Cp4.1LG07g10890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTCCTCCGACCCGCCTCCCTTATCTCCCTTCTTCTTCTCTCTCTTTCCCTCTTCTCCCATTCTTCCATCACCGCCATTCCCATCTCCGGTACTCATCTTTCATATTTTTTGTGAAAAAAAAAACTCCAATGTTGTTTAATCTGAGAATTTTCTTATCTGGGTTTTGTCTTAATGCAGAGAACTCTGGTGGGGTAGAGGTTTTTAAGGTCTCGGAGCCATGGAGGAGTCGGAGAAGCCTTGCGGAACAGAACCCTGCTGCGAACTCGTCTCTGATTTTGGCGAGGGAAAGAACTAACAGGACAGACCCCCTTGCAAATTTTAAACCATATACGGGTGGATGGAATATCGGCAACAAACATTATTGGGCTGTAAGTTCATTATCTCAATGGTTTCTATAAGTTGCAATGGATATGTAATATGTTAGGAACACGGCTCTCCACGATGGTATGATATAACTTTGAACATAAACTCTCATGATTTTTCTTTCGGTTTCTTCAAAAGGCCTCGTACTAATGAAAACGTATTCCTTCCTTATAAATCCATGATCATCTACTTAATTAGCCAATGTGGGACGACTCCCTCCCAACAATCCTCCCTCGAACAAAGTATACCATAGAGCCTCTCCTGAGACTTATGTAGCCCTCGAACGACCTCCCCTTAATTGAGGCTCGACTTCTTTCTCTAAAGCCCTCAAACAAAGTACACCCTTTGTTCAACATTTGGGTCAATTTTGACTATACCTTCGAGGCTCGCAACATCTTTGTTTGATATTAGAGGATTTTATTGACATGGCTAAGTCAAGGGCATAGCTCTANTCAAGGGCGTAGCTCTAATACCATGTTAAGAACTATGACTCTCCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTCATTTCTCCAAAAGGACTCATACCAATGTTAACGTATTCCTTACTTATAAATCCATGATTATCCACTTAATTAGCCAATGTTTTCATTTCTCCAAAAGGACTCATACCAATGTTAACGTATTCCTTACTTATAAATCCATGATTATCCACTTAATTAGCCAATGTGGGACTCCCTCCCAACCATCCTCAATCTGAAATACGATCTGTTGAAGTTTAATTCTTTGGCTAATTTGGTTTAGCTCGGTTTGGTTGTTAACTAAAGCTAAATATGAACATGGGTTCCTGTTTTTGGGTCCCATCTTCATTACTTCTCAAGTCCTTTGACAATATTATGTTAACCATGAAGCTTTCTGTCCTGTTTCAATCTGATGCAGTCTGTTGGTCTTACTGCTGCTCCCTTATTTGCCACTGCTATTGCCTGGTTCATGCTCTTTGCGATATGCTTGTTGATCATCTGTCTTTGTCGTTGCTGTTGTCCGAGGGAGCCTTATGGCTATTCTCGAACAGCCTATGCCTTCTCCCTTGCGTTCCTCGTATTCTTGACCATCCCAGTAACGTAAACATCTCTTTCCCTCCAAACTGCTGTCTAAATCTTTTTAATGCAGAGAACTCTGGTGGGGTAGAGGTTTTTAAGGTCTCGGAGCCATGGAGGAGTCGGAGAAGCCTTGCGGAACAGAACCCTGCTGCGAACTCGTCTCTGATTTTGGCGAGGGAAAGAACTAACAGGACAGACCCCCTTGCAAATTTTAAACCATATACGGGTGGATGGAATATCGGCAACAAACATTATTGGGCTGTAAGTTCATTATCTCAATGGTTTCTATAAGTTGCAATGGATATGTAATATGTTAGGAACACGGCTCTCCACGATGGTATGATATAACTTTGAACATAAACTCTCATGATTTTTCTTTCGGTTTCTTCAAAAGGCCTCGTACTAATGAAAACGTATTCCTTCCTTATAAATCCATGATCATCTACTTAATTAGCCAATGTGGGACGACTCCCTCCCAACAATCCTCCCTCGAACAAAGTATACCATAGAGCCTCTCCTGAGACTTATGTAGCCCTCGAACGACCTCCCCTTAATTGAGGCTCGACTTCTTTCTCTAAAGCCCTCAAACAAAGTACACCCTTTGTTCAACATTTGGGTCAATTTTGACTATACCTTCGAGGCTCGCAACATCTTTGTTTGATATTAGAGGATTTTATTGACATGGCTAAGTCAAGGGCATAGCTCTAATACCATGTTAAGAACTATGACTCTCCACAATGATATGATATTGTCCACTTTGAGCATAAGCTCTCGTCGCATTGCTTTTGGTTTCCCTATCTCATNCTCAACCTATGGAGATGTATTCTTTACTTATAAATTCATGATCAACCCCTCAATCAGCCGATGTGGGACTCCTCTCCCAACAATCCTCAACATACAATATACTCATCCTCGTAACTCGTAGGATATTCAATATGATAGGTAGTTAAATGGAGTTTGGATTCAATGGTGAAATGTTCTTATTTTGTTGAATGTTGTCTCTGTCAGCTGTCTGAATTGATCATGTTCTTTTCCTTGTATGCATTAGTGTGATTGGAGATACGTGTGTTGCGATGGAAGATTGGCTGCAGAATCCCACAGCCCACACAGCATTAGATGAGATTCTTCCTTGTGTCGAAAAGGCCACTGCCAAAGAAATTCAGACTGTAACCATGAATGTGAACTACCAGCTCGTCAGATTGGTCAATGGAGTGATCAACACACTCGCAAATGCCAACCCTCCTCCAGATGTCAAGCCCCCTATGAACTATAACCAATCTGGCCCGTCGGTGCCACCCCTTTGCGTTCCGTTCAATTCCGATCTCACCGACCGAAACTGCTCGGCTAATGAAGTAGAACCGAGCAAAGCTCCCAAGGTAAAGAATCTTCTATGTTAAAGCTATAGCTAAAACAAGGTAGCTTTTGAAACACTTACGACGACGACGTCAAAAACTATAACGTCCCAGATCCACCGCTAGGTGATATTGTCCTTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCATCTGCTAGGGGAAGGTTTCCATACCCTTATAAAGGGGGTTTTGTTCTCCTCCCCAAGTAATGTGAGATATCACAATCCACCCCCTTCGGGGCCCAGCGTTCTCGCTGGCACTCTTCCATCGATGTGGGACCCCCTCCAAATCCACCCCCTTTTGGGCCCAGCGTCCTTACTGGCACACCGTCTCGTGTCTACCCCCTTTGGGGAACAGCAGCCTCCTCGCTGGCACATAGTCCGGTGTCTGGCTCTAATACCATTTGTAACGGCCCAGATCCACCGCCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTTCCCTCAAAGTTTTAAAACGTGTCTGCTAGGGGAAGGTTTTCATATCCTTATAAAGGGTGTTTTGTTCTCCTCCCTAACCAATGTAGGACATCACAAAAACGACGCATTTTTGTTCGAATAACTCAACGGGATCTCGGATTGTTGCTTGCAGGTTTGGGGGGATTTCACTTGTCAAGTTTCAGGCAATGACATTTGCGCCACAACTGGCCGGTTGACCCCAACATTGTACAACCAAATGACATCTGCAGCAAGCGTGAGTTATGGTTTGTATCGGTTTGGACCGTTCTTTGTGGACCTCGTAGATTGTACATTTGTTCGTCAAGTGTTTATGGACATCAGTAAAAATCATTGCCCTGGCCTCCGACTGTTCATGGAATTGACATACGTTGGGTTGCTTATGATGTCTGGTTCTGTCATGCTCTCCCTGATCTTCTGGATTATATATGCAAGAGAGCGACGACATCGAGTCTATACTAAGCAATTTATTGCACGAACTCGCAGCTAG ATGTTCTTCCTCCGACCCGCCTCCCTTATCTCCCTTCTTCTTCTCTCTCTTTCCCTCTTCTCCCATTCTTCCATCACCGCCATTCCCATCTCCGAGAACTCTGGTGGGGTAGAGGTTTTTAAGTCTGTTGGTCTTACTGCTGCTCCCTTATTTGCCACTGCTATTGCCTGGTTCATGCTCTTTGCGATATGCTTGTTGATCATCTGTCTTTGTCGTTGCTGTTGTCCGAGGGAGCCTTATGGCTATTCTCGAACAGCCTATGCCTTCTCCCTTGCGTTCCTCGTATTCTTGACCATCCCAGTAACTGTGATTGGAGATACGTGTGTTGCGATGGAAGATTGGCTGCAGAATCCCACAGCCCACACAGCATTAGATGAGATTCTTCCTTGTGTCGAAAAGGCCACTGCCAAAGAAATTCAGACTGTAACCATGAATGTGAACTACCAGCTCGTCAGATTGGTCAATGGAGTGATCAACACACTCGCAAATGCCAACCCTCCTCCAGATGTCAAGCCCCCTATGAACTATAACCAATCTGGCCCGTCGGTGCCACCCCTTTGCGTTCCGTTCAATTCCGATCTCACCGACCGAAACTGCTCGGCTAATGAAGTAGAACCGAGCAAAGCTCCCAAGGTTTGGGGGGATTTCACTTGTCAAGTTTCAGGCAATGACATTTGCGCCACAACTGGCCGGTTGACCCCAACATTGTACAACCAAATGACATCTGCAGCAAGCGTGAGTTATGGTTTGTATCGGTTTGGACCGTTCTTTGTGGACCTCGTAGATTGTACATTTGTTCGTCAAGTGTTTATGGACATCAGTAAAAATCATTGCCCTGGCCTCCGACTGTTCATGGAATTGACATACGTTGGGTTGCTTATGATGTCTGGTTCTGTCATGCTCTCCCTGATCTTCTGGATTATATATGCAAGAGAGCGACGACATCGAGTCTATACTAAGCAATTTATTGCACGAACTCGCAGCTAG ATGTTCTTCCTCCGACCCGCCTCCCTTATCTCCCTTCTTCTTCTCTCTCTTTCCCTCTTCTCCCATTCTTCCATCACCGCCATTCCCATCTCCGAGAACTCTGGTGGGGTAGAGGTTTTTAAGTCTGTTGGTCTTACTGCTGCTCCCTTATTTGCCACTGCTATTGCCTGGTTCATGCTCTTTGCGATATGCTTGTTGATCATCTGTCTTTGTCGTTGCTGTTGTCCGAGGGAGCCTTATGGCTATTCTCGAACAGCCTATGCCTTCTCCCTTGCGTTCCTCGTATTCTTGACCATCCCAGTAACTGTGATTGGAGATACGTGTGTTGCGATGGAAGATTGGCTGCAGAATCCCACAGCCCACACAGCATTAGATGAGATTCTTCCTTGTGTCGAAAAGGCCACTGCCAAAGAAATTCAGACTGTAACCATGAATGTGAACTACCAGCTCGTCAGATTGGTCAATGGAGTGATCAACACACTCGCAAATGCCAACCCTCCTCCAGATGTCAAGCCCCCTATGAACTATAACCAATCTGGCCCGTCGGTGCCACCCCTTTGCGTTCCGTTCAATTCCGATCTCACCGACCGAAACTGCTCGGCTAATGAAGTAGAACCGAGCAAAGCTCCCAAGGTTTGGGGGGATTTCACTTGTCAAGTTTCAGGCAATGACATTTGCGCCACAACTGGCCGGTTGACCCCAACATTGTACAACCAAATGACATCTGCAGCAAGCGTGAGTTATGGTTTGTATCGGTTTGGACCGTTCTTTGTGGACCTCGTAGATTGTACATTTGTTCGTCAAGTGTTTATGGACATCAGTAAAAATCATTGCCCTGGCCTCCGACTGTTCATGGAATTGACATACGTTGGGTTGCTTATGATGTCTGGTTCTGTCATGCTCTCCCTGATCTTCTGGATTATATATGCAAGAGAGCGACGACATCGAGTCTATACTAAGCAATTTATTGCACGAACTCGCAGCTAG MFFLRPASLISLLLLSLSLFSHSSITAIPISENSGGVEVFKSVGLTAAPLFATAIAWFMLFAICLLIICLCRCCCPREPYGYSRTAYAFSLAFLVFLTIPVTVIGDTCVAMEDWLQNPTAHTALDEILPCVEKATAKEIQTVTMNVNYQLVRLVNGVINTLANANPPPDVKPPMNYNQSGPSVPPLCVPFNSDLTDRNCSANEVEPSKAPKVWGDFTCQVSGNDICATTGRLTPTLYNQMTSAASVSYGLYRFGPFFVDLVDCTFVRQVFMDISKNHCPGLRLFMELTYVGLLMMSGSVMLSLIFWIIYARERRHRVYTKQFIARTRS Homology
BLAST of Cp4.1LG07g10890 vs. NCBI nr
Match: XP_023538164.1 (uncharacterized protein LOC111799017 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 567 bits (1462), Expect = 4.60e-199 Identity = 328/533 (61.54%), Postives = 328/533 (61.54%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. NCBI nr
Match: KAG6586345.1 (hypothetical protein SDJN03_19078, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021191.1 hypothetical protein SDJN02_17879, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 555 bits (1429), Expect = 3.03e-194 Identity = 322/536 (60.07%), Postives = 325/536 (60.63%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. NCBI nr
Match: XP_022937963.1 (uncharacterized protein LOC111444194 [Cucurbita moschata]) HSP 1 Score: 553 bits (1425), Expect = 1.99e-193 Identity = 321/534 (60.11%), Postives = 325/534 (60.86%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. NCBI nr
Match: XP_022965662.1 (uncharacterized protein LOC111465492 [Cucurbita maxima]) HSP 1 Score: 545 bits (1403), Expect = 4.36e-190 Identity = 318/534 (59.55%), Postives = 323/534 (60.49%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. NCBI nr
Match: XP_023536965.1 (uncharacterized protein LOC111798192, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 466 bits (1199), Expect = 6.97e-164 Identity = 227/234 (97.01%), Postives = 230/234 (98.29%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. ExPASy TrEMBL
Match: A0A6J1FHI0 (uncharacterized protein LOC111444194 OS=Cucurbita moschata OX=3662 GN=LOC111444194 PE=4 SV=1) HSP 1 Score: 553 bits (1425), Expect = 9.62e-194 Identity = 321/534 (60.11%), Postives = 325/534 (60.86%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. ExPASy TrEMBL
Match: A0A6J1HKY1 (uncharacterized protein LOC111465492 OS=Cucurbita maxima OX=3661 GN=LOC111465492 PE=4 SV=1) HSP 1 Score: 545 bits (1403), Expect = 2.11e-190 Identity = 318/534 (59.55%), Postives = 323/534 (60.49%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. ExPASy TrEMBL
Match: A0A6J1G4G7 (uncharacterized protein LOC111450661 OS=Cucurbita moschata OX=3662 GN=LOC111450661 PE=4 SV=1) HSP 1 Score: 409 bits (1051), Expect = 2.98e-137 Identity = 244/527 (46.30%), Postives = 277/527 (52.56%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. ExPASy TrEMBL
Match: A0A6J1KF77 (uncharacterized protein LOC111493765 OS=Cucurbita maxima OX=3661 GN=LOC111493765 PE=4 SV=1) HSP 1 Score: 406 bits (1043), Expect = 4.83e-136 Identity = 243/527 (46.11%), Postives = 277/527 (52.56%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. ExPASy TrEMBL
Match: A0A0A0LFD9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G009430 PE=4 SV=1) HSP 1 Score: 394 bits (1012), Expect = 2.99e-131 Identity = 238/536 (44.40%), Postives = 271/536 (50.56%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. TAIR 10
Match: AT2G12400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25270.1); Has 177 Blast hits to 172 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 276.2 bits (705), Expect = 3.5e-74 Identity = 161/434 (37.10%), Postives = 204/434 (47.00%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. TAIR 10
Match: AT2G25270.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 233.8 bits (595), Expect = 2.0e-61 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 0
HSP 2 Score: 61.6 bits (148), Expect = 1.3e-09 Identity = 34/79 (43.04%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. TAIR 10
Match: AT1G80540.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G12400.1); Has 175 Blast hits to 171 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 184.5 bits (467), Expect = 1.4e-46 Identity = 97/233 (41.63%), Postives = 139/233 (59.66%), Query Frame = 0
HSP 2 Score: 60.8 bits (146), Expect = 2.3e-09 Identity = 31/64 (48.44%), Postives = 37/64 (57.81%), Query Frame = 0
BLAST of Cp4.1LG07g10890 vs. TAIR 10
Match: AT1G71110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G12400.1); Has 173 Blast hits to 169 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 165; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). ) HSP 1 Score: 176.0 bits (445), Expect = 4.9e-44 Identity = 91/225 (40.44%), Postives = 135/225 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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