Cp4.1LG07g10630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g10630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	oligouridylate-binding protein 1-like
Location	Cp4.1LG07: 9553790 .. 9563569 (+)
RNA-Seq Expression	Cp4.1LG07g10630
Synteny	Cp4.1LG07g10630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTGTCTGATACTCTGTATTGTGCTCTTCTTTCCTCTTTCTGCTCCCTCCTTCGAGGGTTTTTTTTTTCTTTTTCTTTTTTTCCCCCCTCTTCTCTCTTTTTTTTTTTTTTTTTCTCTTTTTCTTTGTTTTTTCATTTTCGTCCTAACACTCCCCACTTCAAGATCTTCGTCTCCTCCATTCAATCTCACTCTTCCTGGAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGCCCTCCTCGCTGCTCCTCAGGTTTCTATCTCTCTCTTTTACTTTTGTTTTTTTTTTTTCCTTTTTGTCGTTAAATTTGGTTGCAAGATATGTTCCTCTTCTGATCGATCCTTTATTTCTCAGTTTTTGATTACTCGAGCTTCAATCTTTCTCTCCCCACCTATTTTCTTGAAATCTGAATTCATTTTATCTATAAGCTGTAATATGTTTTTTCCTCAATTTAATGGAAAACGGGAAGGATTTCACTAGAGAACTAAAAGTTCAATATGTGATAAGATATCAATCTTGAAAAGGAGCCCTGTGGATTCAAAACAAATCCTCCAATTGGTTATAATCATGCCGACGAAAACATTTTCGCCAGGAGCTGTGCCAAGAAGAGTCTTGTACTGTGTAGTATCCCAATTGAACTCTTCCCAAGTGATGCGAAAAAGTGCGTGATTTCTTTTCAACCACAACTTCCATGGCACAAGATTTTATACATATGGTCACTGAGAAGCTTTTTTAGACCTCCTACCGAGGTCAAACGCCTGTAATAACACATACCAAAGCTCCTTTGTAGTTGGAAAATGAAGAAACGGTTGGCTTTGGGTCTTGGAGTTCTCTTAGCATAAAAGACAACACTTAGGATTGGAATTAAAAAATCATACATGATGTCCAGAGACTATATTTCTACCTAAATGAAAGAAGCACATGGACATTTGTCTAGTGTGAGTCGCCTTTTATCAAATCTAGTAACAATGTACTGTTTTCATGTTTTTTTTATGAGTTCGGTTTCCTCCCTTCCTATTTCACTTTGATTGGTCCATTTGTGCTCACATACATACATGATAACATTTGCATGTTAATGAGTAGATGACAATCAATTAACTAGTTTTCAAATATTACTCCTTTCTATTTTTTTCTTCAAACAAGGAACACGACTTTTCATTAATGCAATGATTAAAAGGTTAACTTCAAAGATACAAACTCCACGTGAGAGTGAACGAAATAATAATAATAATAATAATAATAACGAAAACAATACAAGACTGGAAGTAACTTAAATGCAACAATCCTCCTCTCTATTCTTCTTGTACAAATTGTTGCCATTATTAATCATTATGCGAGTCTTTGGAGCCATCCAGTATTCGTTCAGAAATATGATTGTTAATGTATCAGTATCATATTCATCTTTACATCCATGACAAGTCCTTGGAGATTTATTGCTGAAGCACGAGTCAATTGGAGTCTTTCTTCATCCCTGTACTTAGAACGTTACCCATTGTCTGTTGGTTGAATCTTTCAGTTACACTATTTCTACACGGGTGAGGAGCGCAGATATGTTTTTCTAGGAAGGTTCTGTTTTTCTTTTATCCTTTCTTGTTTTTTTACCTTTTTATTTTGCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTGAGTGTTAAATAGATATTTTATTTCCTTTTTCCATTTTTTCATTTAGTTCATTTTAAATTTTAGATAGTAAGATAAGTCTTTATTTGGAATACCTTGCACATTTTGCCTTCGATATAAGGTTCCTCCTTGGATTTGCCATTTGTTGATTGATCTCCATTGACACCACACCTTACCATGTTCATTGTTTGCTAAAACTTATATCATTCTGGTTCGTATGTTGTTTGAATGCATTCAAGTACACTGATTTCTATTACATCTTTTTTTGTTTTTAATTAGCCATCAATCTGAACTAATGAAAAAATATAGGTATGTCGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGGTGTGGTTTCCATTTAGACTATCATTTGGTGCTATACGAACTCTTTCCATTATGATAATAAGTACTTTACCATCGGTTATAACTTTTGAATTTTGTTGGACTGTTTCTTCCTTAAGTAACCAGTTGGTGGAATTATTGCAAATAATCCAGTGTTATCTCACAGATCAGGATCTTCTTGTTATTTCAAATAATCCAGTGTTGTCTCACAGATCAGGATCTTCTTTGAACGTGTTTTTTGTTATATAAATAGGTACTAATCTTCTACCTCAACTTTTCTTTCTATTTATGCAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTAGGTGAAATTCTTTCTTGCATTTTTATTGACATTAGCCGAGTCATATATTTCGATATAATTTCACACAGGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTTGTATGCTCAGATTGTTTCTTTTTCCTTTGATTCCGTTTCCAATTATGATGAGTTTGTAGCATGCGGCTGCTGACATTTTTATATGGTGTTTTTATGCAGGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGTAAGTTTGTTATCCAAATTTTTGTTATGAGTCAGTCTGCTTGGCTTATGTTCAAATGTTTGAGATGCGGTAGAGCTTAGCTTAATACTATTCAACTGAGAGCACCTTGCTCCAGCACCTCTAACCTTATTTTCCTTTAATACTTCAGGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGTTTTGGAATTATTTCAATATGATGTTTTTACCCCTTCCTGAGTCGCCCATCCTTTTGCTACCAATGTAGGAAGTCTTTTATTTGTTTTCTTCAGATTATGTTCATAATTGTACTTCTATTAATAATTATTTATTCTGCTTTCAGGATGCTCAAAGTGCAATTAATGACATAAATGGTATTCCTACTCTCTCTCTTGTTTGGAAATCTTATGTTGTATATTTATCTATTTGGTGTCTTGTTTAACCATATCTCTTGTCCTGAACCATGCAAGTAAAGAATGCAACGAATGGCATTATTGGGGAAATGAGAAACAGAGTTAAAATTATCTTACGAGAAATGAATATGGAAACTTGATGTGAAAACCCAAGGGAACTGGATATGAGAACCTCTTCCATTTAAGGTCCCCCAAAGATCATCCTTGAACCTCAATACAATTTGGATCAAGTCAAAAGGAAAAATTAGATTTATACCTTCAGGTCAATGATCAACGAGCAAGGATATATATATAGGGACACTTGAACACATAGAATTGACAAAAGGGTTTGGGAAAGGTTCTCGGCTCTTTAGAGTCGCTCAAACACTGAATTTATTTCATCGAAGTCTTAACTACAATGACCTGAATAAGGCATGTAAATAATCTTTAGGGAGGCAACAACCGAAGAAGGAAAACACTATAAGATCTCAAACAAACAAGGAAAAAAAATCCTACCAACCCAATAAGGCAAGAACTAAACTAATTAATGTGTGCTTTTAAACAATATCTCCCAAATAAATCTTAAACAAATGTCAAATATAAGAGTTAATACAAGGCTTAGATGACAAGCTAAAAAATAGTCTTAAACTAGGACGTTTCTATAGGCCTCCCGAAGCTCTTCCTATTGGATTATGTTCAAGTAGCTTGGGTTCTTTGGAAAAGATATCTTTGATGCAATCTTCGTAAGCTGTTTGAGCGTTAGAAAGAGAATTCAAATTGGCAATATAGGTTTGGATCTTATTTGGTTAATAGAGATAAATGTTCAGTTATCAGTATTAATTGCAACTAGTCTAATTGGAATGTTGGGCCGCTTGGGTGGGCTGTGAGGTGGGGTCATTCCCTTTCTCGTACTTAGGTTTCCCCCCTGGTCATAATTTTAGAAGCATTTATTTCTAGGATCTTGTGATGGAAAAGGTTTAGAAATGGTTATCTTCGTGGAAAATAAGTTTTCTCTCCAAGGGAGGAAGACTAACCCTTGCCATTTGGTCCTCAGTGGTTTCCCAGTCTATTTTCTTTCCTTGTTAGTCCCTGTGAACGTCTGCAATTCCTTGGTGCAACGCATGCGTGATTTTTTTTGTGAGAAGGGGTGGCGGAAGGGAAGGGTTCACATTTGGTTATTTGGGAGATGGTAGCTAGACCGGTGGAGTTTGAGGGTTTGGGTATAGGGAATCTTAGTGTGCACAATTAGGCCTTGTGGGTAAATGGTTAAGCCATTTCTCTCAAGATGTGGCATAAGCTTATTGTGGGTAACATCCTTTTGATTGGTCTTCGAAGGAGATTTCAAGAGGTACTGCCAAAAATCCATGGAAAACTATCTCTGATAGGTTTCCTTCGTTTCCTAGTTTGTTCATTGTTACGTGGTGACAGGCTGAACACTTATTTCATAAGATAATTGGCTAGGGGGTAGTTCCCTATGCTCGTTGTTTTCCTTGACTTACCATCTTTCCTCTTTGAAGTTTTGTTATGTGCTATATCCTCTCGTCTTTTGGGAGTTCTTCGTCTATTTCCCTTGGCCTTAGTTGGCCCTTTTCTAATAGAGAGTCGATTGATGCAGTGGCCCTTTTGGCCTTGCTTAGGTTTTTTGCCATTTAGATGAAGAGATGTTCGCTTTTGGAGCCTTGATTGAGCTCTCCCATTTTTCCTCTATTTTGGAAAATCAAAATTTCAAAGAAGGTTTATTTTTTTGTTTGTTAAATATTTCAAGGCAGGGTTATACTCTGGATCGTGCTTAGAGATTTTTGCCCAACTTGATTGGGCCTCAGTGTTGTATCCTTTGCAAGGAAGCAGTCGAGGACTTGGATCATGTCCTATGGTTATGGCAGTATGCTAGATCGATTTGGAGTGGTTTCTTTAGTTTTTTTTTTTTTGTCTGGTGGCCAAGGAGTTGTAAATCCATGTTGGAGGAGCTTTGTTACCACGTCCTCTCGTAAAAAGGGTTGCCTACTATGGCTTGTTTTCCTGGGTGCTATTGTTTGGTTTGGGGTCTTTGGGGGAAAAGTAATAATAGGATTTATAGAGGGTTGAGTGACCTTTAAGGTGACATTTGGTCCTCTCTTTGGGTCTCCGTTTGTAAGGACTCTTGTAATTTTTGTTTGTCAGAAGTCCTTTCTTTTTTCTTTTTTTTTTCTTTTTTTCTTTTTTTTTGTTGTTGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCTATGTTTTCTTTCATCTTTCTCAAATGAAAGTTGGACTTTTTACTAAAAAAAAAGGGAAAAAAAGAAAACTATTTAAATAGCTATTGGATTTCTTTTGTCAGACACGTGTAATAAAGTGTGCATGTCAGGTTCTACGTAATTTTATTAACCGGATATCATTGCTATGCTCTTTGGGGCTTGGATATTGTTGTTTCTTTTTATTGGGAACTGTTCTACATTTTTTTCTTCTTTTTTTGACGATAAAGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGGTATTTCATCTAGAAATGTATATGTATATATATGTTTTTATCATTCATCTAGAGATTTTTAGATTTAATAATCTTCCTAGAATTCTTTTATTTAGCTTTTCAAACTTTATAGTGATTGTTGCAAATCTTCTAACATTTCTATACGCTGATAGTTTTGGCTGTTGAATAGGGAGCCTTTACTTCTTGGTTTTCCAGGCCCGAGGTTATTTATGTTGATCTATACTTTCACTCTTAACCTTTGACTTGTTTCTTGCTAGTTCTTTCTCTAGTTCTATCTGGCTCGTGCATTCGAACACTTGGCCATAGTATATCTAATTAAACCTACATTTTTTCTGGATCTTGTCTAACAAGAGACATATCTTCATGAATGTCTTGACCTTCAGGTCTGTATCTTGCTTATCTACATTGAATAATCATTCCAAAATCAACTTAACATAATTTTTCTTCTAGAGGTTTGTGCCCATGGCAATTTGACCCTAGGCTTGTCATAAGGAAGCCATTGGATTTAACCTGACAGTTGGTGTTTAAATCCCTTAAATATTACCATGAAGAAATACATTTTAAATATTAAGTAGATGCAAGAGCTAATGAAGGATTAGTTCGAATGAAATGAATAATTTGATAGAATCAATTTAGCAATTGGAGAAAAAAGTATAAGAATAGTCAACTCCATAAGTTTGTGTAGCTTTTAGCAACAAGACGAGCTTTCAACCAAGTTACCGATCTGACTTTTTTGTGTCTCTAACTTTGTAATCCCTTAGATTTCTATTTGGTAATTTTGAAGGTTGTACTGTACTTAGTTTAAGTTTTGGGGGATTCTTTTTGTTATAATCTCTTTAGGAAGTTCGTAGTTTGTAACTTTTCTAATAACCATGAAATGTTTGTATTTCTTCTTGTTAAAAAAGACTTGGTAAATATAGTACAGATGATGAACTACATAAGACTGAGTTTATGTTACATAGAGAATTAACAAATCCACTTTTTGTCTCTAACTTCCTAATCCCAAGTTAAACAAAATTAACCTGGATTTAAACCACCTCTAAATTTTAAGTACCTTATGAATTTCTTAATTACCAATGTTGTTCTGATCTCTAATTTTGAGTGTTGAGTGTGACGAATAATTCAAAATTGATTAAATTTTCTGGTTAATTTTGATCAATCCAACACGTGTAGGAGTGAATAATTGAACCTACAATCTCTCTAAGGAAGTAGGGATGTCTCATCCATTGAGCTATGTGCACGTTAATCGACTTTTTGTTATTGATATATAATGAGTCCTTTTATATGGAATTGCGGTCAGTGAATGTTTTTCCTTAATCGGGCCTTTTATTTTCGCTATCACTGCTCTCAGAAAACTGCATCCCTTTGACGAGAGACATTTATATTTTTGCTTCATTAGTTTTAGTTTCACCATTTTGTCGCCTCTTTTTGCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGCAAGGAAATTCTTTTGATAATATAACAGTAACTAATATGTTAATAGTAGTTGTTGAAACAGCTAACTTGGGTGAACCTGCAACTGGATGGCTTGTCAAAGTTCTCTGCCATCTCTAAAAGCATAGGCATGATGGTGATGCGTTTCTAAAATTTATCTAAGAAAGTTTGGCTTGTATCTATTGTTGCTTCTTATATGGCCTTTTTGTGGATACTTGTATTCTTTTATTTATTTTTTGATGAAAGCATGATCTTCAGAATTTATATATCTAATGTGTCGTACAAGCAATCCTTCATTTCTCGATTAAAACCTGAATTAAAAACATGTCAGTTTTTTTATGTGATAGCATGATTATTTTATTATTGCATCATTTTCAGTGTTTATGACTCTTCAGGTTACTTCAGTTGATCTCCACCGTTATTTTCACACCCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGACAAAGGTTTTGGGTTTGTGAGATATGGCACTCATGCTGAAGCAGCTTTAGCCATTCAAATGGGCAATGCTCGAGTTGTCTGTGGCAAACCAATTAAGGTACAACCTTAATGAAAAATGTACAATTTTGTCCTACTTGAATGTTAATTAATCATCATTTGATCTAGTTCTCAGAGCCAATATATATTTCAACTTGGTTATTTCGGATGGACAATTTGTGTTGAGGGAAAGAAACTAACTGCGAAAATTAGTGCGGGTTAATGTTTTTGCGTGAGTGTTTAGGACTTGAATTTTCATTTATCCACTTAATGTTTTTGTAATCAAATGATGCAGTGTTCATGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTGCCCCTCTTCCACCACCAAATGTGGGACACATGCCAGGTCTGTCTGCCGCCGACCTTGCTGCCTATGAACGGCAAATGGCGTTGAGCAAAATGGGTGCCGCACGAGCGCTAATGCATCCGCAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATGGGAATTGGGATTGGTGGTGCTGGCACTAGTCAAACTTTATATGATAGTGGGTTCCAAAATATTGCAACCACCCAACAGCTGATGTATTACTAGGTGTATTTGAATTGCTGTATGATGCATGCTTGTAGTTGTTTTGTGGAACCAAAGAAAGTGTTGCGTTCTGGGGATTGTGATGCAAGTACTATAGCCTGGTGGTGGGGGGGTTTGATTGCAAAGTCATTTTAATTTGTTACTTTTACATTGTTGGTCTAGTTTGTAATATCCTGCTAGAAAAAAAAAATATGGTGCTACATCTGGAAATAAGCTCCAATCCTTCAATCTCCTTGGCTCTCTTCACATTTTTTTTTCCTGGAAGGATTAGTTCTTTGACTTCATATATTGATTGCTGAATATTGAATAGAGGATGTGAGAAGGATGAAAATAGATTATTGAATCTTTTGTTTTTGGCTGTTGGTTGTTACAGTGAGGTAATTGCAATTCACACCACATTTCTTTTCCTTCTTTTCCTAAACCATCCACTCAGATTACTAATTTGGATCACAGTTAAGGGGCAGCATAGATTGAAGCTCACCATCATATCTCAACCGGGGGATGTTGAGATATTTTGGAATATAAATGACATTTGTGTTGCAACTTACACGAACAAAGTGGGTAAAGCTGTGTTCACTTTCAAGCTTGGGTAGCTATCATATTGGTGCTCACACTAGCTTTAAACTAAATCAACTCCCTGATATGCTTCAGGCCGTCTAGCCTGCACTCATGAACACAGCATGCATGTCAGTCTCCGGTATCTTTGACATTTACCTGAGTTTCTACTTCCCAAAGCCCTCACCTCAGGAGCTGGTCGAAACCTTTTTCGAACGTTCCAACAAATTTTAATCAAGAATAGCAAACCCAGATGCCAGGAGACATGATGATCAGTTATACACCGAGCTCCAAAAACCTCATCAATTGAACGAGGCAGCCGAGTTGTCATCATACTGCCCTCTCCATGCGTTTCCACTATCCGTCCCGCTGCAAGCTTGATTGGGAGCCTGAATGTGACCCAAATTTCCATTTAAACTCATCTGCTGTACTTCAGATGATGATAGGATCTTTATGCTCTGAACACAGCTCACAAACTCCCTGTGCAATCAGTTGGTAAATGGAGTATTAAGACAAGAAAAGGCAGCGGGAAAAGATTTAAAATATTATACTAATTTATACTTACTCCCAAGGATCATCGCCAACTAGAAGTATATCATTTTCATGATCCACATAAACAAGTTTCCAATCAGTTCGTTGAGGATCTTCTAACTGCCCTTCAATACCAAACATTCGGGCAAGATCATGCCTAAGCTCGTCATATCCTTTGTAACGAGTGACATCGATGCATCTACCCACTGATCCACGCTTTTGAACCTTC

mRNA sequence

TATTTGTCTGATACTCTGTATTGTGCTCTTCTTTCCTCTTTCTGCTCCCTCCTTCGAGGGTTTTTTTTTTCTTTTTCTTTTTTTCCCCCCTCTTCTCTCTTTTTTTTTTTTTTTTTCTCTTTTTCTTTGTTTTTTCATTTTCGTCCTAACACTCCCCACTTCAAGATCTTCGTCTCCTCCATTCAATCTCACTCTTCCTGGAAGATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGCCCTCCTCGCTGCTCCTCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTATGTCGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTTGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGATGCTCAAAGTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGCAAGGAAATTCTTTTGATAATATAACAGTAACTAATATGTTAATAGTAGTTGTTGAAACAGCTAACTTGGGTGAACCTGCAACTGGATGGCTTGTCAAAGTTCTCTGCCATCTCTAAAAGCATAGGCATGATGGTGATGCGTTTCTAAAATTTATCTAAGAAAGTTTGGCTTGTATCTATTGTTGCTTCTTATATGGCCTTTTTGTGGATACTTGTATTCTTTTATTTATTTTTTGATGAAAGCATGATCTTCAGAATTTATATATCTAATGTGTCGTACAAGCAATCCTTCATTTCTCGATTAAAACCTGAATTAAAAACATGTCAGTTTTTTTATGTGATAGCATGATTATTTTATTATTGCATCATTTTCAGTGTTTATGACTCTTCAGGTTACTTCAGTTGATCTCCACCGTTATTTTCACACCCTTGGTGCCGGGACAATTGAAGATGTTAGGGTACAACGGGACAAAGGTTTTGGGTTTGTGAGATATGGCACTCATGCTGAAGCAGCTTTAGCCATTCAAATGGGCAATGCTCGAGTTGTCTGTGGCAAACCAATTAAGTGTTCATGGGGTAGCAAGCCAACCCCGCCAGGGACTAATTCTGCCCCTCTTCCACCACCAAATGTGGGACACATGCCAGGTCTGTCTGCCGCCGACCTTGCTGCCTATGAACGGCAAATGGCGTTGAGCAAAATGGGTGCCGCACGAGCGCTAATGCATCCGCAGGCGGCTCAGCATGCCCTCAAGCAGGCAGCCATGGGAATGGGGATGGGAATTGGGATTGGTGGTGCTGGCACTAGTCAAACTTTATATGATAGTGGGTTCCAAAATATTGCAACCACCCAACAGCTGATGTATTACTAGGTGTATTTGAATTGCTGTATGATGCATGCTTGTAGTTGTTTTGTGGAACCAAAGAAAGTGTTGCGTTCTGGGGATTGTGATGCAAGTACTATAGCCTGGTGGTGGGGGGGTTTGATTGCAAAGTCATTTTAATTTGTTACTTTTACATTGTTGGTCTAGTTTGTAATATCCTGCTAGAAAAAAAAAATATGGTGCTACATCTGGAAATAAGCTCCAATCCTTCAATCTCCTTGGCTCTCTTCACATTTTTTTTTCCTGGAAGGATTAGTTCTTTGACTTCATATATTGATTGCTGAATATTGAATAGAGGATGTGAGAAGGATGAAAATAGATTATTGAATCTTTTGTTTTTGGCTGTTGGTTGTTACAGTGAGGTAATTGCAATTCACACCACATTTCTTTTCCTTCTTTTCCTAAACCATCCACTCAGATTACTAATTTGGATCACAGTTAAGGGGCAGCATAGATTGAAGCTCACCATCATATCTCAACCGGGGGATGTTGAGATATTTTGGAATATAAATGACATTTGTGTTGCAACTTACACGAACAAAGTGGGTAAAGCTGTGTTCACTTTCAAGCTTGGGTAGCTATCATATTGGTGCTCACACTAGCTTTAAACTAAATCAACTCCCTGATATGCTTCAGGCCGTCTAGCCTGCACTCATGAACACAGCATGCATGTCAGTCTCCGGTATCTTTGACATTTACCTGAGTTTCTACTTCCCAAAGCCCTCACCTCAGGAGCTGGTCGAAACCTTTTTCGAACGTTCCAACAAATTTTAATCAAGAATAGCAAACCCAGATGCCAGGAGACATGATGATCAGTTATACACCGAGCTCCAAAAACCTCATCAATTGAACGAGGCAGCCGAGTTGTCATCATACTGCCCTCTCCATGCGTTTCCACTATCCGTCCCGCTGCAAGCTTGATTGGGAGCCTGAATGTGACCCAAATTTCCATTTAAACTCATCTGCTGTACTTCAGATGATGATAGGATCTTTATGCTCTGAACACAGCTCACAAACTCCCTGTGCAATCAGTTGGTAAATGGAGTATTAAGACAAGAAAAGGCAGCGGGAAAAGATTTAAAATATTATACTAATTTATACTTACTCCCAAGGATCATCGCCAACTAGAAGTATATCATTTTCATGATCCACATAAACAAGTTTCCAATCAGTTCGTTGAGGATCTTCTAACTGCCCTTCAATACCAAACATTCGGGCAAGATCATGCCTAAGCTCGTCATATCCTTTGTAACGAGTGACATCGATGCATCTACCCACTGATCCACGCTTTTGAACCTTC

Coding sequence (CDS)

ATGCAGTATCAGAGGCTTAGACAGCAGGCAATGATGCAGCAGTCTTTGTATCCCCACCCCGCCCTCCTCGCTGCTCCTCAGATAGAGCCCATCTTGAGTGGAAACCTGCCTCCTGGCTTTGATTCAAGTGCATGCCGCAGTGTGTATGTCGGGAACATTCATCCCCAAGTCACCGAGCCTCTTCTTCAAGAAGTTTTCTCAAGTATTGGACCCATTGAAGGATGTAAGCTCATTAGGAAAGAGAAGTCATCCTATGGTTTTGTGGACTACTTTGATCGCAGATCAGCTGCAGTTGCTATTATTTCTCTCAATGGAAGAAACTTGTTTGGACAACCTATAAAGGTTAATTGGGCATATGCAAGTAGTCAGAGAGAAGACACATCTGGTTGTCATTTTAATATATTTGTTGGTGATCTTAGCCCTGAGGTTACTGATGCTACGTTGTTTGCATGCTTTTCTGTTTATCCCAGTTGTTCGGATGCAAGGGTTATGTGGGACCAGAAAACTGGACGGTCGAGGGGATATGGTTTTGTTGCTTTTCGGAATGAACAGGATGCTCAAAGTGCAATTAATGACATAAATGGAAAGTGGCTTGGGAGTCGACAGATTAGGTGTAATTGGGCTACAAAAGGTGCTAGCTCGGGCGATGACAAACAGAGTTCAGATTCCAGAAGTGTTGTAGAGCTTACAACTGGGACTTCAGAGGGTGGCCAAGAGAAATCCAATGAGGAGGCACCTGAGAACAATCCTCAATACACAACCGTATATGTGGGAAATCTTGCTCCGGAGGCAAGGAAATTCTTTTGA

Protein sequence

MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYASSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKSNEEAPENNPQYTTVYVGNLAPEARKFF

Homology

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 6.5e-124
Identity = 223/267 (83.52%), Postives = 247/267 (92.51%), Query Frame = 0


Query: 1   MQYQRLR---QQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQV 60
           MQ QRL+   QQA+MQQSLY HP LLA PQIEPILSGNLPPGFDSS CRSVYVGNIHPQV
Sbjct: 2   MQQQRLKQQQQQALMQQSLY-HPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQV 61

Query: 61  TEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNW 120
           TEPLLQEVF+S GP+EGCKLIRK+KSSYGFVDYFDRRSAA+AI++LNGR+LFGQPIKVNW
Sbjct: 62  TEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNW 121

Query: 121 AYASSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGF 180
           AYAS+QREDTS  H+NIFVGDLSPEVTDATLFACFSVY SCSDARVMWDQKTGRSRG+GF
Sbjct: 122 AYASAQREDTSN-HYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGF 181

Query: 181 VAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGG 240
           V+FRN+Q+AQSAIND+NGKWLGSRQIRCNWA KGA +  + Q+SD++SVVELT+GTS+ G
Sbjct: 182 VSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGAVGE-QNSDAKSVVELTSGTSDDG 241

Query: 241 QEK-SNEEAPENNPQYTTVYVGNLAPE 264
           QEK  NE+APENNPQYTTVYVGNLAPE
Sbjct: 242 QEKVVNEDAPENNPQYTTVYVGNLAPE 265

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.5e-120
Identity = 212/262 (80.92%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 61
           Q Q + QQA+MQQ    HP LLA PQIEPI SGNLPPGFD S CRSVYVGNIH QVTEPL
Sbjct: 10  QQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPL 69

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 121
           LQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA +AI+SLNGR+LFGQPIKVNWAYAS
Sbjct: 70  LQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYAS 129

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 130 GQREDTSS-HFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFR 189

Query: 182 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 241
           N+QDAQ+AI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELT+G SE G++ +
Sbjct: 190 NQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTT 249

Query: 242 NEEAPENNPQYTTVYVGNLAPE 264
           N EAPENN QYTTVYVGNLAPE
Sbjct: 250 NGEAPENNAQYTTVYVGNLAPE 270

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 1.3e-116
Identity = 204/262 (77.86%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 61
           Q   ++QQA+MQQ    HP +LA PQ+EP+ SGNLPPGFD S CRSVYVGNIH QVTEPL
Sbjct: 15  QQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 74

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 121
           LQE+F+S GP+E  KLIRK+KSSYGFV YFDRRSAA+AI+SLNGR+LFGQPIKVNWAYA+
Sbjct: 75  LQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYAT 134

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDATL+  FSV+ SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 135 GQREDTSS-HFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFR 194

Query: 182 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 241
           N+QDAQ+AIN++NGKWL SRQIRCNWATKGA+SGDDK SSD +SVVELTTG+SE G+E  
Sbjct: 195 NQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETL 254

Query: 242 NEEAPENNPQYTTVYVGNLAPE 264
           NEE PENN Q+TTVYVGNLAPE
Sbjct: 255 NEETPENNSQFTTVYVGNLAPE 275

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.7e-112
Identity = 197/262 (75.19%), Postives = 230/262 (87.79%), Query Frame = 0


Query: 4   QRLRQQAMMQQ--SLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 63
           Q + QQAMMQQ  SLY HP ++A PQ+EP+ SGNLPPGFD + CRSVY GNIH QVTE L
Sbjct: 20  QAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEIL 79

Query: 64  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 123
           LQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A++AI++LNGR++FGQP+KVNWAYA+
Sbjct: 80  LQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYAT 139

Query: 124 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 183
            QREDTS  HFNIFVGDLSPEVTDA LF  FS + SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 140 GQREDTSS-HFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFR 199

Query: 184 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 243
           N+QDAQ+AIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT G+SE G+E S
Sbjct: 200 NQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELS 259

Query: 244 NEEAPENNPQYTTVYVGNLAPE 264
           NE+APENNPQ+TTVYVGNL+PE
Sbjct: 260 NEDAPENNPQFTTVYVGNLSPE 279

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.4e-96
Identity = 179/275 (65.09%), Postives = 214/275 (77.82%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPALLAA-----PQIEPILSGNLPPGFDSSACRSVYVGNIHPQ 61
           Q   L QQA+ QQ  Y    L AA      Q+EPI +GNLPPGFD S CRSVYVGN+HP 
Sbjct: 24  QQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISNGNLPPGFDPSTCRSVYVGNVHPN 83

Query: 62  VTEPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVN 121
           VTE LL EVF S G +E CKLIRKEKSS+GFVDY+DRRSAA+AI++L+GR++ GQ IKVN
Sbjct: 84  VTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGRHICGQAIKVN 143

Query: 122 WAYASSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYG 181
           WAYAS+QREDTSG HF+IFVGDLS EV DATL+ACFS YPSCSDARVMWD KTGRSRGYG
Sbjct: 144 WAYASTQREDTSG-HFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDNKTGRSRGYG 203

Query: 182 FVAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTS-- 241
           FV+FRN+Q+A++AI ++ GKWLGSRQIRCNWATK  ++ ++KQ +D+ + V LT G+S  
Sbjct: 204 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK--NNAEEKQETDNHNAVVLTNGSSSN 263

Query: 242 ---EGGQEKSNEEAPENNPQYTTVYVGNLAPEARK 267
              E  Q+  ++E PENNP  TTVYVGNL  E  +
Sbjct: 264 PGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNR 295

[Close]

BLAST of Cp4.1LG07g10630 vs. NCBI nr
Match: XP_023538357.1 (oligouridylate-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521 bits (1343), Expect = 5.62e-184
Identity = 262/263 (99.62%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. NCBI nr
Match: XP_022965399.1 (oligouridylate-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 520 bits (1339), Expect = 2.28e-183
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. NCBI nr
Match: XP_022937527.1 (oligouridylate-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 520 bits (1339), Expect = 2.28e-183
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. NCBI nr
Match: KAG7021360.1 (Oligouridylate-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 520 bits (1339), Expect = 7.83e-183
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 36  MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 95

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 96  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 155

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 156 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 215

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 216 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 275

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 276 SNEEAPENNPQYTTVYVGNLAPE 297

[Close]

BLAST of Cp4.1LG07g10630 vs. NCBI nr
Match: KAG6586503.1 (Oligouridylate-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 520 bits (1339), Expect = 2.08e-182
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy TrEMBL
Match: A0A6J1HQW3 (oligouridylate-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111465315 PE=4 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 1.10e-183
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy TrEMBL
Match: A0A6J1FBG1 (oligouridylate-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443912 PE=4 SV=1)

HSP 1 Score: 520 bits (1339), Expect = 1.10e-183
Identity = 261/263 (99.24%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy TrEMBL
Match: A0A6J1DM61 (oligouridylate-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021846 PE=4 SV=1)

HSP 1 Score: 517 bits (1332), Expect = 1.28e-182
Identity = 259/263 (98.48%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELTTGTSEGGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTTGTSEGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNEEAPENNPQYTTVYVGNLAPE
Sbjct: 241 SNEEAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy TrEMBL
Match: A0A5D3CHT1 (Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001510 PE=4 SV=1)

HSP 1 Score: 512 bits (1319), Expect = 1.22e-180
Identity = 255/263 (96.96%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELT+GTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNE+APENNPQYTTVYVGNLAPE
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. ExPASy TrEMBL
Match: A0A0A0LFH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000020 PE=4 SV=1)

HSP 1 Score: 512 bits (1319), Expect = 1.22e-180
Identity = 255/263 (96.96%), Postives = 260/263 (98.86%), Query Frame = 0


Query: 1   MQYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEP 60
           MQYQRLRQQAMMQQSLYPHP LLAAPQIEPILSGNLPPGFDSS CRSVYVGNIHPQVTEP
Sbjct: 1   MQYQRLRQQAMMQQSLYPHPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEP 60

Query: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYA 120
           LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAV+IISLNGRNLFGQPIKVNWAYA
Sbjct: 61  LLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYA 120

Query: 121 SSQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180
           SSQREDTSG HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF
Sbjct: 121 SSQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAF 180

Query: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEK 240
           RNEQDAQSAINDINGKWLGSRQIRCNWATKGA+SGDDKQSSDSRSVVELT+GTS+GGQEK
Sbjct: 181 RNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEK 240

Query: 241 SNEEAPENNPQYTTVYVGNLAPE 263
           SNE+APENNPQYTTVYVGNLAPE
Sbjct: 241 SNEDAPENNPQYTTVYVGNLAPE 262

[Close]

BLAST of Cp4.1LG07g10630 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 433.7 bits (1114), Expect = 1.1e-121
Identity = 212/262 (80.92%), Postives = 233/262 (88.93%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 61
           Q Q + QQA+MQQ    HP LLA PQIEPI SGNLPPGFD S CRSVYVGNIH QVTEPL
Sbjct: 10  QQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPL 69

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 121
           LQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA +AI+SLNGR+LFGQPIKVNWAYAS
Sbjct: 70  LQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYAS 129

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 130 GQREDTSS-HFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFR 189

Query: 182 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 241
           N+QDAQ+AI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELT+G SE G++ +
Sbjct: 190 NQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTT 249

Query: 242 NEEAPENNPQYTTVYVGNLAPE 264
           N EAPENN QYTTVYVGNLAPE
Sbjct: 250 NGEAPENNAQYTTVYVGNLAPE 270

[Close]

BLAST of Cp4.1LG07g10630 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 425.6 bits (1093), Expect = 2.9e-119
Identity = 210/262 (80.15%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 61
           Q Q + QQA+MQQ    HP LLA PQIEPI SGNLPPGFD S CRSVYVGNIH QVTEPL
Sbjct: 10  QQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPL 69

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 121
           LQEVF+  GP+E CKLIRKEKSSYGFV YFDRRSA +AI+SLNGR+LFGQPIKVNWAYAS
Sbjct: 70  LQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYAS 129

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDA LF CFSVYP+CSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 130 GQREDTSS-HFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFR 189

Query: 182 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 241
           N+QDAQ+AI++I GKWLGSRQIRCNWATKGA+SG+DKQSSDS+SVVELT+G    G++ +
Sbjct: 190 NQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG---DGKDTT 249

Query: 242 NEEAPENNPQYTTVYVGNLAPE 264
           N EAPENN QYTTVYVGNLAPE
Sbjct: 250 NGEAPENNAQYTTVYVGNLAPE 267

[Close]

BLAST of Cp4.1LG07g10630 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 420.6 bits (1080), Expect = 9.3e-118
Identity = 204/262 (77.86%), Postives = 231/262 (88.17%), Query Frame = 0


Query: 2   QYQRLRQQAMMQQSLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 61
           Q   ++QQA+MQQ    HP +LA PQ+EP+ SGNLPPGFD S CRSVYVGNIH QVTEPL
Sbjct: 15  QQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPL 74

Query: 62  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 121
           LQE+F+S GP+E  KLIRK+KSSYGFV YFDRRSAA+AI+SLNGR+LFGQPIKVNWAYA+
Sbjct: 75  LQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYAT 134

Query: 122 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 181
            QREDTS  HFNIFVGDLSPEVTDATL+  FSV+ SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 135 GQREDTSS-HFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFR 194

Query: 182 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 241
           N+QDAQ+AIN++NGKWL SRQIRCNWATKGA+SGDDK SSD +SVVELTTG+SE G+E  
Sbjct: 195 NQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETL 254

Query: 242 NEEAPENNPQYTTVYVGNLAPE 264
           NEE PENN Q+TTVYVGNLAPE
Sbjct: 255 NEETPENNSQFTTVYVGNLAPE 275

[Close]

BLAST of Cp4.1LG07g10630 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 405.2 bits (1040), Expect = 4.0e-113
Identity = 197/262 (75.19%), Postives = 230/262 (87.79%), Query Frame = 0


Query: 4   QRLRQQAMMQQ--SLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 63
           Q + QQAMMQQ  SLY HP ++A PQ+EP+ SGNLPPGFD + CRSVY GNIH QVTE L
Sbjct: 20  QAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEIL 79

Query: 64  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 123
           LQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A++AI++LNGR++FGQP+KVNWAYA+
Sbjct: 80  LQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYAT 139

Query: 124 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFR 183
            QREDTS  HFNIFVGDLSPEVTDA LF  FS + SCSDARVMWDQKTGRSRG+GFV+FR
Sbjct: 140 GQREDTSS-HFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFR 199

Query: 184 NEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGGQEKS 243
           N+QDAQ+AIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT G+SE G+E S
Sbjct: 200 NQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELS 259

Query: 244 NEEAPENNPQYTTVYVGNLAPE 264
           NE+APENNPQ+TTVYVGNL+PE
Sbjct: 260 NEDAPENNPQFTTVYVGNLSPE 279

[Close]

BLAST of Cp4.1LG07g10630 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 399.4 bits (1025), Expect = 2.2e-111
Identity = 197/266 (74.06%), Postives = 230/266 (86.47%), Query Frame = 0


Query: 4   QRLRQQAMMQQ--SLYPHPALLAAPQIEPILSGNLPPGFDSSACRSVYVGNIHPQVTEPL 63
           Q + QQAMMQQ  SLY HP ++A PQ+EP+ SGNLPPGFD + CRSVY GNIH QVTE L
Sbjct: 20  QAMIQQAMMQQHPSLY-HPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEIL 79

Query: 64  LQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVAIISLNGRNLFGQPIKVNWAYAS 123
           LQE+F+S GPIE CKLIRK+KSSYGFV YFDRR A++AI++LNGR++FGQP+KVNWAYA+
Sbjct: 80  LQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYAT 139

Query: 124 SQREDTSGCHFNIFVGDLSPEVTDATLFACFSVYPSCS----DARVMWDQKTGRSRGYGF 183
            QREDTS  HFNIFVGDLSPEVTDA LF  FS + SCS    DARVMWDQKTGRSRG+GF
Sbjct: 140 GQREDTSS-HFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGF 199

Query: 184 VAFRNEQDAQSAINDINGKWLGSRQIRCNWATKGASSGDDKQSSDSRSVVELTTGTSEGG 243
           V+FRN+QDAQ+AIN++NGKW+ SRQIRCNWATKGA+ G+DK SSD +SVVELT G+SE G
Sbjct: 200 VSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDG 259

Query: 244 QEKSNEEAPENNPQYTTVYVGNLAPE 264
           +E SNE+APENNPQ+TTVYVGNL+PE
Sbjct: 260 RELSNEDAPENNPQFTTVYVGNLSPE 283

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g10630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M427	6.5e-124	83.52	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q9LQI9	1.5e-120	80.92	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	1.3e-116	77.86	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9SYG4	5.7e-112	75.19	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q6YZW2	4.4e-96	65.09	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of Cp4.1LG07g10630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538357.1	5.62e-184	99.62	oligouridylate-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022965399.1	2.28e-183	99.24	oligouridylate-binding protein 1-like [Cucurbita maxima]	[more]
XP_022937527.1	2.28e-183	99.24	oligouridylate-binding protein 1-like [Cucurbita moschata]	[more]
KAG7021360.1	7.83e-183	99.24	Oligouridylate-binding protein 1, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6586503.1	2.08e-182	99.24	Oligouridylate-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Cp4.1LG07g10630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQW3	1.10e-183	99.24	oligouridylate-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC11146531...	[more]
A0A6J1FBG1	1.10e-183	99.24	oligouridylate-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443...	[more]
A0A6J1DM61	1.28e-182	98.48	oligouridylate-binding protein 1-like isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A5D3CHT1	1.22e-180	96.96	Oligouridylate-binding protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LFH4	1.22e-180	96.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000020 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g10630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	1.1e-121	80.92	oligouridylate binding protein 1B	[more]
AT1G17370.2	2.9e-119	80.15	oligouridylate binding protein 1B	[more]
AT3G14100.1	9.3e-118	77.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.1	4.0e-113	75.19	oligouridylate-binding protein 1A	[more]
AT1G54080.2	2.2e-111	74.06	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 133..206 e-value: 4.9E-5 score: 32.7
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 47..116 e-value: 2.7E-18 score: 76.8 coord: 133..206 e-value: 1.4E-23 score: 94.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 48..114 e-value: 2.0E-15 score: 56.4 coord: 134..204 e-value: 3.0E-18 score: 65.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 132..210 score: 17.233515
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 46..120 score: 15.732639
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 129..225 e-value: 1.8E-26 score: 94.7 coord: 1..128 e-value: 9.0E-23 score: 82.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..253
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 4..264
None	No IPR available	PANTHER	PTHR47640:SF40	NUCLEOLYSIN TIAR-LIKE PROTEIN	coord: 4..264
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 48..118 e-value: 9.12237E-40 score: 130.886
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 133..207 e-value: 1.07533E-52 score: 164.218
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 131..221
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 35..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g10630.1	Cp4.1LG07g10630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding