Cp4.1LG08g05600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG08g05600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionsplicing factor 3B subunit 4-like
LocationCp4.1LG08: 728182 .. 732735 (-)
RNA-Seq ExpressionCp4.1LG08g05600
SyntenyCp4.1LG08g05600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATTAAGAAAACAAAACCCCGTAGGAACTCCTTCGACTCTCCCCAGTCTGCAAGAGGTTTTAGATTGTAGTTTCTGATCCCCAAACGCGGCAACTGGTTCACCGACTTGCCGGAGAAGATGACGACGAAGATAGCGCCGGGGGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTCCTTTGTTCTCTTCCTCCCTGCTTTTTTCAACTAATCCATCTTCAAATCCCCTCCTCTAGGGTTTCTATGTTCATTTAATTTTGTTTTTGTTATACTATTTTTCTGTTTTTTGTGTTTCTTGTAGGTTTCTGAGGAGTTGCTTTGGGAGCTGTTTGTTCAAGCCGGCCCAGTTGGTGCGTTCTTTCGTTTCTCTCGTTTTGTGAAGTCTTTGGAATTTATGGAGACTCTGTTTGAGCTGTCTTTTTTCCTTCTTGGTTTGAGCATTTCCTTGAAAAAATTTGTGTCCACTTGTTATTTTGCAGTTAATGTGTACGTTCCGAAGGATAGAGTTACTAACTTGCATCAAGGATATGGATTCATTGAGTTTCGCAGTGAGGAAGATGCAGATTATGTAAGTAACGCTGGGACTCTTGCGCTTTTTTATCCTCCTAGTTATGTGTTTATTTTGATTTTCCATTCTTAATGCTTTTGCAGGCAATTAAGGTTTTGAATATGATTAAGCTCTACGGGAAGCCAATTCGTGTAAACAAGGTGTGTAGGGGATTTATTCTTTCAACTGTGCTAGGATGCGTTTTGATTTTCTGCTTAGCAAAGGAAGATGGTATTTTATATTCTTATGAAAATTGATATCTTACTTTTGTTATGTGTGCATTGCATATTTCCAGGCGTCTCAAGACAAGAAGAGTTTGGATGTGGGAGCGAATCTCTTCATAGGAAACCTAGACCCTGTGAGTAGTTATTTTATCATGATTATAACGGGAAGACTTGCAAGCTAATGATTTAACGAAGGTAACTAAACCTTGACGTTTGTGTCAGGATGTCGATGAAAAGCTCCTCTACGATACTTTCAGTGCTTTTGGGGTCATTGTGACAAATCCTAAGGTTATAACTTTTCCTATAAACCTCATCACTCATTTATGTTTTGTTTATCTTAGGAGATTAGGGCTCATTTTCAAGCAAACTAGTTACTTTCTAAGGAAGTAATCTTATTACAACTTAATGAAGTGAAGTCCCTTCATGAAAATATTAACCATGACATTGCCTTTTAGTACATTTCACATGTATACGATATCTTTGGCTGTGTATCTTTTCTGGAGCGTGTTGAACATAGTTCGTCTCTAGCCTTTATTTTCTTTTATGGGGCTGCTAAACCTTGGAAGTTTGTGGTTATTTTTGGCTTTTATTTATTGTTAAATCATAAATAGGAAAATTTGGTCCCTATGGTTTGGAAAAAATTATAATTTAAACTCTATGGTCTTAAAAGTTAGAAAATAGTCGTTATGGTATGATAAGACCTCATAAATAACCTCTATGGTTTGATAAAATTCTCATAAATAAGGTCTATTTCTAACACTTAAGACCATGGGGACTAAATTCTAACTTGCTTTAAACCATAGAGACTAAATTTGTAATTTAACCTTTATTAATTTCTTTCTTTGTGATTTTGTAATGATTATGAAGTGAATCCTGAAAATTCATTCCTACCAAATATTGGCTGTTTAGCCAAAAGATTGCTCTGGATTATAAAACTGGTCTTGAATTTCTGATGTCCAATAAAAGATCTAGGGAGTTCAAGATAAGGGGAAGGGAAGACAAGATCTTAGAAATCTTTTAGCCAAGTAGACAATGCATTTATACATGTCTAAAAGTTAAATTTGTAGAATTTATTTCATGGCCACTCCGCATAAGATTCTGTAGTTGCTTTTGTGAACTGTAGCATTGTATTTAGTAAATCCATTTCTTGCCCCCCCCCCCCNAAAAAAAAGAATGAAGAATTACAGTATTTGTTCACTTTCTGGCATCTTACTTGAAGGGTGTTTTAGTAGAATACTGTTATGACGTTATTATTATATGGATCACTGTAATTTTCCAATTTCTCGTTCTTTTGTTTTATCTTTCTTTCTCATGTATAATGCCTCTTTGGTTGAAGTAAATTGACATGTCTCTCCTATTTCAAGCATAATGGTGATTGTTAGCAGCCAGTTTATGGTTTGGTTTCTTTTCTCTTTAACAAGTGTCTTTCCTAATAAAACATCATTTTAAATGTTTTCTCTTCCATTATTATTTTATTTTCGTGTATTACTTGGATTTACTGTATATTTTCTAGGATTTTGTAACTGGTTTTTCTTCCATGTGGGCTAGTACATTTTACTAGTACTTACCAGTATGATAATGTTTGTGAAAATGGGACTAGTTTTATGTCCTGGCTTTCTATATAATATTATTCTCTTGAAGTTCTTGTAGTTAGGTACGCCAGATTGGAAATTTGTTTGGCCTTTTAGGGGGTTAATAACATCATGGCTGTTGGGAGGCGTCTATATTTTTCTTACTGAACGTCTATCAGATCAGTTTCCTTCCATGCTTCAAGAGCAACGCAGAACTAGAGTTTTGTGTGCATAAGACACCACGCTGTTCCTTTATTTTTTAACTAAAGATCACTTCTTTTTGTATGCTCTATTTTTCATCTTTAGTTCTCTGTATCTTCTGTGTACTCAGGCTCTTTTTGGGGATGTATCAGAACGGTTTAATATGAAAGTTCTGAGTTTTATGCACTTTGTGTTCTAACACTTCAAATATCTTCGTGTTTCTAACCAGATTATGAGAGATCCAGATACGGGAAATTCACGTGGGTTTGGTTTTATTAGCTACGACTCTTTTGAAGCATCTGATGCAGCAATTGAGGTGTGTCTTTTCTTTTCTTATTGGTCGATCTCTGCACGCATGTCATTCTGTTTTGATACTATATGATGCTCATAATAAGCTTCCCTTAAATCATTGGAGCCTTCAGTGCCCCTAAATGTTAATGAAGTGAAAGAAGTGTTTTATTGCTACCATCTGATGTTAGCTTGAGTAGTATGGAGTTGAATTTGCAACCTTTGAATAGCTACTTAAAAGATGATGTTTTTGAAGATTCTTATTAGAAAGATTTTGCTTCTTTATTTCAAGGTGATTAAAGATAATCCTCCACCTCTCTTATTGAAGTTTGTGGTTTCAAGATGTGCTAAAGTTCTCTATTGGTTAAACATGGAAACAGTGAAAAACATTGCCCCTCTAAGCTCTTAGGTCCTGTTTTCGTGGTTTTCTTTCCACTTTCCATGAATTTTGTTTTGTTTGCTATTCTTGTGGAAATCTCAGCTTCTTTATCAGTTGATTTCCTTCGTGGCTTCGGTTCAAGCTTTTATCTCCAGATGGTTTTGACTTTTGTTCTCTTGTTCTGTGGTTGCTGTCGTTAACAGGCAATGAATGGCCAGTATCTTTGTAATCGTCAAATAACGGTTTCTTATGCCTATAAGAAAGATACCAAGGGTGAACGACACGGCACACCTGCGGGTAAGAATTATTTGCTGATCCGTGAACTTTATGGAATTGTTTTAGGTTATGAACAGATTTGAACCTAGTGATCTGTGGAAGGATATCATCGTCGTTGTCGTTGCTTATTTATCTCTGGTGTGGCTTTGTCTATTTTGTAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGACCTCACACTTTGTTTGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAGCCTAACGGCACGATGGGAACTCTGATGCCACCACGCCCCTTCGCTAATGGTGGCATTGCTCCCAGCCCAATTCCTGCTATACGTCCTCCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACAACCACCAGCCTGGCAGGGTCAGCCGCAGCAACAAGGTCAAATTATGCCGGGTTCCATGATGCTGCCCCCTGTTCAGCAATTTCGGCCACCTCCCCCAAACATGCCTCCGCCACCACCTCAGGCTCCTGGTCATTCCATGCCTATCCCTCCACCAATGGGAATGGGAGGAGGACAGCCACCTCTTTGGCGACCACCACCACTGCCAATGCAGCAGCAGCAGCAGCAGGGAAGGCCCCCTATGCAAATGTCGTCGATGCCCCCACCGCCACCTCCGAATCACATTCCACCACCTCATCCATCTTCTGGCTAAGACATTATTATACTAAGCTAGCAATGAGAATGAAGTTTTTTCTGCCTGAACATCATGTTTAGTTCTTTTTTATGATAATGTCCAGTAGGTTGTTATATTATCATTCAAATTGTAACACTTTCATCCGAGAAATTAGCAGGAAGCAATATGACATTTTTGCTACAAAATAGAGAATGTTCTCATCTTAGTTTGGGATACTTGTCAAGCTTCTAATGCACATTAGTAGAGTATCAATGGATATAGGCAAAGACCAGGTAGGTGACCATCGAGACTCGAGTTCGTTCTCTCTTTCAAAAACTCAATCTATTAGGAAATGTTTGGTTT

mRNA sequence

CAATTAAGAAAACAAAACCCCGTAGGAACTCCTTCGACTCTCCCCAGTCTGCAAGAGGTTTTAGATTGTAGTTTCTGATCCCCAAACGCGGCAACTGGTTCACCGACTTGCCGGAGAAGATGACGACGAAGATAGCGCCGGGGGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTTTCTGAGGAGTTGCTTTGGGAGCTGTTTGTTCAAGCCGGCCCAGTTGTTAATGTGTACGTTCCGAAGGATAGAGTTACTAACTTGCATCAAGGATATGGATTCATTGAGTTTCGCAGTGAGGAAGATGCAGATTATGCAATTAAGGTTTTGAATATGATTAAGCTCTACGGGAAGCCAATTCGTGTAAACAAGGCGTCTCAAGACAAGAAGAGTTTGGATGTGGGAGCGAATCTCTTCATAGGAAACCTAGACCCTGATGTCGATGAAAAGCTCCTCTACGATACTTTCAGTGCTTTTGGGGTCATTGTGACAAATCCTAAGATTATGAGAGATCCAGATACGGGAAATTCACGTGGGTTTGGTTTTATTAGCTACGACTCTTTTGAAGCATCTGATGCAGCAATTGAGGCAATGAATGGCCAGTATCTTTGTAATCGTCAAATAACGGTTTCTTATGCCTATAAGAAAGATACCAAGGGTGAACGACACGGCACACCTGCGGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGACCTCACACTTTGTTTGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAGCCTAACGGCACGATGGGAACTCTGATGCCACCACGCCCCTTCGCTAATGGTGGCATTGCTCCCAGCCCAATTCCTGCTATACGTCCTCCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACAACCACCAGCCTGGCAGGGTCAGCCGCAGCAACAAGGTCAAATTATGCCGGGTTCCATGATGCTGCCCCCTGTTCAGCAATTTCGGCCACCTCCCCCAAACATGCCTCCGCCACCACCTCAGGCTCCTGGTCATTCCATGCCTATCCCTCCACCAATGGGAATGGGAGGAGGACAGCCACCTCTTTGGCGACCACCACCACTGCCAATGCAGCAGCAGCAGCAGCAGGGAAGGCCCCCTATGCAAATGTCGTCGATGCCCCCACCGCCACCTCCGAATCACATTCCACCACCTCATCCATCTTCTGGCTAAGACATTATTATACTAAGCTAGCAATGAGAATGAAGTTTTTTCTGCCTGAACATCATGTTTAGTTCTTTTTTATGATAATGTCCAGTAGGTTGTTATATTATCATTCAAATTGTAACACTTTCATCCGAGAAATTAGCAGGAAGCAATATGACATTTTTGCTACAAAATAGAGAATGTTCTCATCTTAGTTTGGGATACTTGTCAAGCTTCTAATGCACATTAGTAGAGTATCAATGGATATAGGCAAAGACCAGGTAGGTGACCATCGAGACTCGAGTTCGTTCTCTCTTTCAAAAACTCAATCTATTAGGAAATGTTTGGTTT

Coding sequence (CDS)

ATGACGACGAAGATAGCGCCGGGGGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTTTCTGAGGAGTTGCTTTGGGAGCTGTTTGTTCAAGCCGGCCCAGTTGTTAATGTGTACGTTCCGAAGGATAGAGTTACTAACTTGCATCAAGGATATGGATTCATTGAGTTTCGCAGTGAGGAAGATGCAGATTATGCAATTAAGGTTTTGAATATGATTAAGCTCTACGGGAAGCCAATTCGTGTAAACAAGGCGTCTCAAGACAAGAAGAGTTTGGATGTGGGAGCGAATCTCTTCATAGGAAACCTAGACCCTGATGTCGATGAAAAGCTCCTCTACGATACTTTCAGTGCTTTTGGGGTCATTGTGACAAATCCTAAGATTATGAGAGATCCAGATACGGGAAATTCACGTGGGTTTGGTTTTATTAGCTACGACTCTTTTGAAGCATCTGATGCAGCAATTGAGGCAATGAATGGCCAGTATCTTTGTAATCGTCAAATAACGGTTTCTTATGCCTATAAGAAAGATACCAAGGGTGAACGACACGGCACACCTGCGGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGACCTCACACTTTGTTTGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAGCCTAACGGCACGATGGGAACTCTGATGCCACCACGCCCCTTCGCTAATGGTGGCATTGCTCCCAGCCCAATTCCTGCTATACGTCCTCCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACAACCACCAGCCTGGCAGGGTCAGCCGCAGCAACAAGGTCAAATTATGCCGGGTTCCATGATGCTGCCCCCTGTTCAGCAATTTCGGCCACCTCCCCCAAACATGCCTCCGCCACCACCTCAGGCTCCTGGTCATTCCATGCCTATCCCTCCACCAATGGGAATGGGAGGAGGACAGCCACCTCTTTGGCGACCACCACCACTGCCAATGCAGCAGCAGCAGCAGCAGGGAAGGCCCCCTATGCAAATGTCGTCGATGCCCCCACCGCCACCTCCGAATCACATTCCACCACCTCATCCATCTTCTGGCTAA

Protein sequence

MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGTLMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLPPVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQMSSMPPPPPPNHIPPPHPSSG
Homology
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BLAST of Cp4.1LG08g05600 vs. ExPASy Swiss-Prot
Match: Q15427 (Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B4 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-93
Identity = 221/402 (54.98%), Postives = 255/402 (63.43%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDA
Sbjct: 8   ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQP-NGTMGTLMPPRPFANGGIAPSP 259
           G+ AER+LAA NP  Q  RPH LFA  PP  P    P   ++G+ +PP      G  P P
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPP-PSAPNPVVSSLGSGLPPPGMPPPGSFPPP 247

Query: 260 IPAIRPPPPQGV--AFPPMQMP----GQPPAWQGQP---------QQQGQIMPGSMMLPP 319
           +P     PP G+  A PP  MP    G  P   G P                PG M  P 
Sbjct: 248 VPPPGALPP-GIPPAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPG 307

Query: 320 VQQFR---------------PPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRP--PP 379
           + Q +               PP     PPP   PG   P PPPMGM    PP   P   P
Sbjct: 308 MSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHP 367

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy Swiss-Prot
Match: Q8QZY9 (Splicing factor 3B subunit 4 OS=Mus musculus OX=10090 GN=Sf3b4 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-93
Identity = 221/402 (54.98%), Postives = 255/402 (63.43%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDA
Sbjct: 8   ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQP-NGTMGTLMPPRPFANGGIAPSP 259
           G+ AER+LAA NP  Q  RPH LFA  PP  P    P   ++G+ +PP      G  P P
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPP-PSAPNPVVSSLGSGLPPPGMPPPGSFPPP 247

Query: 260 IPAIRPPPPQGV--AFPPMQMP----GQPPAWQGQP---------QQQGQIMPGSMMLPP 319
           +P     PP G+  A PP  MP    G  P   G P                PG M  P 
Sbjct: 248 VPPPGALPP-GIPPAMPPPPMPPGAGGHGPPAAGTPGAGHPGHGHSHPHPFPPGGMPHPG 307

Query: 320 VQQFR---------------PPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRP--PP 379
           + Q +               PP     PPP   PG   P PPPMGM    PP   P   P
Sbjct: 308 MSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHP 367

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy Swiss-Prot
Match: Q6AYL5 (Splicing factor 3B subunit 4 OS=Rattus norvegicus OX=10116 GN=Sf3b4 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.3e-93
Identity = 221/402 (54.98%), Postives = 255/402 (63.43%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDA
Sbjct: 8   ERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNLDP++DEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERH
Sbjct: 128 QTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQP-NGTMGTLMPPRPFANGGIAPSP 259
           G+ AER+LAA NP  Q  RPH LFA  PP  P    P   ++G+ +PP      G  P P
Sbjct: 188 GSAAERLLAAQNPLSQADRPHQLFADAPPP-PSAPNPVVSSLGSGLPPPGMPPPGSFPPP 247

Query: 260 IPAIRPPPPQGV--AFPPMQMP----GQPPAWQGQP---------QQQGQIMPGSMMLPP 319
           +P     PP G+  A PP  MP    G  P   G P                PG M  P 
Sbjct: 248 VPPPGALPP-GIPPAMPPPPMPPGAGGHGPPAAGTPGAGHPGHGHSHPHPFPPGGMPHPG 307

Query: 320 VQQFR---------------PPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRP--PP 379
           + Q +               PP     PPP   PG   P PPPMGM    PP   P   P
Sbjct: 308 MSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHP 367

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy Swiss-Prot
Match: Q09442 (Splicing factor 3B subunit 4 OS=Caenorhabditis elegans OX=6239 GN=sap-49 PE=1 SV=2)

HSP 1 Score: 326.6 bits (836), Expect = 3.6e-88
Identity = 211/390 (54.10%), Postives = 240/390 (61.54%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           ERNQDAT YVG LD +VSE +LWEL VQAGPVV+V +PKDRVT  HQG+GF+EF  EEDA
Sbjct: 8   ERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDA 67

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIV 139
           DYAIK+LNMIKLYGKPI+VNKAS  +K++DVGAN+F+GNLDP+VDEKLLYDTFSAFGVI+
Sbjct: 68  DYAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127

Query: 140 TNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERH 199
             PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERH
Sbjct: 128 QVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSKGERH 187

Query: 200 GTPAERVLAASNP--QKSRPHTLFASGPPTLPK-------------VAQPNGTMGTLMPP 259
           GT AER+LAA NP   K RPH +F+  P  +P               A   G  G   PP
Sbjct: 188 GTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPANTPLAMPGVHAAIAAHATGRPGYQPPP 247

Query: 260 RPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLPPVQQ 319
                        P + PPPP     PP  MP  P      P       P S M PP   
Sbjct: 248 LMGMAQSGYQGQYPPVPPPPPSVTPMPP-PMPPTPGMTPRPPPP-----PSSGMWPPPP- 307

Query: 320 FRPPPPNMPPPPPQAPGHSMPIPP----PMGMGGGQPPL---------WRPPPLPMQQQQ 379
             PPPP   P PP  PG   P PP    P GMGG  PP            PPP P     
Sbjct: 308 --PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSA 367

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy Swiss-Prot
Match: O14102 (Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sap49 PE=3 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 4.1e-63
Identity = 151/326 (46.32%), Postives = 199/326 (61.04%), Query Frame = 0 

Query: 20  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDA 79
           +RNQDAT Y+GNLD +V++ +L+EL +QAGPVVN+++P+DRV N H G+GF EF  E+D 
Sbjct: 6   DRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDV 65

Query: 80  DYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI 139
           +YA ++LN +KL+GKPIRVN+ASQD+  +  +GANLF+GNLDP VDE++LYDTFSA G +
Sbjct: 66  EYACQILNQVKLFGKPIRVNRASQDRGVNTLIGANLFVGNLDPLVDERVLYDTFSALGQL 125

Query: 140 VTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 199
           V  P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+K++ KGER
Sbjct: 126 VKAPQVARD-ENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGER 185

Query: 200 HGTPAERVLAAS--------NPQKSRPHTLFASGPPTLPKVAQPNGTMGTLMPPRP---- 259
           HG  AER LAA+         PQ + P     + P        P     T +PP P    
Sbjct: 186 HGDIAERKLAAAAKKNKVAVTPQSTLPPGFSPATPAPTSAANTPATIAATSIPPVPNVPL 245

Query: 260 -FANGGIAPSPIPAIRPPPPQGVAFPPMQ-MPGQPPAWQGQPQQQGQIMPGSMMLPPVQQ 319
             A   + P  IP + P       F   Q  PG P      P     + PG   L P   
Sbjct: 246 VGATTAVPPLSIPNVLP-------FTAAQHFPGMP----AMPMMNVPMGPGGAPLVP--- 305

Query: 320 FRPPPPNMPPPPPQAPGHSMPIPPPM 331
             PPPP M    P     ++P  P M
Sbjct: 306 --PPPPGMVMASPSPAAATIPGAPVM 314

[Close]
BLAST of Cp4.1LG08g05600 vs. NCBI nr
Match: XP_023540813.1 (splicing factor 3B subunit 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 752 bits (1942), Expect = 6.77e-274
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
           LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP
Sbjct: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPPPNHIPPPHPSSG
Sbjct: 361 SSMPPPPPPNHIPPPHPSSG 380

[Close]
BLAST of Cp4.1LG08g05600 vs. NCBI nr
Match: XP_022948089.1 (splicing factor 3B subunit 4-like [Cucurbita moschata] >KAG6597617.1 Splicing factor 3B subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029058.1 Splicing factor 3B subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 747 bits (1929), Expect = 6.49e-272
Identity = 378/380 (99.47%), Postives = 378/380 (99.47%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
           LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP
Sbjct: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPP PMQQQQQ GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPPPMQQQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPPPNHIPPPHPSSG
Sbjct: 361 SSMPPPPPPNHIPPPHPSSG 380

[Close]
BLAST of Cp4.1LG08g05600 vs. NCBI nr
Match: XP_022972146.1 (splicing factor 3B subunit 4-like [Cucurbita maxima])

HSP 1 Score: 739 bits (1909), Expect = 7.83e-269
Identity = 377/382 (98.69%), Postives = 377/382 (98.69%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
           LMPPRPFANGGI PSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP
Sbjct: 241 LMPPRPFANGGITPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQ--GRPPM 360
           PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPP PMQQQQQQ  GRP M
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPPPMQQQQQQQPGRPHM 360

Query: 361 QMSSMPPPPPPNHIPPPHPSSG 380
           QMSSMPPPPPPNHIPPPHPSSG
Sbjct: 361 QMSSMPPPPPPNHIPPPHPSSG 382

[Close]
BLAST of Cp4.1LG08g05600 vs. NCBI nr
Match: XP_022138265.1 (splicing factor 3B subunit 4 [Momordica charantia])

HSP 1 Score: 697 bits (1799), Expect = 3.91e-252
Identity = 360/380 (94.74%), Postives = 364/380 (95.79%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G 
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGVIGA 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
            +PPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPGQP AWQGQPQQ GQ+MPGSM+ P
Sbjct: 241 PVPPRPFANGTIAPSPIPAIRPPPPQGVAFPPMQMPGQP-AWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAP HSM IPPPMGMGG QPPLWRPPP PMQ QQQ GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPAHSMQIPPPMGMGGAQPPLWRPPPPPMQMQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPP NHIPPP  SSG
Sbjct: 361 SSMPPPPP-NHIPPPLQSSG 378

[Close]
BLAST of Cp4.1LG08g05600 vs. NCBI nr
Match: XP_038878136.1 (splicing factor 3B subunit 4 [Benincasa hispida])

HSP 1 Score: 695 bits (1794), Expect = 2.26e-251
Identity = 357/380 (93.95%), Postives = 362/380 (95.26%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G 
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
            +PPRPFANG I PSPIPAIRPPPPQGVAFPPM M GQPPAWQGQPQQ GQ+MPGS++ P
Sbjct: 241 PVPPRPFANGAITPSPIPAIRPPPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSIIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGG QPPLWRPPP PMQQQ   GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPLPPPQAQAHSMPIPPPMGMGGAQPPLWRPPPPPMQQQP--GRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPPPNHIPPP PSSG
Sbjct: 361 SSMPPPPPPNHIPPPLPSSG 378

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy TrEMBL
Match: A0A6J1G8U2 (splicing factor 3B subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451774 PE=3 SV=1)

HSP 1 Score: 747 bits (1929), Expect = 3.14e-272
Identity = 378/380 (99.47%), Postives = 378/380 (99.47%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
           LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP
Sbjct: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPP PMQQQQQ GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPPPMQQQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPPPNHIPPPHPSSG
Sbjct: 361 SSMPPPPPPNHIPPPHPSSG 380

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy TrEMBL
Match: A0A6J1I560 (splicing factor 3B subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470774 PE=3 SV=1)

HSP 1 Score: 739 bits (1909), Expect = 3.79e-269
Identity = 377/382 (98.69%), Postives = 377/382 (98.69%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
           LMPPRPFANGGI PSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP
Sbjct: 241 LMPPRPFANGGITPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQ--GRPPM 360
           PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPP PMQQQQQQ  GRP M
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPPPMQQQQQQQPGRPHM 360

Query: 361 QMSSMPPPPPPNHIPPPHPSSG 380
           QMSSMPPPPPPNHIPPPHPSSG
Sbjct: 361 QMSSMPPPPPPNHIPPPHPSSG 382

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy TrEMBL
Match: A0A6J1C8Z7 (splicing factor 3B subunit 4 OS=Momordica charantia OX=3673 GN=LOC111009481 PE=3 SV=1)

HSP 1 Score: 697 bits (1799), Expect = 1.89e-252
Identity = 360/380 (94.74%), Postives = 364/380 (95.79%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G 
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGVIGA 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
            +PPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPGQP AWQGQPQQ GQ+MPGSM+ P
Sbjct: 241 PVPPRPFANGTIAPSPIPAIRPPPPQGVAFPPMQMPGQP-AWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMPPPPPQAP HSM IPPPMGMGG QPPLWRPPP PMQ QQQ GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPPPPPQAPAHSMQIPPPMGMGGAQPPLWRPPPPPMQMQQQPGRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPP NHIPPP  SSG
Sbjct: 361 SSMPPPPP-NHIPPPLQSSG 378

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy TrEMBL
Match: A0A5D3DJ06 (Splicing factor 3B subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00160 PE=3 SV=1)

HSP 1 Score: 695 bits (1793), Expect = 1.61e-251
Identity = 357/380 (93.95%), Postives = 362/380 (95.26%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G 
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
            +PPRPFANG I P+PIPAIRP PPQGVAFPPM M GQPPAWQGQPQQ GQ+MPGSM+ P
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGG QPPLWRPPP PMQQQQ  GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPMPPPQAQAHSMPIPPPMGMGGAQPPLWRPPPPPMQQQQP-GRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPPPNHIPPP PSSG
Sbjct: 361 SSMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Cp4.1LG08g05600 vs. ExPASy TrEMBL
Match: A0A0A0LAZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G172960 PE=3 SV=1)

HSP 1 Score: 691 bits (1784), Expect = 3.80e-250
Identity = 356/380 (93.68%), Postives = 361/380 (95.00%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGTMGT 240
           NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G 
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGA 240

Query: 241 LMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMMLP 300
            +PPRPFANG I P+PIPAIRP PPQGVAFPPM M GQPPAWQGQPQQ GQ+MPGSM+ P
Sbjct: 241 PVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQQPGQMMPGSMIPP 300

Query: 301 PVQQFRPPPPNMPPPPPQAPGHSMPIPPPMGMGGGQPPLWRPPPLPMQQQQQQGRPPMQM 360
           PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGG QP LWRPPP PMQQQQ  GRPPMQM
Sbjct: 301 PVQQFRPPPPNMPLPPPQAQAHSMPIPPPMGMGGAQPQLWRPPPPPMQQQQP-GRPPMQM 360

Query: 361 SSMPPPPPPNHIPPPHPSSG 380
           SSMPPPPPPNHIPPP PSSG
Sbjct: 361 SSMPPPPPPNHIPPPLPSSG 379

[Close]
BLAST of Cp4.1LG08g05600 vs. TAIR 10
Match: AT2G18510.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 481.5 bits (1238), Expect = 6.3e-136
Identity = 277/382 (72.51%), Postives = 291/382 (76.18%), Query Frame = 0 

Query: 1   MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60
           MTT+IAPGVGANLLGQH+ ERNQDAT YVG LD Q+SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1   MTTRIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDR 60

Query: 61  VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120
           VTNLHQ YGFIE+RSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLFIGNLD
Sbjct: 61  VTNLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180
           PDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL 
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180

Query: 181 NRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGTM 240
           NRQITVSYAYKKDTKGERHGTPAER+LAA+NP  QKSRPHTLFA GPP+     Q NG  
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATNPTAQKSRPHTLFAMGPPS--SAPQVNGL- 240

Query: 241 GTLMPPRPFANGGIAPSPIPAIRPPPPQGVAFPPMQMPGQPPAWQGQPQQQGQIMPGSMM 300
                PRPFANG + P PIPA R PPP     PP     QPP+W  QPQQ         M
Sbjct: 241 -----PRPFANGSMQPVPIPAPRQPPPP----PPQVYQTQPPSWPSQPQQHS-------M 300

Query: 301 LPPVQQFRPPPPNMPPPPPQAPGHSM------PIPPPMGMGGGQPPLWRPPPLPMQQQ-- 360
           +PP  QFRPP    PPPPPQ   H        P PPP  MG  Q   W  PP  MQQQ  
Sbjct: 301 VPPPMQFRPPQGMPPPPPPQFLNHQQGFGGPRPPPPPQAMGMHQHGGW--PPQHMQQQGG 360

Query: 361 -QQQGRPPMQMSSMPPPPPPNH 372
             QQ +PP Q   M  PPPP H
Sbjct: 361 PPQQQQPPYQHHHMSMPPPPPH 361

[Close]
BLAST of Cp4.1LG08g05600 vs. TAIR 10
Match: AT4G34110.1 (poly(A) binding protein 2 )

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-30
Identity = 73/164 (44.51%), Postives = 105/164 (64.02%), Query Frame = 0 

Query: 24  DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAI 83
           + + YVG+LD  V++  L++ F Q G VV V V +D VT    GYG++ F + +DA  AI
Sbjct: 35  NTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAI 94

Query: 84  KVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 143
           + LN I LYGKPIRV  + +D      GA N+FI NLD  +D K L+DTFS+FG IV + 
Sbjct: 95  QELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIV-SC 154

Query: 144 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV 187
           K+  D  +G S+G+GF+ Y + E++  AIE +NG  L ++Q+ V
Sbjct: 155 KVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYV 196

[Close]
BLAST of Cp4.1LG08g05600 vs. TAIR 10
Match: AT1G49760.1 (poly(A) binding protein 8 )

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-30
Identity = 71/175 (40.57%), Postives = 109/175 (62.29%), Query Frame = 0 

Query: 28  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLN 87
           YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN
Sbjct: 48  YVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELN 107

Query: 88  MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 147
            + L G+ IRV  + +D      G  N+FI NLD  +D K L++TFSAFG I+ + K+  
Sbjct: 108 FMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPIL-SCKVAV 167

Query: 148 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER 199
           DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Sbjct: 168 DP-SGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEK 220

[Close]
BLAST of Cp4.1LG08g05600 vs. TAIR 10
Match: AT1G49760.2 (poly(A) binding protein 8 )

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-30
Identity = 71/175 (40.57%), Postives = 109/175 (62.29%), Query Frame = 0 

Query: 28  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLN 87
           YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN
Sbjct: 48  YVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELN 107

Query: 88  MIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMR 147
            + L G+ IRV  + +D      G  N+FI NLD  +D K L++TFSAFG I+ + K+  
Sbjct: 108 FMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPIL-SCKVAV 167

Query: 148 DPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER 199
           DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Sbjct: 168 DP-SGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEK 220

[Close]
BLAST of Cp4.1LG08g05600 vs. TAIR 10
Match: AT1G22760.1 (poly(A) binding protein 3 )

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-28
Identity = 65/189 (34.39%), Postives = 114/189 (60.32%), Query Frame = 0 

Query: 18  APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEE 77
           A + + +++ Y G+LDP+V+E  L++LF     VV+V V +D+      GY +I F +  
Sbjct: 42  ADQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPN 101

Query: 78  DADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFG 137
           DA  A++ LN   L+ +PIR+  +++D  + L    N+FI NLD  +D K L++TFS+FG
Sbjct: 102 DAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 161

Query: 138 VIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG 197
            I+ + K+  D  TG S+G+GF+ ++  E++ AAI+ +NG  + ++Q+ V +  ++  + 
Sbjct: 162 TIL-SCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERA 221

Query: 198 ERHGTPAER 206
               TP  R
Sbjct: 222 RDENTPTPR 227

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g05600 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q154271.3e-9354.98Splicing factor 3B subunit 4 OS=Homo sapiens OX=9606 GN=SF3B4 PE=1 SV=1[more]
Q8QZY91.3e-9354.98Splicing factor 3B subunit 4 OS=Mus musculus OX=10090 GN=Sf3b4 PE=1 SV=1[more]
Q6AYL51.3e-9354.98Splicing factor 3B subunit 4 OS=Rattus norvegicus OX=10116 GN=Sf3b4 PE=2 SV=1[more]
Q094423.6e-8854.10Splicing factor 3B subunit 4 OS=Caenorhabditis elegans OX=6239 GN=sap-49 PE=1 SV... [more]
O141024.1e-6346.32Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATC... [more]
BLAST of Cp4.1LG08g05600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023540813.16.77e-274100.00splicing factor 3B subunit 4 [Cucurbita pepo subsp. pepo][more]
XP_022948089.16.49e-27299.47splicing factor 3B subunit 4-like [Cucurbita moschata] >KAG6597617.1 Splicing fa... [more]
XP_022972146.17.83e-26998.69splicing factor 3B subunit 4-like [Cucurbita maxima][more]
XP_022138265.13.91e-25294.74splicing factor 3B subunit 4 [Momordica charantia][more]
XP_038878136.12.26e-25193.95splicing factor 3B subunit 4 [Benincasa hispida][more]
BLAST of Cp4.1LG08g05600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G8U23.14e-27299.47splicing factor 3B subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451774 ... [more]
A0A6J1I5603.79e-26998.69splicing factor 3B subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470774 PE... [more]
A0A6J1C8Z71.89e-25294.74splicing factor 3B subunit 4 OS=Momordica charantia OX=3673 GN=LOC111009481 PE=3... [more]
A0A5D3DJ061.61e-25193.95Splicing factor 3B subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0LAZ03.80e-25093.68Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G172960 PE=3 SV=1[more]
BLAST of Cp4.1LG08g05600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G18510.16.3e-13672.51RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G34110.11.2e-3044.51poly(A) binding protein 2 [more]
AT1G49760.11.6e-3040.57poly(A) binding protein 8 [more]
AT1G49760.21.6e-3040.57poly(A) binding protein 8 [more]
AT1G22760.13.3e-2834.39poly(A) binding protein 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 313..329
score: 32.94
coord: 226..242
score: 30.59
coord: 289..310
score: 28.18
coord: 334..351
score: 27.78
coord: 357..380
score: 30.0
coord: 251..263
score: 30.77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..279
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..294
NoneNo IPR availablePANTHERPTHR15241:SF330SPLICING FACTOR 3B SUBUNIT 4coord: 1..356
NoneNo IPR availablePANTHERPTHR15241TRANSFORMER-2-RELATEDcoord: 1..356
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 26..99
e-value: 2.2E-25
score: 100.3
coord: 113..187
e-value: 1.4E-24
score: 97.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 28..97
e-value: 2.0E-19
score: 69.2
coord: 114..184
e-value: 5.0E-20
score: 71.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 112..191
score: 17.267626
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 25..103
score: 18.563835
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 17..106
e-value: 2.2E-26
score: 94.0
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 107..204
e-value: 3.9E-26
score: 93.6
IPR034158SF3B4, RNA recognition motif 1CDDcd12334RRM1_SF3B4coord: 28..100
e-value: 6.14159E-55
score: 173.164
IPR034159SF3B4, RNA recognition motif 2CDDcd12335RRM2_SF3B4coord: 111..193
e-value: 9.66687E-63
score: 193.665
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 25..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g05600.1Cp4.1LG08g05600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0048026 positive regulation of mRNA splicing, via spliceosome
biological_process GO:0010075 regulation of meristem growth
biological_process GO:0006357 regulation of transcription by RNA polymerase II
cellular_component GO:0005689 U12-type spliceosomal complex
molecular_function GO:0003729 mRNA binding
molecular_function GO:0070063 RNA polymerase binding
molecular_function GO:0003676 nucleic acid binding