Cp4.1LG08g04560 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g04560
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tubby-like F-box protein
Location	Cp4.1LG08: 1432750 .. 1439069 (-)
RNA-Seq Expression	Cp4.1LG08g04560
Synteny	Cp4.1LG08g04560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTTTGAAGAATTTATTTTAATTTATTGAAGAGTTAAATAATGTGAAAGAGTAGAAGAAAGCAAAGGTCTGGAATTTTTCAGAGGCAATTAGGCTTTTCAGTAGACATCACAATCCTCTACTCGATTCTTACCTTCTACAAACCAACACTGTTCTTCTCTTTCTCTTCCAAATCCCAATCCTTTCCACTTTTGAATTCTTCCGGGAAATTTCTTCAATTTTCTCGCCAAGATTCCTTTCGTTTTCCCCAACTTCTTCACTCTCTCCTTCGATTCTGGCTTCTCTTCGTTCACAAAGGCTTTGTATGAGAAGGACTGTTGCCATACAATTCGGTTTCCATGTCTTTGAAGAGCATAATTCAGGAAATGAGATCCAGGTCCCGCCGTGTGGTGCAGGATGGATCGACGGCCGAAGTCGGTGATGGTTTGGCGCAGAGCTGTTGGGTTCACATGCCTCAGGAGTTGCTGAGAGAGGTTTTGATTAGAATCGAGAGCTCTGAGAATGCTTGGCCTCCGCGGAAGAGCGTCGTGGCTTGCGCTGGAGTTTGCCGGAGCTGGAGACGGATTACTAAGGAGATTGTTAAAACTCCCGAGGTTTCTGGCACATTGACGTTTCCTATCTCCGTCAAGCAGGTTTGGGATCTCAAACTCGTTTTAATTTTCTGATTCTTTTTGCGTCGCTTTGAATTTGATGTTCTAAATGTAATTCGCGACTCCGTTTGGTTTTTGTTCCTGTGTTTTAATCGAATTATCGAACCAAGCCTCTCCATACTACTGTGTGTTCTCTGTTCCTAAAATTCAGCGGGCGAACTTGTTAATGCTGGCGTATTTTTCGCTTAGGGTGCTGATTCATGATTGTCCATTATTAGCAATCGTCATGTATGGTTTTCCTTTTCTAGATTCACATATCCTGTTATCCTGTTTATCTTTCCCTGTAGAGCATATTTCTGGAGTGTATTCTAGGTTAACTTATTCTCAAAACTAGAAACGAATCTTCCTGTTCAAGATCTGGGATTAAGATGAACAGATTTAGTTTATAATTCCTTTCTTGTATTGGTATTTATCGTGTTTATCTTTTGGGATAAAGAAATCTGCGTGCATATTTTTATCAAATTTCTATATTAATTCGTTCGTTATTGCTATAGAAAGCATGACTTTGTTCTAAAATTAGCTTATGGAGAAAACACGAGTTTAGGAAAATTCAACTCGTGTATGAATTGAGTCTCTGATTTGGTGGTGGTTGTGGTGTTTGCAACATCTCACATACATTTCCAGTTTCTCAAATTTGTCGTTTATCATGTGGAATTCTTTCTAAGAGACATGAAATTGGCAACAAAAGTTATCGCTACCTTTTTAGGGGCCACGTTTAGCAGCAATGCTTTAGGTCCACTCTAATTATTGGCTTCTACTTTATGAGAGTGCTGCGCACTATTTCCTTCACATATGTATGTATAAATATAGGGATAACTTGTTGAGTGTTATATAAGTTTTTCCATTATTGCAGTTCCAGTTTCTGGTGAAATCAATTAATTGGATTAACTATTTGAACTACTTGTTTTTCCTTTCTGGGTTTTCTTATATACACATGCATACATTCATATATATATGCATTTGCTTAAACATGCTTATATTTATTGGTTTATTTATTTTGAAATGATAGTTTGTCTAGAACTGATTAGAGAAAATTATTTATTTACTTTTTGAAATTTTATTAGATTTGAAGTTTCTACGACACCACATTCCTTCTTATCTTTGTATTTTTTTTCAAAAAATTTATTATTATTATTTTTGCTTGGCAGCCTGGTCCAAGGGATTTGCTTCTTCATTGTTTCATAAAACGGAATCGATCCGCACAAACTTATTGCCTTTATCTTAGTTTGACGAGTGGTAAGCTTCCATACCTAAAGCAAGTTGCTTGACACTTTCCTTCCTTCCTTATTCTATTGGGTGTTTATTGGATTAATTGTAAGATTGTTTTTAGGAGTTCATTAGTCAGTTGTGAGAATATTTGCTAAAACCACCGCAACTAAATCGTGTGAAAGTTCTCTATTTATAATCATTTAGAGAATCAAATAAATTATAAATGATATAGAAAGAACAATAAATGGAAAGAGCAATAAATGGGTACAAGATATTTGTAAGGTCAAATATGATACCTATGGTAAGCTGTAATGGAGGACTAAATATCCTTAATAAGATGCTTTAACTCTTAGCTGGGGGCTTTTTTTTTTTGTATCTTTCAAGGGTATTGACCTCCTTTTTAGATTTTATAGCGTATATAGTTATGTTTTATGGGGGAAAGGGGATGGGGGCACATAGAAAGTGACTCATTTTTGGCCTTTGGTTTTGGCGACAGCACTTGCTGACGATGGAAAGTTTCTTCTTGCTGCCCGGAAGTGTCGACGGGCCACCTGCACTGATTATATAATATCACTGCATGCTGATGACATGTCCAAGGCAAGTGGCACCTTTATTGGAAAATTAAGGTAGGGCTCCAGGAAGCGTTTGATGTTGACTGTACGATTATTTATTTATTTTTGTATTAACTCAAATATTAATTAATTTTTCTTTCAAAGATCTAACTTTTTAGGAACCAAGTTCACAATCGTTGATGGACAGCCACCTCATGCGGGAGCCAAGATCTCAAGAAGTCGCTCCTCTAGGCTTGTAGGCCTGAAACAAGTGTCACCTAGAGTTCCTGCCGGCAACTACCCTGTGGCTCACATCTCATATGAGTTAAATGTCTTGGGTTCAAGGTACATATGAGTTAAATGTCTTGGGTTCAAGGTACATATGAATAGACTTGAGTCTTTCTTTGTGAATCGTGCTGTTCATCCAGAAAACGATCTGTTATCAAGATGTATTACTCGCATAATTAAAATAAACCCCTCCAATAAAAGGTTGTTTGTCATTGTATATGTAATACTTTGTGCTGAATGAGCTAGATACGCACTAATCTGCTTTTGCCTTGTTTCTGTATTAACCAGATACTGTTAGAGCTTTTTTATTCCTGTGTGTTGCTTTAGAGAGGCTAATATGGAGTATGTCATCATCAGGGGTCCAAGAAGAATGCATTGCGTCATGGATGCTATTCCTGCCTCTGCTATTGAACCAGGAGGGGTGGCTCCAATACAGACCGAATTCTCCTCAAGCCGTATAGACTTTCTTCCATCGATGAGATTTTCCTGGTCGAAATCGAATGAACCAAATCACACCGACGATCAATCATCGGGATCTTCATCCAATCAGAAAGATGGACTTCTGGTGCTCAGAAACAAGGCTCCGCGGTGGCACGAACAGCTCCAATGTTGGTGTTTGAACTTTCACGGACGAGTGACAATTGCTTCAGTGAAAAACTTTCAGTTAGTAGCTTCACCTGAAAATGGACCTGCCGGACCTGAACATGAGAAGATCATCCTTCAATTTGGAAAAGTAGGAAAGGATATATTTACAATGGACTACAGGTATCCAATCTCAGCGTTTCAGGCCTTCGCCATCTGCCTCAGCAGCTTTGACACAAAGATCGCTTGTGAATGACACATCTCCGAGCAGGTTCTACACGTTTAAATTTTGAGCTCGTTTAATAAAATCCTATACACTTTATCCTTTTGGGACATTTGATGGTCATTATTCTGATTTCTTGGTTAACTTCTACAATAGGACCAAGTTAGTGAAGGCAGTGGGATTTTCTCTCAACAACAAGAACTATTGAACGGGTTCCAGCAATTAGCGTGTATCATAAAAGACCCTTAAATCGAAAATGGGGGCTTAAATGGAAGCCAGACTTTGAATTTCAGAGCTCATTCTCCAATTTTTGGTAACCTTTTGTGTCCTTATCCACAGTACACATTGAATATTTACTGTCTTTGATGTAAATATGAACTCTTTTGTATGATCTGATGCACCAAAAAAAGAAAAAAAAAGAAAAAAAGGAAGGGCTCCATTCCTTGACAATAATTGGTATAACTTTATAGGTGCTTGATATTTATCTTTCATTTTGTGTTTGTCTTTGACGATCTGTTACTTCATCGGAATCTTCGTCGATGACGTCCACCCACACTCCCTTTGTTAGTGAATGGGCCGATGGCTGAGGGATCGCCAATTGTGATGCAGATTTTGAGGTACGCTATTTTTTTGTTCTATGGTTTCAGATAATTAAACGTTACAGATGGAGGAAATATGTGGACCCCAAAGATCATTACCAAAATTATGAAATTAATTGGTTAAATTATATGTTTTGTGTTCATTTATTTCATCTTTGAATTTTAATATTCAAATATTTTTAAAATTGTTCTAAATGTATATTTTAATGAATAGTAAAGACTCGTGACTAGTTATAGAGGTCCTTTGGTAGAGGAAATAGTGTTATTCTTTGGTTTTATGATCGTTTATTTGGTTGGATTCGGAGATTTTAGTGTTAATGTTTATTTTTTACCATTATTATTAGTGTTAATGTTTATTTTTTACCATTATTATTTTGAGAGAGTATATATCTTAATTAAATTAAGGTTAAGATCGGAGTATATATCATTAAGGTTACAGATCGGAGTATATAGAGCATAACTCCACTCCACATTGTTGTACTTTTAACCGATTTAAAGCATAACTCCCAACTTCAACGTATCGACTATGAGGATGTATAGGAGCTATTAGAAACAGAGATTTCATTGAATTTGGAAATCCTCCAGATCCCATGAAGCAAATGAATTCAAAGGATCATTGAAGGGTTTCCAAAGACAAATTTTATTGATATTTTCAATAAGCTAATATAGTTTAGTAGGACTTTGAAATATACAAACCAGCGAAGCATCTGATCTTACAAGAATATAGAAAACTGAAAATTTTAAAAATGAGAAATGATATACTCTACCATTCCGAAGAATTCAATCGAATTTCCCAGGCTTGACCTTACAGATGCTGGATTAAGATCTCTTCGAGGAGCTATCTGAAGCTCATCCGAGATCGTCGATAACGTTTTCGTGTATTAGATACGAGCAGAATTTTTATCCTTATTCAAGTCCTTGGATGATGATCTTGATGAATGACCTGCGGTGTGTTTTCTCCTTCTTGGAGGAGCACCAACGGCACCTGGGTCCATCAAGGGACCAGACCATGTTTGGATGCTTGCTTTTGGATACGAGAAATTCATGGTGCTAAATGGAACGTCGGGAGGATCATAGATCGGATCGACGTGATGCGAAGATCCCAGTTGGTAGCCAATCGCTCCGTCTTGATGTGGAGGAGGAAACTTTTCACTCTTGCTCTTCGCATTTGCGTGTGTTATGAGACGTCGTCTCTGTAGAGAGCATCGATGAAAATCAAATCACCAATCATATGAATTGAGCGTAAAATAGAAAGAAATCGAGTAAGGCGTACATACATCGAGATTGGCTTGAAGCTCAGCATTGGCTTCTGGAGCAGGAATTGCCCGAACAGCTCGATCACGTGCCCGTGTTCTCTTCACTCCATCTGCATTGCTTCTGCCAACAGCTCTTAGCCTGCACTCACACAGCTCAATCAAAGTCAGAAAAAATGTAAATTCATTTTATCCACTGTTTATCCTAATAACGAACAAGACGTTGGGTCTTAATCGGTCATCGACCTTCTAGCTTCTTCGTCCCGTAGTTTTGCATCCATTTCCTTGCTTGGAGGATACTTAGGAAGACTGGAAGGCTCACAAGCATATGGCTTTGTAGTGAAAAACTGCAAAAACAGAACAAAGTTCACAAAAATGTCTATGAACAAGAGAAATAAAGCAAGAACTACAAAAAAAAAAAAAAAAAAAAAANCTGCTATAATCAGCTTCCGAGGTTACTAAAACGACACGTGCTTTCTCTTCTCCTTCTCGGGGGGAGTAAATATGTGTCGATGAATGATAGGGTAAAAAACAATACTCCGTGGCATGCGCCGTAGATCTAATGGGTGAAAACTACTAGCCATGGAGCAAGATGATTCCTATGATGAAGAGAGACCTACTTAACGTATTTTCCGAACTGTTCTAAGTTTCTAAGAATCGATCATATCGTTATTTAATACCTACGATGCAGAGATTCAGTAGACAGCTCATCGGATAGTTTAAAAAACGATACGATGTGTATGCAACAGCATAATGTATAAACTCACTTCACTATGTAAAGCAGCCGTGGCAGTTAGGCGTTCAGCGGGGTCGATGGCGAGAAGCGTCTCGATTAGTGGCAGAGATGACGGCGGGAAGTCTTTAAACGTCTCTGCTATGCATCTCTTGTATGAATGTTGAGGCTTGAATATGGTTGCATGAGGCAATCTCGACTTTTTCCAGTATTCTTCTGTAGGAGAGCCAC

mRNA sequence

CAATTTTGAAGAATTTATTTTAATTTATTGAAGAGTTAAATAATGTGAAAGAGTAGAAGAAAGCAAAGGTCTGGAATTTTTCAGAGGCAATTAGGCTTTTCAGTAGACATCACAATCCTCTACTCGATTCTTACCTTCTACAAACCAACACTGTTCTTCTCTTTCTCTTCCAAATCCCAATCCTTTCCACTTTTGAATTCTTCCGGGAAATTTCTTCAATTTTCTCGCCAAGATTCCTTTCGTTTTCCCCAACTTCTTCACTCTCTCCTTCGATTCTGGCTTCTCTTCGTTCACAAAGGCTTTGTATGAGAAGGACTGTTGCCATACAATTCGGTTTCCATGTCTTTGAAGAGCATAATTCAGGAAATGAGATCCAGGTCCCGCCGTGTGGTGCAGGATGGATCGACGGCCGAAGTCGGTGATGGTTTGGCGCAGAGCTGTTGGGTTCACATGCCTCAGGAGTTGCTGAGAGAGGTTTTGATTAGAATCGAGAGCTCTGAGAATGCTTGGCCTCCGCGGAAGAGCGTCGTGGCTTGCGCTGGAGTTTGCCGGAGCTGGAGACGGATTACTAAGGAGATTGTTAAAACTCCCGAGGTTTCTGGCACATTGACGTTTCCTATCTCCGTCAAGCAGCCTGGTCCAAGGGATTTGCTTCTTCATTGTTTCATAAAACGGAATCGATCCGCACAAACTTATTGCCTTTATCTTAGTTTGACGAGTGCACTTGCTGACGATGGAAAGTTTCTTCTTGCTGCCCGGAAGTGTCGACGGGCCACCTGCACTGATTATATAATATCACTGCATGCTGATGACATGTCCAAGGCAAGTGGCACCTTTATTGGAAAATTAAGATCTAACTTTTTAGGAACCAAGTTCACAATCGTTGATGGACAGCCACCTCATGCGGGAGCCAAGATCTCAAGAAGTCGCTCCTCTAGGCTTGTAGGCCTGAAACAAGTGTCACCTAGAGTTCCTGCCGGCAACTACCCTGTGGCTCACATCTCATATGAGTTAAATGTCTTGGGTTCAAGGTACATATGAGTTAAATGTCTTGGGTTCAAGGGGTCCAAGAAGAATGCATTGCGTCATGGATGCTATTCCTGCCTCTGCTATTGAACCAGGAGGGGTGGCTCCAATACAGACCGAATTCTCCTCAAGCCGTATAGACTTTCTTCCATCGATGAGATTTTCCTGGTCGAAATCGAATGAACCAAATCACACCGACGATCAATCATCGGGATCTTCATCCAATCAGAAAGATGGACTTCTGGTGCTCAGAAACAAGGCTCCGCGGTGGCACGAACAGCTCCAATGTTGGTGTTTGAACTTTCACGGACGAGTGACAATTGCTTCAGTGAAAAACTTTCAGTTAGTAGCTTCACCTGAAAATGGACCTGCCGGACCTGAACATGAGAAGATCATCCTTCAATTTGGAAAAGTAGGAAAGGATATATTTACAATGGACTACAGGTATCCAATCTCAGCGTTTCAGGCCTTCGCCATCTGCCTCAGCAGCTTTGACACAAAGATCGCTTGTGAATGACACATCTCCGAGCAGGACCAAGTTAGTGAAGGCAGTGGGATTTTCTCTCAACAACAAGAACTATTGAACGGGTTCCAGCAATTAGCGTGTATCATAAAAGACCCTTAAATCGAAAATGGGGGCTTAAATGGAAGCCAGACTTTGAATTTCAGAGCTCATTCTCCAATTTTTGTGAATGGGCCGATGGCTGAGGGATCGCCAATTGTGATGCAGATTTTGAGGTACGCTATTTTTTTGTTCTATGGTTTCAGATAATTAAACGTTACAGATGGAGGAAATATGTGGACCCCAAAGATCATTACCAAAATTATGAAATTAATTGGTTAAATTATATGTTTTGTGTTCATTTATTTCATCTTTGAATTTTAATATTCAAATATTTTTAAAATTGTTCTAAATGTATATTTTAATGAATAGTAAAGACTCGTGACTAGTTATAGAGGTCCTTTGGTAGAGGAAATAGTGTTATTCTTTGGTTTTATGATCGTTTATTTGGTTGGATTCGGAGATTTTAGTGTTAATGTTTATTTTTTACCATTATTATTAGTGTTAATGTTTATTTTTTACCATTATTATTTTGAGAGAGTATATATCTTAATTAAATTAAGGTTAAGATCGGAGTATATATCATTAAGGTTACAGATCGGAGTATATAGAGCATAACTCCACTCCACATTGTTGTACTTTTAACCGATTTAAAGCATAACTCCCAACTTCAACGTATCGACTATGAGGATGTATAGGAGCTATTAGAAACAGAGATTTCATTGAATTTGGAAATCCTCCAGATCCCATGAAGCAAATGAATTCAAAGGATCATTGAAGGGTTTCCAAAGACAAATTTTATTGATATTTTCAATAAGCTAATATAGTTTAGTAGGACTTTGAAATATACAAACCAGCGAAGCATCTGATCTTACAAGAATATAGAAAACTGAAAATTTTAAAAATGAGAAATGATATACTCTACCATTCCGAAGAATTCAATCGAATTTCCCAGGCTTGACCTTACAGATGCTGGATTAAGATCTCTTCGAGGAGCTATCTGAAGCTCATCCGAGATCGTCGATAACGTTTTCGTGTATTAGATACGAGCAGAATTTTTATCCTTATTCAAGTCCTTGGATGATGATCTTGATGAATGACCTGCGGTGTGTTTTCTCCTTCTTGGAGGAGCACCAACGGCACCTGGGTCCATCAAGGGACCAGACCATGTTTGGATGCTTGCTTTTGGATACGAGAAATTCATGGTGCTAAATGGAACGTCGGGAGGATCATAGATCGGATCGACGTGATGCGAAGATCCCAGTTGGTAGCCAATCGCTCCGTCTTGATGTGGAGGAGGAAACTTTTCACTCTTGCTCTTCGCATTTGCGTGTGTTATGAGACGTCGTCTCTGTAGAGAGCATCGATGAAAATCAAATCACCAATCATATGAATTGAGCGTAAAATAGAAAGAAATCGAGTAAGGCGTACATACATCGAGATTGGCTTGAAGCTCAGCATTGGCTTCTGGAGCAGGAATTGCCCGAACAGCTCGATCACGTGCCCGTGTTCTCTTCACTCCATCTGCATTGCTTCTGCCAACAGCTCTTAGCCTGCACTCACACAGCTCAATCAAAGTCAGAAAAAATGTAAATTCATTTTATCCACTGTTTATCCTAATAACGAACAAGACGTTGGGTCTTAATCGGTCATCGACCTTCTAGCTTCTTCGTCCCGTAGTTTTGCATCCATTTCCTTGCTTGGAGGATACTTAGGAAGACTGGAAGGCTCACAAGCATATGGCTTTGTAGTGAAAAACTGCAAAAACAGAACAAAGTTCACAAAAATGTCTATGAACAAGAGAAATAAAGCAAGAACTACAAAAAAAAAAAAAAAAAAAAAANCTGCTATAATCAGCTTCCGAGGTTACTAAAACGACACGTGCTTTCTCTTCTCCTTCTCGGGGGGAGTAAATATGTGTCGATGAATGATAGGGTAAAAAACAATACTCCGTGGCATGCGCCGTAGATCTAATGGGTGAAAACTACTAGCCATGGAGCAAGATGATTCCTATGATGAAGAGAGACCTACTTAACGTATTTTCCGAACTGTTCTAAGTTTCTAAGAATCGATCATATCGTTATTTAATACCTACGATGCAGAGATTCAGTAGACAGCTCATCGGATAGTTTAAAAAACGATACGATGTGTATGCAACAGCATAATGTATAAACTCACTTCACTATGTAAAGCAGCCGTGGCAGTTAGGCGTTCAGCGGGGTCGATGGCGAGAAGCGTCTCGATTAGTGGCAGAGATGACGGCGGGAAGTCTTTAAACGTCTCTGCTATGCATCTCTTGTATGAATGTTGAGGCTTGAATATGGTTGCATGAGGCAATCTCGACTTTTTCCAGTATTCTTCTGTAGGAGAGCCAC

Coding sequence (CDS)

ATGTCTTTGAAGAGCATAATTCAGGAAATGAGATCCAGGTCCCGCCGTGTGGTGCAGGATGGATCGACGGCCGAAGTCGGTGATGGTTTGGCGCAGAGCTGTTGGGTTCACATGCCTCAGGAGTTGCTGAGAGAGGTTTTGATTAGAATCGAGAGCTCTGAGAATGCTTGGCCTCCGCGGAAGAGCGTCGTGGCTTGCGCTGGAGTTTGCCGGAGCTGGAGACGGATTACTAAGGAGATTGTTAAAACTCCCGAGGTTTCTGGCACATTGACGTTTCCTATCTCCGTCAAGCAGCCTGGTCCAAGGGATTTGCTTCTTCATTGTTTCATAAAACGGAATCGATCCGCACAAACTTATTGCCTTTATCTTAGTTTGACGAGTGCACTTGCTGACGATGGAAAGTTTCTTCTTGCTGCCCGGAAGTGTCGACGGGCCACCTGCACTGATTATATAATATCACTGCATGCTGATGACATGTCCAAGGCAAGTGGCACCTTTATTGGAAAATTAAGATCTAACTTTTTAGGAACCAAGTTCACAATCGTTGATGGACAGCCACCTCATGCGGGAGCCAAGATCTCAAGAAGTCGCTCCTCTAGGCTTGTAGGCCTGAAACAAGTGTCACCTAGAGTTCCTGCCGGCAACTACCCTGTGGCTCACATCTCATATGAGTTAAATGTCTTGGGTTCAAGGTACATATGA

Protein sequence

MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSRYI

Homology

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BLAST of Cp4.1LG08g04560 vs. ExPASy Swiss-Prot
Match: Q10LG8 (Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP6 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.5e-87
Identity = 165/248 (66.53%), Postives = 189/248 (76.21%), Query Frame = 0


Query: 1   MSLKSIIQEMR----SRSRRVVQDGS---------TAEVGD----GLAQSCWVHMPQELL 60
           MS +S+IQEMR    S SR  ++  S          A VG      + QSCW  +P ELL
Sbjct: 1   MSFRSLIQEMRDEFGSISRHSLRSRSHRGGGGAPRVAAVGPAEAAAMQQSCWAQLPPELL 60

Query: 61  REVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRD 120
           REVL+RIE SE  WP R+ VVACAGVCRSWR ITKEIV+ PE SG LTFPIS+KQPGPRD
Sbjct: 61  REVLVRIEESEVWWPSRRDVVACAGVCRSWRGITKEIVRVPEASGKLTFPISLKQPGPRD 120

Query: 121 LLLHCFIKRNRSAQTYCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKAS 180
             L CFI+RNR+ QTY LY+ LT ALADDGKFLLAARKCR+ TCTDY+ISL   DMSK S
Sbjct: 121 GTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMSDMSKGS 180

Query: 181 GTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISY 232
            T+IGKLRSNFLGTKFT+ D  PP+ GA +S+SRS+R+VGL QVSPRVPAGNYPV+HISY
Sbjct: 181 NTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVVGLNQVSPRVPAGNYPVSHISY 240

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy Swiss-Prot
Match: Q8VY21 (Tubby-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=TULP3 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-84
Identity = 159/251 (63.35%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MSLKSIIQEM-------------------RSRSRRVVQDGSTAEVGDGLAQSCWVHMPQE 60
           MS KS+IQ+M                   RSRS+RVVQD  T+   D   QSCW  MP E
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQD--TSVPVDAFKQSCWASMPPE 60

Query: 61  LLREVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGP 120
           LLR+VL+RIE SE+ WP RK+VV+CAGVCR+WR I KEIV+ PE+S  LTFPIS+KQPGP
Sbjct: 61  LLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 120

Query: 121 RDLLLHCFIKRNRSAQTYCLYLSLTSALA-DDGKFLLAARKCRRATCTDYIISLHADDMS 180
           R  L+ C+I RNRS QTY LYL L  A + DDGKFLLAA++ RR TCTDYIISL+ DD+S
Sbjct: 121 RGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVS 180

Query: 181 KASGTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAH 232
           + S T+IGKLRSNFLGTKFT+ D QP + G +++R+RSSRL+ LKQVSPR+P+GNYPVAH
Sbjct: 181 RGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAH 240

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy Swiss-Prot
Match: Q8H485 (Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP11 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.6e-81
Identity = 150/251 (59.76%), Postives = 183/251 (72.91%), Query Frame = 0


Query: 1   MSLKSIIQEM------------RSRSRRVVQDGSTAEVGDG--------LAQSCWVHMPQ 60
           MS +S+IQE+            RSR  RV +  + AE            + +SCW  +P 
Sbjct: 1   MSFRSVIQEVKGEIGAISRRGFRSRPGRVRRVAAAAEEPPDESSAAALVMRESCWTQLPP 60

Query: 61  ELLREVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPG 120
           ELLREVL R+E SE  WP R+ VVACAGVCRSWR I +EIV+TPE SG LTFPIS+KQPG
Sbjct: 61  ELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPG 120

Query: 121 PRDLLLHCFIKRNRSAQTYCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMS 180
           PRD  + CFI RNR+ QTY LY+ LT AL DDGKFLLAARKCRR TCT+Y+ISL  +D+S
Sbjct: 121 PRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDIS 180

Query: 181 KASGTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAH 232
           K + +++GKLRSNFLGTKFTI D  PP+AG  IS+ +S+R++G   +SPR+PAGNYPV+H
Sbjct: 181 KRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPVSH 240

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy Swiss-Prot
Match: Q9SQU1 (Tubby-like F-box protein 9 OS=Arabidopsis thaliana OX=3702 GN=TULP9 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.3e-75
Identity = 144/233 (61.80%), Postives = 179/233 (76.82%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQ-DGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENA-WP 60
           M+ +S++QEMRSR  RVV    STA   D  +   W  +P+ELLRE+LIR+E+ +   WP
Sbjct: 1   MTFRSLLQEMRSRPHRVVHAAASTANSSDPFS---WSELPEELLREILIRVETVDGGDWP 60

Query: 61  PRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQT 120
            R++VVACAGVCRSWR +TKEIV  PE S  LTFPIS+KQ GPRD L+ CFIKRNR+ Q+
Sbjct: 61  SRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQS 120

Query: 121 YCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTK 180
           Y LYL LT++L D+GKFLLAA K +RATCTDYIISL +DD+SK S  ++G++RSNFLGTK
Sbjct: 121 YHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTK 180

Query: 181 FTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 232
           FT+ DG    A AK+ +SRSS  +   +VSPRVP G+YP+AHISYELNVLGSR
Sbjct: 181 FTVFDGSQTGA-AKMQKSRSSNFI---KVSPRVPQGSYPIAHISYELNVLGSR 226

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy Swiss-Prot
Match: Q6NPQ1 (Tubby-like F-box protein 11 OS=Arabidopsis thaliana OX=3702 GN=TULP11 PE=2 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.9e-72
Identity = 140/238 (58.82%), Postives = 173/238 (72.69%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSC----WVHMPQELLREVLIRIESSE-N 60
           M+L+S+I EMRSR  RVV D + A   D  + S     W  +P+ELLRE+LIR+E+++  
Sbjct: 1   MTLRSLILEMRSRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGG 60

Query: 61  AWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRS 120
            WP R+SVVACAGVCR WR +  E V  PE+S  LTFPIS+KQPGPRD L+ CFIKRNR 
Sbjct: 61  GWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRI 120

Query: 121 AQTYCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFL 180
            Q+Y LYL LT++L DDGKFLLAA K +  TCTDYIISL +DDMS+ S  ++GK+RSNFL
Sbjct: 121 TQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFL 180

Query: 181 GTKFTIVDGQ--PPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 232
           GTKFT+ DG   P    AK+ +SRS       +VS +VP G+YPVAHI+YELNVLGSR
Sbjct: 181 GTKFTVFDGNLLPSTGAAKLRKSRS---YNPAKVSAKVPLGSYPVAHITYELNVLGSR 235

[Close]

BLAST of Cp4.1LG08g04560 vs. NCBI nr
Match: XP_023538780.1 (tubby-like F-box protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 464 bits (1194), Expect = 2.22e-162
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR
Sbjct: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. NCBI nr
Match: XP_022973707.1 (tubby-like F-box protein 3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 462 bits (1189), Expect = 1.28e-161
Identity = 230/231 (99.57%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGSTAEVG+GLAQSCWVHMPQELLREVLIRIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGNGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR
Sbjct: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. NCBI nr
Match: XP_022939531.1 (tubby-like F-box protein 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 462 bits (1188), Expect = 1.82e-161
Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVP GNYPVAHISYELNVLGSR
Sbjct: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPDGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. NCBI nr
Match: KAG7028951.1 (Tubby-like F-box protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 448 bits (1153), Expect = 3.34e-156
Identity = 225/231 (97.40%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSEN WPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENDWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYL+L    ADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT
Sbjct: 121 LYLTL----ADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR
Sbjct: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 227

[Close]

BLAST of Cp4.1LG08g04560 vs. NCBI nr
Match: XP_038884369.1 (tubby-like F-box protein 3 [Benincasa hispida])

HSP 1 Score: 445 bits (1145), Expect = 5.70e-155
Identity = 219/231 (94.81%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGST E+GD LAQSCW +MPQELLREVL+RIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTPELGDALAQSCWAYMPQELLREVLVRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           K+VVACAGVCRSWRRITKEIVKTPEVS  LTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KTVVACAGVCRSWRRITKEIVKTPEVSARLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTF+GKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFVGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           I DGQPPHAGAKIS+SRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR
Sbjct: 181 IFDGQPPHAGAKISKSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy TrEMBL
Match: A0A6J1I897 (tubby-like F-box protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472289 PE=3 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 6.20e-162
Identity = 230/231 (99.57%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGSTAEVG+GLAQSCWVHMPQELLREVLIRIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGNGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR
Sbjct: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy TrEMBL
Match: A0A6J1FG62 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111445408 PE=3 SV=1)

HSP 1 Score: 462 bits (1188), Expect = 8.80e-162
Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVP GNYPVAHISYELNVLGSR
Sbjct: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPDGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy TrEMBL
Match: A0A1S3AWX4 (Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103483793 PE=3 SV=1)

HSP 1 Score: 445 bits (1145), Expect = 2.76e-155
Identity = 219/231 (94.81%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGST EVGD LAQSCW +MPQELLREVL+RIESSENAWPPR
Sbjct: 1   MSLKSIIQEMRSRSRRVVQDGSTPEVGDALAQSCWAYMPQELLREVLVRIESSENAWPPR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           K+VVACAGVCRSWRRITKEIVKTPEVS  LTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 61  KTVVACAGVCRSWRRITKEIVKTPEVSARLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTF+GKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFVGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           I DGQPPHAGAKIS+SRSSRLVGLKQVSP+VPAGNYPVAHISYELNVLGSR
Sbjct: 181 IFDGQPPHAGAKISKSRSSRLVGLKQVSPKVPAGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy TrEMBL
Match: A0A0A0LAI3 (Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_3G151430 PE=3 SV=1)

HSP 1 Score: 445 bits (1145), Expect = 3.04e-154
Identity = 219/231 (94.81%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSLKSIIQEMRSRSRRVVQDGST EVGD LAQSCW +MPQELLREVL+RIESSENAWPPR
Sbjct: 71  MSLKSIIQEMRSRSRRVVQDGSTPEVGDALAQSCWAYMPQELLREVLVRIESSENAWPPR 130

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           K+VVACAGVCRSWRRITKEIVKTPEVS  LTFPISVKQPGPRDLLLHCFIKRNRSAQTYC
Sbjct: 131 KTVVACAGVCRSWRRITKEIVKTPEVSARLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 190

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTF+GKLRSNFLGTKFT
Sbjct: 191 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFVGKLRSNFLGTKFT 250

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           I DGQPPHAGAKIS+SRSSRLVGLKQVSP+VPAGNYPVAHISYELNVLGSR
Sbjct: 251 IFDGQPPHAGAKISKSRSSRLVGLKQVSPKVPAGNYPVAHISYELNVLGSR 301

[Close]

BLAST of Cp4.1LG08g04560 vs. ExPASy TrEMBL
Match: A0A6J1GTT1 (Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111457429 PE=3 SV=1)

HSP 1 Score: 441 bits (1135), Expect = 9.17e-154
Identity = 217/231 (93.94%), Postives = 225/231 (97.40%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENAWPPR 60
           MSL+SIIQEMRSRSRRVVQDGSTAEVGDGLAQSCW +MPQELLRE+L+RIESSEN WP R
Sbjct: 1   MSLRSIIQEMRSRSRRVVQDGSTAEVGDGLAQSCWTYMPQELLREILVRIESSENVWPLR 60

Query: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQTYC 120
           KSVVACAGVCRSWRRITKEIVKTPEVSG+LTFPISVKQPGPRDLLLHCFIKRNRSAQTY 
Sbjct: 61  KSVVACAGVCRSWRRITKEIVKTPEVSGSLTFPISVKQPGPRDLLLHCFIKRNRSAQTYF 120

Query: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTKFT 180
           LYLSLTSALADDGKFLLAARKCRRATCTDYIISLH DDMSKASGTF+GKLRSNFLGTKFT
Sbjct: 121 LYLSLTSALADDGKFLLAARKCRRATCTDYIISLHVDDMSKASGTFVGKLRSNFLGTKFT 180

Query: 181 IVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231
           I DGQPPHAGAK+S+SRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR
Sbjct: 181 IFDGQPPHAGAKLSKSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 231

[Close]

BLAST of Cp4.1LG08g04560 vs. TAIR 10
Match: AT2G47900.3 (tubby like protein 3 )

HSP 1 Score: 315.1 bits (806), Expect = 4.8e-86
Identity = 160/252 (63.49%), Postives = 190/252 (75.40%), Query Frame = 0


Query: 1   MSLKSIIQEM-------------------RSRSRRVVQDGSTAEVGDGLAQSCWVHMPQE 60
           MS KS+IQ+M                   RSRS+RVVQD  T+   D   QSCW  MP E
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQD--TSVPVDAFKQSCWASMPPE 60

Query: 61  LLREVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGP 120
           LLR+VL+RIE SE+ WP RK+VV+CAGVCR+WR I KEIV+ PE+S  LTFPIS+KQPGP
Sbjct: 61  LLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 120

Query: 121 RDLLLHCFIKRNRSAQTYCLYLSLTSALA--DDGKFLLAARKCRRATCTDYIISLHADDM 180
           R  L+ C+I RNRS QTY LYL L  A A  DDGKFLLAA++ RR TCTDYIISL+ DD+
Sbjct: 121 RGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDV 180

Query: 181 SKASGTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVA 232
           S+ S T+IGKLRSNFLGTKFT+ D QP + G +++R+RSSRL+ LKQVSPR+P+GNYPVA
Sbjct: 181 SRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVA 240

[Close]

BLAST of Cp4.1LG08g04560 vs. TAIR 10
Match: AT2G47900.1 (tubby like protein 3 )

HSP 1 Score: 314.3 bits (804), Expect = 8.2e-86
Identity = 159/251 (63.35%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MSLKSIIQEM-------------------RSRSRRVVQDGSTAEVGDGLAQSCWVHMPQE 60
           MS KS+IQ+M                   RSRS+RVVQD  T+   D   QSCW  MP E
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQD--TSVPVDAFKQSCWASMPPE 60

Query: 61  LLREVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGP 120
           LLR+VL+RIE SE+ WP RK+VV+CAGVCR+WR I KEIV+ PE+S  LTFPIS+KQPGP
Sbjct: 61  LLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 120

Query: 121 RDLLLHCFIKRNRSAQTYCLYLSLTSALA-DDGKFLLAARKCRRATCTDYIISLHADDMS 180
           R  L+ C+I RNRS QTY LYL L  A + DDGKFLLAA++ RR TCTDYIISL+ DD+S
Sbjct: 121 RGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVS 180

Query: 181 KASGTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAH 232
           + S T+IGKLRSNFLGTKFT+ D QP + G +++R+RSSRL+ LKQVSPR+P+GNYPVAH
Sbjct: 181 RGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAH 240

[Close]

BLAST of Cp4.1LG08g04560 vs. TAIR 10
Match: AT2G47900.2 (tubby like protein 3 )

HSP 1 Score: 314.3 bits (804), Expect = 8.2e-86
Identity = 159/251 (63.35%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MSLKSIIQEM-------------------RSRSRRVVQDGSTAEVGDGLAQSCWVHMPQE 60
           MS KS+IQ+M                   RSRS+RVVQD  T+   D   QSCW  MP E
Sbjct: 1   MSFKSLIQDMRGELGSISRKGFDVRFGYGRSRSQRVVQD--TSVPVDAFKQSCWASMPPE 60

Query: 61  LLREVLIRIESSENAWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGP 120
           LLR+VL+RIE SE+ WP RK+VV+CAGVCR+WR I KEIV+ PE+S  LTFPIS+KQPGP
Sbjct: 61  LLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISLKQPGP 120

Query: 121 RDLLLHCFIKRNRSAQTYCLYLSLTSALA-DDGKFLLAARKCRRATCTDYIISLHADDMS 180
           R  L+ C+I RNRS QTY LYL L  A + DDGKFLLAA++ RR TCTDYIISL+ DD+S
Sbjct: 121 RGSLVQCYIMRNRSNQTYYLYLGLNQAASNDDGKFLLAAKRFRRPTCTDYIISLNCDDVS 180

Query: 181 KASGTFIGKLRSNFLGTKFTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAH 232
           + S T+IGKLRSNFLGTKFT+ D QP + G +++R+RSSRL+ LKQVSPR+P+GNYPVAH
Sbjct: 181 RGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRTRSSRLLSLKQVSPRIPSGNYPVAH 240

[Close]

BLAST of Cp4.1LG08g04560 vs. TAIR 10
Match: AT3G06380.1 (tubby-like protein 9 )

HSP 1 Score: 282.0 bits (720), Expect = 4.5e-76
Identity = 144/233 (61.80%), Postives = 179/233 (76.82%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQ-DGSTAEVGDGLAQSCWVHMPQELLREVLIRIESSENA-WP 60
           M+ +S++QEMRSR  RVV    STA   D  +   W  +P+ELLRE+LIR+E+ +   WP
Sbjct: 1   MTFRSLLQEMRSRPHRVVHAAASTANSSDPFS---WSELPEELLREILIRVETVDGGDWP 60

Query: 61  PRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRSAQT 120
            R++VVACAGVCRSWR +TKEIV  PE S  LTFPIS+KQ GPRD L+ CFIKRNR+ Q+
Sbjct: 61  SRRNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQS 120

Query: 121 YCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFLGTK 180
           Y LYL LT++L D+GKFLLAA K +RATCTDYIISL +DD+SK S  ++G++RSNFLGTK
Sbjct: 121 YHLYLGLTTSLTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTK 180

Query: 181 FTIVDGQPPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 232
           FT+ DG    A AK+ +SRSS  +   +VSPRVP G+YP+AHISYELNVLGSR
Sbjct: 181 FTVFDGSQTGA-AKMQKSRSSNFI---KVSPRVPQGSYPIAHISYELNVLGSR 226

[Close]

BLAST of Cp4.1LG08g04560 vs. TAIR 10
Match: AT5G18680.1 (tubby like protein 11 )

HSP 1 Score: 273.1 bits (697), Expect = 2.1e-73
Identity = 140/238 (58.82%), Postives = 173/238 (72.69%), Query Frame = 0


Query: 1   MSLKSIIQEMRSRSRRVVQDGSTAEVGDGLAQSC----WVHMPQELLREVLIRIESSE-N 60
           M+L+S+I EMRSR  RVV D + A   D  + S     W  +P+ELLRE+LIR+E+++  
Sbjct: 1   MTLRSLILEMRSRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGG 60

Query: 61  AWPPRKSVVACAGVCRSWRRITKEIVKTPEVSGTLTFPISVKQPGPRDLLLHCFIKRNRS 120
            WP R+SVVACAGVCR WR +  E V  PE+S  LTFPIS+KQPGPRD L+ CFIKRNR 
Sbjct: 61  GWPSRRSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRI 120

Query: 121 AQTYCLYLSLTSALADDGKFLLAARKCRRATCTDYIISLHADDMSKASGTFIGKLRSNFL 180
            Q+Y LYL LT++L DDGKFLLAA K +  TCTDYIISL +DDMS+ S  ++GK+RSNFL
Sbjct: 121 TQSYHLYLGLTNSLTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFL 180

Query: 181 GTKFTIVDGQ--PPHAGAKISRSRSSRLVGLKQVSPRVPAGNYPVAHISYELNVLGSR 232
           GTKFT+ DG   P    AK+ +SRS       +VS +VP G+YPVAHI+YELNVLGSR
Sbjct: 181 GTKFTVFDGNLLPSTGAAKLRKSRS---YNPAKVSAKVPLGSYPVAHITYELNVLGSR 235

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g04560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10LG8	1.5e-87	66.53	Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP6 PE=...	[more]
Q8VY21	1.1e-84	63.35	Tubby-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=TULP3 PE=1 SV=1	[more]
Q8H485	2.6e-81	59.76	Tubby-like F-box protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP11 P...	[more]
Q9SQU1	6.3e-75	61.80	Tubby-like F-box protein 9 OS=Arabidopsis thaliana OX=3702 GN=TULP9 PE=1 SV=1	[more]
Q6NPQ1	2.9e-72	58.82	Tubby-like F-box protein 11 OS=Arabidopsis thaliana OX=3702 GN=TULP11 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g04560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538780.1	2.22e-162	100.00	tubby-like F-box protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022973707.1	1.28e-161	99.57	tubby-like F-box protein 3 isoform X1 [Cucurbita maxima]	[more]
XP_022939531.1	1.82e-161	99.57	tubby-like F-box protein 3 isoform X1 [Cucurbita moschata]	[more]
KAG7028951.1	3.34e-156	97.40	Tubby-like F-box protein 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038884369.1	5.70e-155	94.81	tubby-like F-box protein 3 [Benincasa hispida]	[more]

BLAST of Cp4.1LG08g04560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I897	6.20e-162	99.57	tubby-like F-box protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147228...	[more]
A0A6J1FG62	8.80e-162	99.57	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111445408 PE=3 SV=1	[more]
A0A1S3AWX4	2.76e-155	94.81	Tubby-like F-box protein OS=Cucumis melo OX=3656 GN=LOC103483793 PE=3 SV=1	[more]
A0A0A0LAI3	3.04e-154	94.81	Tubby-like F-box protein OS=Cucumis sativus OX=3659 GN=Csa_3G151430 PE=3 SV=1	[more]
A0A6J1GTT1	9.17e-154	93.94	Tubby-like F-box protein OS=Cucurbita moschata OX=3662 GN=LOC111457429 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g04560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47900.3	4.8e-86	63.49	tubby like protein 3	[more]
AT2G47900.1	8.2e-86	63.35	tubby like protein 3	[more]
AT2G47900.2	8.2e-86	63.35	tubby like protein 3	[more]
AT3G06380.1	4.5e-76	61.80	tubby-like protein 9	[more]
AT5G18680.1	2.1e-73	58.82	tubby like protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000007	Tubby, C-terminal	PRINTS	PR01573	SUPERTUBBY	coord: 215..233 score: 32.47 coord: 150..166 score: 37.7 coord: 166..190 score: 56.91
IPR000007	Tubby, C-terminal	PFAM	PF01167	Tub	coord: 98..231 e-value: 1.1E-44 score: 153.0
IPR025659	Tubby-like, C-terminal	GENE3D	3.20.90.10	Tubby Protein; Chain A	coord: 95..233 e-value: 1.8E-36 score: 127.9
IPR025659	Tubby-like, C-terminal	SUPERFAMILY	54518	Tubby C-terminal domain-like	coord: 84..231
None	No IPR available	GENE3D	1.20.1280.50		coord: 29..82 e-value: 2.1E-5 score: 26.3
None	No IPR available	PANTHER	PTHR16517:SF80	TUBBY-LIKE F-BOX PROTEIN 9	coord: 1..231
None	No IPR available	PANTHER	PTHR16517	TUBBY-RELATED	coord: 1..231
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 34..84 e-value: 5.7E-8 score: 32.4
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 29..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g04560.1	Cp4.1LG08g04560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005515	protein binding