Cp4.1LG08g04600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g04600
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG08: 1416873 .. 1418500 (-)
RNA-Seq Expression	Cp4.1LG08g04600
Synteny	Cp4.1LG08g04600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGTGGTGGGAAGTTGGAAGGGGTTCTTAGGGTTTTGGGATTTGGGTTAACTTTGGTGGCAGCCATTGTTGTGAGGCTTGACAAAGAAACAAAAGTGGTTCCTTTTTCTATCTCCCCCAACCTTCCTACTTTCGACGTTGTTGTGGTCGCTAAGTGGCATTACTTGTCTGCTTTTGTGTAAGCTTCTCGTTCTTTTTTTTTTTTTTTTTTTTTTAATATATATATATATATATATAACTGATACAGAACCCAACCAACCAGACCCTCCTTAACATATGATGATGATGATGATCTCTATCACTGTGGGAGAACTGGAGGAGCTATGGCGCGCGTGTTGTACGATTGGCAGTGGCTGCATTTCTGCCCGATTATGTGAAAGCACGCTTCAGTCGTGTCGTTGCAGTCGTTGCACAAAATCCATACCTGCAAAACGTAGCTCTAATTTTCTAGTTCTGATATCATGAGAGTTTTCAGAAATGGAGAAAAAAGGTTCAAGTAAAGGGAAAACAGTAAGCATTAGGCGTTTCTTTTGTACCATTGATTCATATTTAAGTGTTCATAACAAGTAAGCATCAGGTGTATGTAAAAGATAATGTCCAGAAAACAAAGATTCAAGTTGGCTGATTCAATCAGCCAACAATCTTCAGGTAAATATAACGATACGAAAGAGGACAAGGGGTTGAAGACAGCAATATAATCAGCCAACAATCTTCGGGTAAATATAAGGATACGAAAGACGACAAGGGGTTGAAGACAGTAATATAATCAGCCAACAATCTTCGGGTAAATATAACAATACNCTCGAGACCACTTACCGCTGATTTTGTGTAAGCCTCGCCTCTCTTCTTTGTTCTTTCTACGTTTTAGTCTTTCAAACTCACTCGAGATGTAACAACTCAAGCCCACTACTGCCTTCGAAAGTGAGTGCCGCACAATCGCCGCAAGAACAAATTGGCTTAGCTCACTTGTCATTGGAAAGTGANTGATACAAAAGAGGACAAGGGGTTGAGAACAAGGAGTTGAAGACAGTAAATATAATCAGCCAACAATCTTTGGGTAAATATAACGATACGAAAGACGACAAGTGGCTGAAGACANTGATTGTGTCAAGTAGTATCAGAAACATGAAGTTAGTCGAGTTCGAACCTCGAATCCAACCTCTCTCAAATGTTGAACTATGTTTCTTTCTCCGTATTTGAGCTATGTTTATGTTAGCAACCGTGTATTGGTAGTAAACATTAAAAATATATGTTTTGTTGTGAAGGTACCTTTTTGCGGCCAATGTAATTGCAAGCTTATATGGACTACTGTCGTTGGCTATTTCATTAGCAAACAAGAACCGAAGCAATATATTAGCTTTGCTGATCACCATTCTCGACCTTGTGATGGTGGTGCTGCTCTCTTCCAGCGCCGGGGCCGCCATAGCCATTGGAATTATCGGCTACCACGGTAACTCGCACGTGCGGTGGAACAAAGTGTGCGATACATTTGGTAGATTCTGCAAGCAAGTGGCAGCTGCTTCTGCTCTCTCCCTTGCTGGAGCCATCGTCTTCATGCTGTTAGTTATATTGGTTGTTGTGGGCCTTCAAAAGAGGCCCAAATAAATGGGCTTTCGGCCCTCTT

mRNA sequence

ATGAGTGGTGGTGGGAAGTTGGAAGGGGTTCTTAGGGTTTTGGGATTTGGGTTAACTTTGGTGGCAGCCATTGTTGTGAGGCTTGACAAAGAAACAAAAGTGGTTCCTTTTTCTATCTCCCCCAACCTTCCTACTTTCGACGTTGTTGTGGTCGCTAAGTGGCATTACTTGTCTGCTTTTGTGTACCTTTTTGCGGCCAATGTAATTGCAAGCTTATATGGACTACTGTCGTTGGCTATTTCATTAGCAAACAAGAACCGAAGCAATATATTAGCTTTGCTGATCACCATTCTCGACCTTGTGATGGTGGTGCTGCTCTCTTCCAGCGCCGGGGCCGCCATAGCCATTGGAATTATCGGCTACCACGGTAACTCGCACGTGCGGTGGAACAAAGTGTGCGATACATTTGGTAGATTCTGCAAGCAAGTGGCAGCTGCTTCTGCTCTCTCCCTTGCTGGAGCCATCGTCTTCATGCTGTTAGTTATATTGGTTGTTGTGGGCCTTCAAAAGAGGCCCAAATAAATGGGCTTTCGGCCCTCTT

Coding sequence (CDS)

ATGAGTGGTGGTGGGAAGTTGGAAGGGGTTCTTAGGGTTTTGGGATTTGGGTTAACTTTGGTGGCAGCCATTGTTGTGAGGCTTGACAAAGAAACAAAAGTGGTTCCTTTTTCTATCTCCCCCAACCTTCCTACTTTCGACGTTGTTGTGGTCGCTAAGTGGCATTACTTGTCTGCTTTTGTGTACCTTTTTGCGGCCAATGTAATTGCAAGCTTATATGGACTACTGTCGTTGGCTATTTCATTAGCAAACAAGAACCGAAGCAATATATTAGCTTTGCTGATCACCATTCTCGACCTTGTGATGGTGGTGCTGCTCTCTTCCAGCGCCGGGGCCGCCATAGCCATTGGAATTATCGGCTACCACGGTAACTCGCACGTGCGGTGGAACAAAGTGTGCGATACATTTGGTAGATTCTGCAAGCAAGTGGCAGCTGCTTCTGCTCTCTCCCTTGCTGGAGCCATCGTCTTCATGCTGTTAGTTATATTGGTTGTTGTGGGCCTTCAAAAGAGGCCCAAATAA

Protein sequence

MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK

Homology

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BLAST of Cp4.1LG08g04600 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.2e-39
Identity = 93/171 (54.39%), Postives = 114/171 (66.67%), Query Frame = 0


Query: 4   GGKL---EGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 63
           GGKL   + VLRV+   LTLVAA+++ +DK+TKVV   + P LP  DV V AKW YLSAF
Sbjct: 24  GGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSAF 83

Query: 64  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 123
           VY   +N IA  Y  LSL +S+ N   +  L L IT++DLVMV LL SS GAA AIG++G
Sbjct: 84  VYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLMG 143

Query: 124 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKR 172
           Y GNS VRW KVC+ FG+FC QVA A  LS  G + F LLV++    L KR
Sbjct: 144 YEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNKR 194

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-38
Identity = 86/162 (53.09%), Postives = 115/162 (70.99%), Query Frame = 0


Query: 10  VLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLFAANVI 69
           +LR+L F +TLVAAIV+ +DK+TKVVP  +S +LP  DV + AKWH +SA VY    N I
Sbjct: 25  LLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFLVTNAI 84

Query: 70  ASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHGNSHVRW 129
           A  Y +LSL ++L N+ +S  L  LI +LD  MV LL S  GAA A+G++GY GNSHV W
Sbjct: 85  ACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGNSHVNW 144

Query: 130 NKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKR 172
           NKVC+ FG+FC Q+AA+  +SL G++ F+LLVI+  V L +R
Sbjct: 145 NKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHRR 186

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.1e-38
Identity = 85/167 (50.90%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 5   GKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLF 64
           G  + +LR+L F +TLVAAIV+ +DK+TK+VP  +S + P  +V + AKWH +SAFVY  
Sbjct: 21  GVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFL 80

Query: 65  AANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHGN 124
             N IA  Y  +SL ++L N+ +S  L  LI +LD  MV LL S  GAA A+GI+GY GN
Sbjct: 81  VTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGN 140

Query: 125 SHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKR 172
           SHV WNKVC+ FG+FC Q+AA+  +SL G++ F+LLV++ VV L +R
Sbjct: 141 SHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHRR 187

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-36
Identity = 90/171 (52.63%), Postives = 120/171 (70.18%), Query Frame = 0


Query: 3   GGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVY 62
           G    + +LRVL   LTL AAIV+ +DK+TKVVP  I   LP  ++ V AKWHYLSAF Y
Sbjct: 26  GASTCDLLLRVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTY 85

Query: 63  LFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYH 122
             A+N IA  Y  LSL ++++ K    I++++I +LDL+MV +L SS GAA+AIG++GY 
Sbjct: 86  SVASNAIACSYAALSLVLAVSGK--KGIMSIVI-VLDLLMVAMLFSSNGAALAIGLMGYQ 145

Query: 123 GNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 174
           GNSHVRW KVC  FGRFC QVA + +LSL G+I+F+LLV +  + L K+ K
Sbjct: 146 GNSHVRWTKVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKKSK 193

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-34
Identity = 85/164 (51.83%), Postives = 111/164 (67.68%), Query Frame = 0


Query: 10  VLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLFAANVI 69
           VLRVL F LT  AAIV  ++ +T+ VP  ++ ++P   V VVAKWHYLSAFV+   +N I
Sbjct: 32  VLRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNAI 91

Query: 70  ASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHGNSHVRW 129
           A  Y  +S+ +S   K     +  +I  LDL+MV LL SS GAA AIG++GY GNSHV+W
Sbjct: 92  ACSYAAISVMLSFCGKKS---MVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVKW 151

Query: 130 NKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 174
           NKVC+ FG+FC QVAA+  LSL G+IVF+LLV+L    L  + K
Sbjct: 152 NKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNKSK 192

[Close]

BLAST of Cp4.1LG08g04600 vs. NCBI nr
Match: XP_023540313.1 (CASP-like protein 1E2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316 bits (810), Expect = 2.88e-108
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG
Sbjct: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
           YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Cp4.1LG08g04600 vs. NCBI nr
Match: XP_022945099.1 (CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like protein 1E2 isoform X3 [Cucurbita moschata])

HSP 1 Score: 309 bits (791), Expect = 2.27e-105
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKETKVVP+SISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASLYGLL+L ISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
           YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Cp4.1LG08g04600 vs. NCBI nr
Match: KAG6597497.1 (CASP-like protein 1E2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308 bits (788), Expect = 6.51e-105
Identity = 169/173 (97.69%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASLYGLL+L ISLANKNRSNI ALLITILDLVMVVLLSSSAGAAIAIGIIG
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNISALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
           YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Cp4.1LG08g04600 vs. NCBI nr
Match: XP_022975464.1 (CASP-like protein 1E2 [Cucurbita maxima])

HSP 1 Score: 301 bits (770), Expect = 3.61e-102
Identity = 164/173 (94.80%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKE KVVPFSISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKEAKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASL+GLLSL ISLANKNRS++LALLITILD+VMVVLLSSS GAAIAIGIIG
Sbjct: 61  VYLFAANVIASLHGLLSLTISLANKNRSDVLALLITILDIVMVVLLSSSGGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
           YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGA VFMLLVILVVVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGATVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Cp4.1LG08g04600 vs. NCBI nr
Match: XP_022945090.1 (CASP-like protein 1E2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 300 bits (768), Expect = 1.10e-101
Identity = 169/185 (91.35%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLS-- 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKETKVVP+SISPNLPTFDVVVVAKWHYLS  
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSDV 60

Query: 61  ----------AFVYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSS 120
                     AFVYLFAANVIASLYGLL+L ISLANKNRSNILALLITILDLVMVVLLSS
Sbjct: 61  VVVAKWHYLSAFVYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSS 120

Query: 121 SAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL 173
           SAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL
Sbjct: 121 SAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL 180

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy TrEMBL
Match: A0A6J1G003 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1)

HSP 1 Score: 309 bits (791), Expect = 1.10e-105
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKETKVVP+SISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASLYGLL+L ISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
           YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy TrEMBL
Match: A0A6J1IKK8 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474830 PE=3 SV=1)

HSP 1 Score: 301 bits (770), Expect = 1.75e-102
Identity = 164/173 (94.80%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKE KVVPFSISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKEAKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASL+GLLSL ISLANKNRS++LALLITILD+VMVVLLSSS GAAIAIGIIG
Sbjct: 61  VYLFAANVIASLHGLLSLTISLANKNRSDVLALLITILDIVMVVLLSSSGGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
           YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGA VFMLLVILVVVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGATVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy TrEMBL
Match: A0A6J1FZX5 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1)

HSP 1 Score: 300 bits (768), Expect = 5.34e-102
Identity = 169/185 (91.35%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLS-- 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKETKVVP+SISPNLPTFDVVVVAKWHYLS  
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSDV 60

Query: 61  ----------AFVYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSS 120
                     AFVYLFAANVIASLYGLL+L ISLANKNRSNILALLITILDLVMVVLLSS
Sbjct: 61  VVVAKWHYLSAFVYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSS 120

Query: 121 SAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL 173
           SAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL
Sbjct: 121 SAGAAIAIGIIGYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL 180

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy TrEMBL
Match: A0A6J1I8B7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111472304 PE=3 SV=1)

HSP 1 Score: 276 bits (707), Expect = 4.79e-93
Identity = 152/162 (93.83%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSGGGKLEGVLRVLGF LTLVAAIVVRLDKE KVVPFSISPNLPTFDVVVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKEAKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120
           VYLFAANVIASLYGLLSL ISLANKNRS++LAL ITILD+VMVVLLSSS GAAIAIGIIG
Sbjct: 61  VYLFAANVIASLYGLLSLTISLANKNRSDVLALPITILDIVMVVLLSSSGGAAIAIGIIG 120

Query: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVI 162
           YHGNSHVRWNKVCDTFGRFCKQ AAASALSLAGA VFMLLVI
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQGAAASALSLAGATVFMLLVI 162

[Close]

BLAST of Cp4.1LG08g04600 vs. ExPASy TrEMBL
Match: A0A5A7U2H8 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00470 PE=3 SV=1)

HSP 1 Score: 235 bits (600), Expect = 1.42e-76
Identity = 130/174 (74.71%), Postives = 148/174 (85.06%), Query Frame = 0


Query: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60
           MSG GKLE +LRVLGF L+LVAAIVV +DKETKVVP +IS NLP F +VVVAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  VYLFAANVIASLYGLLSLAISLANKNRSN-ILALLITILDLVMVVLLSSSAGAAIAIGII 120
           VY FA NVIASLYGLLSL ++L+NKN SN +L LL+ +LD V V LLSS AGAA+AIG+I
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 GYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173
            Y GNSHVRWNKVCD FG+FCKQVAA++ LSLAGAIVF+LLVIL +VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Cp4.1LG08g04600 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 134.8 bits (338), Expect = 6.6e-32
Identity = 84/164 (51.22%), Postives = 108/164 (65.85%), Query Frame = 0


Query: 2   SGGGK-LEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 61
           SG  K LE  +RVL   LT+VAA V+ + K+TKVVP  + P LP  +V   AK  YLSAF
Sbjct: 21  SGSRKGLELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAF 80

Query: 62  VYLFAANVIASLYGLLSLAISLANK-NRSNILALLITILDLVMVVLLSSSAGAAIAIGII 121
           VY  +AN IA  Y  +S+ I + +K  RS  L + + I DL+MV LL SS GAA AIG++
Sbjct: 81  VYNISANAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLM 140

Query: 122 GYHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVIL 164
           G HGN HV W KVC  FG+FC Q A + A++L  ++VFMLLV+L
Sbjct: 141 GRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVL 184

[Close]

BLAST of Cp4.1LG08g04600 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-29
Identity = 76/163 (46.63%), Postives = 103/163 (63.19%), Query Frame = 0


Query: 7   LEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLFAA 66
           +E  +RVL   LT+ AA V+ + K+TKVV   + P LP  D+   AK  YLSAFVY  + 
Sbjct: 27  VELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISV 86

Query: 67  NVIASLYGLLSLAISLANKNRSNILALLITIL-DLVMVVLLSSSAGAAIAIGIIGYHGNS 126
           N IA  Y  +S+AI + ++ R +   L++ +L DLVMV LL S  GAA AIG++G HGN 
Sbjct: 87  NAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNK 146

Query: 127 HVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGL 169
           HV W KVC  FG+FC + A +  L+L  A+VFM LV+L  + L
Sbjct: 147 HVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]

BLAST of Cp4.1LG08g04600 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 57/158 (36.08%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 11  LRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLFAANVIA 70
           LR+  F  TL AAIV+ L+KETK +  +    +P     + AK+ +  AFV+   ANV+ 
Sbjct: 22  LRIFAFMATLAAAIVMSLNKETKTLVVATIGTVP-IKATLTAKFQHTPAFVFFVIANVMV 81

Query: 71  SLYGLLSLAISLANK--NRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHGNSHVR 130
           S + LL + + + ++      +  L I ILD++   L+S++A AA+ +  +G +GN H +
Sbjct: 82  SFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNGNKHAK 141

Query: 131 WNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVV 167
           WNKVCD F  +C   A A   + AG ++ MLLV  V +
Sbjct: 142 WNKVCDRFTTYCDHGAGAIIAAFAG-VILMLLVSAVSI 177

[Close]

BLAST of Cp4.1LG08g04600 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16
Identity = 54/152 (35.53%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 11  LRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAFVYLFAANVIA 70
           LR+L F  TL AAIV+ L+KETK        N P       AK+ +  AFV+   AN + 
Sbjct: 22  LRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTP-IQATFTAKFDHTPAFVFFVVANAMV 81

Query: 71  SLYGLLSLAISL--ANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIGYHGNSHVR 130
           S + LL +A+ +       +    L + ILD++ V L+S++A AA  +  +G +GN H R
Sbjct: 82  SFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKHAR 141

Query: 131 WNKVCDTFGRFCKQVAAASALSLAGAIVFMLL 161
           W+K+CD F  +C   A A   + AG I+ +++
Sbjct: 142 WDKICDRFATYCDHGAGALIAAFAGVILMLII 172

[Close]

BLAST of Cp4.1LG08g04600 vs. TAIR 10
Match: AT3G06390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 74.7 bits (182), Expect = 8.1e-14
Identity = 56/170 (32.94%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 6   KLEGVLRVLGFGLTLVAAIVVRLDKETKVVPF-SISPNLPTFDVVVVAKWHYLSAFVYLF 65
           K++ + RVL F  TL A IV+    +T++     +S   P     V A+++   AF+Y  
Sbjct: 36  KIDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAP-----VSAEFNDSPAFIYFV 95

Query: 66  AANVIASLYGLLSLAISLANKNRSNILA---LLITILDLVMVVLLSSSAGAAIAIGIIGY 125
            A V+AS Y L+S  +S++   +    A   + +  LD+VM+ +L+S+ G A  +  I  
Sbjct: 96  VALVVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIAL 155

Query: 126 HGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKR 172
            GN  V WNK+C+ + +FC+ +A + ALSL  ++  +LLV+ +   L KR
Sbjct: 156 KGNEEVGWNKICNVYDKFCRYIATSLALSLFASL--LLLVLSIWSALSKR 198

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g04600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7NW78	9.2e-39	54.39	CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1	[more]
C6SZP8	1.6e-38	53.09	CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6TBD0	2.1e-38	50.90	CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9HMP6	1.5e-36	52.63	CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S...	[more]
B9RT04	1.4e-34	51.83	CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g04600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540313.1	2.88e-108	100.00	CASP-like protein 1E2 [Cucurbita pepo subsp. pepo]	[more]
XP_022945099.1	2.27e-105	97.69	CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like ...	[more]
KAG6597497.1	6.51e-105	97.69	CASP-like protein 1E2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022975464.1	3.61e-102	94.80	CASP-like protein 1E2 [Cucurbita maxima]	[more]
XP_022945090.1	1.10e-101	91.35	CASP-like protein 1E2 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG08g04600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G003	1.10e-105	97.69	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1	[more]
A0A6J1IKK8	1.75e-102	94.80	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111474830 PE=3 SV=1	[more]
A0A6J1FZX5	5.34e-102	91.35	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1	[more]
A0A6J1I8B7	4.79e-93	93.83	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111472304 PE=3 SV=1	[more]
A0A5A7U2H8	1.42e-76	74.71	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]

BLAST of Cp4.1LG08g04600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15630.1	6.6e-32	51.22	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	3.1e-29	46.63	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	3.5e-17	36.08	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.0e-16	35.53	Uncharacterised protein family (UPF0497)	[more]
AT3G06390.1	8.1e-14	32.94	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 10..165 e-value: 1.1E-41 score: 140.2
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..155 e-value: 3.2E-37 score: 127.6
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..171
None	No IPR available	PANTHER	PTHR11615:SF253	CASP-LIKE PROTEIN 1E1	coord: 7..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g04600.1	Cp4.1LG08g04600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding