Cp4.1LG08g05960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g05960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Eukaryotic translation initiation factor 3 subunit H
Location	Cp4.1LG08: 551711 .. 556307 (+)
RNA-Seq Expression	Cp4.1LG08g05960
Synteny	Cp4.1LG08g05960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACATATTCGGCCCATTTAACCCAAACTGGGCCCACAGTGGGAGTTGTTTCTTCTCTTGCCCATCACCGGACTGTGCTGCCGCTGGTAGGGTTTATTCACAAACTCTCGTACTTTCGCACCTCTGAAAGACGCGCGAAGCCGCTTCTGCGATTCAATTCAGCTCTTTCTTCCATCATCCTCGAGCTTTGCGAATCGCTGATCATGGCAAACAGTATGTATAACGCCTCTTTTGCTTCTCTTGCTTGTCGTTCGTTCGTTTGAATTTTGATTTGGAAGTATGATTTTGGGCTTGTTTCGTTGTTGATGAATGCGTTTGTGGTGGTGCAGCAATGGCTAGATCTTTTCTGCAGGTCGCCGTCACGGAAGAGGTGGCTTCCCCACTCCGAGTTGTTCAGATTGAAGGCTTGGTAATTTTTTCCTGTTCTTTTTCTTGTTTTGCGTTTGGTTTAGATTGAACTAATTAGAACTAATTCGTGTTATTAATTCGTCCACCACATAAACAAAACGGAAGTTTTCATTTCATACGTTCGGTAATTTTTTTATAACACAGTAATTCAGAGGATACTTTATTGTTTGTTCGAAGGTTACTGGGTTCTTTTAGTGGTTGCGACGGAGTGCTTAGCGTTATACAACGCTATTTTCCATTTTCCATTTGATAATTAGTTTGCCTTCCAATTAGGATTCAGAATTATTGTACTTTCGGTTTTGCCACATTCCTGTCGCGGCTGTATTCTTACCGGAGGAAAAATGATTATATTTGAGGCTTTGGTTTGTTATATAGGGCGAGCAATTAGTGAGGACAAGTGTTTTGAACTTTTTTTATTTTCTTGAATTCTGGTCTTGTACCCCTATGTGAAGGTAAAAACCTTTTGTGTCAACTCTACAGGTTATACTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCCTCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTTACCAATTGCTTTCCCTTCCCGGTATGAGGAGGCAGTTTGTTTTGTGTTTTGTTTTATGGTTCAGGGATTTTGTTATACTCTTAAACCTCTTCTAATTTATTAACTTGTATCTGTTAGACACGAGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAACACTGTTGGATGGTAAGCTTACGTTTATAATAGTGTATGTACATGGTGGACTTGGCATTATTAGTGGACAAATAATGTGTATATGCATGTATGTTTGTTCTGTTCATATGCATTCACTTGTTTTCTATATGGTTTATTTTTTTACCCTCCATACGTTATAATTTCTTTTTTGTTGCTCATCTANTTTTTTTTTTTTTTTTGGATTTTGAAATAGAATAGTATGCAGTTGGTACTATTTTACTTTTGTCCAACTATTGGAGGTTATGGTCCATGCCTGAAACCTGACTTTCAACTAGTCATTAGAACTGTTCTCTATTGTCTTGGTTGTATGCAAACATTTTTATTTTGTGAGTTTGGGATGTATGAGTGTAAGGTTAATGCTTCATATGGGTGTTCCTTTGGCTACATCAATACTGAAAAAAGTGTTCTGTTCCTTGGCCTCGATGATATGTTAATACACCCACCCTGCTGTGTTGGTGGAGCTCTTTGGCTGTATTGGTTGACTTTATTGAAAAATGAACTTAGAGTGAAGCTACTTTATTCCCATTGTTCATGTGGAGTGGTTGACATTTTATTTAATCATATTCAGGTACCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGTTGATTGAGACCTTTATGAATTATCAGGTATTAGTTTAGTCACTCTCTTATTTATATGTTGTTCTTTATAGAATTCTTGCAATGATTTCTCTATTCATGGTTACTAAGTTCCACTTTATATATATTCGTTAACTCAAAAATTGAGAACTTCAAATTTTAAGGCGTTATATGTGTTCATATGCGTTAAATGTGAAATTTTGGTCAACTACAGAGTTTTTGAATCTCTTTTCTTTCTGTGTCTGGCTATTTTATTTGCTGTTTTGATCTGTTGTGGAAATTCTTGTGACAAGTTGGAAGTAGAAGGCTTCTTCCAGTGCCTTGCTTCCTTCTTGAGTATAGAAAGGAAGATCTTCCTTCTGAACTGCCTTTGCAAGGCCGGAATTATTTTGTTTCAACCATAAAGATAAGTAAGGAATCTTTACCTGGATAATTGAATTCAAGGATGAAGGTTAAGATGGAAGAAGTGTAGTAAATGATAAGTACCAAAACAAAGAAAGTGTATTTGACATATATTCTGTATGAGAAATCTTATCTTTGAAGCTAGCATTTACCCAATTACCCAGATTTTATTTTCCTTCTTTGAGGACACCAGCAATGAGGCTACTTTTTTCTACCCTATGGCACATTATTTTCATTTTCCTTCTTCAAGGTTTCACTTTTATAGGGTAGGTCATCCTATTAAAACATAACTTTGCAGGAAAATATCAGGCGGTGTGTCTGCATTATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTCAAGGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGTAACAACTTTACAGGAGAGAAGTACGTAATTCTTTTGCGTTATTCTTTTAAGTAAAGTTGCTTATTAAAATTTATTTGTATTGCTGCAACAGGTTGAGGGAGAAGAATTTCTCATGGGTTGATATTTTTGAGGAAATACCTGTAAGTCACTTGGGCCTGCATCTATTCACTTTTTTAACATTATTATATAAGTTGATCGAATGATTATGTTATGTTTTTTGTTTGTTGTTTTTTCTGTGGTTTAAATCTTGTTTCTATCTTATTTTTTCCTCAATCCGTTGTTGGACCCTGTTGCTGTCTTATTGATGATTGCTCAAAAGTCATTTTAGGTTGACAAACTTTCTGAGTAGACAATGTAACCAAATATCTATCCTATCTCGTGTCTTTATAGATAAAAGTTTCAAATTCAGCCCTCATTAGTGCTTTTATGACTGAGCTTGAAGCTGACTCTCCAGTCACCCAGGTAAAATATCATTTGTCGGTCCTTTTCTTAAAAGTAGGTGATCTAGATTGTATCTTCTGTTTTCGTCTTTATTGATAACATCATTGCTATTTCAGTGTGATTATGACCGCCTACAACTTTCAACTAATCCATTTATGGAGAGGAATGTGGAATTTCTTATTGAATGTATGGATGATTTGTCGGTGGAGCAGCAGAAGGTTCGTGCCCTTTATTGAAGTTTCTGTTTTTTTTTTTTTAATGATGGTTATGTGCACTATACAATTCAATCTTTCTCTAGTTTCTGTTGTATGATTGGTTGTGGCACAATATAATTCAATATTCTTTTCCAGTTTCAATTCTATTATCGGAGTCTGACCCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGTGAATCCATTTAGCTCATTTAAAACGTATATTCTTAATATTCGTGTGCATTTCTGTTGCATCAATGATCATGGTTGGGAATTGTTACTTGGGTTTTTACGAAAACGGTTGTAAGATACATTTGCACATCAACATAAATTGCATGTTCACGAAGTTATGGAATCTGTTCTGCAGGGCTGAGAACATGGCGAGGAAGGCAGCAGGAGAAGAACCTCTCCCTGAGGAGGATCCTGCGAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACCAATCAAATAGGAAACTACTGCAACCAAATCAATGGGTATGATGCTACCTACTACTACCAATCTTATTGTCCAAAAATGAATAATTTCATTCACTCCTCTTATCATTATCTTGGAGAACCTAATATTCTTGTTGAATGCCCCGAGAGTTGAATAGTGATTTTGTGTATTGAAAAATTTCAGGGTTGCGGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTTTGCATGACAATTAACTTTCGACGCTTTTGAAGATCTATTCTCTTTGCAGCGTCTATTATTTTTTTTAGTTTTGTTATGCATGTGAAATTGGGAAGAGTAAAACAAGAGATTTTATTTTGATATGAGTCCTAGAGTTGCTGTAATCTATTTTTAATTCAATCAAATATCATCGGTTCGATTTGCTCCATAAACGTGCTCTCAAGGATTAGGGACAGCTCTACGTGATTTTTATCATAATTTTTTTTTTTCGATGGATCGAAATCAGTTAAGTTAGTTTTGGTTGGTTAGCTCGCTTTTTCGGAGGAGAATAAAAAATAGGTTGGAATATAGACATTGTGAATTTCTTAGGATTTGTTCATCATCTGTGACAACTGGAAATTACAAAGTTAAGTTAATTCAGATCAATCCTCCAAAGGCGCAGAAGCAACTGCTCACATGGTCTTCTCCATACTCCACCGGCCTTCTTCCTGTCACGATCTCCAGAATCAGCACCCTGAACCTGTGTATGTGTACGTTCTCTGGTGAGCTAGTTCTGGGGCAAATGTGAGCTAGTTCTGGGGGAATGTACACCATTTGGAGGTATCTGTT

mRNA sequence

TATACATATTCGGCCCATTTAACCCAAACTGGGCCCACAGTGGGAGTTGTTTCTTCTCTTGCCCATCACCGGACTGTGCTGCCGCTGGTAGGGTTTATTCACAAACTCTCGTACTTTCGCACCTCTGAAAGACGCGCGAAGCCGCTTCTGCGATTCAATTCAGCTCTTTCTTCCATCATCCTCGAGCTTTGCGAATCGCTGATCATGGCAAACACAATGGCTAGATCTTTTCTGCAGGTCGCCGTCACGGAAGAGGTGGCTTCCCCACTCCGAGTTGTTCAGATTGAAGGCTTGGTTATACTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCCTCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTTACCAATTGCTTTCCCTTCCCGACACGAGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAACACTGTTGGATGGTACCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGTTGATTGAGACCTTTATGAATTATCAGGAAAATATCAGGCGGTGTGTCTGCATTATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTCAAGGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGTAACAACTTTACAGGAGAGAAGTTGAGGGAGAAGAATTTCTCATGGGTTGATATTTTTGAGGAAATACCTATAAAAGTTTCAAATTCAGCCCTCATTAGTGCTTTTATGACTGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTACAACTTTCAACTAATCCATTTATGGAGAGGAATGTGGAATTTCTTATTGAATGTATGGATGATTTGTCGGTGGAGCAGCAGAAGTTTCAATTCTATTATCGGAGTCTGACCCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCTGAGAACATGGCGAGGAAGGCAGCAGGAGAAGAACCTCTCCCTGAGGAGGATCCTGCGAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACCAATCAAATAGGAAACTACTGCAACCAAATCAATGGGGTTGCGGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTTTGCATGACAATTAACTTTCGACGCTTTTGAAGATCTATTCTCTTTGCAGCGTCTATTATTTTTTTTAGTTTTGTTATGCATGTGAAATTGGGAAGAGTAAAACAAGAGATTTTATTTTGATATGAGTCCTAGAGTTGCTGTAATCTATTTTTAATTCAATCAAATATCATCGGTTCGATTTGCTCCATAAACGTGCTCTCAAGGATTAGGGACAGCTCTACGTGATTTTTATCATAATTTTTTTTTTTCGATGGATCGAAATCAGTTAAGTTAGTTTTGGTTGGTTAGCTCGCTTTTTCGGAGGAGAATAAAAAATAGGTTGGAATATAGACATTGTGAATTTCTTAGGATTTGTTCATCATCTGTGACAACTGGAAATTACAAAGTTAAGTTAATTCAGATCAATCCTCCAAAGGCGCAGAAGCAACTGCTCACATGGTCTTCTCCATACTCCACCGGCCTTCTTCCTGTCACGATCTCCAGAATCAGCACCCTGAACCTGTGTATGTGTACGTTCTCTGGTGAGCTAGTTCTGGGGCAAATGTGAGCTAGTTCTGGGGGAATGTACACCATTTGGAGGTATCTGTT

Coding sequence (CDS)

ATGGCAAACACAATGGCTAGATCTTTTCTGCAGGTCGCCGTCACGGAAGAGGTGGCTTCCCCACTCCGAGTTGTTCAGATTGAAGGCTTGGTTATACTGAAGATAATCAAGCATTGCAAGGAGTTTTCACCCTCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTTACCAATTGCTTTCCCTTCCCGACACGAGAGGAGGATGAGGAGATTGAAGCCGATGGTGCTAATTACCAGCTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAACACTGTTGGATGGTACCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGTTGATTGAGACCTTTATGAATTATCAGGAAAATATCAGGCGGTGTGTCTGCATTATTTATGACCCATCAAGGTCTAATCAAGGCGTCTTAGCTCTCAAGGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGTAACAACTTTACAGGAGAGAAGTTGAGGGAGAAGAATTTCTCATGGGTTGATATTTTTGAGGAAATACCTATAAAAGTTTCAAATTCAGCCCTCATTAGTGCTTTTATGACTGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTACAACTTTCAACTAATCCATTTATGGAGAGGAATGTGGAATTTCTTATTGAATGTATGGATGATTTGTCGGTGGAGCAGCAGAAGTTTCAATTCTATTATCGGAGTCTGACCCGTCAGCAAGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCTGAGAACATGGCGAGGAAGGCAGCAGGAGAAGAACCTCTCCCTGAGGAGGATCCTGCGAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACCAATCAAATAGGAAACTACTGCAACCAAATCAATGGGGTTGCGGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTTTGCATGACAATTAA

Protein sequence

MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN

Homology

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BLAST of Cp4.1LG08g05960 vs. ExPASy Swiss-Prot
Match: Q9C5Z2 (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana OX=3702 GN=TIF3H1 PE=1 SV=2)

HSP 1 Score: 575.5 bits (1482), Expect = 4.0e-163
Identity = 282/335 (84.18%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 4   TMARSFLQ-VAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVLEV 63
           TMARSFLQ ++  E VA PLRVVQIEGL +LKIIKHCKEFSP+LVTGQLLGLDVGSVLEV
Sbjct: 3   TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEV 62

Query: 64  TNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETF 123
           TNCFPFP R++DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQST LGSYQTVELIETF
Sbjct: 63  TNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETF 122

Query: 124 MNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDI 183
           MNYQENI+RCVCIIYDPS+++ GVLALKALKLSDSFMELYR  NFTGEKLREKNFSW+DI
Sbjct: 123 MNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDI 182

Query: 184 FEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVE 243
           FEEIPIKVSNSAL+SAFMTELE D+PV+Q DYDRL  ST PF+E N+EFLI+CMDDLS+E
Sbjct: 183 FEEIPIKVSNSALVSAFMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSME 242

Query: 244 QQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLD 303
           QQKFQ+YYR+L+RQQAQQQAWLQKRR ENMARK+AGEEPLPEEDP+NPIFK +PEPSRL+
Sbjct: 243 QQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLE 302

Query: 304 SYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 338
           S+LITNQ+ N+C QINGVAGQ+F+RL+L KALHDN
Sbjct: 303 SFLITNQVSNFCGQINGVAGQNFSRLYLTKALHDN 337

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BLAST of Cp4.1LG08g05960 vs. ExPASy Swiss-Prot
Match: A7SA47 (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis OX=45351 GN=v1g168210 PE=3 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 7.0e-75
Identity = 142/315 (45.08%), Postives = 215/315 (68.25%), Query Frame = 0


Query: 24  VVQIEGLVILKIIKHCKE--FSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADG 83
           +VQ++GL +LKIIKHC+E   S  LV G LLGL   + LE+TNCFPFP+ +  ++ + D 
Sbjct: 17  IVQVDGLTVLKIIKHCEEEGSSGDLVQGVLLGLIQDNRLEITNCFPFPSNKAGDDEDDDD 76

Query: 84  ANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSR 143
            NYQ+E+MR LR VN+D+  VGWYQST+LGSY    L+++  +YQ++I   V +IYDP R
Sbjct: 77  VNYQMEVMRRLRAVNIDHLHVGWYQSTYLGSYINRTLLDSQYSYQKSIEESVVLIYDPLR 136

Query: 144 SNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDIFEEIPIKVSNSALISAFMT 203
           ++QG+L LKA +LSD  M+LY+   F+ +KL +   S+  +F+EIP+ + NS+L++  + 
Sbjct: 137 TSQGMLTLKAFRLSDEMMKLYKDGEFSADKLSKAGISFHSMFQEIPLVIKNSSLMNVLLC 196

Query: 204 ELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQ 263
           EL+ ++P    D   L LST  ++E+NV  L+E +D+L  +  K+  Y RS+ RQQ Q++
Sbjct: 197 ELDENTPTPSAD-QFLTLSTGSYLEKNVRVLMESVDELCQDSNKYHNYQRSVIRQQQQKE 256

Query: 264 AWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLDSYLITNQIGNYCNQINGVA 323
            +LQ+R+ EN +R   GE+PLP+ED  + +FKPLP PSRLD+ L++ Q+  YC  ++  +
Sbjct: 257 NYLQRRQQENQSRIQRGEDPLPDED-LSKMFKPLPVPSRLDNLLLSEQVNTYCQHVHQFS 316

Query: 324 GQSFNRLHLMKALHD 337
            QSF +  L +AL D
Sbjct: 317 TQSFGKFFLAQALQD 329

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BLAST of Cp4.1LG08g05960 vs. ExPASy Swiss-Prot
Match: Q54UD0 (Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum OX=44689 GN=eif3H PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.3e-73
Identity = 147/316 (46.52%), Postives = 210/316 (66.46%), Query Frame = 0


Query: 20  SPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEA 79
           S L VVQI+GLV+LKIIK CKE+ P LV GQLLGLD+G+ LEV+NCFPFP R++++E   
Sbjct: 14  SKLDVVQIDGLVVLKIIKQCKEYLPELVPGQLLGLDIGTSLEVSNCFPFPPRDQEDENSE 73

Query: 80  DGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENI-RRCVCIIYD 139
             A+YQLEMMR LREVN+D+NTVGWY  T+L S+    +IET  NYQ  I ++CV I+YD
Sbjct: 74  SIADYQLEMMRFLREVNIDSNTVGWYTPTYLNSFFNESVIETQYNYQATINQKCVVIVYD 133

Query: 140 PSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDIFEEIPIKVSNSALISA 199
           P +++QG L+LK  +L+ SFMEL++  +F+ E+L + N S+ DIFE+IPIK+ NS LI+A
Sbjct: 134 PIKTSQGTLSLKCYRLTQSFMELFKDQSFSRERLDQANLSFNDIFEQIPIKIHNSQLINA 193

Query: 200 FMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQA 259
            + E +  S      +DRL +S N ++E+ VE + +C++ L+ E  K     R++   Q 
Sbjct: 194 LLYEFDGASNNLTNSFDRLNISNNIYLEKVVEGMTDCLESLNQELNKVYINQRNI---QT 253

Query: 260 QQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLDSYLITNQIGNYCNQIN 319
           Q+  ++Q++  E             +ED    + KPL  PS+L S L+TNQI NY +QI+
Sbjct: 254 QKTNYIQQKFLEGQK---------VDEDELASMIKPLNPPSKLTSLLLTNQINNYTDQIH 313

Query: 320 GVAGQSFNRLHLMKAL 335
             +G S  +L L+K L
Sbjct: 314 SFSGNSLTKLSLLKDL 317

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BLAST of Cp4.1LG08g05960 vs. ExPASy Swiss-Prot
Match: Q5PPY6 (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis OX=8355 GN=eif3h PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 7.0e-67
Identity = 134/317 (42.27%), Postives = 209/317 (65.93%), Query Frame = 0


Query: 22  LRVVQIEGLVILKIIKHCKE--FSPSLVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEA 81
           ++ VQI+GLV+LKIIKH +E      +V G LLGL V   LE+TNCFPFP   ED +++ 
Sbjct: 18  VKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFPQHTED-DVDF 77

Query: 82  DGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDP 141
           D   YQ+EMMR LR VN+D+  VGWYQSTF G++ +  L+++  +YQ  I   V +IYDP
Sbjct: 78  DEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDP 137

Query: 142 SRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDIFEEIPIKVSNSALISAF 201
            +++QG L+LKA +L+   ME+ +  +F+ E L++ N ++ D+FEE+PI + NS LI+  
Sbjct: 138 IKTSQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKANVAYEDMFEEVPIVIKNSHLINVL 197

Query: 202 MTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQ 261
           + EL+  +PVT+  ++ L LS++  +E++++ L++ +D++S +  K+  Y R++ +QQ Q
Sbjct: 198 VWELDKKAPVTE-KHELLNLSSSNHLEKSLQLLMDRVDEMSQDIVKYNTYQRNVGKQQQQ 257

Query: 262 QQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLDSYLITNQIGNYCNQING 321
           +  + Q+++ EN+ R + GE PLPEED  N +FKP   PSR+D  LI  QI  Y   I G
Sbjct: 258 KHQYTQRKQQENLQRLSRGETPLPEED-VNKMFKPPVTPSRMDPLLIAGQINTYIQHIKG 317

Query: 322 VAGQSFNRLHLMKALHD 337
              Q+  +L + +AL D
Sbjct: 318 FTSQNLGKLFMAEALQD 331

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BLAST of Cp4.1LG08g05960 vs. ExPASy Swiss-Prot
Match: Q6P381 (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis OX=8364 GN=eif3h PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 7.8e-66
Identity = 138/335 (41.19%), Postives = 215/335 (64.18%), Query Frame = 0


Query: 5   MARSFLQVAVTEEVA-SPLRVVQIEGLVILKIIKHCKE--FSPSLVTGQLLGLDVGSVLE 64
           MA    +   T  VA + ++ VQI+G+V+LKIIKH +E      +V G LLGL V   LE
Sbjct: 1   MAARTRETGNTATVAETAVKQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLE 60

Query: 65  VTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIET 124
           +TNCFPFP   ED +++ D   YQ+EMMR LR VN+D+  VGWYQSTF G++ +  L+++
Sbjct: 61  ITNCFPFPQHTED-DVDFDEVQYQMEMMRSLRHVNIDHLHVGWYQSTFYGTFVSRALLDS 120

Query: 125 FMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVD 184
             +YQ  I   V +IYDP ++ QG L+LKA +L+   ME+ +  +F+ E L++ N ++ D
Sbjct: 121 QFSYQHAIEESVVLIYDPIKTGQGSLSLKAYRLTPKLMEVCKEKDFSAEGLKKANIAFED 180

Query: 185 IFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSV 244
           +FEE+PI + NS LI+    EL+  +PVT+  ++ L LS++  +E++++ L++ +D+LS 
Sbjct: 181 MFEEVPIIIKNSHLINVLAWELDKKAPVTE-KHELLNLSSSNHLEKSLQLLMDRVDELSQ 240

Query: 245 EQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRL 304
           +  K+  Y R++++QQ Q+  + Q+R+ EN+ R++ GE  LPEED  N +FKP   PSR+
Sbjct: 241 DIVKYNTYLRNISKQQQQKHQYTQRRQQENLQRQSRGETSLPEED-VNKLFKPPVPPSRM 300

Query: 305 DSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHD 337
           DS LI  QI  Y   I     Q+  +L + +A+ D
Sbjct: 301 DSLLIAGQINTYIQHIKEFTSQNLGKLFMAEAMQD 332

[Close]

BLAST of Cp4.1LG08g05960 vs. NCBI nr
Match: XP_022932637.1 (eukaryotic translation initiation factor 3 subunit H [Cucurbita moschata] >XP_022972109.1 eukaryotic translation initiation factor 3 subunit H [Cucurbita maxima] >XP_023539151.1 eukaryotic translation initiation factor 3 subunit H [Cucurbita pepo subsp. pepo] >KAG6597643.1 Eukaryotic translation initiation factor 3 subunit H, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 666 bits (1719), Expect = 2.32e-241
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. NCBI nr
Match: XP_038880772.1 (eukaryotic translation initiation factor 3 subunit H [Benincasa hispida])

HSP 1 Score: 652 bits (1683), Expect = 7.14e-236
Identity = 329/337 (97.63%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVA TEEVASPLRVVQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSN+FTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENM RKAAGEEPLPEEDP NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. NCBI nr
Match: XP_008453973.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit H [Cucumis melo] >TYK16981.1 eukaryotic translation initiation factor 3 subunit H [Cucumis melo var. makuwa])

HSP 1 Score: 650 bits (1677), Expect = 5.86e-235
Identity = 327/337 (97.03%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVA TEEVASPLRVVQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+FTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE+DSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENM RKAAGEEPLPEEDP NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQISNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. NCBI nr
Match: XP_022145220.1 (eukaryotic translation initiation factor 3 subunit H [Momordica charantia])

HSP 1 Score: 649 bits (1674), Expect = 1.68e-234
Identity = 327/337 (97.03%), Postives = 330/337 (97.92%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVA TEEVASPL+ VQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGS L
Sbjct: 1   MANTMARSFLQVAATEEVASPLKFVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSTL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
            IFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 GIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENM RKAAGEEPLPEEDP+NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPSNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. NCBI nr
Match: XP_004152102.1 (eukaryotic translation initiation factor 3 subunit H [Cucumis sativus] >KGN53080.1 hypothetical protein Csa_015119 [Cucumis sativus])

HSP 1 Score: 649 bits (1674), Expect = 1.68e-234
Identity = 326/337 (96.74%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVA TEEVASPLRVVQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+FTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE+DSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQ+WLQKRRAENM RKAAGEEPLPEEDP NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQSWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. ExPASy TrEMBL
Match: A0A6J1IAJ1 (Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita maxima OX=3661 GN=LOC111470742 PE=3 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 1.12e-241
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. ExPASy TrEMBL
Match: A0A6J1EXB6 (Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita moschata OX=3662 GN=LOC111439131 PE=3 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 1.12e-241
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL
Sbjct: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. ExPASy TrEMBL
Match: A0A5D3CYC1 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001220 PE=3 SV=1)

HSP 1 Score: 650 bits (1677), Expect = 2.84e-235
Identity = 327/337 (97.03%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVA TEEVASPLRVVQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+FTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE+DSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENM RKAAGEEPLPEEDP NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQISNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. ExPASy TrEMBL
Match: A0A1S3BYB7 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo OX=3656 GN=LOC103494533 PE=3 SV=1)

HSP 1 Score: 650 bits (1677), Expect = 2.84e-235
Identity = 327/337 (97.03%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVA TEEVASPLRVVQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+FTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE+DSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENM RKAAGEEPLPEEDP NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQISNYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. ExPASy TrEMBL
Match: A0A0A0KTY9 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis sativus OX=3659 GN=Csa_4G015700 PE=3 SV=1)

HSP 1 Score: 649 bits (1674), Expect = 8.14e-235
Identity = 326/337 (96.74%), Postives = 332/337 (98.52%), Query Frame = 0


Query: 1   MANTMARSFLQVAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVL 60
           MAN+MARSFLQVA TEEVASPLRVVQIEGLVILKIIKHCKEFSP+LVTGQLLGLDVGSVL
Sbjct: 1   MANSMARSFLQVAATEEVASPLRVVQIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVL 60

Query: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120
           EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE
Sbjct: 61  EVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIE 120

Query: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWV 180
           TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYR+N+FTGEKLREKN SWV
Sbjct: 121 TFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRTNSFTGEKLREKNLSWV 180

Query: 181 DIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240
           DIFEEIPIKVSNSALISAFMTELE+DSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS
Sbjct: 181 DIFEEIPIKVSNSALISAFMTELESDSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLS 240

Query: 241 VEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSR 300
           VEQQKFQFYYRSLTRQQAQQQ+WLQKRRAENM RKAAGEEPLPEEDP NPIFKPLPEPSR
Sbjct: 241 VEQQKFQFYYRSLTRQQAQQQSWLQKRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSR 300

Query: 301 LDSYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 337
           LDSYLITNQI NYCNQINGVAGQSFNRLHLMKALHDN
Sbjct: 301 LDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. TAIR 10
Match: AT1G10840.1 (translation initiation factor 3 subunit H1 )

HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-164
Identity = 282/335 (84.18%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 4   TMARSFLQ-VAVTEEVASPLRVVQIEGLVILKIIKHCKEFSPSLVTGQLLGLDVGSVLEV 63
           TMARSFLQ ++  E VA PLRVVQIEGL +LKIIKHCKEFSP+LVTGQLLGLDVGSVLEV
Sbjct: 3   TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEV 62

Query: 64  TNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETF 123
           TNCFPFP R++DEEIEADGANYQLEMMRCLREVNVDNNTVGWYQST LGSYQTVELIETF
Sbjct: 63  TNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETF 122

Query: 124 MNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDI 183
           MNYQENI+RCVCIIYDPS+++ GVLALKALKLSDSFMELYR  NFTGEKLREKNFSW+DI
Sbjct: 123 MNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDI 182

Query: 184 FEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVE 243
           FEEIPIKVSNSAL+SAFMTELE D+PV+Q DYDRL  ST PF+E N+EFLI+CMDDLS+E
Sbjct: 183 FEEIPIKVSNSALVSAFMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSME 242

Query: 244 QQKFQFYYRSLTRQQAQQQAWLQKRRAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLD 303
           QQKFQ+YYR+L+RQQAQQQAWLQKRR ENMARK+AGEEPLPEEDP+NPIFK +PEPSRL+
Sbjct: 243 QQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLE 302

Query: 304 SYLITNQIGNYCNQINGVAGQSFNRLHLMKALHDN 338
           S+LITNQ+ N+C QINGVAGQ+F+RL+L KALHDN
Sbjct: 303 SFLITNQVSNFCGQINGVAGQNFSRLYLTKALHDN 337

[Close]

BLAST of Cp4.1LG08g05960 vs. TAIR 10
Match: AT1G10840.2 (translation initiation factor 3 subunit H1 )

HSP 1 Score: 436.8 bits (1122), Expect = 1.6e-122
Identity = 210/250 (84.00%), Postives = 235/250 (94.00%), Query Frame = 0


Query: 88  MMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVL 147
           MMRCLREVNVDNNTVGWYQST LGSYQTVELIETFMNYQENI+RCVCIIYDPS+++ GVL
Sbjct: 1   MMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVL 60

Query: 148 ALKALKLSDSFMELYRSNNFTGEKLREKNFSWVDIFEEIPIKVSNSALISAFMTELEADS 207
           ALKALKLSDSFMELYR  NFTGEKLREKNFSW+DIFEEIPIKVSNSAL+SAFMTELE D+
Sbjct: 61  ALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSAFMTELETDT 120

Query: 208 PVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKR 267
           PV+Q DYDRL  ST PF+E N+EFLI+CMDDLS+EQQKFQ+YYR+L+RQQAQQQAWLQKR
Sbjct: 121 PVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKR 180

Query: 268 RAENMARKAAGEEPLPEEDPANPIFKPLPEPSRLDSYLITNQIGNYCNQINGVAGQSFNR 327
           R ENMARK+AGEEPLPEEDP+NPIFK +PEPSRL+S+LITNQ+ N+C QINGVAGQ+F+R
Sbjct: 181 RTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLESFLITNQVSNFCGQINGVAGQNFSR 240

Query: 328 LHLMKALHDN 338
           L+L KALHDN
Sbjct: 241 LYLTKALHDN 250

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g05960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5Z2	4.0e-163	84.18	Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana OX=...	[more]
A7SA47	7.0e-75	45.08	Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis O...	[more]
Q54UD0	2.3e-73	46.52	Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum...	[more]
Q5PPY6	7.0e-67	42.27	Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis OX=8355 G...	[more]
Q6P381	7.8e-66	41.19	Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis OX=83...	[more]

BLAST of Cp4.1LG08g05960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932637.1	2.32e-241	100.00	eukaryotic translation initiation factor 3 subunit H [Cucurbita moschata] >XP_02...	[more]
XP_038880772.1	7.14e-236	97.63	eukaryotic translation initiation factor 3 subunit H [Benincasa hispida]	[more]
XP_008453973.1	5.86e-235	97.03	PREDICTED: eukaryotic translation initiation factor 3 subunit H [Cucumis melo] >...	[more]
XP_022145220.1	1.68e-234	97.03	eukaryotic translation initiation factor 3 subunit H [Momordica charantia]	[more]
XP_004152102.1	1.68e-234	96.74	eukaryotic translation initiation factor 3 subunit H [Cucumis sativus] >KGN53080...	[more]

BLAST of Cp4.1LG08g05960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IAJ1	1.12e-241	100.00	Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EXB6	1.12e-241	100.00	Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita moschata OX=36...	[more]
A0A5D3CYC1	2.84e-235	97.03	Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo var. makuwa...	[more]
A0A1S3BYB7	2.84e-235	97.03	Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KTY9	8.14e-235	96.74	Eukaryotic translation initiation factor 3 subunit H OS=Cucumis sativus OX=3659 ...	[more]

BLAST of Cp4.1LG08g05960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10840.1	2.8e-164	84.18	translation initiation factor 3 subunit H1	[more]
AT1G10840.2	1.6e-122	84.00	translation initiation factor 3 subunit H1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 24..157 e-value: 3.2E-11 score: 53.3
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 23..126 e-value: 8.0E-14 score: 51.6
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 2..214 e-value: 1.4E-42 score: 147.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..294
None	No IPR available	PANTHER	PTHR10410:SF24	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H	coord: 3..337
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 3..337
IPR027524	Eukaryotic translation initiation factor 3 subunit H	HAMAP	MF_03007	eIF3h	coord: 20..337 score: 43.518929
IPR027524	Eukaryotic translation initiation factor 3 subunit H	CDD	cd08065	MPN_eIF3h	coord: 23..286 e-value: 3.62008E-153 score: 428.609
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 25..158 score: 26.010891

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g05960.1	Cp4.1LG08g05960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
cellular_component	GO:0042788	polysomal ribosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0070122	isopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003743	translation initiation factor activity