Cp4.1LG07g11390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTATCTCTTCTATTTTATCTGGTTTCGGAGACTCTCTCACCTTCCTAGTTCACCAGAGAATGGTACCAAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCTTCGGCGGAATTTTCACTCTTAGGTTCGCTTCATTTCTCACTATCCAAACGCTCCGCCACACCGCCGAAGCCAAACGGGTAATTCATTTTTCTCTACGAATACACATCTTTCTTTAAAATTAAACTTGTATATCGGGAATGGAAGAAGGCTCGTTAATTCTGAAGCATTTCTTTGATACTATTCTATTCGGATTTTCAATTTTTCGGCAGAGAAAAATCGCTTTGCCCTGTAGGGCTTGTAGAGGAAAAGGATTCTATATTTGCAAATTATGCCGCGGAAATGCAGTCATTCAGTGGTCGCCATTGTCCGATCCTATTGCCATGAACCCCTGCGTGTGCCCGACTTGTGAAGGAAATAGGTTATACTTTTCACCCCCTTTGATCTCGCCTGCTGCTGCTTGTTAGAATTTCCGCAGGATTAGGTTAATGGCATTCCGTTCTTTATGATTTACTCGCTAGATTGTATGTTCATGTCAAATCCTATCCAGAATCTCGAAAATGCGGAACCCTAAAATTGATTTTTGGGTTTTTGTTTGTCTGAGACAGAGTTTGTTGTCTATATATATATTAAAAGGTTAAGATTCTAGAGTTCTCTCTAATTTTCAAAATTGAAGGATTATATAGTAGAAAGCAACCAAAATTTTGCTCCTTCTTAGGAAAATTCTCGGCTTCCCTCTCGAGTTTGATTCCGTTGATTTATGTTTTCTGGTGGTGATGTTCTTGTTTTACTGGATCATTTGATATTGCAGGGTGCAGCATTGCCTAAACTGCCTAGGAAAAGGATATGAAGTATGATGGACCTTGTAAGTTTCTCATATAGTAAGTGAAGTGATTTACCTTTGCATTGTATTAGTTCTTGGTGAGATTTTTCACTTGATTATCGTAATCTAATGGATGATCTAGCTCTAGTTGTATTTCATCGTAGTTTTAAATGTTAGGAATCACGACCTCTAGACTGGTATGATATTATCCACTTTGAGCATATGCTCTCATGGTTTTGCTTTTGCTTTTCCGAAAAGGTCTCATACCAATGGAGATGTATTCATTTTTTATAAACCTATGATCATCCCCTTAATTAGCCAATGTGGGACTCCCTCCCAACAATCCTCAACAATCCTCTCCTCGAACAAAGTACACTATAGAGCCTCCCGTGAGACATATGTAGCCCTCGAACAGCCTTCCCTTAATCGAGGCTCGATTCCTCTCTGGAGCCCTTGAATGAAGCATACCCTTTATTTGATACTTGAGTCACTTTTGACTACACCTTTGAGGTTAGTTCGACACTTGAGGATTCTATTAACATTACTAAGTTAAGGGCACGACTCTAATACCATATTAGGAATCACAACCTCCATAATGGTATTATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGGTTTTGCTTTTGCTTTTCCCAAAAGGCCTCAAACTAATGGAGATATATTCATTACTTATAAACCCATTATCATCCCCTTAGTTAGCCAATGTGGGACTCCTTCCCGACAATCCTCAACCGTTTATGCTTTTAACCATCATATACACTTCGCAAAAATGCAGTAAGAGATTTGACTAGACGTTAGGAATCACAACCTCTGTAATGGTATTATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTGGTTTCCCCAAAAAGGCCTCATACCAATGGAGACATATTCATTACTTATAAACCCATTATCATCCCCTTAATTAGCCAATGTGAGACTCTTTCCCGACCATCCTCAACCATTTATGCTTTTAACCATCATATACACTTGGCAATGCGGTAAGAGATTTGACTAGACGTTATGGGTTAAAAACTTGTATTTGTGTCCTTACTGAGATATTACGCATTAGACAGTTTTAGTTGTAAGAACATGTTAAGTGACCTGCCTGCTTTAAATATGAACATGTAGAGCTTGTTTTAAGTTCATTCTTTCATGTTTTTGCTGGAAAACTTGAATGTTTCAAAACAAATGCAATAAGTTGCTTTAATTATACTGCAAACGTCGATAGGGGACGACCAGTTTGACTCGATCTATCCCATGTAATGCAATTGCAGGTGTAAATTCCATCAGAAATCGATGAAAATACGAATGAACGATCGAAAGGTGTCTCTTTCAGCTGAAGAAAGGTCATTTCATTGCTTAAACTGCCATCCACACCTCAGTTATTTGCATATAAGGTTACTTGTGATTGTGAACTCTTTGAGATTGTTCATTCTTTCATGATTAAAGTATATGTTGGCAGAGCATTCACACTTCCATTGCTTGTTCTTCTTTTTAGTTTGGTGGGTGGAAAGTTAATCTGACAAGCTTGAATCATGTGATGGAATGGAAGAAGACAAGTTGTTTTTAGGTAGAAAAACATGTAAAATGGTCTCTATGATTTGATAACGGGATTAAGACGTTGAAATCACAATGA TTTTTATCTCTTCTATTTTATCTGGTTTCGGAGACTCTCTCACCTTCCTAGTTCACCAGAGAATGGTACCAAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCTTCGGCGGAATTTTCACTCTTAGGTTCGCTTCATTTCTCACTATCCAAACGCTCCGCCACACCGCCGAAGCCAAACGGAGAAAAATCGCTTTGCCCTGTAGGGCTTGTAGAGGAAAAGGATTCTATATTTGCAAATTATGCCGCGGAAATGCAGTCATTCAGTGGTCGCCATTGTCCGATCCTATTGCCATGAACCCCTGCGTGTGCCCGACTTGTGAAGGAAATAGGGTGCAGCATTGCCTAAACTGCCTAGGAAAAGGATATGAAGTATGATGGACCTTGTAAGTTTCTCATATAGTGTAAATTCCATCAGAAATCGATGAAAATACGAATGAACGATCGAAAGGTGTCTCTTTCAGCTGAAGAAAGGTCATTTCATTGCTTAAACTGCCATCCACACCTCAGTTATTTGCATATAAGGTTACTTGTGATTGTGAACTCTTTGAGATTGTTCATTCTTTCATGATTAAAGTATATGTTGGCAGAGCATTCACACTTCCATTGCTTGTTCTTCTTTTTAGTTTGGTGGGTGGAAAGTTAATCTGACAAGCTTGAATCATGTGATGGAATGGAAGAAGACAAGTTGTTTTTAGGTAGAAAAACATGTAAAATGGTCTCTATGATTTGATAACGGGATTAAGACGTTGAAATCACAATGA ATGGTACCAAGGCAATTGCGAACAATCTTCACCGGCGCCGCCGTCATCTTCGGCGGAATTTTCACTCTTAGGTTCGCTTCATTTCTCACTATCCAAACGCTCCGCCACACCGCCGAAGCCAAACGGAGAAAAATCGCTTTGCCCTGTAGGGCTTGTAGAGGAAAAGGATTCTATATTTGCAAATTATGCCGCGGAAATGCAGTCATTCAGTGGTCGCCATTGTCCGATCCTATTGCCATGAACCCCTGCGTGTGCCCGACTTGTGAAGGAAATAGGGTGCAGCATTGCCTAAACTGCCTAGGAAAAGGATATGAAGTATGA MVPRQLRTIFTGAAVIFGGIFTLRFASFLTIQTLRHTAEAKRRKIALPCRACRGKGFYICKLCRGNAVIQWSPLSDPIAMNPCVCPTCEGNRVQHCLNCLGKGYEV Homology
BLAST of Cp4.1LG07g11390 vs. NCBI nr
Match: KAG7021261.1 (hypothetical protein SDJN02_17949 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 226 bits (575), Expect = 1.33e-74 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. NCBI nr
Match: KAG6586407.1 (hypothetical protein SDJN03_19140, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224 bits (570), Expect = 2.52e-68 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. NCBI nr
Match: XP_008457839.1 (PREDICTED: uncharacterized protein LOC103497424 [Cucumis melo]) HSP 1 Score: 207 bits (527), Expect = 2.82e-67 Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. NCBI nr
Match: XP_022142951.1 (uncharacterized protein LOC111012944 [Momordica charantia]) HSP 1 Score: 207 bits (527), Expect = 2.82e-67 Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. NCBI nr
Match: XP_038889623.1 (uncharacterized protein LOC120079492 [Benincasa hispida]) HSP 1 Score: 206 bits (525), Expect = 5.68e-67 Identity = 96/106 (90.57%), Postives = 101/106 (95.28%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. ExPASy TrEMBL
Match: A0A6J1CNQ8 (uncharacterized protein LOC111012944 OS=Momordica charantia OX=3673 GN=LOC111012944 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 1.36e-67 Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. ExPASy TrEMBL
Match: A0A1S3C6K9 (uncharacterized protein LOC103497424 OS=Cucumis melo OX=3656 GN=LOC103497424 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 1.36e-67 Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. ExPASy TrEMBL
Match: A0A0A0LI05 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G006050 PE=4 SV=1) HSP 1 Score: 204 bits (520), Expect = 1.59e-66 Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. ExPASy TrEMBL
Match: A0A5D3BFD4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00060 PE=4 SV=1) HSP 1 Score: 178 bits (451), Expect = 6.66e-56 Identity = 85/92 (92.39%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. ExPASy TrEMBL
Match: A0A6P4BUI7 (uncharacterized protein LOC107435933 OS=Ziziphus jujuba OX=326968 GN=LOC107435933 PE=4 SV=1) HSP 1 Score: 177 bits (449), Expect = 1.04e-55 Identity = 78/105 (74.29%), Postives = 90/105 (85.71%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. TAIR 10
Match: AT5G20220.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04 Identity = 21/55 (38.18%), Postives = 26/55 (47.27%), Query Frame = 0
BLAST of Cp4.1LG07g11390 vs. TAIR 10
Match: AT5G20220.2 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 41.2 bits (95), Expect = 6.1e-04 Identity = 21/55 (38.18%), Postives = 26/55 (47.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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