Cp4.1LG08g03870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g03870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	meiotic recombination protein DMC1 homolog
Location	Cp4.1LG08: 1844423 .. 1849352 (-)
RNA-Seq Expression	Cp4.1LG08g03870
Synteny	Cp4.1LG08g03870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTCGCAACGCTCAAGTGAGTTAGAGATTTGTTCTCGTTATCTTTCGTTTTCAAATTGTAACAATTACTTTGTAATCTATCCATCGCATTCTCTCTCATTTTGTCTATGTGATGTTGCTCAGAGCGGAAGAACAGAGCCAGCAACTTCAGATTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCAATCGATAAACGTAAGTTTCAGAGCTTACAACTTATAATTAAGTTATGGTTTCGCTATTCAAAGAATTTCCTCGCTGACGCTTGTTTTGTGAAGTTCAAACAAAACTTGATTTCATGACGTTCTATCTTAGTGATTTGCTTGTTGACCTCGAGGTTGATTTGAAAAACTCCAATTCTAATTGATTTTCTTTCTCCGAAGAGATATGAGATTGCCGATACGGCATCACTGAATCTCATTCGATTGATTCATCAGAATTTTAATTTAGTGATCCTTTCAGTTCGCGATAGCCTTGCATCCAGTTTAGCTAGGTTTATTTTTTGTAGTGGTCTATTTTCCCAAGGCATGCAATTCTACCAGAGTTTTGCTAAAGTCGAGGAGAAGATACAACTAGTTTTAGCCATCAACTAACTATCATGCTGTACTGTTGTTCCACTACATCTGATAGAGTTCCCATGGCATTTTCTGTGCAGTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGGTAGAACAATTCTTACATCCGATCCTATATATTCTGAATTTGATGTAATTATAGTGACCAAGGGTTTTGTATCTTAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGGTCAGTGACTCAATCACCACTTCTGTTATCCACGATGCGTGCAATGGTTTACACAATGATGTCATAATGCGATGAAGTCCAGCTTTTCTTCAATTAACAGTTATTATGTCTGTCGTTTTTCAGAATTTTGGTTATATCACTGGAAGCGACGTTCTTCTCAGGGTAAGCTGCTTCTGTTTTTTATTTGTAACAAATTGAGTGTAACCAAATAGATCCATACTTCACCAAAAAAGTATAGTTCGCATAGTTTCCCTTTCCTTTCCCGCATGCTATAAGTTCTGCGTTCGGAAACAACTGTATACGATTTCCTTTAGTTTTTCTAGTAGCTCCTATAAGTTCAAGATATATTCTAGGAAAATACTGTCCGTCATGAAATGCAGACTGAGTCCTTGATTTTTGTTTGTAGAGAAAGTCTGTAGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCTGATTTACCACGTTCCTTTTTTCACTATCTCACCAATCATAAGCATTCAATATTGTTTTAATTCTTTCCAAAAGGTGGAATTGAAACTCTAGCGATCACGGAAGCTTTTGGAGAATTCAGGTGAGGATGTATATGTTAAAAGGCGCTTCAATTTTGTTTATTGAAAATCGAAGTCCCGTATTTAAATTGCCGTTCTCCTCTGACCTCGTTAAACGAATGCTAGGTCCGGGAAAACGCAACTCGCGCATACTCTATGCGTCTCTACGCAGGTAATCTACGCCTCATCTGAAGATTCATTGGGGTACAATGTAGTCTTGTTCCTTTTTCCGGTTCTCAGTCGATGAAATTTTAATAGTTACTAACAGAAATCGTTTTGACACCGTCCAAATATAACTTATGCCTTTCACTCTCCTGGCACCTGTTATAAAGCTTACTCTTACTAGTCTCCAGTGAAAGTCAAGTACACACAAGATAGTTATGGAATTACAATTGAGATTGTATTTCAGAAAACCTGGAAGCATATACTTGTTCGGCTTCGCATCTGATCTTTAAAATTGAGTTCGATTTATGTAATGCTATATTTGGTAATATATGTATTCAAAGAAAAGCTCAGGTTTACTTATCTTTCTTATAAATCTCGGAAGTACTTAGCGCCTCTTTAGCTGCATCAAATCTGATAACATCTTAACGATTGTGCTTGGCGTTTGCCTTGGCAGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAAGGCACTTTGTATCCTCTTCTGAAGCTTCTTTTATCATGTCGTTATTGCGGCATGTCTAGAGAATTGAAATGATTATCTTCAGAGATGTTCCCCTTTTCAATATGTCCTCCTTGACCACACGCACTTGCAGCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATGTAAGCACCATTCTTTTGCATATAGCTTCTTTCAACAAGATCACAAATCTTTTATTAATTTGCTGCTAATGGAAATAGATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCTGAAGAACCGTTTAAACTTCTGGTGAGTCACCTGGTAACTTGTAATTCAAATGTCAAAAACTATGTTGCCTGACATACATTCTATCTCTTAATTTCAGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGGTCGAATCCTATAGACTTCAACAGTCGTCTTAGAATTTAATTTCCCTATCTAAATCTCACCTGTCACCTTGTTTCATCAATTATGACACAAGCTGGTTGTCACGTGCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGGTAGCGATTGAACTTTATGGAAGTCGTTTCTAGTGCTTAGTCATCTCATTCAGGCAATCCATGACAGACATGTTAGCTCAATTTATGTTCAAAGAATTTTGACCTTGGTACTTCTTGTATTAGCTGGATTTACCGAGACTAAATCGTTTGCCGTTGAGTACACCGAACTGGTGTTTATCATTCAAAATGTTGGTCACTGAACGCGCCATCTGTCTTGTTGACAACAGTTGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCAAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTTGATGCTCCTAATTTGCCAGAGTCTGAAGCTATATCCTTACCTCACATCACGTCACACTTCAACACCTTCATTTATCATTTTCTGGTTAGTATAAACATAAATCCCATGACTCTCAACGATTTCCGAAATCATGGAACCAAAGATGTATGCAAGCAGTAAGTCCTACAATTCTTCTACTGCACTCATATCACTGCATAAAACTTGCACTTGATAAATATTGTAGATAAAGCAGAAGAGAAAAGGCTGGCTACACCTTTCACACAATTTTTTCCTTGACAGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGTCTCATGTGGTGCTGGAAAATTAAAGGAAACACAGGTTGAAATGTTTTAAACTTTTCATCTAGTTACTGGATACATATTTTTATCTTGAAGTGACAGTATGTAGGACCCTATGTACATTGTATCTTCTAGCATCCATAACGTCTTTAGCTACCCCATATGCAATCCATTTGGAAAAATAATGAAAAAGCGTTTTCTCTAGTAAACATTAAATTGCAACTCTATTCAGATACAGCCAAATATGCAATTTTGGCAAGGAGCAACTTTTTGGCATAAATCCGAAACCAGCGAAAATCTGTTTGGATAAATGCCCCCCTTCAGCCATTATGAACACATATAGAGCCAATTGTTAGAGAAGGGCAACCCCAAAAACATTTAGAAACAGACTATTATTCCACGTATCTAGAATGTAACTCAAATAAGCCACAGCAAGTTTCATATGATATTAAGTTGTAACTGCATAAACATGCCCATAACGGGAAGGGAAGTATAAACCCTAAGTACCCATTTACAAGGCACAGTTAAAGAGTAATGAAATATGGAAATATGGAAATATGGAAATATGGAAATATGGAAAGAGGCTGGAGGAAGGCCAAGGCCAAAGTAAACAAAGCCTTTGCCGAATAGTGCACTCAATAGTTTGATGACCAGTTTGCAGCACTCCCAACTCTTGGCATGCCAGAACTTTCCTTTCGAGCCTCTTCATCCACCTTGAAATTGGCTCCACAGACATGACCTGAACTGTCCACCCTTGGCACTGGCTTCAGCTCATTCAGTGGATGCTCAAAACTCCTCAACCCACCGGACGTTGTGAAGAAACAACCTAACATAGTGCAGAGAATCAATGAATAATAAACAAAAGAACCATCTGCGAATATGATATGATACCAGAAGAGATGCCCACAGTTCCCATAAAAAATTACCTTTGGGGAAAGAAGCAAATGACTTTCCACAACCCTTCTTCATAATTTCTACATCATCCGAGAGAACAAGCTGTCCCTCAGAATCAGTTCCCCAGTGGAGAGGAACACTCCCATCAGCATCCTACGAATTAAAAAGACACAAAATAGGCTAAAAACACAAGAAATCTGCAGCAATCAATGGTTAAACTAAGGGATCAGGGCAACAACTTACAGAAGCAAAAAATGCAGCTTTTGAGGAACTGTCAAATAGAACAAACACAAATTTCCCTTGAATATCTCTCACCACCTGATCAGCTGGATATGGACCCCGATCCCTTAACGTTCGATACGCTTCGATAACGATGATAACCTCATTCGCAGCTTTGTTCAATCCATATTGTTGCTTCAACTGAGCAACATTCTCAATGTGCCCTTGGAACAAGCAGAAAATGTCGTCCACAACCGCGAATAATCTAT

mRNA sequence

ATGATGCTCGCAACGCTCAAAGCGGAAGAACAGAGCCAGCAACTTCAGATTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCAATCGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGACGTTCTTCTCAGGAGAAAGTCTGTAGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCGGGAAAACGCAACTCGCGCATACTCTATGCGTCTCTACGCAGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAAGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCTGAAGAACCGTTTAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGTTGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCAAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTTGATGCTCCTAATTTGCCAGAGTCTGAAGCTATATCCTTACCTCACATCACGTCACACTTCAACACCTTCATTTATCATTTTCTGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGACGTCTCATGTGGTGCTGGAAAATTAAAGGAAACACAGGTTGAAATGTTTTAAACTTTTCATCTAGTTACTGGATACATATTTTTATCTTGAAGTGACAGTATGTAGGACCCTATGTACATTGTATCTTCTAGCATCCATAACGTCTTTAGCTACCCCATATGCAATCCATTTGGAAAAATAATGAAAAAGCGTTTTCTCTAGTAAACATTAAATTGCAACTCTATTCAGATACAGCCAAATATGCAATTTTGGCAAGGAGCAACTTTTTGGCATAAATCCGAAACCAGCGAAAATCTGTTTGGATAAATGCCCCCCTTCAGCCATTATGAACACATATAGAGCCAATTGTTAGAGAAGGGCAACCCCAAAAACATTTAGAAACAGACTATTATTCCACGTATCTAGAATGTAACTCAAATAAGCCACAGCAAGTTTCATATGATATTAAGTTGTAACTGCATAAACATGCCCATAACGGGAAGGGAAGTATAAACCCTAAGTACCCATTTACAAGGCACAGTTAAAGAGTAATGAAATATGGAAATATGGAAATATGGAAATATGGAAATATGGAAAGAGGCTGGAGGAAGGCCAAGGCCAAAGTAAACAAAGCCTTTGCCGAATAGTGCACTCAATAGTTTGATGACCAGTTTGCAGCACTCCCAACTCTTGGCATGCCAGAACTTTCCTTTCGAGCCTCTTCATCCACCTTGAAATTGGCTCCACAGACATGACCTGAACTGTCCACCCTTGGCACTGGCTTCAGCTCATTCAGTGGATGCTCAAAACTCCTCAACCCACCGGACGTTGTGAAGAAACAACCTAACATAGTGCAGAGAATCAATGAATAATAAACAAAAGAACCATCTGCGAATATGATATGATACCAGAAGAGATGCCCACAGTTCCCATAAAAAATTACCTTTGGGGAAAGAAGCAAATGACTTTCCACAACCCTTCTTCATAATTTCTACATCATCCGAGAGAACAAGCTGTCCCTCAGAATCAGTTCCCCAGTGGAGAGGAACACTCCCATCAGCATCCTACGAATTAAAAAGACACAAAATAGGCTAAAAACACAAGAAATCTGCAGCAATCAATGGTTAAACTAAGGGATCAGGGCAACAACTTACAGAAGCAAAAAATGCAGCTTTTGAGGAACTGTCAAATAGAACAAACACAAATTTCCCTTGAATATCTCTCACCACCTGATCAGCTGGATATGGACCCCGATCCCTTAACGTTCGATACGCTTCGATAACGATGATAACCTCATTCGCAGCTTTGTTCAATCCATATTGTTGCTTCAACTGAGCAACATTCTCAATGTGCCCTTGGAACAAGCAGAAAATGTCGTCCACAACCGCGAATAATCTAT

Coding sequence (CDS)

ATGATGCTCGCAACGCTCAAAGCGGAAGAACAGAGCCAGCAACTTCAGATTGTAGAGCGCGAAGATATTGAGGATGAAGACGACTTGTTCGAAGCAATCGATAAACTGACTTCTCATGGAATTAATGCTGGAGACGTGAAGAAGCTTCAGGATGCAGGGATATACACTTGCAATGGTTTGATGATGCACACGAAGAAGCACTTGACAGGGATAAAAGGTTTATCCGAAGCGAAGGTTGATAAGATCTGCGAAGCTGCCGAAAAGCTAGTGAATTTTGGTTATATCACTGGAAGCGACGTTCTTCTCAGGAGAAAGTCTGTAGTTCGCATTACGACTGGAAGCCAGGCTCTCGATGAACTCTTAGGAGGCAAGTCCGGGAAAACGCAACTCGCGCATACTCTATGCGTCTCTACGCAGCTTCCCACCAACATGCGGGGAGGGAATGGAAAGGTTGCATACATCGACACTGAAGGCACTTTCCGACCTGATCGAATTGTGCCTATAGCTGAAAGATTTGGCATGGACCCGGGAGCTGTGCTAGATAATATCATATATGCTCGTGCCTACACCTACGAACATCAGCATAACCTCTTGCTCGGCCTTGCGGCAAAAATGTCTGAAGAACCGTTTAAACTTCTGATTGTTGACTCTATCATTGCACTTTTTCGAGTGGATTTCACTGGAAGAGGAGAACTTGCAGAGCGCCAGCAAAAACTGGCGCAGATGCTGTCCCGATTAACTAAAATTGCAGAAGAGTATAATGTAGCAGTTTACATGACCAACCAAGTTGTTGCAGACCCAGGTGGAGGAGTGTTCGTATCAGACCCAAAAAAACCAGCAGGAGGCCACGTTCTTGCCCATGCTGCCACGGTAAGACTGATGTTCAGGAAAGGCAAAGGAGAACAACGCATCTGTAAGGTGTTTGATGCTCCTAATTTGCCAGAGTCTGAAGCTATATCCTTACCTCACATCACGTCACACTTCAACACCTTCATTTATCATTTTCTGAACCACGTTTTTCAGATAACACCAGGGGGCATTGCAGATGCAAAGGATTGA

Protein sequence

MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGGKSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGIADAKD

Homology

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BLAST of Cp4.1LG08g03870 vs. ExPASy Swiss-Prot
Match: Q96449 (Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 4.3e-168
Identity = 304/365 (83.29%), Postives = 324/365 (88.77%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLK+EE S QLQ+VEREDI+D++DLFEAIDKL + GINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKSEESSGQLQLVEREDIDDDEDLFEAIDKLIAQGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKK+LTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+RKSV+RITTGSQALDELL
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVIRITTGSQALDELL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGVETSAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF+LLIVDS+IALFRVDF+
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFS 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELA+RQQKLAQMLSRL KIAEE+NVAVYMTNQV++DPGGGVFV+DPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVISDPGGGVFVTDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 353
           AATVRLMFRKGKGEQRICKVFDAPNLPE+EA                    VFQIT GGI
Sbjct: 301 AATVRLMFRKGKGEQRICKVFDAPNLPEAEA--------------------VFQITAGGI 345

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy Swiss-Prot
Match: Q39009 (Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DMC1 PE=1 SV=2)

HSP 1 Score: 556.2 bits (1432), Expect = 2.6e-157
Identity = 282/365 (77.26%), Postives = 318/365 (87.12%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           M+A+LKAEE S Q+Q+VERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLM
Sbjct: 1   MMASLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSD L++RKSVV+ITTG QALD+LL
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCV+TQLPTNM+GGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELA+RQQKLAQMLSRL KIAEE+NVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 353
           AAT+RL+FRKGKG+ R+CKV+DAPNL E+EA                     FQIT GGI
Sbjct: 301 AATIRLLFRKGKGDTRVCKVYDAPNLAEAEA--------------------SFQITQGGI 344

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy Swiss-Prot
Match: P37384 (Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM15 PE=2 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 7.6e-157
Identity = 284/358 (79.33%), Postives = 309/358 (86.31%), Query Frame = 0


Query: 10  EQSQQLQIVEREDI-EDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHL 69
           E   QLQ+++R++  E+E+D FE+IDKL S GINAGDVKKLQDAGIYTCNGLMMHTKK+L
Sbjct: 12  ESPGQLQLLDRQEAEEEEEDCFESIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKNL 71

Query: 70  TGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG----- 129
           TGIKGLSEAKVDKICEAAEKLVN GYITGSDVLL+RKSV+RITTGSQALDELLGG     
Sbjct: 72  TGIKGLSEAKVDKICEAAEKLVNVGYITGSDVLLKRKSVIRITTGSQALDELLGGGIETL 131

Query: 130 ---------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGM 189
                    +SGKTQ+AHTLCVSTQLP +M GGNGKVAYIDTEGTFRPDRIVPIAERFGM
Sbjct: 132 QITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYIDTEGTFRPDRIVPIAERFGM 191

Query: 190 DPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAE 249
           D  AVLDNIIYARAYTYEHQ+NLLL LAAKMSEEPF+LLIVDS+IALFRVDF+GRGELAE
Sbjct: 192 DASAVLDNIIYARAYTYEHQYNLLLALAAKMSEEPFRLLIVDSVIALFRVDFSGRGELAE 251

Query: 250 RQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHAATVRLM 309
           RQQKLAQMLSRLTKIAEE+NVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAHAATVRLM
Sbjct: 252 RQQKLAQMLSRLTKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATVRLM 311

Query: 310 FRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGIADAKD 353
            RKGKGEQR+CK+FDAPNLPESEA                    VFQITPGG+ADAKD
Sbjct: 312 LRKGKGEQRVCKIFDAPNLPESEA--------------------VFQITPGGVADAKD 349

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy Swiss-Prot
Match: Q7EAG4 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 4.3e-152
Identity = 273/364 (75.00%), Postives = 309/364 (84.89%), Query Frame = 0


Query: 3   LATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 62
           +A  K  ++  QLQ+++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMM
Sbjct: 1   MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMM 60

Query: 63  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLG 122
           HTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD+L++RKSVVRITTGSQALDELLG
Sbjct: 61  HTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLG 120

Query: 123 G--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPI 182
           G              +SGKTQLAHTLCVSTQLP +M GGNGKVAYIDTEGTFRP+RIVPI
Sbjct: 121 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 180

Query: 183 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 242
           AERFGMD  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+G
Sbjct: 181 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSG 240

Query: 243 RGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 302
           RGELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHA
Sbjct: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHA 300

Query: 303 ATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGIA 353
           AT+RLM RKGKGEQR+CK+FDAPNLPE EA                    VFQ+T GGI 
Sbjct: 301 ATIRLMLRKGKGEQRVCKIFDAPNLPEGEA--------------------VFQVTSGGIM 344

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy Swiss-Prot
Match: Q7GBF7 (Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=DMC1B PE=2 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 4.3e-152
Identity = 273/364 (75.00%), Postives = 309/364 (84.89%), Query Frame = 0


Query: 3   LATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMM 62
           +A  K  ++  QLQ+++ E IE+E++ FE+IDKL S GIN+GDVKKLQDAGIYTCNGLMM
Sbjct: 1   MAPSKQYDEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDVKKLQDAGIYTCNGLMM 60

Query: 63  HTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLG 122
           HTKK LTGIKGLSEAKVDKICEAAEKL++ G++TGSD+L++RKSVVRITTGSQALDELLG
Sbjct: 61  HTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFMTGSDLLIKRKSVVRITTGSQALDELLG 120

Query: 123 G--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPI 182
           G              +SGKTQLAHTLCVSTQLP +M GGNGKVAYIDTEGTFRP+RIVPI
Sbjct: 121 GGIETLCITEAFGEFRSGKTQLAHTLCVSTQLPIHMHGGNGKVAYIDTEGTFRPERIVPI 180

Query: 183 AERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTG 242
           AERFGMD  AVLDNIIYARAYTYEHQ+NLLLGLAAKM+EEPF+LLIVDS+IALFRVDF+G
Sbjct: 181 AERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMAEEPFRLLIVDSVIALFRVDFSG 240

Query: 243 RGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAHA 302
           RGELAERQQKLAQMLSRLTKIAEE+NVAVY+TNQV+ADPGGG+F++DPKKPAGGHVLAHA
Sbjct: 241 RGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVIADPGGGMFITDPKKPAGGHVLAHA 300

Query: 303 ATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGIA 353
           AT+RLM RKGKGEQR+CK+FDAPNLPE EA                    VFQ+T GGI 
Sbjct: 301 ATIRLMLRKGKGEQRVCKIFDAPNLPEGEA--------------------VFQVTSGGIM 344

[Close]

BLAST of Cp4.1LG08g03870 vs. NCBI nr
Match: KAG6597413.1 (hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 647 bits (1668), Expect = 1.00e-232
Identity = 336/366 (91.80%), Postives = 341/366 (93.17%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 LGG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180
           LGG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

Query: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGG 352
           HAATVRLMFRKGKGEQRICKVFDAPNLPESEAIS  HITSHFNTFIYHFL  +  I P  
Sbjct: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISFTHITSHFNTFIYHFLVSI-NINPMN 360

[Close]

BLAST of Cp4.1LG08g03870 vs. NCBI nr
Match: XP_022974436.1 (meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 644 bits (1661), Expect = 1.17e-231
Identity = 336/366 (91.80%), Postives = 341/366 (93.17%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 LGG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180
           LGG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

Query: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGG 352
           HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISL HITSHF TFIYHFL  +  I P  
Sbjct: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFLVGI-NIEPMN 360

[Close]

BLAST of Cp4.1LG08g03870 vs. NCBI nr
Match: XP_022138203.1 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica charantia])

HSP 1 Score: 629 bits (1621), Expect = 6.91e-226
Identity = 329/365 (90.14%), Postives = 334/365 (91.51%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+RKSVVRITTGSQALDELL
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 352
           AATVRLMFRKGKGEQRICKVFDAPNLPESEAISL                HVFQITPGGI
Sbjct: 301 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISL-----------LSXRKHVFQITPGGI 354

[Close]

BLAST of Cp4.1LG08g03870 vs. NCBI nr
Match: XP_022947681.1 (meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 meiotic recombination protein DMC1 homolog isoform X2 [Cucurbita maxima] >XP_023540848.1 meiotic recombination protein DMC1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 628 bits (1619), Expect = 1.03e-225
Identity = 331/366 (90.44%), Postives = 332/366 (90.71%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 LGG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180
           LGG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

Query: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGG 352
           HAATVRLMFRKGKGEQRICKVFDAPNLPESEA                    VFQITPGG
Sbjct: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEA--------------------VFQITPGG 346

[Close]

BLAST of Cp4.1LG08g03870 vs. NCBI nr
Match: XP_004134116.1 (meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus] >XP_038878023.1 meiotic recombination protein DMC1 homolog [Benincasa hispida])

HSP 1 Score: 619 bits (1597), Expect = 2.24e-222
Identity = 325/365 (89.04%), Postives = 330/365 (90.41%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+RKSVVRITTGSQALDELL
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 352
           AATVRLMFRKGKGEQRICKVFDAPNLPESEA                    VFQITPGGI
Sbjct: 301 AATVRLMFRKGKGEQRICKVFDAPNLPESEA--------------------VFQITPGGI 345

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy TrEMBL
Match: A0A6J1IBC8 (meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 644 bits (1661), Expect = 5.65e-232
Identity = 336/366 (91.80%), Postives = 341/366 (93.17%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 LGG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180
           LGG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

Query: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGG 352
           HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISL HITSHF TFIYHFL  +  I P  
Sbjct: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLTHITSHFITFIYHFLVGI-NIEPMN 360

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy TrEMBL
Match: A0A6J1CCE5 (LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica charantia OX=3673 GN=LOC111009434 PE=3 SV=1)

HSP 1 Score: 629 bits (1621), Expect = 3.34e-226
Identity = 329/365 (90.14%), Postives = 334/365 (91.51%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSD LL+RKSVVRITTGSQALDELL
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTHMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 352
           AATVRLMFRKGKGEQRICKVFDAPNLPESEAISL                HVFQITPGGI
Sbjct: 301 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISL-----------LSXRKHVFQITPGGI 354

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy TrEMBL
Match: A0A6J1IA86 (meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473101 PE=3 SV=1)

HSP 1 Score: 628 bits (1619), Expect = 5.01e-226
Identity = 331/366 (90.44%), Postives = 332/366 (90.71%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 LGG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180
           LGG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

Query: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGG 352
           HAATVRLMFRKGKGEQRICKVFDAPNLPESEA                    VFQITPGG
Sbjct: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEA--------------------VFQITPGG 346

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy TrEMBL
Match: A0A6J1G745 (meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111451472 PE=3 SV=1)

HSP 1 Score: 628 bits (1619), Expect = 5.01e-226
Identity = 331/366 (90.44%), Postives = 332/366 (90.71%), Query Frame = 0


Query: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60
           MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL
Sbjct: 1   MMLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGL 60

Query: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120
           MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL
Sbjct: 61  MMHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDEL 120

Query: 121 LGG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180
           LGG              +SGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV
Sbjct: 121 LGGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 180

Query: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240
           PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF
Sbjct: 181 PIAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDF 240

Query: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300
           TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA
Sbjct: 241 TGRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLA 300

Query: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGG 352
           HAATVRLMFRKGKGEQRICKVFDAPNLPESEA                    VFQITPGG
Sbjct: 301 HAATVRLMFRKGKGEQRICKVFDAPNLPESEA--------------------VFQITPGG 346

[Close]

BLAST of Cp4.1LG08g03870 vs. ExPASy TrEMBL
Match: A0A1S3AXH2 (meiotic recombination protein DMC1 homolog OS=Cucumis melo OX=3656 GN=LOC103483670 PE=3 SV=1)

HSP 1 Score: 618 bits (1594), Expect = 3.11e-222
Identity = 324/365 (88.77%), Postives = 330/365 (90.41%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           MLATLKAEEQSQQLQ+VEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM
Sbjct: 1   MLATLKAEEQSQQLQLVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKKHLTGIKGLSEAKVDKICEAA+KLVNFGYITGSD LL+RKSVVRITTGSQALDELL
Sbjct: 61  MHTKKHLTGIKGLSEAKVDKICEAADKLVNFGYITGSDALLKRKSVVRITTGSQALDELL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCVSTQLPT+MRGGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETLAITEAFGEFRSGKTQLAHTLCVSTQLPTSMRGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELAERQQKLAQMLSRLTKIAEE+NVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH
Sbjct: 241 GRGELAERQQKLAQMLSRLTKIAEEFNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 352
           AATVRLMFRKGKGEQRICKVFDAPNLPESEA                    VFQITPGGI
Sbjct: 301 AATVRLMFRKGKGEQRICKVFDAPNLPESEA--------------------VFQITPGGI 345

[Close]

BLAST of Cp4.1LG08g03870 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 556.2 bits (1432), Expect = 1.9e-158
Identity = 282/365 (77.26%), Postives = 318/365 (87.12%), Query Frame = 0


Query: 2   MLATLKAEEQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLM 61
           M+A+LKAEE S Q+Q+VERE+ ++++DLFE IDKL + GINAGDVKKLQ+AGI+TCNGLM
Sbjct: 1   MMASLKAEETS-QMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLM 60

Query: 62  MHTKKHLTGIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELL 121
           MHTKK+LTGIKGLSEAKVDKICEAAEK+VNFGY+TGSD L++RKSVV+ITTG QALD+LL
Sbjct: 61  MHTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLL 120

Query: 122 GG--------------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP 181
           GG              +SGKTQLAHTLCV+TQLPTNM+GGNGKVAYIDTEGTFRPDRIVP
Sbjct: 121 GGGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVP 180

Query: 182 IAERFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFT 241
           IAERFGMDPGAVLDNIIYARAYTYEHQ+NLLLGLAAKMSEEPF++LIVDSIIALFRVDFT
Sbjct: 181 IAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFT 240

Query: 242 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 301
           GRGELA+RQQKLAQMLSRL KIAEE+NVAVYMTNQV+ADPGGG+F+SDPKKPAGGHVLAH
Sbjct: 241 GRGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAH 300

Query: 302 AATVRLMFRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGI 353
           AAT+RL+FRKGKG+ R+CKV+DAPNL E+EA                     FQIT GGI
Sbjct: 301 AATIRLLFRKGKGDTRVCKVYDAPNLAEAEA--------------------SFQITQGGI 344

[Close]

BLAST of Cp4.1LG08g03870 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-81
Identity = 165/358 (46.09%), Postives = 224/358 (62.57%), Query Frame = 0


Query: 10  EQSQQLQIVEREDIEDEDDLFEAIDKLTSHGINAGDVKKLQDAGIYTCNGLMMHTKKHLT 69
           EQ +    V+++D E+       +++L + GI + DVKKL+DAG+ T  G+    +K L 
Sbjct: 5   EQRRNQNAVQQQDDEETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKDLL 64

Query: 70  GIKGLSEAKVDKICEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG------ 129
            IKG+S+AKVDKI EAA KLV  G+ + S +  +R+ +++IT+GS+ LD++L G      
Sbjct: 65  QIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIETGS 124

Query: 130 --------KSGKTQLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 189
                   +SGKTQL HTLCV+ QLP +  GG GK  YID EGTFRP R++ IA+RFG++
Sbjct: 125 ITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLN 184

Query: 190 PGAVLDNIIYARAYTYEHQHNLLLGLAAKMSEEPFKLLIVDSIIALFRVDFTGRGELAER 249
              VL+N+ YARAY  +HQ  LLL  A+ M E  F LLIVDS  AL+R DF+GRGEL+ R
Sbjct: 185 GADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELSAR 244

Query: 250 QQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPK-KPAGGHVLAHAATVRLM 309
           Q  LA+ L  L K+A+E+ VAV +TNQVVA   G    + P+ KP GG+++AHA T RL 
Sbjct: 245 QMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLA 304

Query: 310 FRKGKGEQRICKVFDAPNLPESEAISLPHITSHFNTFIYHFLNHVFQITPGGIADAKD 353
            RKG+ E+RICKV  +P LPE+EA                     FQI+  G+ D KD
Sbjct: 305 LRKGRAEERICKVISSPCLPEAEA--------------------RFQISTEGVTDCKD 342

[Close]

BLAST of Cp4.1LG08g03870 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 85/271 (31.37%), Postives = 130/271 (47.97%), Query Frame = 0


Query: 83  CEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG--------------KSGKT 142
           C  +  L+N G     D+L   +S+ RITT    LD +LGG                GKT
Sbjct: 79  CNGSRSLIN-GAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 138

Query: 143 QLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE------------------ 202
           Q+   L V+ Q+P    G  GK  YIDTEG+F  +R + IAE                  
Sbjct: 139 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 198

Query: 203 --RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFT 262
             +  M P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+ 
Sbjct: 199 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY- 258

Query: 263 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 319
              +LA+R + L++M  +  K+A+++++AV + NQV      G F       A G   +H
Sbjct: 259 --DDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF---QLALALGDSWSH 318

[Close]

BLAST of Cp4.1LG08g03870 vs. TAIR 10
Match: AT2G45280.2 (RAS associated with diabetes protein 51C )

HSP 1 Score: 107.5 bits (267), Expect = 2.3e-23
Identity = 85/271 (31.37%), Postives = 130/271 (47.97%), Query Frame = 0


Query: 83  CEAAEKLVNFGYITGSDVLLRRKSVVRITTGSQALDELLGG--------------KSGKT 142
           C  +  L+N G     D+L   +S+ RITT    LD +LGG                GKT
Sbjct: 103 CNGSRSLIN-GAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKT 162

Query: 143 QLAHTLCVSTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE------------------ 202
           Q+   L V+ Q+P    G  GK  YIDTEG+F  +R + IAE                  
Sbjct: 163 QIGIQLSVNVQIPRECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQ 222

Query: 203 --RFGMDPGAVLDNIIYARAYTYEHQHNLLLGLAAKMSE-EPFKLLIVDSIIALFRVDFT 262
             +  M P  +L+NI Y R  +Y  Q  L+  L   +SE +  K++IVDSI   FR D+ 
Sbjct: 223 ANQVQMKPEDILENIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDY- 282

Query: 263 GRGELAERQQKLAQMLSRLTKIAEEYNVAVYMTNQVVADPGGGVFVSDPKKPAGGHVLAH 319
              +LA+R + L++M  +  K+A+++++AV + NQV      G F       A G   +H
Sbjct: 283 --DDLAQRTRVLSEMALKFMKLAKKFSLAVVLLNQVTTKFSEGSF---QLALALGDSWSH 342

[Close]

BLAST of Cp4.1LG08g03870 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-11
Identity = 52/198 (26.26%), Postives = 95/198 (47.98%), Query Frame = 0


Query: 93  GYITGSDVLLRRKSVVRITTGSQALDELL-GGKS-------------GKTQLAHTLCVST 152
           G I   ++L R  +  ++TTG + LD  L GG S             GKTQL   L + T
Sbjct: 4   GKIKPENLLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCT 63

Query: 153 QLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV--------LDNIIYARAYT 212
           QLP +  G NG   Y+ +E  F   R+  ++  F     ++         D++     ++
Sbjct: 64  QLPISHGGLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHS 123

Query: 213 YEHQHNLLLGLAAKMSEE----PFKLLIVDSIIALFRVDFTGR-GELAERQQKLAQMLSR 264
            +H  +++  +   +       P KL+++DS+ ALFR +F     +L +R     ++  +
Sbjct: 124 VDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGK 183

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g03870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96449	4.3e-168	83.29	Meiotic recombination protein DMC1 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q39009	2.6e-157	77.26	Meiotic recombination protein DMC1 homolog OS=Arabidopsis thaliana OX=3702 GN=DM...	[more]
P37384	7.6e-157	79.33	Meiotic recombination protein DMC1 homolog OS=Lilium longiflorum OX=4690 GN=LIM1...	[more]
Q7EAG4	4.3e-152	75.00	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. indica OX=39...	[more]
Q7GBF7	4.3e-152	75.00	Meiotic recombination protein DMC1 homolog B OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Cp4.1LG08g03870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6597413.1	1.00e-232	91.80	hypothetical protein SDJN03_10593, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022974436.1	1.17e-231	91.80	meiotic recombination protein DMC1 homolog isoform X1 [Cucurbita maxima]	[more]
XP_022138203.1	6.91e-226	90.14	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog [Momordica chara...	[more]
XP_022947681.1	1.03e-225	90.44	meiotic recombination protein DMC1 homolog [Cucurbita moschata] >XP_022974437.1 ...	[more]
XP_004134116.1	2.24e-222	89.04	meiotic recombination protein DMC1 homolog isoform X2 [Cucumis sativus] >XP_0388...	[more]

BLAST of Cp4.1LG08g03870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IBC8	5.65e-232	91.80	meiotic recombination protein DMC1 homolog isoform X1 OS=Cucurbita maxima OX=366...	[more]
A0A6J1CCE5	3.34e-226	90.14	LOW QUALITY PROTEIN: meiotic recombination protein DMC1 homolog OS=Momordica cha...	[more]
A0A6J1IA86	5.01e-226	90.44	meiotic recombination protein DMC1 homolog isoform X2 OS=Cucurbita maxima OX=366...	[more]
A0A6J1G745	5.01e-226	90.44	meiotic recombination protein DMC1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A1S3AXH2	3.11e-222	88.77	meiotic recombination protein DMC1 homolog OS=Cucumis melo OX=3656 GN=LOC1034836...	[more]

BLAST of Cp4.1LG08g03870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22880.1	1.9e-158	77.26	DNA repair (Rad51) family protein	[more]
AT5G20850.1	3.1e-81	46.09	RAS associated with diabetes protein 51	[more]
AT2G45280.1	2.3e-23	31.37	RAS associated with diabetes protein 51C	[more]
AT2G45280.2	2.3e-23	31.37	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	1.2e-11	26.26	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	GENE3D	1.10.150.20		coord: 10..92 e-value: 4.0E-30 score: 105.6
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 16..320
None	No IPR available	PANTHER	PTHR22942:SF64	MEIOTIC RECOMBINATION PROTEIN DMC1-LIKE PROTEIN	coord: 16..320
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 336..352 e-value: 480.0 score: -2.6 coord: 19..321 e-value: 1.4E-115 score: 383.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 93..352 e-value: 8.7E-77 score: 260.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 109..318
IPR011940	Meiotic recombination protein Dmc1	TIGRFAM	TIGR02238	TIGR02238	coord: 33..319 e-value: 1.2E-144 score: 479.2
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 93..319 e-value: 7.0E-95 score: 317.1
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 106..263 score: 30.788187
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 269..318 score: 15.767197
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 110..347 e-value: 2.35617E-116 score: 334.937
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 25..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g03870.1	Cp4.1LG08g03870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0000730	DNA recombinase assembly
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0042148	strand invasion
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006281	DNA repair
cellular_component	GO:0000794	condensed nuclear chromosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding