Cp4.1LG08g05950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g05950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	vesicle transport protein GOT1-like
Location	Cp4.1LG08: 565382 .. 567101 (+)
RNA-Seq Expression	Cp4.1LG08g05950
Synteny	Cp4.1LG08g05950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGGTTCTTCTCTCTTTCTCCTTTCATTACTCTAACTCTTCGTTATGCATTCGTATTCCTTTAATTCTGCTGTTTTCATTGCATAACAACAATAATCGCCTGCAATTTGCTGCTCTCTCTTATGCTCATACTGATTTAATTGATGTAAATCTCTGTCTCTTTGTTATGTTCCAGGTTTTTATTAGATTTGTTCTCGAAACCTTGTTATTTGTTGTTCTGGTTGATTGATTCATTGATGGAACTTCATCTGGATCTTGTATGACTTTTCTCAATTTTTGCTGCGCTAACCCTAGGATTTTTGTTGATTGAAGTTGCTTTGCTGATCTGATCGGCCTGTTTCTTCTTGATTTCGTTTTGAAATTATGCAGTGAAGGCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAGTAAGTTTACTATTTCTTGCCGATGGACTATCCTGTAAAGTGGATCGGTTTCTCCTTTCAAGTAATTAGCTATTGGTTTAGGCCACTTGACTATTACAGTATTATCGTTTTATTCTGTTTGTAGTTTGGTAATTAGAATGTTTGGAATGAGTGTTCTGTTGGTCATAGGTTTGAATATGGGGAATCCGGCGTTGGCAATGGCCATGCGATGGAGTTTTCGATCACTTAATCTAGTATTGTTGCTTCTCGTCTGTATTTGCTTTCTTGGAACCGAAAATGTGTTGAAATGGAATTTTTGGTCTTTAACTAAGTTTAGTGGCTAGACACCATTTATAGACATTTTTATCCTATTAAGTCATAGATTGCTTTCACACATATTCTCAATGCTACGTATTTAGTTGATTTTTGCGTGTCTACTTTGGCAATATTCACGCATATAGGAGTGAAGCTGTGTGGTCTTTTCTAATTGTTTTGTCTCTTATATGGAATTGTTAATTTGTAATGGCATTAACGAGGAAATTTTCAAATGAGCAGAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATGTAAGTGTAAAATTTATATTTTTCTCGACCCAAGTAAAAAGATTTATAATGCTTGTTTCATTTCAATGTAAACTCTTAACACTACCACTTTTCTGATTCGCTGAATCAGATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGTCAGTGCCAGAGATAGATACTCTTTTCCTCATACTCGTCCTTTATCGTGCATGCATTTTTTTTTTCATGACAATATGCTATTCATTAATTGTGCAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGGTTTGTTGGAACCATGTGGCTACAATTTCAATTTGTCTGTATATGTCTTTCTAATATTGGGCTGTGCTGAATGTTGATAAATTATACTGTGCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

mRNA sequence

GAATGCATCTAGCCAGTGGCACGTCCCTGAATTGCTCTTCTCTTCGTGTTGAGTTCAGCCATTTCTGTCTGCACTCTCAGTGAAGGCAGGGAGGTGAATTTCAATTGTCAGTAGATATGGTTTCCTTTGAAATGAATGATCGCAAGAAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

Coding sequence (CDS)

ATGGTTTCCTTTGAAATGAATGATCGCAAGAAGATTGGCCTAGGACTGACAGGATTTGGGATATTTTTCTCATTCCTGGGAATTGTATTCTTCTTTGACAAGGGATTACTTGCCATGGGAAATATCCTGTTCTTCTCAGGAGTAACTCTCACCATTGGACTCAAGTCAACCATGCAATTCTTTATGAAACGTCAAAATTTTAAGGGAACAATTTCTTTTGGTTTAGGGTTCTTCTTTGTTATCATAGGATGGCCAATCATTGGCATGATATTGGAAGCGTATGGTTTTGTTGTTCTTTTCAGTGGCTTCTGGCCAACATTGGCAGTCTTTCTTCAGAAAATTCCAGTTCTTGGATGGTTATTTCAGCAACCATATGTCAGATCGGTTGGTTCATACTTCTTTTAG

Protein sequence

MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPYVRSVGSYFF

Homology

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy Swiss-Prot
Match: Q6NMM1 (Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-53
Identity = 98/129 (75.97%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           M S EMND KKIGLGLTGFG+FF+FLG++F FDKGL+AMGNILF +GVTLTIG+   +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           F KRQNFKGTISFGLGF  V+ GWPI G++LE+YGF+VLFSGFWPTLAVFLQ+IP+LGWL
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 121 FQQPYVRSV 130
            QQPY+RS+
Sbjct: 121 LQQPYIRSL 129

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy Swiss-Prot
Match: Q9CR60 (Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30
Identity = 65/123 (52.85%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 6   MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 65
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF +R 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQRH 63

Query: 66  NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 125
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KVKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 126 VRS 129
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy Swiss-Prot
Match: Q2YDE3 (Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-30
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 6   MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 65
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 66  NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 125
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 126 VRS 129
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy Swiss-Prot
Match: Q9Y3E0 (Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.1e-30
Identity = 64/123 (52.03%), Postives = 88/123 (71.54%), Query Frame = 0


