Cp4.1LG07g10430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g10430
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L31-like
LocationCp4.1LG07: 9405234 .. 9406977 (+)
RNA-Seq ExpressionCp4.1LG07g10430
SyntenyCp4.1LG07g10430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGACGAAAGCCCATGTTTTGAAAGCGTAGCCCAATAATGCCTTATAAAACCTAGCCTATTTTGGGGCCCAAACTCGACGAAACGATTGTGGGTAAATTTTGATACGGCTTATTCACAAAATCCATGGACCAAACCTCTATATAAATTTCAGATTAGGGTTTTTTTTGTGCTCTCGAAGATCATCTCTTTCGTTGGAGGCCACTTTTCGCGCCGATCGCCAGGTCTTACTCTAAACCCTGAAGATGTCTCCTCAGTTGCTTAATTCTTTGTTTCCGCTTGTCTTAAACTTTGGACGTTTGAAATCGGCAACAGTTATCCTTTTCATTTCATTTTTGGTTTTGCTGAGATCTCCGATGCTTATGAATCCGATGCCTATAGTGCAGTTCTGATCACAAGTTTATCGTCTACAGGTGTTTTAGTTGAGATTTAAAATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTAGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGGTACGTTCATTTTAGCCGCCCTTCTAAGTTCTAAGAATTCATCTAGATTTTATTGGATTGGTATTAGTTCAGTGTTTATTTCCGACTATCGATTGCAATGTGAGGTTTGAGATTTAGGTATTGGCTGAGGAAAGGATAACTTATATGTTACAACCATTGTCTTGTTAGTTTCTTCTTGAATTCGTTCCCATGATGTGCATTTCTCTGACTGCCTCATTGCTATATTTAGAGACATAGAGCATGGTTGGGGGATTGGTTTTGATACCATTTGTTCATGTTAGAGAACTAACATGAATTTCCATTTAATTTGTTTGTTACTCATCAGCCCTTGCTGCTTGTGAAATGAACAGCACCTTTAAGAAGAAGGCCCCAAAGGCCATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGGAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTTACCGTTTCAGAAATCTCTGCTGACGGACTGAAGGGACTCGGGACCAAAGTCATTGAGGAAGATGATTGAATTGTCTTTGTTTTTGTTTTCAAGATGAGATCAGGTTGTAGTTTTGATCTGTTTAATGGAAGGAGACGATCATATTTAATTGAAGTTACCTATTAACTTACCTTACCGTTCCTGGTCTTATAAACTATTGAATTCAAATGTTTTGGGTTACTACACTGAGCCTTCTAGTTATTAGTGGAAGAGAGCTTATTTGGTATGTGAAAAGTCATTAGGGTATTATTGGATGATGTAAGAGAAAGAATTTGATCATCATAAACCTTCAAGGATCTCTGTAGGGAACAAATTTTTTGCTGTTGAATCAAACAATGTTTCATATTTAAACTAATCCTTTCAAGGCTACACTGAAAATAACAAAAAAAAAAGAAATGGGATGGTCAAAGATCCTAAATTTCAAGTAGGGTACATAAGAATTTAAAATTAAAGGAAAAAAAAGTTGTAATAGTGGAAGAATGAAAACCCTTATAAGCCATTGATTCACTTCCTCTTCTTCACACCAGACTTGGAAATTAAATGGGATGGTCAAAGATCCTATGAACTGCGCTTAGTTTTGCAAGGGCAGCGTTCTTCAAGTCTGGGCGGTAGTAATTGTCAGCCACCTG

mRNA sequence

TGGACGAAAGCCCATGTTTTGAAAGCGTAGCCCAATAATGCCTTATAAAACCTAGCCTATTTTGGGGCCCAAACTCGACGAAACGATTGTGGGTAAATTTTGATACGGCTTATTCACAAAATCCATGGACCAAACCTCTATATAAATTTCAGATTAGGGTTTTTTTTGTGCTCTCGAAGATCATCTCTTTCGTTGGAGGCCACTTTTCGCGCCGATCGCCAGGTGTTTTAGTTGAGATTTAAAATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTAGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCCCCAAAGGCCATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGGAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTTACCGTTTCAGAAATCTCTGCTGACGGACTGAAGGGACTCGGGACCAAAGTCATTGAGGAAGATGATTGAATTGTCTTTGTTTTTGTTTTCAAGATGAGATCAGGTTGTAGTTTTGATCTGTTTAATGGAAGGAGACGATCATATTTAATTGAAGTTACCTATTAACTTACCTTACCGTTCCTGGTCTTATAAACTATTGAATTCAAATGTTTTGGGTTACTACACTGAGCCTTCTAGTTATTAGTGGAAGAGAGCTTATTTGGTATGTGAAAAGTCATTAGGGTATTATTGGATGATGTAAGAGAAAGAATTTGATCATCATAAACCTTCAAGGATCTCTGTAGGGAACAAATTTTTTGCTGTTGAATCAAACAATGTTTCATATTTAAACTAATCCTTTCAAGGCTACACTGAAAATAACAAAAAAAAAAGAAATGGGATGGTCAAAGATCCTAAATTTCAAGTAGGGTACATAAGAATTTAAAATTAAAGGAAAAAAAAGTTGTAATAGTGGAAGAATGAAAACCCTTATAAGCCATTGATTCACTTCCTCTTCTTCACACCAGACTTGGAAATTAAATGGGATGGTCAAAGATCCTATGAACTGCGCTTAGTTTTGCAAGGGCAGCGTTCTTCAAGTCTGGGCGGTAGTAATTGTCAGCCACCTG

Coding sequence (CDS)

ATGGTGGAGAAGACCAAAGGCAGAAAGGAGGAGGTAGTTACCAGAGAGTACACCATTAACCTTCACAAGCGCCTTCATGGCTGCACCTTTAAGAAGAAGGCCCCAAAGGCCATCAAGGAGATCAGGAGATTTGCTGAGAAGGCTATGGGAACAAAGGATGTGAGAGTGGATGTGAAGCTGAACAAGCATATCTGGAGCAGGGGAATCAGGAGTGTGCCTAGAAGAATCAGAGTTCGCATTGCTCGCAAGAGGAACGATGATGAAGATGCCAAGGAAGAGTTGTACTCCCTCGTTACCGTTTCAGAAATCTCTGCTGACGGACTGAAGGGACTCGGGACCAAAGTCATTGAGGAAGATGATTGA

Protein sequence

MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD
Homology
[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy Swiss-Prot
Match: Q9MAV7 (60S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 5.4e-54
Identity = 107/120 (89.17%), Postives = 114/120 (95.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIKEIR+FA+KAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTV++I A  LKGLG ++IEEDD
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy Swiss-Prot
Match: P46290 (60S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 7.1e-54
Identity = 106/120 (88.33%), Postives = 114/120 (95.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           M +KTKGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIR+FA+KAMGTKDVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NK IWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTV+EI A GLKGLGTK+IE++D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy Swiss-Prot
Match: Q9M573 (60S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.9e-51
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 0 

Query: 5   TKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLNKHI 64
           +K RKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FA+KAMGT DVRVDVKLNKHI
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 65  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI   GLKGLGT+VI+E++
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy Swiss-Prot
Match: P51420 (60S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 2.1e-50
Identity = 99/119 (83.19%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EI A+GL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy Swiss-Prot
Match: Q9STR1 (60S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 4.7e-50
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIR+FAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EI A+GL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Cp4.1LG07g10430 vs. NCBI nr
Match: XP_023538420.1 (60S ribosomal protein L31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228 bits (580), Expect = 6.49e-75
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. NCBI nr
Match: XP_022938098.1 (60S ribosomal protein L31-like [Cucurbita moschata] >KAG6586467.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021323.1 60S ribosomal protein L31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (577), Expect = 1.86e-74
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EISADGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. NCBI nr
Match: XP_022966016.1 (60S ribosomal protein L31-like [Cucurbita maxima])

HSP 1 Score: 224 bits (570), Expect = 2.18e-73
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI ADGLKGLGTKV+EEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPADGLKGLGTKVLEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. NCBI nr
Match: XP_022154770.1 (60S ribosomal protein L31 [Momordica charantia])

HSP 1 Score: 223 bits (568), Expect = 4.39e-73
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. NCBI nr
Match: XP_008459190.1 (PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosomal protein L31 [Cucurbita moschata] >XP_022999548.1 60S ribosomal protein L31 [Cucurbita maxima] >XP_038889415.1 60S ribosomal protein L31 [Benincasa hispida] >KAA0061504.1 60S ribosomal protein L31 [Cucumis melo var. makuwa] >KAG7030475.1 60S ribosomal protein L31 [Cucurbita argyrosperma subsp. argyrosperma] >TYK10769.1 60S ribosomal protein L31 [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 5.13e-72
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy TrEMBL
Match: A0A6J1FHW6 (60S ribosomal protein L31-like OS=Cucurbita moschata OX=3662 GN=LOC111444290 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 9.02e-75
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EISADGLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEISADGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy TrEMBL
Match: A0A6J1HN79 (60S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111465729 PE=3 SV=1)

HSP 1 Score: 224 bits (570), Expect = 1.05e-73
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI ADGLKGLGTKV+EEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPADGLKGLGTKVLEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy TrEMBL
Match: A0A6J1DKK4 (60S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 2.13e-73
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy TrEMBL
Match: A0A5D3CKL3 (60S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00820 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.49e-72
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. ExPASy TrEMBL
Match: A0A6J1KK05 (60S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 2.49e-72
Identity = 115/120 (95.83%), Postives = 119/120 (99.17%), Query Frame = 0 

Query: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKL 60
           MVEKTKGRKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKL 60

Query: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 120
           NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTV+EI A+GLKGLGTKVIEEDD
Sbjct: 61  NKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120

[Close]
BLAST of Cp4.1LG07g10430 vs. TAIR 10
Match: AT5G56710.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 199.5 bits (506), Expect = 1.5e-51
Identity = 99/119 (83.19%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EI A+GL GLGTKVIEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119

[Close]
BLAST of Cp4.1LG07g10430 vs. TAIR 10
Match: AT4G26230.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 198.4 bits (503), Expect = 3.4e-51
Identity = 98/119 (82.35%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIR+FAEK MGTKDVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EI A+GL GLGTK+IEE+D
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119

[Close]
BLAST of Cp4.1LG07g10430 vs. TAIR 10
Match: AT2G19740.1 (Ribosomal protein L31e family protein )

HSP 1 Score: 197.2 bits (500), Expect = 7.5e-51
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           +EK KGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIR+FA KAMGTKDVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
           K IWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTV+EI A+GL GLGTKVIEE++
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119

[Close]
BLAST of Cp4.1LG07g10430 vs. TAIR 10
Match: AT5G56710.2 (Ribosomal protein L31e family protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.6e-29
Identity = 70/119 (58.82%), Postives = 79/119 (66.39%), Query Frame = 0 

Query: 2   VEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRRFAEKAMGTKDVRVDVKLN 61
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIR+FAEKAMGTKDVRVD    
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD---- 60

Query: 62  KHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVSEISADGLKGLGTKVIEEDD 121
                                         EE +SLVTV+EI A+GL GLGTKVIEE+D
Sbjct: 61  ------------------------------EEFFSLVTVAEIPAEGLSGLGTKVIEEED 85

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g10430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9MAV75.4e-5489.1760S ribosomal protein L31 OS=Panax ginseng OX=4054 GN=RPL31 PE=2 SV=1[more]
P462907.1e-5488.3360S ribosomal protein L31 OS=Nicotiana glutinosa OX=35889 GN=RPL31 PE=2 SV=1[more]
Q9M5731.9e-5187.9360S ribosomal protein L31 OS=Perilla frutescens OX=48386 GN=RPL31 PE=2 SV=1[more]
P514202.1e-5083.1960S ribosomal protein L31-3 OS=Arabidopsis thaliana OX=3702 GN=RPL31C PE=3 SV=2[more]
Q9STR14.7e-5082.3560S ribosomal protein L31-2 OS=Arabidopsis thaliana OX=3702 GN=RPL31B PE=3 SV=1[more]
BLAST of Cp4.1LG07g10430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023538420.16.49e-75100.0060S ribosomal protein L31-like [Cucurbita pepo subsp. pepo][more]
XP_022938098.11.86e-7499.1760S ribosomal protein L31-like [Cucurbita moschata] >KAG6586467.1 60S ribosomal ... [more]
XP_022966016.12.18e-7397.5060S ribosomal protein L31-like [Cucurbita maxima][more]
XP_022154770.14.39e-7397.5060S ribosomal protein L31 [Momordica charantia][more]
XP_008459190.15.13e-7295.83PREDICTED: 60S ribosomal protein L31 [Cucumis melo] >XP_022946109.1 60S ribosoma... [more]
BLAST of Cp4.1LG07g10430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FHW69.02e-7599.1760S ribosomal protein L31-like OS=Cucurbita moschata OX=3662 GN=LOC111444290 PE=... [more]
A0A6J1HN791.05e-7397.5060S ribosomal protein L31-like OS=Cucurbita maxima OX=3661 GN=LOC111465729 PE=3 ... [more]
A0A6J1DKK42.13e-7397.5060S ribosomal protein L31 OS=Momordica charantia OX=3673 GN=LOC111021941 PE=3 SV... [more]
A0A5D3CKL32.49e-7295.8360S ribosomal protein L31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6J1KK052.49e-7295.8360S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111493875 PE=3 SV=1[more]
BLAST of Cp4.1LG07g10430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G56710.11.5e-5183.19Ribosomal protein L31e family protein [more]
AT4G26230.13.4e-5182.35Ribosomal protein L31e family protein [more]
AT2G19740.17.5e-5183.19Ribosomal protein L31e family protein [more]
AT5G56710.23.6e-2958.82Ribosomal protein L31e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 10..93
e-value: 1.0E-49
score: 181.1
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 11..92
e-value: 9.9E-43
score: 144.2
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 1..120
IPR000054Ribosomal protein L31eCDDcd00463Ribosomal_L31ecoord: 9..92
e-value: 1.03164E-32
score: 108.04
IPR023621Ribosomal protein L31e domain superfamilyGENE3D3.10.440.10coord: 9..120
e-value: 4.4E-49
score: 167.0
IPR023621Ribosomal protein L31e domain superfamilySUPERFAMILY54575Ribosomal protein L31ecoord: 11..92
NoneNo IPR availablePANTHERPTHR10956:SF3360S RIBOSOMAL PROTEIN L31-2-RELATEDcoord: 1..120
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 54..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g10430.1Cp4.1LG07g10430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome