Cp4.1LG08g05120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCCGAGCGACCCGATTCCAGAGGTTTTGATCCCGCCGTCACCACGCCCGCCACCGGAAATCAACCAACAAAGCCAGAGAAGAACCCGAGCTCGAAAGCCGCCGCCGCCACCGCGGCGAGCTCCAATGTGGGGAAGGCTTTGGCTCATAGAGCAGTTTATGGAGCTCAAAAGCGGTGGACAGGAAGAAGAAGAAACCCCGTCCATGGCGTCCGGCTGCTGCCTAGCCGCCTCAGCAAAGTTTCTTTAGCTGATAACTCCTCACCCTCTGATTCTAATTTTTAA ATGAGTTCCGAGCGACCCGATTCCAGAGGTTTTGATCCCGCCGTCACCACGCCCGCCACCGGAAATCAACCAACAAAGCCAGAGAAGAACCCGAGCTCGAAAGCCGCCGCCGCCACCGCGGCGAGCTCCAATGTGGGGAAGGCTTTGGCTCATAGAGCAGTTTATGGAGCTCAAAAGCGGTGGACAGGAAGAAGAAGAAACCCCGTCCATGGCGTCCGGCTGCTGCCTAGCCGCCTCAGCAAAGTTTCTTTAGCTGATAACTCCTCACCCTCTGATTCTAATTTTTAA ATGAGTTCCGAGCGACCCGATTCCAGAGGTTTTGATCCCGCCGTCACCACGCCCGCCACCGGAAATCAACCAACAAAGCCAGAGAAGAACCCGAGCTCGAAAGCCGCCGCCGCCACCGCGGCGAGCTCCAATGTGGGGAAGGCTTTGGCTCATAGAGCAGTTTATGGAGCTCAAAAGCGGTGGACAGGAAGAAGAAGAAACCCCGTCCATGGCGTCCGGCTGCTGCCTAGCCGCCTCAGCAAAGTTTCTTTAGCTGATAACTCCTCACCCTCTGATTCTAATTTTTAA MSSERPDSRGFDPAVTTPATGNQPTKPEKNPSSKAAAATAASSNVGKALAHRAVYGAQKRWTGRRRNPVHGVRLLPSRLSKVSLADNSSPSDSNF Homology
BLAST of Cp4.1LG08g05120 vs. NCBI nr
Match: KAG6597562.1 (hypothetical protein SDJN03_10742, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162 bits (411), Expect = 6.10e-50 Identity = 89/98 (90.82%), Postives = 90/98 (91.84%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. NCBI nr
Match: KGN57150.1 (hypothetical protein Csa_011148 [Cucumis sativus]) HSP 1 Score: 89.7 bits (221), Expect = 7.50e-21 Identity = 64/96 (66.67%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. NCBI nr
Match: KAA0049530.1 (hypothetical protein E6C27_scaffold171G007850 [Cucumis melo var. makuwa] >TYK16208.1 hypothetical protein E5676_scaffold209G001370 [Cucumis melo var. makuwa]) HSP 1 Score: 81.6 bits (200), Expect = 9.80e-18 Identity = 61/93 (65.59%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. NCBI nr
Match: KAG2726969.1 (hypothetical protein I3760_01G138000 [Carya illinoinensis]) HSP 1 Score: 62.4 bits (150), Expect = 2.44e-10 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. NCBI nr
Match: KAG6668024.1 (hypothetical protein CIPAW_01G142300 [Carya illinoinensis]) HSP 1 Score: 60.8 bits (146), Expect = 9.83e-10 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. ExPASy TrEMBL
Match: A0A0A0L5C0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G165670 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.63e-21 Identity = 64/96 (66.67%), Postives = 69/96 (71.88%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. ExPASy TrEMBL
Match: A0A5A7U2I2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001370 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.74e-18 Identity = 61/93 (65.59%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. ExPASy TrEMBL
Match: A0A5C7I2V2 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010332 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 1.07e-06 Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. ExPASy TrEMBL
Match: A0A2N9HF98 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38497 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.94e-06 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Cp4.1LG08g05120 vs. ExPASy TrEMBL
Match: A0A803Q4Y8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 2.81e-06 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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