Query: 6   MNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMKRQ 65
           + D +KIG+GLTGFG+FF F G++ FFDK LLA+GN+LF +G+   IGL+ T +FF ++ 
Sbjct: 4   LTDTQKIGMGLTGFGVFFLFFGMILFFDKALLAIGNVLFVAGLAFVIGLERTFRFFFQKH 63

Query: 66  NFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQPY 125
             K T  F  G F V+IGWP+IGMI E YGF +LF GF+P +  F++++PVLG L   P 
Sbjct: 64  KMKATGFFLGGVFVVLIGWPLIGMIFEIYGFFLLFRGFFPVVVGFIRRVPVLGSLLNLPG 123

Query: 126 VRS 129
           +RS
Sbjct: 124 IRS 126

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy Swiss-Prot
Match: Q20263 (Probable Golgi transport protein 1 OS=Caenorhabditis elegans OX=6239 GN=eas-1 PE=3 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 7.7e-25
Identity = 58/129 (44.96%), Postives = 85/129 (65.89%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           M++FE++  K+IG+GLT FG FF FLG++ F D  LLA+GN+LF  G+T  IG++ T+ F
Sbjct: 1   MMNFEVSTTKQIGVGLTTFGFFFIFLGVLMFLDSALLAIGNLLFIVGITFIIGVQRTLVF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           F + +  KG+I F  G   V+ G+P+ GMI E +GF+VLF GF P +   L+ IP +  +
Sbjct: 61  FFEFRKLKGSILFFGGILVVLFGYPLFGMIAECWGFIVLFGGFLPGIVNLLRSIPGISTI 120

Query: 121 FQQPYVRSV 130
              P +R V
Sbjct: 121 TYLPGIRQV 129

[Close]

BLAST of Cp4.1LG08g05950 vs. NCBI nr
Match: KAG7029082.1 (Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (685), Expect = 5.82e-90
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 36  MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 95

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 96  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 155

Query: 121 FQQPYVRSVGSYFF 134
           FQQPYVRSVGSYFF
Sbjct: 156 FQQPYVRSVGSYFF 169

[Close]

BLAST of Cp4.1LG08g05950 vs. NCBI nr
Match: XP_022932598.1 (vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022972315.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_022972317.1 vesicle transport protein GOT1-like [Cucurbita maxima] >XP_023539038.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >XP_023539039.1 vesicle transport protein GOT1-like [Cucurbita pepo subsp. pepo] >KAG6597641.1 Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256 bits (653), Expect = 1.65e-85
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. NCBI nr
Match: XP_038879388.1 (vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879546.1 vesicle transport protein GOT1-like [Benincasa hispida])

HSP 1 Score: 254 bits (649), Expect = 6.72e-85
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. NCBI nr
Match: KAA0044616.1 (vesicle transport protein GOT1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 254 bits (648), Expect = 7.80e-85
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. NCBI nr
Match: XP_004152095.1 (vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transport protein GOT1 [Cucumis sativus] >KGN53100.1 hypothetical protein Csa_014796 [Cucumis sativus])

HSP 1 Score: 254 bits (648), Expect = 9.54e-85
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy TrEMBL
Match: A0A6J1I889 (vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 7.98e-86
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy TrEMBL
Match: A0A6J1F266 (vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC111439110 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 7.98e-86
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy TrEMBL
Match: A0A5A7TR70 (Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003670 PE=4 SV=1)

HSP 1 Score: 254 bits (648), Expect = 3.78e-85
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy TrEMBL
Match: A0A0A0KU00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1)

HSP 1 Score: 254 bits (648), Expect = 4.62e-85
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGTISFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTISFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. ExPASy TrEMBL
Match: A0A5D3CYI2 (Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001140 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 5.37e-85
Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           MVSFEMNDRKKIGLGLTGFG+FFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF
Sbjct: 1   MVSFEMNDRKKIGLGLTGFGVFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQNFKGT+SFGLGFFFVIIGWPI GMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL
Sbjct: 61  FMKRQNFKGTVSFGLGFFFVIIGWPIFGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120

Query: 121 FQQPYVRS 128
           FQQPYVRS
Sbjct: 121 FQQPYVRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. TAIR 10
Match: AT3G49420.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.7 bits (587), Expect = 6.8e-61
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPYVRS 129
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. TAIR 10
Match: AT5G01430.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.7 bits (587), Expect = 6.8e-61
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPYVRS 129
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. TAIR 10
Match: AT5G01430.2 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 230.7 bits (587), Expect = 6.8e-61
Identity = 112/128 (87.50%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           M+SFEMNDRKKIGLGLTGFG+FFSFLGIVF FDKGLLAMGNILF SGV+LTIG KSTMQF
Sbjct: 1   MMSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           FMKRQN+KGTISFG+GFFFVIIGWPI+GM+LE YGF VLFSGFWPTLAVF QKIPVLGW+
Sbjct: 61  FMKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWI 120

Query: 121 FQQPYVRS 129
            QQPY+RS
Sbjct: 121 IQQPYIRS 128

[Close]

BLAST of Cp4.1LG08g05950 vs. TAIR 10
Match: AT3G03180.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 210.3 bits (534), Expect = 9.5e-55
Identity = 98/129 (75.97%), Postives = 115/129 (89.15%), Query Frame = 0


Query: 1   MVSFEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQF 60
           M S EMND KKIGLGLTGFG+FF+FLG++F FDKGL+AMGNILF +GVTLTIG+   +QF
Sbjct: 1   MASLEMNDLKKIGLGLTGFGVFFTFLGVIFVFDKGLIAMGNILFLAGVTLTIGINPAIQF 60

Query: 61  FMKRQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWL 120
           F KRQNFKGTISFGLGF  V+ GWPI G++LE+YGF+VLFSGFWPTLAVFLQ+IP+LGWL
Sbjct: 61  FTKRQNFKGTISFGLGFLLVVFGWPIFGLLLESYGFLVLFSGFWPTLAVFLQRIPLLGWL 120

Query: 121 FQQPYVRSV 130
            QQPY+RS+
Sbjct: 121 LQQPYIRSL 129

[Close]

BLAST of Cp4.1LG08g05950 vs. TAIR 10
Match: AT1G05785.1 (Got1/Sft2-like vescicle transport protein family )

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-32
Identity = 62/121 (51.24%), Postives = 88/121 (72.73%), Query Frame = 0


Query: 4   FEMNDRKKIGLGLTGFGIFFSFLGIVFFFDKGLLAMGNILFFSGVTLTIGLKSTMQFFMK 63
           +E+ ++KK+GLGL GFG+ F+FLG++ +FD+GLLA+GN+ +  GV L +G +ST + F  
Sbjct: 3   YEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVFTN 62

Query: 64  RQNFKGTISFGLGFFFVIIGWPIIGMILEAYGFVVLFSGFWPTLAVFLQKIPVLGWLFQQ 123
             N +GTI F LG F + + WPIIG+ILE YG +VLF GFW T+  FL +IP +GW+ Q 
Sbjct: 63  VNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWIIQY 122

Query: 124 P 125
           P
Sbjct: 123 P 123

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g05950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMM1	1.3e-53	75.97	Vesicle transport protein GOT1 OS=Arabidopsis thaliana OX=3702 GN=GOT1 PE=1 SV=1	[more]
Q9CR60	1.2e-30	52.85	Vesicle transport protein GOT1B OS=Mus musculus OX=10090 GN=Golt1b PE=1 SV=1	[more]
Q2YDE3	2.1e-30	52.03	Vesicle transport protein GOT1B OS=Bos taurus OX=9913 GN=GOLT1B PE=2 SV=1	[more]
Q9Y3E0	2.1e-30	52.03	Vesicle transport protein GOT1B OS=Homo sapiens OX=9606 GN=GOLT1B PE=1 SV=1	[more]
Q20263	7.7e-25	44.96	Probable Golgi transport protein 1 OS=Caenorhabditis elegans OX=6239 GN=eas-1 PE...	[more]

BLAST of Cp4.1LG08g05950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029082.1	5.82e-90	100.00	Vesicle transport protein GOT1, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022932598.1	1.65e-85	100.00	vesicle transport protein GOT1-like [Cucurbita moschata] >XP_022932599.1 vesicle...	[more]
XP_038879388.1	6.72e-85	99.22	vesicle transport protein GOT1-like [Benincasa hispida] >XP_038879468.1 vesicle ...	[more]
KAA0044616.1	7.80e-85	98.44	vesicle transport protein GOT1B-like [Cucumis melo var. makuwa]	[more]
XP_004152095.1	9.54e-85	98.44	vesicle transport protein GOT1 [Cucumis sativus] >XP_031740250.1 vesicle transpo...	[more]

BLAST of Cp4.1LG08g05950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I889	7.98e-86	100.00	vesicle transport protein GOT1-like OS=Cucurbita maxima OX=3661 GN=LOC111470890 ...	[more]
A0A6J1F266	7.98e-86	100.00	vesicle transport protein GOT1-like OS=Cucurbita moschata OX=3662 GN=LOC11143911...	[more]
A0A5A7TR70	3.78e-85	98.44	Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KU00	4.62e-85	98.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016390 PE=4 SV=1	[more]
A0A5D3CYI2	5.37e-85	97.66	Vesicle transport protein GOT1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cp4.1LG08g05950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49420.1	6.8e-61	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.1	6.8e-61	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT5G01430.2	6.8e-61	87.50	Got1/Sft2-like vescicle transport protein family	[more]
AT3G03180.1	9.5e-55	75.97	Got1/Sft2-like vescicle transport protein family	[more]
AT1G05785.1	1.0e-32	51.24	Got1/Sft2-like vescicle transport protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 21..115 e-value: 6.1E-15 score: 55.6
None	No IPR available	PANTHER	PTHR21493	CGI-141-RELATED/LIPASE CONTAINING PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR21493:SF248	SUBFAMILY NOT NAMED	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g05950.1	Cp4.1LG08g05950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane