFSSRDSYGGR---IEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKW 102
           R++    +++L    R  + GR   +  R ++ + RN  +P + +          KA KW
Sbjct: 34  RMAAAAATSALRIGRRSPFLGRRLAVGPRRSRPVPRNLVAPVQMN------LAFAKATKW 93

Query: 103 WEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQ 162
           WEKGL+ NM+EV SAQ+LVDSL NAGD LVIVDFFSPGCGGC+ALHPKICQ AE NP++ 
Sbjct: 94  WEKGLQPNMREVESAQDLVDSLTNAGDNLVIVDFFSPGCGGCRALHPKICQIAEQNPDVL 153

Query: 163 FLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCS 222
           FLQVNYEEHKSMCYSL VHVLPFFRFYRGAQGR+CSFSCTNAT+KKF+DALAKH  DRCS
Sbjct: 154 FLQVNYEEHKSMCYSLHVHVLPFFRFYRGAQGRLCSFSCTNATIKKFRDALAKHKPDRCS 213

Query: 223 LGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHAR-AHAGSVKIS 271
           LGPTRGLEE EL+ALAAN++L FNYT K  E VP      A+    GS K+S
Sbjct: 214 LGPTRGLEESELLALAANKDLQFNYT-KKPELVPSGDAAAAQELDRGSTKLS 258

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy Swiss-Prot
Match: Q6Z4N3 (Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0684100 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-69
Identity = 141/243 (58.02%), Postives = 170/243 (69.96%), Query Frame = 0


Query: 55  FSSRDSY-GGRIEF--REAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEV 114
           +SS+ ++  GR+    R+A+ + RN  +      ++       KA +WWEK L+ NM+E+
Sbjct: 44  YSSKSTFPSGRVALTERKARPLPRNLEAAHGQMNLT-----IGKAMRWWEKCLQPNMREI 103

Query: 115 SSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSM 174
            SAQ+L DSLLNAGDKLV+VDFFSPGCGGC+ALHPKI Q AE NPE+ FLQVNYE+HKSM
Sbjct: 104 ESAQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPEVLFLQVNYEKHKSM 163

Query: 175 CYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKEL 234
           CYSL VHVLPFFRFYRGAQGRV SFSCTNAT+KKFKDALAKH  DRC LGP +GLEE EL
Sbjct: 164 CYSLHVHVLPFFRFYRGAQGRVSSFSCTNATIKKFKDALAKHGPDRCGLGPAKGLEESEL 223

Query: 235 MALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTS 294
           MALA NR+L F YTP   + VPI   +   A A            LPLP+T  +   Q S
Sbjct: 224 MALAINRDLNFTYTPN-QDLVPIADALLKEAAAPG-------GPWLPLPATATQLFIQGS 273

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.8e-65
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 97  QKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNP 156
           QKWWEK L+ NMK V+S Q+LV SL NAGDKLV+VDFFSP CGGCKALHPKIC+ AE NP
Sbjct: 84  QKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNP 143

Query: 157 EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTD 216
           E++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GRVCSFSCTNAT++KFK+AL KH  +
Sbjct: 144 EVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGRE 203

Query: 217 RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEV 253
           +CS+G T+GLEEKEL+A+AAN++L F+Y P +   +
Sbjct: 204 QCSIGETKGLEEKELVAMAANKDLSFDYKPTSCGNI 239

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy Swiss-Prot
Match: Q9XFI1 (Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440 PE=2 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.2e-56
Identity = 111/218 (50.92%), Postives = 145/218 (66.51%), Query Frame = 0


Query: 28  GLKSVISSSNPSTWKRLSLKLPSASLSFSSRDSYGGRIEF--REAKGISRNSTSPTRSST 87
           G   V+S  +P + +  S    S  +S   ++      +F  +     S +S SP ++ T
Sbjct: 8   GTNCVLSGVSPFSQENQSKSKLSPFMSLDLKEHPMASADFTNQTLTAFSSSSASPFQAKT 67

Query: 88  ISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALH 147
              S     +  +WWEK    NM E+ SA  LVDSLLNAGD+LV++DF+SPGCGGCK+LH
Sbjct: 68  ---SSIGMSRGMRWWEKSTNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLH 127

Query: 148 PKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKK 207
           PKICQ AE NP + FL+VN EE ++MC+ L VHVLPFF+FYRGA+G+VCSFSCT AT+ K
Sbjct: 128 PKICQLAETNPNVMFLKVNQEELRTMCHGLNVHVLPFFKFYRGAEGKVCSFSCTIATINK 187

Query: 208 FKDALAKHNTDRCSLGPTRGLEEKELMALAANRELCFN 244
           FK AL KH ++RCSLG  +GL+EKEL ALA+  EL  N
Sbjct: 188 FKKALDKHGSERCSLGDAKGLDEKELAALASVGELKMN 222

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: XP_023540711.1 (thioredoxin-like 1-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 597 bits (1538), Expect = 4.37e-215
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS
Sbjct: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL
Sbjct: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240

Query: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG 298
           CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG
Sbjct: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG 298

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: XP_022932707.1 (thioredoxin-like 1-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 588 bits (1515), Expect = 1.45e-211
Identity = 295/299 (98.66%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA+ELVDS
Sbjct: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAEELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGRVCSFSCTNAT+KKFKDALAKHNT+RCSLGPTRGLEEKELMALAANREL
Sbjct: 181 PFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTERCSLGPTRGLEEKELMALAANREL 240

Query: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTIL-KSAAQTSKGNAYVG 298
           CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTIL KSAAQTSKGNAYVG
Sbjct: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILLKSAAQTSKGNAYVG 299

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: KAG6597713.1 (Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 587 bits (1512), Expect = 4.66e-211
Identity = 295/302 (97.68%), Postives = 298/302 (98.68%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA+ELVDS
Sbjct: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAEELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGRVCSFSCTNAT+KKFKDALAKHNT+RCSLGPTRGLEEKELMALAANREL
Sbjct: 181 PFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTERCSLGPTRGLEEKELMALAANREL 240

Query: 241 CFNYTPKAAEEVPIPI----TIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAY 298
           CFNYTPKAAEEVPIPI    TIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAY
Sbjct: 241 CFNYTPKAAEEVPIPIPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAY 300

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: XP_022972248.1 (thioredoxin-like 1-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 582 bits (1499), Expect = 3.85e-209
Identity = 290/298 (97.32%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YG RI+FREAK ISRNSTSPTRSSTISHSGFRTPKAQKWWE+GLEANMKEVSSA+ELVDS
Sbjct: 61  YGERIQFREAKVISRNSTSPTRSSTISHSGFRTPKAQKWWERGLEANMKEVSSAEELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGRVCSFSCTNAT+KKFKDALAKHNTDRCSLGPTRGLEEKEL+ALAANREL
Sbjct: 181 PFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTDRCSLGPTRGLEEKELVALAANREL 240

Query: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG 298
           CFNYTPKAAEEVPIPITIH RAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG
Sbjct: 241 CFNYTPKAAEEVPIPITIHPRAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG 298

[Close]

BLAST of Cp4.1LG08g06650 vs. NCBI nr
Match: KAG7029160.1 (Thioredoxin-like 1-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 576 bits (1484), Expect = 1.81e-206
Identity = 294/322 (91.30%), Postives = 297/322 (92.24%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA+ELVDS
Sbjct: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAEELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPK------------------------ICQFAEMNP 180
           LLNAGDKLVIVDFFSPGCGGCKALHPK                        ICQFAEMNP
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKVSFMLYCVERTMCMFQVLQVLKRLICQFAEMNP 180

Query: 181 EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTD 240
           EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNAT+KKFKDALAKHNT+
Sbjct: 181 EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTE 240

Query: 241 RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR 298
           RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHA SVKISESEPSR
Sbjct: 241 RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHARSVKISESEPSR 300

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy TrEMBL
Match: A0A6J1EXI9 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439173 PE=4 SV=1)

HSP 1 Score: 588 bits (1515), Expect = 7.04e-212
Identity = 295/299 (98.66%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA+ELVDS
Sbjct: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAEELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGRVCSFSCTNAT+KKFKDALAKHNT+RCSLGPTRGLEEKELMALAANREL
Sbjct: 181 PFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTERCSLGPTRGLEEKELMALAANREL 240

Query: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTIL-KSAAQTSKGNAYVG 298
           CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTIL KSAAQTSKGNAYVG
Sbjct: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILLKSAAQTSKGNAYVG 299

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy TrEMBL
Match: A0A6J1I9C0 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470833 PE=4 SV=1)

HSP 1 Score: 582 bits (1499), Expect = 1.86e-209
Identity = 290/298 (97.32%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS
Sbjct: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
           YG RI+FREAK ISRNSTSPTRSSTISHSGFRTPKAQKWWE+GLEANMKEVSSA+ELVDS
Sbjct: 61  YGERIQFREAKVISRNSTSPTRSSTISHSGFRTPKAQKWWERGLEANMKEVSSAEELVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGRVCSFSCTNAT+KKFKDALAKHNTDRCSLGPTRGLEEKEL+ALAANREL
Sbjct: 181 PFFRFYRGAQGRVCSFSCTNATIKKFKDALAKHNTDRCSLGPTRGLEEKELVALAANREL 240

Query: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG 298
           CFNYTPKAAEEVPIPITIH RAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG
Sbjct: 241 CFNYTPKAAEEVPIPITIHPRAHAGSVKISESEPSRLPLPSTILKSAAQTSKGNAYVG 298

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy TrEMBL
Match: A0A0A0LD91 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 2.38e-143
Identity = 227/313 (72.52%), Postives = 244/313 (77.96%), Query Frame = 0


Query: 1   MADALSKISF-SPSRPSFSP-----HHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLS 60
           MADALSKI+F +P  PS S      H L  P    KSV SSS+P  WKR+S+KLPS S  
Sbjct: 1   MADALSKIAFLAPFPPSSSSSHRHLHRLSLPFSEFKSVDSSSHPFNWKRISVKLPSTSGP 60

Query: 61  FSSRDSYGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSA 120
           FSS  SYG RIE  E     RNS SP RSSTISHSGFR PKAQKWWEKGL+ NMKEV+ A
Sbjct: 61  FSSSYSYGRRIESTE-----RNSVSPPRSSTISHSGFRIPKAQKWWEKGLQPNMKEVTGA 120

Query: 121 QELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYS 180
            + VDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEM P+IQFLQVNYEEHKSMCYS
Sbjct: 121 HDFVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMYPDIQFLQVNYEEHKSMCYS 180

Query: 181 LGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMAL 240
           LGVHVLPFFRFYRGAQGR+CSFSCTNAT+KKFKDALAKHNTDRCSLGPT+GLEEK+L AL
Sbjct: 181 LGVHVLPFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTDRCSLGPTQGLEEKDLAAL 240

Query: 241 AANRELCFNYTPKAAEEVPIPITIHAR--AHAGSVKISESEPSR-------LPLPSTILK 298
           AAN+EL F+YTPK AEEVPI I I     A  G V+ SESE SR       LPL STILK
Sbjct: 241 AANKELSFDYTPKPAEEVPISIAIPIPIPATVGGVRTSESERSRSDVGQLPLPLSSTILK 300

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy TrEMBL
Match: A0A6J1DP71 (thioredoxin-like 1-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022913 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 2.42e-141
Identity = 223/314 (71.02%), Postives = 247/314 (78.66%), Query Frame = 0


Query: 1   MADALSKISFSP-SRPSFSPHHLPPPIYGLKSVISSSNPS---TWKRLSLKLPSASLSFS 60
           MADALSK +F P SR   S  HLPPP+  LKSV +SS+ S    W+RL +KLPS S  FS
Sbjct: 1   MADALSKTNFPPPSRSYSSSRHLPPPVCCLKSVAASSSSSRSLNWQRLFVKLPSTSRPFS 60

Query: 61  SRDSYGGRIEFREAKG-ISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQ 120
           S DSYG  I+FREAKG +S +  SP R ST SHSG R PKAQKWWEKGL+ NMKEV+ A 
Sbjct: 61  SGDSYGRGIDFREAKGALSESYVSPARFSTTSHSGLRIPKAQKWWEKGLQPNMKEVTGAH 120

Query: 121 ELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSL 180
           +LV+SLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNP++QFLQVNYEEHKSMCYSL
Sbjct: 121 DLVESLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSL 180

Query: 181 GVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALA 240
           GVHVLPFFRFYRGA GR+CSFSCTN T+KKFKDALAKHNTDRCS+GPT+GLEEKEL+ALA
Sbjct: 181 GVHVLPFFRFYRGAHGRLCSFSCTNVTIKKFKDALAKHNTDRCSIGPTKGLEEKELVALA 240

Query: 241 ANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR-----------LPLPSTIL 298
            N+EL F+YTPK AEEVP   T+   A    VKI ESEPSR           LP PST +
Sbjct: 241 VNKELSFSYTPKPAEEVPG--TVLVPAPLSGVKI-ESEPSRSELEQLPLPIPLPPPSTRI 300

[Close]

BLAST of Cp4.1LG08g06650 vs. ExPASy TrEMBL
Match: A0A6J1EYA1 (thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111439903 PE=4 SV=1)

HSP 1 Score: 407 bits (1047), Expect = 1.17e-140
Identity = 220/305 (72.13%), Postives = 244/305 (80.00%), Query Frame = 0


Query: 1   MADALSKISFSPSRPSFSPHHLPPPIYGLKSVISSSNPSTWKRLSLKLPSASLSFSSRDS 60
           MADA+S ISF+PS  S   +HLPPPI  LKS+ SSS P   +RLS+KLPS    FS  DS
Sbjct: 1   MADAVSNISFAPSLRSS--NHLPPPISALKSLNSSSYPLNCQRLSVKLPSTLRPFSISDS 60

Query: 61  YGGRIEFREAKGISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDS 120
               IEF EA+ ISRNS SPTRSST   SGFR PKAQKWW+KGL+ NMK+V+ AQ+ VDS
Sbjct: 61  NSQIIEFTEARDISRNSVSPTRSST---SGFRVPKAQKWWDKGLQPNMKDVTGAQDFVDS 120

Query: 121 LLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVL 180
           LL+AGDKLVIV FFSPGCGGCKALHPK+CQFAEM P+IQFLQVNYEEHKSMCYSLGVHVL
Sbjct: 121 LLSAGDKLVIVIFFSPGCGGCKALHPKMCQFAEMYPDIQFLQVNYEEHKSMCYSLGVHVL 180

Query: 181 PFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANREL 240
           PFFRFYRGAQGR+CSFSCTNAT+KKFKDALAKHNT+RCSLGPT+GLEEK+L+ALAANREL
Sbjct: 181 PFFRFYRGAQGRLCSFSCTNATIKKFKDALAKHNTERCSLGPTQGLEEKDLVALAANREL 240

Query: 241 CFNYTPKAAEEVPIPITIHARAHAGSVKISESEPSR-------LPLPSTILKSAAQTSKG 298
            FNYTPK AEEVP+PI     A  G + ISE + SR       LPLPST LKS    SK 
Sbjct: 241 SFNYTPKPAEEVPMPIP----ATVGGLGISELDKSRSDSEQPPLPLPSTFLKSG-HVSKE 295

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR 10
Match: AT1G08570.1 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 301.2 bits (770), Expect = 9.1e-82
Identity = 160/254 (62.99%), Postives = 189/254 (74.41%), Query Frame = 0


Query: 35  SSNPSTWKRLSLKLPSASLSFSSRDS-----YGGRIEFREAKGIS-RNSTSPTRSSTISH 94
           S +P ++    LK   + L   S+       YG +I F +++  S R S++ T  +T+  
Sbjct: 25  SFSPVSFGGFGLKKSFSCLKLKSQKPLRSVFYGKQIVFGDSQDESFRRSSAITAQTTL-- 84

Query: 95  SGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKI 154
              R   AQKWWEKGL+ NM+E+SSAQELVDSL NAGDKLV+VDFFSPGCGGCKALHPKI
Sbjct: 85  ---RIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKI 144

Query: 155 CQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKD 214
           CQFAEMNP++QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QGRVCSFSCTNAT+KKF+D
Sbjct: 145 CQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRD 204

Query: 215 ALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVK 274
           ALAKH  DRCSLGPT+GLEEKEL+ALAAN+EL F YTPK     P+P+   A        
Sbjct: 205 ALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPK-----PVPVEKEAAT------ 261

Query: 275 ISESEPS-RLPLPS 282
             +S PS  +PLPS
Sbjct: 265 -PDSNPSLPVPLPS 261

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR 10
Match: AT1G08570.2 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 299.7 bits (766), Expect = 2.7e-81
Identity = 148/211 (70.14%), Postives = 170/211 (80.57%), Query Frame = 0


Query: 72  GISRNSTSPTRSSTISHSGFRTPKAQKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIV 131
           G S++ +    S+  + +  R   AQKWWEKGL+ NM+E+SSAQELVDSL NAGDKLV+V
Sbjct: 32  GDSQDESFRRSSAITAQTTLRIGTAQKWWEKGLKDNMREISSAQELVDSLTNAGDKLVVV 91

Query: 132 DFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQG 191
           DFFSPGCGGCKALHPKICQFAEMNP++QFLQVNYEEHKSMCYSLGVHVLPFFRFYRG+QG
Sbjct: 92  DFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGSQG 151

Query: 192 RVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLEEKELMALAANRELCFNYTPKAAEE 251
           RVCSFSCTNAT+KKF+DALAKH  DRCSLGPT+GLEEKEL+ALAAN+EL F YTPK    
Sbjct: 152 RVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLEEKELVALAANKELNFTYTPK---- 211

Query: 252 VPIPITIHARAHAGSVKISESEPS-RLPLPS 282
            P+P+   A          +S PS  +PLPS
Sbjct: 212 -PVPVEKEAAT-------PDSNPSLPVPLPS 230

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR 10
Match: AT1G08570.3 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 275.8 bits (704), Expect = 4.1e-74
Identity = 134/175 (76.57%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 108 MKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEE 167
           M+E+SSAQELVDSL NAGDKLV+VDFFSPGCGGCKALHPKICQFAEMNP++QFLQVNYEE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 168 HKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLE 227
           HKSMCYSLGVHVLPFFRFYRG+QGRVCSFSCTNAT+KKF+DALAKH  DRCSLGPT+GLE
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLE 120

Query: 228 EKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPS-RLPLPS 282
           EKEL+ALAAN+EL F YTPK     P+P+   A          +S PS  +PLPS
Sbjct: 121 EKELVALAANKELNFTYTPK-----PVPVEKEAAT-------PDSNPSLPVPLPS 163

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR 10
Match: AT1G08570.4 (atypical CYS HIS rich thioredoxin 4 )

HSP 1 Score: 275.8 bits (704), Expect = 4.1e-74
Identity = 134/175 (76.57%), Postives = 149/175 (85.14%), Query Frame = 0


Query: 108 MKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPEIQFLQVNYEE 167
           M+E+SSAQELVDSL NAGDKLV+VDFFSPGCGGCKALHPKICQFAEMNP++QFLQVNYEE
Sbjct: 1   MREISSAQELVDSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEE 60

Query: 168 HKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTDRCSLGPTRGLE 227
           HKSMCYSLGVHVLPFFRFYRG+QGRVCSFSCTNAT+KKF+DALAKH  DRCSLGPT+GLE
Sbjct: 61  HKSMCYSLGVHVLPFFRFYRGSQGRVCSFSCTNATIKKFRDALAKHGPDRCSLGPTKGLE 120

Query: 228 EKELMALAANRELCFNYTPKAAEEVPIPITIHARAHAGSVKISESEPS-RLPLPS 282
           EKEL+ALAAN+EL F YTPK     P+P+   A          +S PS  +PLPS
Sbjct: 121 EKELVALAANKELNFTYTPK-----PVPVEKEAAT-------PDSNPSLPVPLPS 163

[Close]

BLAST of Cp4.1LG08g06650 vs. TAIR 10
Match: AT2G33270.1 (atypical CYS HIS rich thioredoxin 3 )

HSP 1 Score: 249.2 bits (635), Expect = 4.1e-66
Identity = 109/156 (69.87%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 97  QKWWEKGLEANMKEVSSAQELVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNP 156
           QKWWEK L+ NMK V+S Q+LV SL NAGDKLV+VDFFSP CGGCKALHPKIC+ AE NP
Sbjct: 84  QKWWEKELKPNMKSVTSPQDLVVSLRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNP 143

Query: 157 EIQFLQVNYEEHKSMCYSLGVHVLPFFRFYRGAQGRVCSFSCTNATMKKFKDALAKHNTD 216
           E++FLQVNYEEH+S+C SL +HVLPFFRFYRG+ GRVCSFSCTNAT++KFK+AL KH  +
Sbjct: 144 EVEFLQVNYEEHRSLCQSLNIHVLPFFRFYRGSSGRVCSFSCTNATIRKFKEALEKHGRE 203

Query: 217 RCSLGPTRGLEEKELMALAANRELCFNYTPKAAEEV 253
           +CS+G T+GLEEKEL+A+AAN++L F+Y P +   +
Sbjct: 204 QCSIGETKGLEEKELVAMAANKDLSFDYKPTSCGNI 239

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64654	1.3e-80	62.99	Thioredoxin-like 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g08570...	[more]
Q10M18	3.1e-74	62.07	Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q6Z4N3	1.0e-69	58.02	Thioredoxin-like 1-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
O22779	5.8e-65	69.87	Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270...	[more]
Q9XFI1	2.2e-56	50.92	Thioredoxin-like 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g61440...	[more]

BLAST of Cp4.1LG08g06650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540711.1	4.37e-215	100.00	thioredoxin-like 1-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022932707.1	1.45e-211	98.66	thioredoxin-like 1-1, chloroplastic [Cucurbita moschata]	[more]
KAG6597713.1	4.66e-211	97.68	Thioredoxin-like 1-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022972248.1	3.85e-209	97.32	thioredoxin-like 1-1, chloroplastic [Cucurbita maxima]	[more]
KAG7029160.1	1.81e-206	91.30	Thioredoxin-like 1-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG08g06650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EXI9	7.04e-212	98.66	thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143917...	[more]
A0A6J1I9C0	1.86e-209	97.32	thioredoxin-like 1-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470833 ...	[more]
A0A0A0LD91	2.38e-143	72.52	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G844860...	[more]
A0A6J1DP71	2.42e-141	71.02	thioredoxin-like 1-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110229...	[more]
A0A6J1EYA1	1.17e-140	72.13	thioredoxin-like 1-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143990...	[more]

BLAST of Cp4.1LG08g06650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08570.1	9.1e-82	62.99	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.2	2.7e-81	70.14	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.3	4.1e-74	76.57	atypical CYS HIS rich thioredoxin 4	[more]
AT1G08570.4	4.1e-74	76.57	atypical CYS HIS rich thioredoxin 4	[more]
AT2G33270.1	4.1e-66	69.87	atypical CYS HIS rich thioredoxin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 119..196 e-value: 1.4E-13 score: 50.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 87..215 score: 9.867662
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 96..220 e-value: 1.5E-18 score: 68.7
None	No IPR available	PANTHER	PTHR43601:SF9	THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC	coord: 47..289
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 47..289
None	No IPR available	CDD	cd02947	TRX_family	coord: 124..211 e-value: 4.3009E-18 score: 75.6724
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 97..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06650.1	Cp4.1LG08g06650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast