Cp4.1LG08g03220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g03220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pre-mRNA-processing factor 19
Location	Cp4.1LG08: 2206858 .. 2215002 (+)
RNA-Seq Expression	Cp4.1LG08g03220
Synteny	Cp4.1LG08g03220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGCTTTTGAAAATCCCTAGTATCATCTCGCGGTACCTCTTTTCCCCGATCTCTCTCTTTCACTCCCTTTCCTCTCGCGCTGCTGGTTGCCGACTGTCCAGCAGTGCCGTCCGCCGTCTGAGAAAATCCTACTGCACCGCCACTCCACTCATAAACCCTAGTTCTCCGCTAAAATGAACTGCTCTAGTAAGTTCTCCAATTTTTCATTCTCTTAAATTCATTGTTTTGCTTCTTCAATTTGTGCTGATCTCTGTTATTGTTATGTTTGATTTGCTCTACAGTCTCCGGCGAGATTCCGGAAGAGCCAGTTGTCTCTAAGAATTCTGGATTACTCTTCGAGAAGCGGTTAATCGAGAGGCACATTTCAGTATGCTTGTTTTTCTTTCCCTACCACTCAACTCGTTTCTCCTTTCCTTTTTAGGGTTTTTTGACTTTGTTTTTAGTTCACTCTGCGTAATGGGAGGCTGGTTTAGCTTGTCACTTTGGCTTTCTGTTTTTTATGCGTGATTTTCGCCTGTCTTTGGCTCGCGGAACTACAATTTCTGAATTTATGGGGTTTAAGGTCTGTTTGTTCTTTTGTAATTTGTTTTTTAAAGAATTAGGATACTTCATCCGAGGTCATTCATCGCAGCTGAGGATACTGAAACGTATGGAAGTTCAGTTTGATTTCCAAACCTGTAATATGTTAAAAACTAATACACGCCTTCAAAGATTTATTTTTTGAAATCTGGTCATGTTATAAACACATTTCAAATGACGGCAGTTTTCTCAGCTCAGAAAGAAAGCGTATTCCTTACTTTCCTAGTACCTTTTTTGCTATCTGTTTGCAACTGGAACTTCTTTGTCTTTAAAGAATTACAAAGGACCTTGTTTCTTTGTTGTTACCTTGGTTCGCAGCTCATCGGTTTAGCCTTGTTTTTATGGTTCCACGTTTCTCCCTTCTCTGCCTTATTTACAGGACATGTTTTTGTTAGAATCATCGTCTGTAACCAATTAAGTTTTCTGATAACTTGATGTATGTTTCTACTCTGAAAATTCTGTCGGCTGGTTTCAATTTGGGAATGGTAGAACAGATACATCAAGTGACAACATTTTAGAGATTATATCTCACCTCATTTTAAAAGATAATAACTTTAGTTTTTGGGTTGTGGTTACTAATAATTACTTATCTTTTAGTGACTTTGAATTAAATCTTATAAGAGTGATAGGTGAAGATGGAGTAGGGGAAGGAGGAAGGGTAGTGATTTTTGTATCATTTTCTGTTGCCTATTGCTGCTGAACATGAATAATGAATCCTTCTCTGCCTGATATCATTTATAGACACGACCTAATAATCCACCTCAAGTTTTGAGCAATTTACTCCAAGGAATTTTAATTTAAGTTCTGCAATGTTGTCTTGCTTTTATTGGGATATTCTTAGAATCATTTTTGAACAAAATAATATTGCATTTGATTAGTTTAATTGTTTGCATTGCATCACCAGGACTATGGGAAATGCCCTGTTACAGGCGAACCTCTTTCCATTGATGACATCGTTCCAATTAAAACTGGAAAGGTAGGAAATATCTCTAATTTTATTTAGTTCAATTCCTAACATTTTTGGGCCCTTCTGCATTTCTCTGTAAAACTTGTGTGTGGAATATTGCATGTTGGTGTGGATTTGGACAAACAATGGCCAATTGGTATGTCGAGTGGTCTGTAATCTGCCTAACTCTATTTGATGAAGCTAAAGAGTGCAGGGGTTAAATGCTAGAGACATCAGATAACCTAATTTATTTTCCATCTGAGTGTATTTTTTTTTTCTTTCTAGTTTCCATCTTTAACTCTCATTATTTTTTCTGCAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTCGGAATGTTCCAGAATGTATGAAATTATGGTCTAGTTGTACTTTTGATCATTATTCTGGAAAATTCTATATTTCATTATGTAATCATGGAAAATTATATATTTNGTTGTACTTTTGATCATTATTCTGGAAAATTCTATATTTCATTCGTGTAATCATGGAAAATTATATATTCTTCATTTCTGTTTTTCATGGATTTTTGTTTATCTTGTGATGTATCTGTATGGCGTATGTGGCAGTATAATATTTTATGTTAAACTTTTTATCAAGTTACATCTTACACCCCCATTTCTTGAGTAAGCATGGGGTGCAATATAGTGAGAAAAAAGTGAATGTTTATCATACGTATTTTCTAGTAATTTATCTCTAGCAGGTTATGGCCTTATATCCTTAGGTATTGTGTACTTGACGATTGCCATTCTTTAAGCTTATGTGTCATATCATATTTAGGCGTTCATGTTGAAATTTGATTGCTAAGCTATTTTCATGTATTATGTAGGTTGTTTAATATGCATTCTTCTTTAGAAACTCTGTTGAAATTTAAGCTATCTTGTGCCTTAAGTTCTAGGATGTATTTCTATAATTATTATTTCTATTTGATTTGTAGGTTCTAACATAAAATTGTGTTATACTTATTTCTCTGTGTTTTTTTTAATCCTGCTATTACATATACTGTTTTCTTTTTAAATTAAAGCTAAAAATATGATTTTTCTGTAATGATAGGAATGGGATGTTTTGGTGCTGTCCAATTTTGCACTGGAGCAACAGTTGCATACAGCCAGACAGGAACTTAGTCATGCCTTATATCAGGTATATAATTTTTTTGTAAAAATTCATTTAAGTCCCGATTTCCAAGTGTGCAGAAAACTAGTGTATCTGTTATTTCAACTTAGGTATTGTAATCAATGTGTAATACCTCTTTGTTGATTTCATCTTTGTTCCATAATTCATCACCATGGACATTTTTGCCTTGGTTCAATATGTTAGACACATTTATGTTTTGCTACTTGGTGAAGTCATGGTGAGGTGACTTATGTTACAAGTCTAACTTGGTTTAATATCTTTTATTTCTTATAGCATGATGCAGCCTGTCGTGTAATTGCAAGACTTAAAAAGGAACGGGATGAAGCTAGGTCATTACTTGCTCAGGCAGAGAGGCAGATGCCCTTGTCATCAACTTCAATATCATCCAATGCTGCTGTCAATGTTAATGGCAAAAGAGGTTTGTCCTTTCAATCATCCCATCAGCGGGATTTTCATGAATTTTCTGGTTCTGATTTGCCTTGATTTTTCTTTGTGCCAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTTCCCTTTCACAACAAAGGAAGAAGCGGCAGGTATTTGATGACAATAAAAATTTATTCAAATATCATTATTTCTTGTTAAAGAAAAAGAGAAAATTGGTGAATGGATAACGTAAATGTTTAAGATATTAAGGTTTCCATGTAATGTGCATTAATTCATTATTTGGTTCTTTGTTCTCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTTTAGAGAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAACAAACCAGGGATTATATCTCTTGACATCAATCATGAGAAGGTACGATTCTCAAGTGCATCAGCCTATATTAGCTTTCTTAAATTAGTGTTATATGGCCTTCATTTAAACAATTCCTTGAAGTCATACTTGCAAGTGTGACTAACTATTTTATTCAATCTAACCAATGGGCTTTTTTGGGATGAAGAATGGGACATGCATGCATTAAAAATTTGTGTGAGAGTTCATTCCTTTTGCTTCGTTTTCCCCTTATAATAATTAAAACTTTTAAGCCATAAAATAAGAATAGTTCAAATATTTAGAATGATTCATCCTTTTTTTTCTCTCCTTTTCGGTGAAAAGTGAAACTCATTAAAATTAAGTGGACATAAGTTGGTGATAATTTTGTCAATAATTTTGCAGTCATTAATTTAATCACGATAAGCTATTCTAGTAACTAATGTGATTTTAAGCATGGGGATCATGTCCACATGCCTAATAATCGAGCCATGTCTTAAAAACCTTCTATCATTCGTTGTTCATCTTGTTATGATAATTGATTATGCGTCTGCATGATGGTGAGTTAAAGGTTAATTTTCCTTTTTGATTTTTTGAACTATTGTATTCTAGAAAAACAATAGCCCTCGTCAATACTAAATCCCAAATTTGCTCCTCAGTCAAGAAATTTCATATTGCTGGTTTTAGGATGTCATTGCGACTGGAGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTGAGTGGTCATTCAAAGAAGGTTGCTGGATAGTACATCCAAGTGCTGGAGCTATTTATTATTAATATTATTTGCTAATGAGAACATTGAACATTGTTTGTTTAGGTAACAAGTGTCAAATTTGTCACCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGGTGAGTTTTTTTCATTATGGTTTTGAGAGGAAAAAAATTTCTATTTTTGATTTTATGTTAAAAAATTTCTGTTTGCAATTTTTGAGGCTGCCAGGCAACTTCCGAAGGAGATCACATTGTCATCTTTGGCTGAGCATTGTCAATTCCTNAGAGGAAAAAAATTTCTATTTTTGATTTTATGTTAAAAAATTTTTGTTTGCAATTTTTGAGGCTGCCAGGCAACTTCCGAAGGAGATCACATTTTCATCTTTGGCTGAGCATAGTCAATTCCGAACCAGATTTAATTAATTTTTGAAAAACAAATGAACTGCTGTCATCCTTAAATTCTTGGTAGCTAAGTAGTAGTGCTAGGTTTAATAATTTTAACATATAAATGAACAGCTTTTGCTTTGGTCCATAAATTCTTTGTTCTAACTGAGTGCCTTAGGTTCGTTTACTCTGGCTTCATGGACATAGTTATTTTAACTTAACCAGGATTNCATAAATTCTTTGTTCTAACTGAGTGCCTTAGGTTCGTTTACTTTGGCTTCATGGACATAGTTATTTTAACTTAACCAGGATGATCATGCCATACCGTATGAACTATTTTTATTATTTTTCCAATCTAAACTCTTGCTATTTTTCTGGATTGAATCTGAGAGAAATAAGAACTTCTATTCCTAATTGTGCAGACTGTCCGTGTGTGGCAACCATCTGATGACGGGAACTATAATTGTAGACACATTTTAAAGGATCACACAGCTGAGGTAAGTCAAATTTAATTCAATGGTCACTAAAATAATTGATTATTGCTGATTACAACTGAAGCAAGGTTAAAAAACTCCACCAAGTTATGTGTGACTGGTTGTGTTGTCCCAATTGCTAAGAGTATGATAACAATCTATGATACCAAAGAATTATTAAATAGGAGCTGAATGGTTCTGATTTTGTATGACTTAATTTCACGCCTTAATGAAGTGTAAAGGAACCTCAACTTTCTAAAATCTTACAGGTCCAAGCTGTTACCGTCCATGCTACCAACAACTTCTTTGTTACTGCCTCCCTTGATAACACATGGTGTTTTTATGACCTTGCTTCAGGATTATGCCTAACCCAGGTTAGTAAGGATCTTAATTTTTCATCACTGTAAGTTCGTTTACTACAATGTCTTAAATGTGTTGTGATTACTTTACTTGACTCGATATTTTTATGTCCACACTATTGTGTATGCTCTAGGTGCTAGGCCTTTTATGTTTTTGTTTCTGAAAGATTGATGATTAGCTGTCGATATACTTTCAAATATATGATTTAACTCTGTCAATTGGTTAGGATAGGTAAAGGTTTTGGATTCGGTTAAGAAATTTTCCGCTTTCTAAATTTATTGGGATTCGATATCNTCAATTGGTTAGGATAGGTAAAGGTTTTGGATTCGGTTAAGAACTTTTCCGCTTTCTAAATTTATTGGGATTCGATATCCATGTAGACAAAATTCCTCAATGTTGAAGAGTGGTCAGTAGGTCATAGAGTAATCATTGACCTATACATAACACTATTATAAGCTATTATTGAATACAAGGGCACTAAAGAGCCTTAAAACGTATGTTCCTCAAATCTGATGTTCCACATTTAGTCTCCTTTAAACAACGATTATTGAACACCAAATATGGTCATAGAATTGATTGAACTATTGAGGAAAAGAACTTATCTAAATAATGTGCTGTGCTGCCGGCCTAACATATTGTTGAGAATAAGTTTGTGTTTGCCATTTGACTAACATGTCAAGTTTTGGGCTAGTGGTAGGGTCTGAAAGTTGTCTGCGTTTTGTAGGCAATGTACAAGGGTCTGAACTGTTCCCATGTTAAGCACGTACAAGTTACTTTTAGGACATCACAAGTTTTTTTCTGAAATATTGTTCTATTTTGCAGTCACACATGATCAAATAAAAATAGAATGTTGTAGTTTTTAATAAAGGACGCCCATTGGCATTTTTATAACCCGTTTTTGGTTGGCTGGAAATGGGTATGGATGTATGGTTGGGTTATGACGTTTCAAATAAGTGGAATGTTAAGGCTACCATCAATGTCTCAGTTATGCTGTAAAATGATTCACGTTGTCTATCTCTGCTTGAATTATAGCAATTTTATCTTATCCTCCACAGGTTGCAGAGGCTTCAGGAACGGAGGGCTACACATCTGCTGCCTTCCATCCTGATGGTCTCATCCTTGGAACGGGCACGTCGGAGGCCCTTGTTAAAATTTGGGATGTAAAAAGTCAGGTGTGAAATTTTCTTACTCTTGCAAGATGCATTCCCATATCTCTAAATTCATACACTCATTTCTGTAATGTTTTTGCTTACAGAAAAATGTGGCTAGATTTGATGGACACGTTGGGGCAGTGACAGCTATATCTTTTTCTGAAAATGGTTACTTCCTTGCGGTATGTGTTAAATTGTTACAATTAAGGGTAATGTTTAACTTTGACATAACTGCAACTAATAAATATCTAAACTGCAGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAATTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCCGGTATGTTTCCTTTTGTGGATGCCGAATGATATAAGATTTTACGATTTCTGTAGCATCTTTTCGATTAAGCCCGACATTTATTCGTCTTGCTTGTTGGAATTTCTGAACATCTGTTTCTGGTTCTGTAGTGGAATTTGACCATAGTGGATCTTACCTTGCAATTGCTGGCTCAGATATAAGGTAAGCGTTTGACCCTTGGAATTACTTCTAACCTTCCCCCTATTTATTATTGGAAATATGAACGAACCAAACGCTTTTTAGTTTAAAAATCATCCCCCCATCATCCTCATTCGATTCTGCCTGCGACGATAGAGAACAATAAGCTAGTAAGGTTTATGTATTACTCATTTTTAGTTCATCAGCAATTTTTATAACGTTTAATGTCGAGGCTTTAACACGCAGAGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTATCTGGCACAGGTACCACAACATTACAAATAACTGCAACTATATAATACAAAACTGGCGCTGATGAAAATTGGGTTCTACTTCTTTTCAGGTAAAGCAACCTGCCTAAAATTCGGAACGGATGCAAAATACTTGGCAGTCGGATCCATGGATCGAAATCTTCGGATTTTTGGTGTGCCTGGGGAAGACGGCCCGATGGAGACATAAGTTGAAATTCTGGAAAAGATGAACGCTAGCTTCCCGCTATATTTGCCCAATTACAGGTTTGAATTATGAAATTTAAAAACCAGATTATGAAGCAGAGGCATCTTTTAAAGATACTCCAGCAAAATTGAGGGTTACAACACCCAGATCAAAAATTTCACCAATTTTTTCTTCTTCTAGTAGTTTGAACTAATCTCGTTTCTATGAATGTATTATTTTGTTGAGTAAAAAGATTATGTAGCTGTGTCACCTTCAGGTAGCCATAGAACTGTTAATATACGCTGACATTTTTTATTGGCCGTTCTTTTGCATTTTGGCAGTGAAAAAACTTTAATAGAATTATCCTTATTACTGTTCGACATTTGCTTTAATATGTTCATTGTTACTGTATTTTAAATTGAATATTCAGTTTGATAATGTATTTGCTTACAATA

mRNA sequence

TAAGCTTTTGAAAATCCCTAGTATCATCTCGCGGTACCTCTTTTCCCCGATCTCTCTCTTTCACTCCCTTTCCTCTCGCGCTGCTGGTTGCCGACTGTCCAGCAGTGCCGTCCGCCGTCTGAGAAAATCCTACTGCACCGCCACTCCACTCATAAACCCTAGTTCTCCGCTAAAATGAACTGCTCTATCTCCGGCGAGATTCCGGAAGAGCCAGTTGTCTCTAAGAATTCTGGATTACTCTTCGAGAAGCGGTTAATCGAGAGGCACATTTCAGACTATGGGAAATGCCCTGTTACAGGCGAACCTCTTTCCATTGATGACATCGTTCCAATTAAAACTGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTCGGAATGTTCCAGAATGAATGGGATGTTTTGGTGCTGTCCAATTTTGCACTGGAGCAACAGTTGCATACAGCCAGACAGGAACTTAGTCATGCCTTATATCAGCATGATGCAGCCTGTCGTGTAATTGCAAGACTTAAAAAGGAACGGGATGAAGCTAGGTCATTACTTGCTCAGGCAGAGAGGCAGATGCCCTTGTCATCAACTTCAATATCATCCAATGCTGCTGTCAATGTTAATGGCAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTTCCCTTTCACAACAAAGGAAGAAGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTTTAGAGAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAACAAACCAGGGATTATATCTCTTGACATCAATCATGAGAAGGATGTCATTGCGACTGGAGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTGAGTGGTCATTCAAAGAAGGTAACAAGTGTCAAATTTGTCACCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGACTGTCCGTGTGTGGCAACCATCTGATGACGGGAACTATAATTGTAGACACATTTTAAAGGATCACACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAACAACTTCTTTGTTACTGCCTCCCTTGATAACACATGGTGTTTTTATGACCTTGCTTCAGGATTATGCCTAACCCAGGTTGCAGAGGCTTCAGGAACGGAGGGCTACACATCTGCTGCCTTCCATCCTGATGGTCTCATCCTTGGAACGGGCACGTCGGAGGCCCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCTAGATTTGATGGACACGTTGGGGCAGTGACAGCTATATCTTTTTCTGAAAATGGTTACTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAATTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCCGTGGAATTTGACCATAGTGGATCTTACCTTGCAATTGCTGGCTCAGATATAAGAGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTATCTGGCACAGGTAAAGCAACCTGCCTAAAATTCGGAACGGATGCAAAATACTTGGCAGTCGGATCCATGGATCGAAATCTTCGGATTTTTGGTGTGCCTGGGGAAGACGGCCCGATGGAGACATAAGTTGAAATTCTGGAAAAGATGAACGCTAGCTTCCCGCTATATTTGCCCAATTACAGGTTTGAATTATGAAATTTAAAAACCAGATTATGAAGCAGAGGCATCTTTTAAAGATACTCCAGCAAAATTGAGGGTTACAACACCCAGATCAAAAATTTCACCAATTTTTTCTTCTTCTAGTAGTTTGAACTAATCTCGTTTCTATGAATGTATTATTTTGTTGAGTAAAAAGATTATGTAGCTGTGTCACCTTCAGGTAGCCATAGAACTGTTAATATACGCTGACATTTTTTATTGGCCGTTCTTTTGCATTTTGGCAGTGAAAAAACTTTAATAGAATTATCCTTATTACTGTTCGACATTTGCTTTAATATGTTCATTGTTACTGTATTTTAAATTGAATATTCAGTTTGATAATGTATTTGCTTACAATA

Coding sequence (CDS)

ATGAACTGCTCTATCTCCGGCGAGATTCCGGAAGAGCCAGTTGTCTCTAAGAATTCTGGATTACTCTTCGAGAAGCGGTTAATCGAGAGGCACATTTCAGACTATGGGAAATGCCCTGTTACAGGCGAACCTCTTTCCATTGATGACATCGTTCCAATTAAAACTGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTCGGAATGTTCCAGAATGAATGGGATGTTTTGGTGCTGTCCAATTTTGCACTGGAGCAACAGTTGCATACAGCCAGACAGGAACTTAGTCATGCCTTATATCAGCATGATGCAGCCTGTCGTGTAATTGCAAGACTTAAAAAGGAACGGGATGAAGCTAGGTCATTACTTGCTCAGGCAGAGAGGCAGATGCCCTTGTCATCAACTTCAATATCATCCAATGCTGCTGTCAATGTTAATGGCAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTTCCCTTTCACAACAAAGGAAGAAGCGGCAGATACCTCCTACGTTGGTTCCTGTTGAGGCTTTAGAGAGTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAACAAACCAGGGATTATATCTCTTGACATCAATCATGAGAAGGATGTCATTGCGACTGGAGGGCTGGACACAAATGCTGTTCTTTTTGGTCGATCATCTGGGGAGATTTTATCTACACTGAGTGGTCATTCAAAGAAGGTAACAAGTGTCAAATTTGTCACCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGACTGTCCGTGTGTGGCAACCATCTGATGACGGGAACTATAATTGTAGACACATTTTAAAGGATCACACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAACAACTTCTTTGTTACTGCCTCCCTTGATAACACATGGTGTTTTTATGACCTTGCTTCAGGATTATGCCTAACCCAGGTTGCAGAGGCTTCAGGAACGGAGGGCTACACATCTGCTGCCTTCCATCCTGATGGTCTCATCCTTGGAACGGGCACGTCGGAGGCCCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCTAGATTTGATGGACACGTTGGGGCAGTGACAGCTATATCTTTTTCTGAAAATGGTTACTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAATTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCCGTGGAATTTGACCATAGTGGATCTTACCTTGCAATTGCTGGCTCAGATATAAGAGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTATCTGGCACAGGTAAAGCAACCTGCCTAAAATTCGGAACGGATGCAAAATACTTGGCAGTCGGATCCATGGATCGAAATCTTCGGATTTTTGGTGTGCCTGGGGAAGACGGCCCGATGGAGACATAA

Protein sequence

MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET

Homology

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy Swiss-Prot
Match: Q9AV81 (Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 PE=2 SV=1)

HSP 1 Score: 822.0 bits (2122), Expect = 3.8e-237
Identity = 397/522 (76.05%), Postives = 460/522 (88.12%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           M C+ISGE+P+EPVVSK SGLLFE+RL+ER+I D+GKCPVT E L++DDIV +KT K+VK
Sbjct: 1   MICAISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           PR  QAASIPG+LGMFQNEWD ++LS+FALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDEAR+LLAQAERQ+P S    +  A V+ NGKR  ED E+GPDGKKIRPGI+  +I E
Sbjct: 121 ERDEARALLAQAERQIPASMAGAAPTAVVS-NGKRAFED-EVGPDGKKIRPGINPVMIDE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LT+CN  LS  RKKRQ+PPTL  ++A+E YTQISSHPLHKTNKPGI+S+DI+  KD+IAT
Sbjct: 181 LTECNTMLSAHRKKRQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+DTNAVLF R SG+IL TL+GHSKK+TS+KFV RD+LF+TGSADKTV++WQ S++GNY
Sbjct: 241 GGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSA 360
           NC H LKDHTAEV+AVTVHAT  +FVTAS DNTWCFYD+ SG CLTQV E+SG EGYTSA
Sbjct: 301 NCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTSA 360

Query: 361 AFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVK 420
           +FHPDGLILGTGT+EA+VKIWDVK+Q NVA+F+GHVG VTA+SFSENGYFLATAA DGVK
Sbjct: 361 SFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDGVK 420

Query: 421 LWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIP 480
           LWDLRKL+NFRT +PYDS+TPTNSVEFD SGSYLA+ GSD RVYQVA+VK EWN +KT+P
Sbjct: 421 LWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVKTLP 480

Query: 481 DLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPME 521
           DLSGTGK T +KFGTDAKY+AVGSMDRNLRIFG PGED  M+
Sbjct: 481 DLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGHPGEDDQMD 520

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy Swiss-Prot
Match: O22785 (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19B PE=1 SV=3)

HSP 1 Score: 783.5 bits (2022), Expect = 1.5e-225
Identity = 384/518 (74.13%), Postives = 446/518 (86.10%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHISDYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDEAR LLA+ ER +P +  ++++NAA++ NGKR   DEELGPD KK+ PGISA +I+E
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAALS-NGKRAAVDEELGPDAKKLCPGISAEIITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQ+RKKRQIP TL  ++ LE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+D  AVLF R SG+ILSTL+GHSKKVTSVKFV   DL LT SADKTVR+W+   DGNY
Sbjct: 241 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSA 360
            C + L DH+AEV+AVTVH TN +FV+ASLD TWCFYDL+SG CL QV++ S    YT+A
Sbjct: 301 ACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAA 360

Query: 361 AFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVK 420
           AFHPDGLILGTGTS+++VKIWDVKSQ NVA+FDGH G VTAISFSENGYFLATAA DGV+
Sbjct: 361 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVR 420

Query: 421 LWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIP 480
           LWDLRKL+NF++F   D+    NSVEFD SGSYL IA SDI+VYQ ASVK+EWN IKT+P
Sbjct: 421 LWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLP 480

Query: 481 DLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGED 517
           DLSGTGKATC+KFG+DA+Y+AVGSMDRNLRIFG+PG++
Sbjct: 481 DLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDE 513

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy Swiss-Prot
Match: Q94BR4 (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19A PE=1 SV=1)

HSP 1 Score: 782.3 bits (2019), Expect = 3.3e-225
Identity = 391/519 (75.34%), Postives = 449/519 (86.51%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+PEEPVVSK SGLL+EKRLI+ HISDYGKCPVTGEP ++DDIVPIKTGKIVK
Sbjct: 1   MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDE+R LLA+AERQ+P +    +SNAA++ NGKR  +D E GP+ KK+R GISA VI+E
Sbjct: 121 ERDESRQLLAEAERQLPAAPEVATSNAALS-NGKRGIDDGEQGPNAKKMRLGISAEVITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQQRKKRQIP TL  V+ALE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+DT AVLF R SG+ILSTL+GHSKKVTS+KFV   DL LT S+DKTVR+W  S+DGNY
Sbjct: 241 GGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTE-GYTS 360
             RH LKDH+AEV+AVTVHATN +FV+ASLD+TWCFYDL+SGLCL QV +AS  +  YT+
Sbjct: 301 TSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGT++++VKIWDVKSQ NVA+F GH G +T+ISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKLKNFRTF   D+    NSVEFDHSGSYL IA SDIRV+Q ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTL 480

Query: 481 PDLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGED 517
           PDLSGTGKAT +KFG D+KY+AVGSMDRNLRIFG+P +D
Sbjct: 481 PDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDD 514

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy Swiss-Prot
Match: Q9UMS4 (Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.4e-109
Identity = 224/517 (43.33%), Postives = 319/517 (61.70%), Query Frame = 0


Query: 3   CSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVKPR 62
           CSIS E+PE P VS  S  ++E+RLIE++I++ G  P+  +PLS + ++ IK    ++P+
Sbjct: 5   CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64

Query: 63  --QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
              A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL KE 
Sbjct: 65  PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124

Query: 123 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 182
             AR  LA  + Q  L       ++  +V G    E  +LG        G++  +I +L 
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGE-----LVGMTPEIIQKLQ 184

Query: 183 DCNASLSQQRKKR--QIPPTLVPVEALESYTQISSH-PLHKTNKPGIISLDI-NHEKDVI 242
           D    L+ +RKKR   +P  LV  E L  Y Q++SH  LH  + PGI++LD+   + + I
Sbjct: 185 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 244

Query: 243 ATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDG 302
            TGG D N V+F +SS +IL+TL GH+KKVTSV F    DL  + S D T+R+W      
Sbjct: 245 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVP--- 304

Query: 303 NYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYT 362
           N +C  +++ H + V  +++HAT ++ +++S D  W F D+ +G  LT+V + +     T
Sbjct: 305 NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLT 364

Query: 363 SAAFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHD- 422
            A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LATAA D 
Sbjct: 365 CAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDS 424

Query: 423 GVKLWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIK 482
            VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+++Y    +  +W  I 
Sbjct: 425 SVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEIL 484

Query: 483 TIPDLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGV 513
              + SG    T + FG  AK++A   MDR+L+ + +
Sbjct: 485 HFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy Swiss-Prot
Match: Q08E38 (Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 3.9e-109
Identity = 223/517 (43.13%), Postives = 319/517 (61.70%), Query Frame = 0


Query: 3   CSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVKPR 62
           CSIS E+PE P VS  S  ++E+RLIE++I++ G  P+  +PLS + ++ IK    ++P+
Sbjct: 5   CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64

Query: 63  --QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
              A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL KE 
Sbjct: 65  PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124

Query: 123 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 182
             AR  LA  + Q  L       ++  +V G    E  +LG        G++  +I +L 
Sbjct: 125 TAAREALATLKPQAGLIVPQAVPSSQPSVVG--AGEPMDLGE-----LVGMTPEIIQKLQ 184

Query: 183 DCNASLSQQRKKR--QIPPTLVPVEALESYTQISSH-PLHKTNKPGIISLDI-NHEKDVI 242
           D    L+ +RKKR   +P  LV  E L  Y Q++SH  LH  + PGI++LD+   + + I
Sbjct: 185 DKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKI 244

Query: 243 ATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDG 302
            TGG D N V+F +SS +IL+TL GH+KKVTSV F    +L  + S D T+R+W      
Sbjct: 245 LTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP--- 304

Query: 303 NYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYT 362
           N +C  +++ H + V  +++HAT ++ +++S D  W F D+ +G  LT+V + +     T
Sbjct: 305 NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLT 364

Query: 363 SAAFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHD- 422
            A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LATAA D 
Sbjct: 365 CAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDS 424

Query: 423 GVKLWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIK 482
            VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+++Y    +  +W  I 
Sbjct: 425 SVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEIL 484

Query: 483 TIPDLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGV 513
              + SG    T + FG  AK++A   MDR+L+ + +
Sbjct: 485 HFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504

[Close]

BLAST of Cp4.1LG08g03220 vs. NCBI nr
Match: XP_023539473.1 (pre-mRNA-processing factor 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1042 bits (2694), Expect = 0.0
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG
Sbjct: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC
Sbjct: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. NCBI nr
Match: KAG7028804.1 (Pre-mRNA-processing factor 19 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1040 bits (2688), Expect = 0.0
Identity = 520/521 (99.81%), Postives = 520/521 (99.81%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHI DYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG
Sbjct: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC
Sbjct: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. NCBI nr
Match: XP_022939894.1 (pre-mRNA-processing factor 19-like [Cucurbita moschata])

HSP 1 Score: 1037 bits (2682), Expect = 0.0
Identity = 519/521 (99.62%), Postives = 519/521 (99.62%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHI DYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG
Sbjct: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC
Sbjct: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAE SGTEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEDSGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. NCBI nr
Match: KAG6597340.1 (Pre-mRNA-processing factor 19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1037 bits (2682), Expect = 0.0
Identity = 519/521 (99.62%), Postives = 519/521 (99.62%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHI DYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG
Sbjct: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC
Sbjct: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
            HILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF
Sbjct: 301 SHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. NCBI nr
Match: XP_022157967.1 (pre-mRNA-processing factor 19-like [Momordica charantia])

HSP 1 Score: 1013 bits (2620), Expect = 0.0
Identity = 504/521 (96.74%), Postives = 515/521 (98.85%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSK SGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKKSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWD LVLSNFA+EQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDALVLSNFAVEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSIS+NAAVNVNGKRVNEDEELGPDGKKIRPGI+ATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISTNAAVNVNGKRVNEDEELGPDGKKIRPGITATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNA+LSQQRK+RQIPPTLVPVEALESYTQISSHPLHKT+KPGIISLDI+HEKDVIATGG
Sbjct: 181 DCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLF RSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYNC
Sbjct: 241 LDTNAVLFDRSSGEILSTLSGHSKKVTSVKFVARDDLFLTGSADKTVRVWQQSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFY+LASGLCLTQV+EASGTEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVSEASGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLA+AGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAMAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFG DAKYLAVGSMDRNLR+FGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGPDAKYLAVGSMDRNLRMFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy TrEMBL
Match: A0A6J1FIG8 (Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3 SV=1)

HSP 1 Score: 1037 bits (2682), Expect = 0.0
Identity = 519/521 (99.62%), Postives = 519/521 (99.62%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHI DYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG
Sbjct: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC
Sbjct: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAE SGTEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEDSGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy TrEMBL
Match: A0A6J1DVX5 (Pre-mRNA-processing factor 19 OS=Momordica charantia OX=3673 GN=LOC111024564 PE=3 SV=1)

HSP 1 Score: 1013 bits (2620), Expect = 0.0
Identity = 504/521 (96.74%), Postives = 515/521 (98.85%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSK SGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKKSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWD LVLSNFA+EQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDALVLSNFAVEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSSTSIS+NAAVNVNGKRVNEDEELGPDGKKIRPGI+ATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTSISTNAAVNVNGKRVNEDEELGPDGKKIRPGITATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNA+LSQQRK+RQIPPTLVPVEALESYTQISSHPLHKT+KPGIISLDI+HEKDVIATGG
Sbjct: 181 DCNAALSQQRKRRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAVLF RSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYNC
Sbjct: 241 LDTNAVLFDRSSGEILSTLSGHSKKVTSVKFVARDDLFLTGSADKTVRVWQQSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFY+LASGLCLTQV+EASGTEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVSEASGTEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLA+AGSDIRVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAMAGSDIRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFG DAKYLAVGSMDRNLR+FGVPGEDGPMET
Sbjct: 481 SGTGKATCLKFGPDAKYLAVGSMDRNLRMFGVPGEDGPMET 521

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy TrEMBL
Match: A0A6J1E9J5 (Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111431962 PE=3 SV=1)

HSP 1 Score: 998 bits (2581), Expect = 0.0
Identity = 498/521 (95.59%), Postives = 508/521 (97.50%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDD+VPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDMVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSST +SSNAAV+ NGKRVNEDEELGPDGKKIR GISATVISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTPVSSNAAVSGNGKRVNEDEELGPDGKKIRQGISATVISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNA+LSQQRKKRQIPPTLVPVEALESYTQISSHPLHKT+KPGIISLDI+HEKDVIATGG
Sbjct: 181 DCNAALSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAV+F RSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYNC
Sbjct: 241 LDTNAVIFDRSSGEILSTLSGHSKKVTSVKFVARDDLFLTGSADKTVRVWQQSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVT SLDNTWCFY+LASGLCLTQV EAS TEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTTSLDNTWCFYELASGLCLTQVTEASETEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVG VTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGPVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTF+PYDSETPTNSVEFDHSGSYLAIAGSD+RVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFSPYDSETPTNSVEFDHSGSYLAIAGSDLRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFG DAKYLAVGSMDRNLRIFGVPGEDG ME 
Sbjct: 481 SGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGSMEA 521

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy TrEMBL
Match: A0A6J1IWB6 (Pre-mRNA-processing factor 19 OS=Cucurbita maxima OX=3661 GN=LOC111479175 PE=3 SV=1)

HSP 1 Score: 996 bits (2576), Expect = 0.0
Identity = 497/521 (95.39%), Postives = 507/521 (97.31%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDD+VPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDMVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELT 180
           DEARSLLAQAERQMPLSST +SSNAAV+ NGKRVNEDEELGPDGKKIR GISAT ISELT
Sbjct: 121 DEARSLLAQAERQMPLSSTPVSSNAAVSGNGKRVNEDEELGPDGKKIRQGISATFISELT 180

Query: 181 DCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATGG 240
           DCNA+LSQQRKKRQIPPTLVPVEALESYTQISSHPLHKT+KPGIISLDI+HEKDVIATGG
Sbjct: 181 DCNAALSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTSKPGIISLDIHHEKDVIATGG 240

Query: 241 LDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYNC 300
           LDTNAV+F RSSGEILSTLSGHSKKVTS KFV RDDLFLTGSADKTVRVWQ SDDGNYNC
Sbjct: 241 LDTNAVIFDRSSGEILSTLSGHSKKVTSAKFVARDDLFLTGSADKTVRVWQQSDDGNYNC 300

Query: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAAF 360
           RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFY+LASGLCLTQV EAS TEGYTSAAF
Sbjct: 301 RHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVTEASETEGYTSAAF 360

Query: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKLW 420
           HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVG VTAISFSENGYFLATAAHDGVKLW
Sbjct: 361 HPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGPVTAISFSENGYFLATAAHDGVKLW 420

Query: 421 DLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDL 480
           DLRKLKNFRTF+PYDSETPTNSVEFDHSGSYLAIAGSD+RVYQVASVKSEWNCIKTIPDL
Sbjct: 421 DLRKLKNFRTFSPYDSETPTNSVEFDHSGSYLAIAGSDLRVYQVASVKSEWNCIKTIPDL 480

Query: 481 SGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           SGTGKATCLKFG DAKYLAVGSMDRNLRIFGVPGEDG ME 
Sbjct: 481 SGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGSMEA 521

[Close]

BLAST of Cp4.1LG08g03220 vs. ExPASy TrEMBL
Match: A0A5D3D0U3 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002000 PE=3 SV=1)

HSP 1 Score: 993 bits (2567), Expect = 0.0
Identity = 497/522 (95.21%), Postives = 511/522 (97.89%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVS+NSGLLFEKRLIERHI DYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 66  MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 125

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 126 PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 185

Query: 121 DEARSLLAQAERQMPLSSTSISSNA-AVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTS SSNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISEL
Sbjct: 186 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISEL 245

Query: 181 TDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATG 240
           T+CNA+LSQQRK+RQIP TLVPVEALE+YTQISSHPLHKT+KPGI+SLDI+HEKDVIATG
Sbjct: 246 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATG 305

Query: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYN 300
           GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYN
Sbjct: 306 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 365

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFY+LASGLCLTQVAE S TEGYTSAA
Sbjct: 366 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 425

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVA+FDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 426 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 485

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSV+FDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 486 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 545

Query: 481 LSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPMET 521
           LSGTGKATCLKFG DAKYLAVGSMDRNLRIFGVPGEDG MET
Sbjct: 546 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMET 587

[Close]

BLAST of Cp4.1LG08g03220 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-226
Identity = 384/518 (74.13%), Postives = 446/518 (86.10%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHISDYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDEAR LLA+ ER +P +  ++++NAA++ NGKR   DEELGPD KK+ PGISA +I+E
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAALS-NGKRAAVDEELGPDAKKLCPGISAEIITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQ+RKKRQIP TL  ++ LE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+D  AVLF R SG+ILSTL+GHSKKVTSVKFV   DL LT SADKTVR+W+   DGNY
Sbjct: 241 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSA 360
            C + L DH+AEV+AVTVH TN +FV+ASLD TWCFYDL+SG CL QV++ S    YT+A
Sbjct: 301 ACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAA 360

Query: 361 AFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVK 420
           AFHPDGLILGTGTS+++VKIWDVKSQ NVA+FDGH G VTAISFSENGYFLATAA DGV+
Sbjct: 361 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVR 420

Query: 421 LWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIP 480
           LWDLRKL+NF++F   D+    NSVEFD SGSYL IA SDI+VYQ ASVK+EWN IKT+P
Sbjct: 421 LWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLP 480

Query: 481 DLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGED 517
           DLSGTGKATC+KFG+DA+Y+AVGSMDRNLRIFG+PG++
Sbjct: 481 DLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDE 513

[Close]

BLAST of Cp4.1LG08g03220 vs. TAIR 10
Match: AT2G33340.2 (MOS4-associated complex 3B )

HSP 1 Score: 783.5 bits (2022), Expect = 1.1e-226
Identity = 384/518 (74.13%), Postives = 446/518 (86.10%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHISDYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDEAR LLA+ ER +P +  ++++NAA++ NGKR   DEELGPD KK+ PGISA +I+E
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAALS-NGKRAAVDEELGPDAKKLCPGISAEIITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQ+RKKRQIP TL  ++ LE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+D  AVLF R SG+ILSTL+GHSKKVTSVKFV   DL LT SADKTVR+W+   DGNY
Sbjct: 241 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSA 360
            C + L DH+AEV+AVTVH TN +FV+ASLD TWCFYDL+SG CL QV++ S    YT+A
Sbjct: 301 ACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAA 360

Query: 361 AFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVK 420
           AFHPDGLILGTGTS+++VKIWDVKSQ NVA+FDGH G VTAISFSENGYFLATAA DGV+
Sbjct: 361 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVR 420

Query: 421 LWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIP 480
           LWDLRKL+NF++F   D+    NSVEFD SGSYL IA SDI+VYQ ASVK+EWN IKT+P
Sbjct: 421 LWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLP 480

Query: 481 DLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGED 517
           DLSGTGKATC+KFG+DA+Y+AVGSMDRNLRIFG+PG++
Sbjct: 481 DLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDE 513

[Close]

BLAST of Cp4.1LG08g03220 vs. TAIR 10
Match: AT1G04510.1 (MOS4-associated complex 3A )

HSP 1 Score: 782.3 bits (2019), Expect = 2.4e-226
Identity = 391/519 (75.34%), Postives = 449/519 (86.51%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+PEEPVVSK SGLL+EKRLI+ HISDYGKCPVTGEP ++DDIVPIKTGKIVK
Sbjct: 1   MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDE+R LLA+AERQ+P +    +SNAA++ NGKR  +D E GP+ KK+R GISA VI+E
Sbjct: 121 ERDESRQLLAEAERQLPAAPEVATSNAALS-NGKRGIDDGEQGPNAKKMRLGISAEVITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQQRKKRQIP TL  V+ALE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+DT AVLF R SG+ILSTL+GHSKKVTS+KFV   DL LT S+DKTVR+W  S+DGNY
Sbjct: 241 GGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTE-GYTS 360
             RH LKDH+AEV+AVTVHATN +FV+ASLD+TWCFYDL+SGLCL QV +AS  +  YT+
Sbjct: 301 TSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGT++++VKIWDVKSQ NVA+F GH G +T+ISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKLKNFRTF   D+    NSVEFDHSGSYL IA SDIRV+Q ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTL 480

Query: 481 PDLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGED 517
           PDLSGTGKAT +KFG D+KY+AVGSMDRNLRIFG+P +D
Sbjct: 481 PDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDD 514

[Close]

BLAST of Cp4.1LG08g03220 vs. TAIR 10
Match: AT1G04510.2 (MOS4-associated complex 3A )

HSP 1 Score: 781.2 bits (2016), Expect = 5.3e-226
Identity = 390/519 (75.14%), Postives = 449/519 (86.51%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+PEEPVVSK SGLL+EKRLI+ HISDYGKCPVTGEP ++DDIVPIKTGKIVK
Sbjct: 1   MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDE+R LLA+AERQ+P +    +SNAA++ NGKR  +D E GP+ KK+R GISA VI+E
Sbjct: 121 ERDESRQLLAEAERQLPAAPEVATSNAALS-NGKRGIDDGEQGPNAKKMRLGISAEVITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQQRKKRQIP TL  V+ALE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+DT AVLF R SG+ILSTL+GHSKKVTS+KFV   DL LT S+DKTVR+W  S+DGNY
Sbjct: 241 GGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTE-GYTS 360
             RH LKDH+AEV+AVTVHATN +FV+ASLD+TWCFYDL+SGLCL QV +AS  +  YT+
Sbjct: 301 TSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGT++++VKIWDVKSQ NVA+F GH G +T+ISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKLKNFRTF   D+    NSVEFDHSGSYL IA SDIRV+Q ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTL 480

Query: 481 PDLSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGED 517
           PDLSGTGK+T +KFG D+KY+AVGSMDRNLRIFG+P +D
Sbjct: 481 PDLSGTGKSTSVKFGLDSKYIAVGSMDRNLRIFGLPDDD 514

[Close]

BLAST of Cp4.1LG08g03220 vs. TAIR 10
Match: AT2G33340.3 (MOS4-associated complex 3B )

HSP 1 Score: 728.0 bits (1878), Expect = 5.3e-210
Identity = 360/487 (73.92%), Postives = 415/487 (85.22%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHISDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHISDYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSISSNAAVNVNGKRVNEDEELGPDGKKIRPGISATVISE 180
           ERDEAR LLA+ ER +P +  ++++NAA++ NGKR   DEELGPD KK+ PGISA +I+E
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAALS-NGKRAAVDEELGPDAKKLCPGISAEIITE 180

Query: 181 LTDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIAT 240
           LTDCNA+LSQ+RKKRQIP TL  ++ LE +TQ+SSHPLHKTNKPGI S+DI H KDVIAT
Sbjct: 181 LTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIAT 240

Query: 241 GGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNY 300
           GG+D  AVLF R SG+ILSTL+GHSKKVTSVKFV   DL LT SADKTVR+W+   DGNY
Sbjct: 241 GGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNY 300

Query: 301 NCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEASGTEGYTSA 360
            C + L DH+AEV+AVTVH TN +FV+ASLD TWCFYDL+SG CL QV++ S    YT+A
Sbjct: 301 ACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAA 360

Query: 361 AFHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVK 420
           AFHPDGLILGTGTS+++VKIWDVKSQ NVA+FDGH G VTAISFSENGYFLATAA DGV+
Sbjct: 361 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGVR 420

Query: 421 LWDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIP 480
           LWDLRKL+NF++F   D+    NSVEFD SGSYL IA SDI+VYQ ASVK+EWN IKT+P
Sbjct: 421 LWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLP 480

Query: 481 DLSGTGK 486
           DLSGTGK
Sbjct: 481 DLSGTGK 482

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g03220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AV81	3.8e-237	76.05	Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 ...	[more]
O22785	1.5e-225	74.13	Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
Q94BR4	3.3e-225	75.34	Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
Q9UMS4	1.4e-109	43.33	Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1	[more]
Q08E38	3.9e-109	43.13	Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g03220 vs. NCBI nr


Match Name	Identity	Description
XP_023539473.1	100.00	pre-mRNA-processing factor 19-like [Cucurbita pepo subsp. pepo]	[more]
KAG7028804.1	99.81	Pre-mRNA-processing factor 19 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022939894.1	99.62	pre-mRNA-processing factor 19-like [Cucurbita moschata]	[more]
KAG6597340.1	99.62	Pre-mRNA-processing factor 19, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022157967.1	96.74	pre-mRNA-processing factor 19-like [Momordica charantia]	[more]

BLAST of Cp4.1LG08g03220 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FIG8	99.62	Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3...	[more]
A0A6J1DVX5	96.74	Pre-mRNA-processing factor 19 OS=Momordica charantia OX=3673 GN=LOC111024564 PE=...	[more]
A0A6J1E9J5	95.59	Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111431962 PE=3...	[more]
A0A6J1IWB6	95.39	Pre-mRNA-processing factor 19 OS=Cucurbita maxima OX=3661 GN=LOC111479175 PE=3 S...	[more]
A0A5D3D0U3	95.21	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Cp4.1LG08g03220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33340.1	1.1e-226	74.13	MOS4-associated complex 3B	[more]
AT2G33340.2	1.1e-226	74.13	MOS4-associated complex 3B	[more]
AT1G04510.1	2.4e-226	75.34	MOS4-associated complex 3A	[more]
AT1G04510.2	5.3e-226	75.14	MOS4-associated complex 3A	[more]
AT2G33340.3	5.3e-210	73.92	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 390..423 score: 8.65015
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 259..291 score: 12.077406
None	No IPR available	CDD	cd00200	WD40	coord: 223..510 e-value: 8.25943E-53 score: 179.068
None	No IPR available	CDD	cd16656	RING-Ubox_PRP19	coord: 3..54 e-value: 8.89059E-30 score: 108.822
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 1..53
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 297..336 e-value: 4.1E-6 score: 36.3 coord: 339..380 e-value: 1.0 score: 16.9 coord: 207..249 e-value: 27.0 score: 7.9 coord: 470..511 e-value: 0.032 score: 23.4 coord: 383..421 e-value: 3.1E-8 score: 43.3 coord: 424..463 e-value: 4.7 score: 12.7 coord: 252..291 e-value: 8.8E-9 score: 45.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 254..290 e-value: 9.1E-7 score: 29.5 coord: 385..421 e-value: 0.0019 score: 19.0 coord: 299..336 e-value: 0.22 score: 12.4 coord: 472..510 e-value: 0.023 score: 15.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 348..389 score: 10.608706
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 390..430 score: 11.009724
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 259..291 score: 14.61889
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 304..345 score: 8.904377
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 1..66 e-value: 1.5E-21 score: 87.6
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 1..70 score: 24.230139
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..60 e-value: 1.2E-24 score: 87.7
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 199..512 e-value: 1.5E-84 score: 285.4
IPR013915	Pre-mRNA-splicing factor 19	PFAM	PF08606	Prp19	coord: 64..129 e-value: 7.9E-30 score: 102.7
IPR038959	Pre-mRNA-processing factor 19	PANTHER	PTHR43995	PRE-MRNA-PROCESSING FACTOR 19	coord: 1..520
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 220..510

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g03220.1	Cp4.1LG08g03220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0070534	protein K63-linked ubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity