Cp4.1LG07g11460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g11460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	early nodulin-93-like
Location	Cp4.1LG07: 9621217 .. 9622953 (-)
RNA-Seq Expression	Cp4.1LG07g11460
Synteny	Cp4.1LG07g11460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCAGAAAAGAGAAGAAAACAAGAGACTCGGGGAGACGCTGGAATTTGGGAAAACCATCAAACTCTCTTCCACTAATTACACCGACTGAGCTTCAATCTTTCAAAATCCCTTCGGTTCTTGCACTCAGCTTCAATGTTTATAAATACTAAACCGCATTTCAATTCCACTTCAAATCAAATCTTCCCCAATCTTCCCCTGTTTTTTCATTCAACAGCTAATCTCTGCAGCGTTTTTGGTTTCTTGTTCTTCCGACAATGGCGAAAAATTTATCTCAGGCCTTTTTCGAGAGGAAAAATCTGCCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGGTAATGCTTTGTGATCTTTTTCTTTTTCTGGGATTTCTGCTGAGGAACAAAAAACAAAACAAAAAGGAAGTAATGGGTATGTAAGGATCTTAGTTTCTCTAGTTTCTCTAGTTCATTGAACATAGTGATTGGTTGAATCATACTTATAGGGTTTAGATTTGGTTTTTTTGTTAATGCCTTTCAACTGTTCGACGAAATTCCTCAAAGAGGGTTTTGTTCTTTTAGCTTCAAGAATGGATTGTTTTTTTAGTTAATGATTTAAGTAAAAGCTAAAGAGAGACGGGATGTGATCCATGCGCATGTTGATTGGATATATGCTGTGTTCTTTTTACTGATTCTATTGTTTTTGAGTGATTGGCTGGTGGCCCATGATCCACTTCAGATTTGATGCCATGAAAATTAGTGATTTCTGATGTTGTGTTTCTAATAAATTTAGCTTTTATCATCAACATCTGAAGCTAATGAGTTATGTTTCTTCTTTTTTGATGAACAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACAGTGAGTTCCCTTCTTCATGAAGCAAACACGTATCCTTATCTTTCCCTTTTGGAGAATAATTAATATCACTCATCATGTTCTACTTTCGTGTGAAAAATTTGACCAAATTAGCTGAAGAACTAGATCATGAACTGATGTAGATTACCTTAAGTGAATGGCTTAACTTAACCCTCAACTGATTTGTTTAGAGGGTTCAATTGCAGGAGTAATATTTGCCTATAATCCAAATAGGACCTAAAGTTTTAAAGTTTACTACACCAGATTAGAATCTAAAATTTTGCCCATTTTCAATCTACTCCGATCGGGGTTGAGGCTCTGCTTGCTGGTGATATAGAGCTAGCTGCTATCGCCATATTTTTCGAACCAAACAATGAAAGAGCTTAGTTTTTCCGTCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTAGGCTTTTCCTTTTGGGCTTTCCCTCAAGGTTTTTAAAATGCATCTACTAGGAGAGGTTTTCACACCCTTATAAAGAATGCTACGTTCTCCTCTCCAACCGATAACTAGAATTGATATTGTTTTGCAGTTGGCTAGTGTGAGGATGCTGCCATGGGCAAAAGCTCATCTGAATCACACAGCTCAAGCGCTCATAATCTCCACAGGTTCAACTTTTCTCTCTTAGCAGCCAAGTCATGATTTGGTTTCACTTTGATTTGCTTGCTTTACTAAAGGAAAAAGGGTTGATTTTTCACTGGCAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGA

mRNA sequence

TAAACCAGAAAAGAGAAGAAAACAAGAGACTCGGGGAGACGCTGGAATTTGGGAAAACCATCAAACTCTCTTCCACTAATTACACCGACTGAGCTTCAATCTTTCAAAATCCCTTCGGTTCTTGCACTCAGCTTCAATGTTTATAAATACTAAACCGCATTTCAATTCCACTTCAAATCAAATCTTCCCCAATCTTCCCCTGTTTTTTCATTCAACAGCTAATCTCTGCAGCGTTTTTGGTTTCTTGTTCTTCCGACAATGGCGAAAAATTTATCTCAGGCCTTTTTCGAGAGGAAAAATCTGCCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACAGTGAGTTCCCTTCTTCATGAAGCAAACACGGTTGATTTTTCACTGGCAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGA

Coding sequence (CDS)

ATGGCGAAAAATTTATCTCAGGCCTTTTTCGAGAGGAAAAATCTGCCCTCCCATGACCCAAAAGTGGCAATGGCGAAGCGCTGTGCTAAAGAGGGTGTGATAGCAGGGGCAAAAGCAGCTGCCATTGCAAGTGTTGCCACTGCCATTCCCACAGTGAGTTCCCTTCTTCATGAAGCAAACACGGTTGATTTTTCACTGGCAGTGGCTGGAGCAGCATACTTCATAGTGGCTGACAAGACTGTTCTTGCAACAGCAAGAAGAAACTCCTTCAAGCAAAATCCCAACACTGAAGCATATGAACTCAATTGA

Protein sequence

MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSSLLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN

Homology

[Close]

BLAST of Cp4.1LG07g11460 vs. ExPASy Swiss-Prot
Match: Q02921 (Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17
Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAK  S    ER +L S D K+A AKRC+ EGV+AGAKAA +ASVA+AIPT++S      
Sbjct: 1   MAKGNSP--LERPSLASLDQKLAFAKRCSHEGVLAGAKAAVVASVASAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEA 99
               L H A  +  S A A AAYFIVADKTVLATAR+NSF Q  N+EA
Sbjct: 61  ARANLNHTAQALIISTATA-AAYFIVADKTVLATARKNSFNQPSNSEA 105

[Close]

BLAST of Cp4.1LG07g11460 vs. NCBI nr
Match: XP_023537923.1 (early nodulin-93-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156 bits (395), Expect = 3.78e-47
Identity = 91/112 (81.25%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPT++S      
Sbjct: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. NCBI nr
Match: XP_022966025.1 (early nodulin-93-like [Cucurbita maxima])

HSP 1 Score: 151 bits (381), Expect = 5.14e-45
Identity = 89/112 (79.46%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNLSQAF ERKNL SHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPT++S      
Sbjct: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. NCBI nr
Match: XP_022937499.1 (early nodulin-93-like [Cucurbita moschata])

HSP 1 Score: 150 bits (378), Expect = 1.47e-44
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNL+QAF ERKNL SHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPT++S      
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. NCBI nr
Match: XP_038889722.1 (early nodulin-93-like [Benincasa hispida])

HSP 1 Score: 144 bits (364), Expect = 2.00e-42
Identity = 84/112 (75.00%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKN++QAF ERKNL SHDPKVAMAKRCAKEGVIAGAKAAAIAS+ATAIPT++S      
Sbjct: 1   MAKNVAQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 61  AKANLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. NCBI nr
Match: KAG6586404.1 (hypothetical protein SDJN03_19137, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021259.1 hypothetical protein SDJN02_17947 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (363), Expect = 2.84e-42
Identity = 85/112 (75.89%), Postives = 90/112 (80.36%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNL+QAF ERKN+ S DPKVAMAKRCAKEGVIAGAKAAAIASVATAIPT++S      
Sbjct: 1   MAKNLAQAFLERKNMASRDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSF QNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFNQNPNTEAYELN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. ExPASy TrEMBL
Match: A0A6J1HQF2 (early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111465732 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 2.49e-45
Identity = 89/112 (79.46%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNLSQAF ERKNL SHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPT++S      
Sbjct: 1   MAKNLSQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. ExPASy TrEMBL
Match: A0A6J1FBC4 (early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111443891 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 7.13e-45
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNL+QAF ERKNL SHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPT++S      
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTLASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. ExPASy TrEMBL
Match: A0A0A0LFY1 (Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 1.38e-42
Identity = 84/112 (75.00%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNL+QAF ERKN+ SHDPKVAMAKRCAKEGVIAGAKAAAIAS+ATAIPT +S      
Sbjct: 1   MAKNLAQAFLERKNIASHDPKVAMAKRCAKEGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. ExPASy TrEMBL
Match: A0A5A7V781 (Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00100 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 1.95e-42
Identity = 84/112 (75.00%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNL+QAF ERKNL SHDPKVAMAKRCA+EGVIAGAKAAAIAS+ATAIPT +S      
Sbjct: 1   MAKNLAQAFLERKNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTFASVRMLPW 60

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 61  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 111

[Close]

BLAST of Cp4.1LG07g11460 vs. ExPASy TrEMBL
Match: A0A1S3C6F4 (early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1)

HSP 1 Score: 144 bits (362), Expect = 6.26e-42
Identity = 84/112 (75.00%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 1   MAKNLSQAFFERKNLPSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTVSS------ 60
           MAKNL+QAF ERKNL SHDPKVAMAKRCA+EGVIAGAKAAAIAS+ATAIPT +S      
Sbjct: 39  MAKNLAQAFLERKNLASHDPKVAMAKRCAREGVIAGAKAAAIASIATAIPTFASVRMLPW 98

Query: 61  ----LLHEANTVDFSLAVAGAAYFIVADKTVLATARRNSFKQNPNTEAYELN 102
               L H A  +  S  VAGAAYFIVADKTVLATARRNSFKQ PNTEAYE N
Sbjct: 99  AKAHLNHTAQALIIST-VAGAAYFIVADKTVLATARRNSFKQKPNTEAYEFN 149

[Close]

BLAST of Cp4.1LG07g11460 vs. TAIR 10
Match: AT5G25940.1 (early nodulin-related )

HSP 1 Score: 49.3 bits (116), Expect = 2.1e-06
Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 16  PSHDPKVAMAKRCAKEGVIAGAKAAAIASVATAIPTV----------SSLLHEANTVDFS 75
           P    K+  A+   + G IAGAKAAA+A+VA+AIPTV          ++L + A  +  S
Sbjct: 21  PDEIAKIHRAETSKQAGAIAGAKAAAVAAVASAIPTVAAVRMFPWAKANLNYTAQALIIS 80

Query: 76  LAVAGAAYFIVADKTVLATARRNSFKQ 93
            A + AA+FI ADKT+L  ARRN+  Q
Sbjct: 81  SA-SIAAFFITADKTILQGARRNTEAQ 106

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g11460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q02921	2.0e-17	57.41	Early nodulin-93 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of Cp4.1LG07g11460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537923.1	3.78e-47	81.25	early nodulin-93-like [Cucurbita pepo subsp. pepo]	[more]
XP_022966025.1	5.14e-45	79.46	early nodulin-93-like [Cucurbita maxima]	[more]
XP_022937499.1	1.47e-44	78.57	early nodulin-93-like [Cucurbita moschata]	[more]
XP_038889722.1	2.00e-42	75.00	early nodulin-93-like [Benincasa hispida]	[more]
KAG6586404.1	2.84e-42	75.89	hypothetical protein SDJN03_19137, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG07g11460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQF2	2.49e-45	79.46	early nodulin-93-like OS=Cucurbita maxima OX=3661 GN=LOC111465732 PE=4 SV=1	[more]
A0A6J1FBC4	7.13e-45	78.57	early nodulin-93-like OS=Cucurbita moschata OX=3662 GN=LOC111443891 PE=4 SV=1	[more]
A0A0A0LFY1	1.38e-42	75.00	Early nodulin 93 protein OS=Cucumis sativus OX=3659 GN=Csa_2G006090 PE=4 SV=1	[more]
A0A5A7V781	1.95e-42	75.00	Early nodulin-93-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold28...	[more]
A0A1S3C6F4	6.26e-42	75.00	early nodulin-93-like OS=Cucumis melo OX=3656 GN=LOC103497382 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g11460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25940.1	2.1e-06	43.68	early nodulin-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005050	Early nodulin 93 ENOD93 protein	PFAM	PF03386	ENOD93	coord: 21..89 e-value: 3.5E-15 score: 55.6
IPR005050	Early nodulin 93 ENOD93 protein	PANTHER	PTHR33605	EARLY NODULIN-93	coord: 14..92
None	No IPR available	PANTHER	PTHR33605:SF11	EARLY NODULIN-93	coord: 14..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g11460.1	Cp4.1LG07g11460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane