Cp4.1LG08g00190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g00190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG08: 4500365 .. 4502703 (+)
RNA-Seq Expression	Cp4.1LG08g00190
Synteny	Cp4.1LG08g00190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTAATTATGATACTCATAATAGCAAGTTACTATGTATTACTGTAATTAAGGAAGGTGTTTAACTAAGCTGATAATTAGTTATTTCTTCTCGCGTGTTAGCTGTGTAAGCAAGTTAACAAGTTAAGCTGGTTGTGTTAAAGCTATATTTTTCTGTATAAATACGCTCATGGAGGAATGATTAATAATAAGATTCTATTCTCTCTTGTCTTTCAAAATCATAATTCAAATCTTGTTTTTGTTTCTTCGTTTTCTGTCTATCAGGAACAAACCGGTTTCATAGATGAAAGTATTTTCCAAACCAACTAGAAAAGTACTTTCGTCTTGACTTGACTTTGTTCGTAAATAAGACTATTGTAATTTACGTTTTCAGGTTAGATATACATACACACATAGAATTAGCAAGTAAAATTTAAGGGACCGATTTTTATTTCAAAATGATGACCTTCCTTGGATCAGAATTATCTAGCTCGATCTTGACCAACACATGAAGGCACTAACCATCTAAAAAAACCTTGAATCATCCATAATGCCCCAAAACATTACATAACCATGTATGAGGAAGGTCCCTTATTCTCTCAATCCAAAACTTGTTTAATTCAGCATAATTCTTTGTCAACCAAAAACAACGAAGTATATGGTCAAGAACCTAACTCAAATTTATCTACTTAATTTGTAATGGGCCCACAAGACATTTATAAGACTAACTAACTCAATCTTCTCCAACTTTGTTCTTAACTCATGTTCAATCGGTGTGAAATTAGCTCGAGCTTGTTCATACGAAAGGTGAGAAAAGGCTCCTGATGAGTTATGAGTAATCCAAAAATAATAACTTTCGATTAGAAAAATATAACGACCTTATAAGATTTTAGTCTAATCACATAGATTATTTTTGTAGAGATCGTTAGACTATGGAGTCTGATGTTTACTTGTAGATTACTCAACGACTATACATGACAAATGACTATATGTTGTTTTAGTAGAGATCGTTAAGCTATAAAATCTAATTTTTACTTATAGGTTACTTCATAGCTATACCTGATAAATGACTATATATTATTTTAGTAGACATCATTAGACTATGGAACCTAATATTTACTAGTAGGTTACTCAACAACTATACATGTAATGGTCGTAAATAGTCATATATTATCGTTCAACATAAAAATGTGATCAATTTACATAAAGCGAGCCTAATTGTACATTTAATTGAGTTATTTAGTATAATTTTAGAGTATTTGTGCTCAATCATGATGTTAAAGCAAATTTGGAAATAACACAAATTTTTTGGGATGACATAGAAATTATAATCCAAATCAGCAAACGCACGGATCACTGAATATCCAATTAGAAACTTCCTAAGTGGACAAATTATTCTTCTTAGCCCTAAATAGGAAGAAATAAACCATATAAAAGGGGAAAAATTTCCTAAATTGAGAGAGCCACCAAAGTGGAAAAGAACGGAAAATACAACGGCAGAGGATTCTATTCCTGTAAAAACCAGAGAAAATGAGGAAGAAGAACCCTAATTCAGCCGTTGTTGACAATAGAATAAAAAAAAAGACTAGGAAATATAAATTAAGGCAAAGAGGTGATAAACTAAGACAAACAGTTGGACACGAGAGCACAAAGTGGTAAGTATATTGAATTGTTCACAAAAATTATTGTTACTAGAAAATCAAAAGACAAGTTCTCGTAGATAGAAGTGGATAACTCACTTAAAATAAAGATTGAATTGCATAAATTTATGAAATTTTTATTACTACTAAATCAAAAGACAAGTCCTCGTAGATAGAAGTGGATAACTCACTCAAAAGTCGTTGGCGTCTACTGCAAACACTCATTAACTATCCTTTGTTTTCTTTTTTGGTTTCCGTCCCACGGAGGAGGAGCTCATCACCTACTACCTAAAGAACAAGAATGTTGGCAAGGAGTATCTTGTTAGATTTATCAAGGAGATTGATCTGTACAAGTTCGATCCCGAGCAACTCCCAGGTATTTTATTTATCAAATTCCTGATTTTAGCTTTTGAAGATGGAGCACACCTCTGATTCTTTCCATTCCCCTGTTCCTATGCAGAGAAATCATTTATCCCCTCTGATAATTTTGAGTGGTTTTTCTTTCGGGCCAACACCTCCAACACTAAAAGAACCACCACTACTGGCTGCTGGAAATCCACCAGTAAACCCCGCCGAATCAAGCCTCGAGGAACCAACGAACTGATCGGAACTAGACACATTTTTGTGTTCCATCGAGGCAAGGGAGCCAAGGCTGTAAAGACCAATTGGGTGATACACGAGTATATGCTTCACCCACTTGCAGACATCACTTCCCAG

mRNA sequence

ATGCAGGAGGAGCTCATCACCTACTACCTAAAGAACAAGAATGTTGGCAAGGAGTATCTTGTTAGATTTATCAAGGAGATTGATCTGTACAAGTTCGATCCCGAGCAACTCCCAGAGAAATCATTTATCCCCTCTGATAATTTTGAGTGGTTTTTCTTTCGGGCCAACACCTCCAACACTAAAAGAACCACCACTACTGGCTGCTGGAAATCCACCAGTAAACCCCGCCGAATCAAGCCTCGAGGAACCAACGAACTGATCGGAACTAGACACATTTTTGTGTTCCATCGAGGCAAGGGAGCCAAGGCTGTAAAGACCAATTGGGTGATACACGAGTATATGCTTCACCCACTTGCAGACATCACTTCCCAG

Coding sequence (CDS)

ATGCAGGAGGAGCTCATCACCTACTACCTAAAGAACAAGAATGTTGGCAAGGAGTATCTTGTTAGATTTATCAAGGAGATTGATCTGTACAAGTTCGATCCCGAGCAACTCCCAGAGAAATCATTTATCCCCTCTGATAATTTTGAGTGGTTTTTCTTTCGGGCCAACACCTCCAACACTAAAAGAACCACCACTACTGGCTGCTGGAAATCCACCAGTAAACCCCGCCGAATCAAGCCTCGAGGAACCAACGAACTGATCGGAACTAGACACATTTTTGTGTTCCATCGAGGCAAGGGAGCCAAGGCTGTAAAGACCAATTGGGTGATACACGAGTATATGCTTCACCCACTTGCAGACATCACTTCCCAG

Protein sequence

MQEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADITSQ

Homology

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-22
Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFR------AN 62
           EELITYYLK K  G+E  +  I E+DLYK +P  LP KS IPS + EWFFF        N
Sbjct: 17  EELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFFFSPRDRKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYML 116
            S T R T  G WK+T K RR+  R  +  IGT+   V++RG+    ++T WV+HEY L
Sbjct: 77  GSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRTGWVMHEYRL 133

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy Swiss-Prot
Match: O49697 (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-22
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFF------RAN 62
           EELI YYL  K  G E  +  I  IDLYKFDP +LP KSF+P+ + EWFFF       AN
Sbjct: 17  EELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDLEWFFFCPRDKKYAN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLH 121
            S T R T  G WK+T K R+I  + ++ + G R   VF+ G+     +TNW +HEY L 
Sbjct: 77  GSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRAPLGDRTNWFMHEYRLC 136

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy Swiss-Prot
Match: A4VCM0 (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-21
Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFR------AN 62
           EELITYYLK K  G E  +  I E+DLYK +P  LP KS +PS + EW+FF        N
Sbjct: 17  EELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKDQEWYFFSPRDRKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYML 116
            S T R T  G WK+T K RR+  R  +  IGT+   V++RG+    ++T WV+HEY L
Sbjct: 77  GSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRTGWVMHEYRL 133

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 3.7e-21
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRA------N 62
           EELI YYLK K  G E  +  I  IDLY FDP +LP+KSF+P+ + EW+FF +      N
Sbjct: 17  EELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWYFFCSRDKKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLH 122
              T R T  G WK+T K R+I  R ++ +IG R   VF++G+     ++NW++HEY L 
Sbjct: 77  GFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFYKGRAPLGDRSNWIMHEYRL- 136

Query: 123 PLADITSQ 125
              D TSQ
Sbjct: 137 -CDDDTSQ 141

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy Swiss-Prot
Match: F4IED2 (NAC domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=NAC013 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-20
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFF----RANTS 62
           EEL+ YYLK K   K+  V  I E D+YKFDPE+LPEK+   + + +WFFF    R + S
Sbjct: 21  EELVVYYLKRKIRRKKLRVEAIGETDVYKFDPEELPEKALYKTRDRQWFFFSLRDRKHGS 80

Query: 63  NTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLH 117
            + R T  G WK+T K R I     +  +G +   VFHRG+     +TNWV+HEY LH
Sbjct: 81  RSSRATERGYWKATGKDRVI--HCDSRPVGEKKTLVFHRGRAPNGERTNWVMHEYTLH 136

[Close]

BLAST of Cp4.1LG08g00190 vs. NCBI nr
Match: XP_023521437.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251 bits (642), Expect = 5.25e-81
Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK
Sbjct: 23  EEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTTTTGCWKST KPRRIK RGTNELIGTRHIFVFHRGKGA+AVKTNWVIHEYMLHPLADI
Sbjct: 83  RTTTTGCWKSTGKPRRIKARGTNELIGTRHIFVFHRGKGARAVKTNWVIHEYMLHPLADI 142

Query: 122 TSQ 124
           TSQ
Sbjct: 143 TSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. NCBI nr
Match: KAG6596999.1 (NAC domain-containing protein 71, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249 bits (635), Expect = 6.21e-80
Identity = 117/123 (95.12%), Postives = 120/123 (97.56%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLP+KSFIPSDNFEWFFFRANTSNTK
Sbjct: 23  EEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSFIPSDNFEWFFFRANTSNTK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTTTTGCWKST KPRRIK RGTNELIGTRHIFVFHRGKGA+AVKTNWVIHEYMLHPL DI
Sbjct: 83  RTTTTGCWKSTGKPRRIKSRGTNELIGTRHIFVFHRGKGARAVKTNWVIHEYMLHPLTDI 142

Query: 122 TSQ 124
           TSQ
Sbjct: 143 TSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. NCBI nr
Match: KAG7028466.1 (NAC domain-containing protein 71 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 204 bits (519), Expect = 4.97e-65
Identity = 97/123 (78.86%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVG E +V FIKEIDLYKF+PEQLP+KSF PSDNFEWFFFRANTS+TK
Sbjct: 23  EEELITYYLKNKNVGNECVVSFIKEIDLYKFEPEQLPDKSFFPSDNFEWFFFRANTSDTK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTTTTG WKST KPR IK RGTNE+I +R IFVFHRGKG  A+KTNWVIHEY  HP   I
Sbjct: 83  RTTTTGYWKSTGKPRPIKARGTNEVIASRQIFVFHRGKGGNAIKTNWVIHEYKPHPDTKI 142

Query: 122 TSQ 124
            SQ
Sbjct: 143 PSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. NCBI nr
Match: XP_022936585.1 (NAC domain-containing protein 96-like [Cucurbita moschata])

HSP 1 Score: 212 bits (539), Expect = 1.90e-64
Identity = 99/123 (80.49%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLP+KS+ PS NFEWFFFRANT+N K
Sbjct: 23  EEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSYFPSSNFEWFFFRANTANNK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTT TG W+ST  PRRIK R TNE+I T HI+VFHRGKG  A+KTNWVIHEY LH L DI
Sbjct: 83  RTTATGGWRSTGDPRRIKARETNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKLHTLTDI 142

Query: 122 TSQ 124
           TSQ
Sbjct: 143 TSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. NCBI nr
Match: XP_023521433.1 (NAC domain-containing protein 40-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203 bits (517), Expect = 4.17e-63
Identity = 95/123 (77.24%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELIT+YLKNK +G+E+LVRFIKEIDLYKFDPEQLP+KS+ PS NFEWFFFRANTSN K
Sbjct: 23  EEELITHYLKNKILGQEFLVRFIKEIDLYKFDPEQLPDKSYFPSSNFEWFFFRANTSNNK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTT TG W+ST  PRRIK R TNE+I T HI+VFHRGKG  A+KTNWVIHEY LH L DI
Sbjct: 83  RTTATGGWRSTGDPRRIKARETNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKLHTLTDI 142

Query: 122 TSQ 124
           TSQ
Sbjct: 143 TSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy TrEMBL
Match: A0A6J1FE44 (NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111443146 PE=4 SV=1)

HSP 1 Score: 212 bits (539), Expect = 9.22e-65
Identity = 99/123 (80.49%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLP+KS+ PS NFEWFFFRANT+N K
Sbjct: 23  EEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPDKSYFPSSNFEWFFFRANTANNK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTT TG W+ST  PRRIK R TNE+I T HI+VFHRGKG  A+KTNWVIHEY LH L DI
Sbjct: 83  RTTATGGWRSTGDPRRIKARETNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKLHTLTDI 142

Query: 122 TSQ 124
           TSQ
Sbjct: 143 TSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy TrEMBL
Match: A0A6J1IAW4 (NAC domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111472913 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.54e-62
Identity = 97/123 (78.86%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVG E +V FIKEIDLYKF+PEQLP+KSF PSDNFEWFFFRANTS+TK
Sbjct: 23  EEELITYYLKNKNVGNESVVSFIKEIDLYKFEPEQLPDKSFFPSDNFEWFFFRANTSDTK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTTTTG WKST KPR IK RGTNE+I +R IFVFHRGKG  A+KTNWVIHEY  HP   I
Sbjct: 83  RTTTTGYWKSTGKPRPIKARGTNEVIASRQIFVFHRGKGGNAIKTNWVIHEYKPHPDTKI 142

Query: 122 TSQ 124
            SQ
Sbjct: 143 PSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy TrEMBL
Match: A0A6J1IAV9 (protein CUP-SHAPED COTYLEDON 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472910 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 1.84e-59
Identity = 92/123 (74.80%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELIT+YLKNK +G+E+LV+FIKEIDLYKFDPEQLP+KS+ PS NFEWFFFRANT   K
Sbjct: 23  EEELITHYLKNKILGQEFLVKFIKEIDLYKFDPEQLPDKSYFPSSNFEWFFFRANTGINK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTT TG W+ST  PRRIK R TNE+I T HI+VFHRGKG  A+KTNWVIHEY LH L DI
Sbjct: 83  RTTATGSWRSTGDPRRIKARETNEVIATCHIYVFHRGKGGNAIKTNWVIHEYKLHTLTDI 142

Query: 122 TSQ 124
           TSQ
Sbjct: 143 TSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy TrEMBL
Match: A0A6J1I9X2 (uncharacterized protein LOC111472944 OS=Cucurbita maxima OX=3661 GN=LOC111472944 PE=4 SV=1)

HSP 1 Score: 205 bits (522), Expect = 3.95e-59
Identity = 97/123 (78.86%), Postives = 106/123 (86.18%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +EELITYYLKNKNVG E +VRFIKEIDLYKF+P+QLP+KSF PSDNFEWFFFRANTS+TK
Sbjct: 23  EEELITYYLKNKNVGNESVVRFIKEIDLYKFEPDQLPDKSFFPSDNFEWFFFRANTSDTK 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTTTTG WKST KPR IK RGTNE+I +R IFVFHRGKG  A+KTNWVIHEY  HP   I
Sbjct: 83  RTTTTGYWKSTGKPRPIKARGTNEVIASRQIFVFHRGKGGNAIKTNWVIHEYKPHPDTKI 142

Query: 122 TSQ 124
            SQ
Sbjct: 143 PSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. ExPASy TrEMBL
Match: A0A6J1IFR5 (NAC domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472915 PE=4 SV=1)

HSP 1 Score: 193 bits (490), Expect = 8.48e-59
Identity = 92/123 (74.80%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 2   QEELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRANTSNTK 61
           +E+LIT+YLKNKN G E +V FIKEIDLYKF+PEQLP+KSFIPSDNFEWFFFRANT + +
Sbjct: 23  EEQLITHYLKNKNDGNESVVSFIKEIDLYKFEPEQLPDKSFIPSDNFEWFFFRANTLDIE 82

Query: 62  RTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLHPLADI 121
           RTT TG WKST +PR IK RGTNE+IG+R IFVFHRG+GAK VKTNWVI EY LHP   I
Sbjct: 83  RTTGTGSWKSTGEPRPIKARGTNEVIGSRQIFVFHRGRGAKGVKTNWVIREYRLHPDTKI 142

Query: 122 TSQ 124
            SQ
Sbjct: 143 PSQ 145

[Close]

BLAST of Cp4.1LG08g00190 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 )

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 57/119 (47.90%), Postives = 72/119 (60.50%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFR------AN 62
           EELITYYLK K  G+E  +  I E+DLYK +P  LP KS IPS + EWFFF        N
Sbjct: 17  EELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSKDQEWFFFSPRDRKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYML 116
            S T R T  G WK+T K RR+  R  +  IGT+   V++RG+    ++T WV+HEY L
Sbjct: 77  GSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRTGWVMHEYRL 133

[Close]

BLAST of Cp4.1LG08g00190 vs. TAIR 10
Match: AT4G17980.1 (NAC domain containing protein 71 )

HSP 1 Score: 105.9 bits (263), Expect = 2.3e-23
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFF------RAN 62
           EELI YYL  K  G E  +  I  IDLYKFDP +LP KSF+P+ + EWFFF       AN
Sbjct: 17  EELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDLEWFFFCPRDKKYAN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLH 121
            S T R T  G WK+T K R+I  + ++ + G R   VF+ G+     +TNW +HEY L 
Sbjct: 77  GSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRAPLGDRTNWFMHEYRLC 136

[Close]

BLAST of Cp4.1LG08g00190 vs. TAIR 10
Match: AT3G03200.1 (NAC domain containing protein 45 )

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 55/119 (46.22%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFR------AN 62
           EELITYYLK K  G E  +  I E+DLYK +P  LP KS +PS + EW+FF        N
Sbjct: 17  EELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSKDQEWYFFSPRDRKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYML 116
            S T R T  G WK+T K RR+  R  +  IGT+   V++RG+    ++T WV+HEY L
Sbjct: 77  GSRTNRATKGGYWKATGKDRRVSWR--DRAIGTKKTLVYYRGRAPHGIRTGWVMHEYRL 133

[Close]

BLAST of Cp4.1LG08g00190 vs. TAIR 10
Match: AT5G46590.1 (NAC domain containing protein 96 )

HSP 1 Score: 102.4 bits (254), Expect = 2.6e-22
Identity = 57/128 (44.53%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFRA------N 62
           EELI YYLK K  G E  +  I  IDLY FDP +LP+KSF+P+ + EW+FF +      N
Sbjct: 17  EELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWYFFCSRDKKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYMLH 122
              T R T  G WK+T K R+I  R ++ +IG R   VF++G+     ++NW++HEY L 
Sbjct: 77  GFRTNRGTKAGYWKATGKDRKITSR-SSSIIGYRKTLVFYKGRAPLGDRSNWIMHEYRL- 136

Query: 123 PLADITSQ 125
              D TSQ
Sbjct: 137 -CDDDTSQ 141

[Close]

BLAST of Cp4.1LG08g00190 vs. TAIR 10
Match: AT1G65910.1 (NAC domain containing protein 28 )

HSP 1 Score: 100.5 bits (249), Expect = 9.9e-22
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 3   EELITYYLKNKNVGKEYLVRFIKEIDLYKFDPEQLPEKSFIPSDNFEWFFFR------AN 62
           EEL+ YYLK K  G+   +  I EIDLYK +P  LP KS +PS + EWFFF        N
Sbjct: 17  EELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFFFSPRDRKYPN 76

Query: 63  TSNTKRTTTTGCWKSTSKPRRIKPRGTNELIGTRHIFVFHRGKGAKAVKTNWVIHEYML 116
            S T R T  G WK+T K R++     + ++GT+   V++RG+     +T+WV+HEY L
Sbjct: 77  GSRTNRATKAGYWKATGKDRKVTSH--SRMVGTKKTLVYYRGRAPHGSRTDWVMHEYRL 133

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g00190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFI5	1.9e-22	47.90	NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 ...	[more]
O49697	3.3e-22	45.16	NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 ...	[more]
A4VCM0	2.1e-21	46.22	NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 ...	[more]
Q9LS24	3.7e-21	44.53	NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 ...	[more]
F4IED2	1.8e-20	44.92	NAC domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=NAC013 PE=1 ...	[more]

BLAST of Cp4.1LG08g00190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521437.1	5.25e-81	96.75	NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]	[more]
KAG6596999.1	6.21e-80	95.12	NAC domain-containing protein 71, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7028466.1	4.97e-65	78.86	NAC domain-containing protein 71 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022936585.1	1.90e-64	80.49	NAC domain-containing protein 96-like [Cucurbita moschata]	[more]
XP_023521433.1	4.17e-63	77.24	NAC domain-containing protein 40-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG08g00190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE44	9.22e-65	80.49	NAC domain-containing protein 96-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1IAW4	1.54e-62	78.86	NAC domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC11147291...	[more]
A0A6J1IAV9	1.84e-59	74.80	protein CUP-SHAPED COTYLEDON 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1I9X2	3.95e-59	78.86	uncharacterized protein LOC111472944 OS=Cucurbita maxima OX=3661 GN=LOC111472944...	[more]
A0A6J1IFR5	8.48e-59	74.80	NAC domain-containing protein 40-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Cp4.1LG08g00190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17260.1	1.4e-23	47.90	NAC domain containing protein 86	[more]
AT4G17980.1	2.3e-23	45.16	NAC domain containing protein 71	[more]
AT3G03200.1	1.5e-22	46.22	NAC domain containing protein 45	[more]
AT5G46590.1	2.6e-22	44.53	NAC domain containing protein 96	[more]
AT1G65910.1	9.9e-22	42.86	NAC domain containing protein 28	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 2..124 e-value: 1.9E-33 score: 117.4
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 3..117
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 2..115 e-value: 3.7E-22 score: 79.6
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 1..124 score: 32.361717
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 2..115
None	No IPR available	PANTHER	PTHR31989:SF193	NAC DOMAIN CONTAINING PROTEIN 49	coord: 2..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g00190.1	Cp4.1LG08g00190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding