Cp4.1LG07g08020 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g08020
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PSI subunit V
Location	Cp4.1LG07: 7109947 .. 7114733 (-)
RNA-Seq Expression	Cp4.1LG07g08020
Synteny	Cp4.1LG07g08020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAGGTAACCCAATGCATAATTCCACTCTTTTTCAGCTTTCGAGATATATATATATATATATATATAACGTACTCTTTCAAGGGATACTAACTTAAAGATCTCTACAAGTTGAGTAAGAATTTGTTGAGGATTGTTGGGAGAGGAGTCACACGTCAGCTAATTATTAGGACCTACATCTCCATTAGTACGAGGCCTTTTGGGGAAGCCCATAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGCCGTGATTCCTAACATGGTATTAGAGCCATACTCTTAATTTAGCCATGTCAACAGAATCCTCAAATGTCAAACAAAGAGTGTACTTTGTTTGAGGGCTCTAGAGAAGGAGTCGAGCCTCGGTTAAAGGGAGGCTATTTGAGTGCTCCATATGCCTCAAGGGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGTATTGTTGGGAGAGGAGTCCCACATCGGCTAATTAAGGAGTTGATCATGGGTTTATAAGCAAGGACTACGTCTCCATTGATATGAGGCTTTTTGGGGAAGCCCAAAACAAAGCCATGAGAGCCATGAGAGCTTACGCTCAAAGTGGACAATCTCATAGTCGTTATTAGTAGCATAATTCAATCATTCGTAAAAAGTGTGTTTGCTTTTAAAAAAAATGTTATACTTCTTTGAAGAACACTTCCACATGTTAATAACCTATTGAAACTGTTGCAGCCAACTTACCAAGTGATTCAGCCCATCAATGGAGACCCCTTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCTCTGATAGCCTGGTACCTCTCAAACCTCCCAGCTTACAGGACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTCGGTTTGGCACATGGTTTTTTTCTCGTCGGTCCGTTTGTTAAAGCTGGTCCTCTGAGGAACACAGCCTACGCCGGAGGAGCTGGCTCGCTGGCCGCTGGCGGCCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGAGTTGCATCCTTCAATGAAGGAGAGCCATCAACTGCACCGTCGTTGACCTTGACCGGTCGGAAGAAGACCCCGGATCAGCTGCAAACAGCTGATGGGTGGGCAAAATTCTCTGGCGGATTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCGTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTTCGTCAAGTAGATTTTGTATCGTTTTCTGTTTCTGCAATGCAACTTCCATGTCTGTGTTAAGGAAACATAAAAATTGTATATTTCATTTCAAACCTATTTGTTAGATCCTTTGTCATTGCATATTGATTTCCCTTTTGAAACTGTTGTGTTCTCATGTTCTATTTGTTTCTCACAAACTATAGCTTCAGTGGCTGCACTGTAAATTGGAGGGAGAACATCATCAGCACACTAGAAAGTGCTTTCAACTAAATTGCCTATGATAATTTTAGATCATATAAAACCAATTTTAAGCACTTTCTTCGAGACCACACGTAGAAAAGTTGTAACAACCTAAGCCCACCACTAGCAAATACTGTCCTCTTTGGGCTTTCCTTTTCGGGTTCCCCTTAAAGTTTTAAAACACGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAGGAATTCTTTGTTCCCCTCTCCAACTGACGTGGGATCTCACAATCCAACACCTTAAGGGCCCAACGTCCTCGCTGGCACACCGCTTGGTGTTTAGCTTTGAGACAATTTGTAACAGCCCAAGCCCACCGCTAGTAGATATTGTTCTTTTTGGGCTTTCCCTTTTAGGCTTTCCCTTTTAGGCTTTCCCTCAAGGTTAAAAGAGGTTTTCACATCCTTATAAGGAATTCTTTGTTCTCTTCTCCAACCGATGTGGAATCTCACAATCCACCCCCTTGGGGGCCTAGTGTTCTCGTTGGCACACCGCTCGGTGTTTGGCTATGATACCATTTGTAACAGCCCAAACCCACCGCTAACAGATATNCATTGAACAAAGTACGCCTCCCCTTAATCGAGGCTCGATTATTTTCCATAACCTAAAATTGAAGAAGGTTTTCATCCTCTCACTCTATCGTCGACTTGATTTTTTAAAGTTTTATTTACTAATTTAAAGTTTTTAAAATATTTTTTTAATTAAAACTTTTGTTTTTAATTAAAGTAAAATATTAATTCGTAAAAAATCAATTTATTTATTTTTAAAAATTATATTCCAAATAGAAGTTGTTGGAGACCTATTTAATTCGGATGGATTTATTATTATAAATAAATAATTAAAAAAAATATGGATAAGGGATAAGATGACGTGGCAAGTTCCATCCAATGAGAAGAGAGGGTTGATCAACCAAAGCCTCCCACAAATTTCCATGGCCACTAACAATAAACCAACACCCAAAGCCAAATCTAAAATCCTCACCTCATTCTTCTTCTTCTCTGCCATTGATCCTTTCACAAACCAAAGGCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAGGTAACCCAATGCATAATTCCACTCTTTTTCAGCTTTCGAGATATATATATATATATATATATAACGTACTCTTTCAAGGGATACTAACTTAAAGATCTCTACAAGTTGAGTAAGAATTTGTTGAGGATTGTTGGGAGAGGAGTCACACGTCAGCTAATTATTAGGACCTACATCTCCATTAGTACGAGGCCTTTTGGGGAAGCCCATAGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGCCGTGATTCCTAACATGGTATTAGAGCCATACTCTTAATTTAGCCATGTCAACAGAATCCTCAAATGTCAAACAAAGAGTGTACTTTGTTTGAGGGCTCTAGAGAAGGAGTCGAGCCTCGGTTAAAGGGAGGCTATTTGAGTGCTCCATATGCCTCAAGGGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGTATTGTTGGGAGAGGAGTCCCACATCGGCTAATTAAGGAGTTGATCATGGGTTTATAAGCAAGGACTACGTCTCCATTGATATGAGGCTTTTTGGGGAAGCCCAAAACAAAGCCATGAGAGCCATGAGAGCTTACGCTCAAAGTGGACAATCTCATAGTCGTTATTAGTAGCATAATTCAATCATTCGTAAAAAGTGTGTTTGCTTTTAAAAAAAATGTTATACTTCTTTGAAGAACACTTCCACATGTTAATAACCTATTGAAACTGTTGCAGCCAACTTACCAAGTGATTCAGCCCATCAATGGAGACCCCTTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCTCTGATAGCCTGGTACCTCTCAAACCTCCCAGCTTACAGGACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTCGGTTTGGCACATGGTTTTTTTCTCGTCGGTCCGTTTGTTAAAGCTGGTCCTCTGAGGAACACAGCCTACGCCGGAGGAGCTGGCTCGCTGGCCGCTGGCGGCCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGAGTTGCATCCTTCAATGAAGGAGAGCCATCAACTGCACCGTCGTTGACCTTGACCGGTCGGAAGAAGACCCCGGATCAGCTGCAAACAGCTGATGGGTGGGCAAAATTCTCTGGCGGATTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCGTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTTCGTCAAGTAGATTTTGTATCGTTTTCTGTTTCTGCAATGCAACTTCCATGTCTGTGTTAAGGAAACATAAAAATTGTATATTTCATTTCAAACCTATTTGTTAGATCCTTTGTCATTGCATATTGATTTCCCTTTTGAAACTGTTGTGTTCTCATGTTCTATTTGTTTCTCACAAACTATAGCTTCAGTGGCTGCACTGTAAATTGGAGGGAGAACATCATCAGCACACTAGAAAGTGCTTTCAACTAAATTGCCTATGATAATTTTAGATCATATAAAACCAATTTTAAGCACTTTCTTCGAGACCACACGTAGAAAAGTTGTAACAACCTAAGCCCACCACTAGCAAATACTGTCCTCTTTGGGCTTTCCTTTTCGGGTTCCCCTTAAAGTTTTAAAACACGTCTGTTAGGGAGAGGTTTCCACACCCNATCAACCAAAGCCTCCCACAAATTTCCATGGCCACTAACAATAAACCAACACCCAAAGCCAAATCTAAAATCCTCACCTCATTCTTCTTCTTCTCTGCCATTGATCCTTTCACAAACCAAAGGCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAG

mRNA sequence

GCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAGCCAACTTACCAAGTGATTCAGCCCATCAATGGAGACCCCTTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCTCTGATAGCCTGGTACCTCTCAAACCTCCCAGCTTACAGGACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTCGGTTTGGCACATGGTTTTTTTCTCGTCGGTCCGTTTGTTAAAGCTGGTCCTCTGAGGAACACAGCCTACGCCGGAGGAGCTGGCTCGCTGGCCGCTGGCGGCCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGAGTTGCATCCTTCAATGAAGGAGAGCCATCAACTGCACCGTCGTTGACCTTGACCGGTCGGAAGAAGACCCCGGATCAGCTGCAAACAGCTGATGGGTGGGCAAAATTCTCTGGCGGATTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCGTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTTCGTCAACTTCAGTGGCTGCACTGCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAGCCAACTTACCAAGTGATTCAGCCCATCAATGGAGACCCCTTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCTCTGATAGCCTGGTACCTCTCAAACCTCCCAGCTTACAGGACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTCGGTTTGGCACATGGTTTTTTTCTCGTCGGTCCGTTTGTTAAAGCTGGTCCTCTGAGGAACACAGCCTACGCCGGAGGAGCTGGCTCGCTGGCCGCTGGCGGCCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGAGTTGCATCCTTCAATGAAGGAGAGCCATCAACTGCACCGTCGTTGACCTTGACCGGTCGGAAGAAGACCCCGGATCAGCTGCAAACAGCTGATGGGTGGGCAAAATTCTCTGGCGGATTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCGTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTTCGTCAACTTCAGTGGCTGCACTGCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAG

Coding sequence (CDS)

GCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAGCCAACTTACCAAGTGATTCAGCCCATCAATGGAGACCCCTTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCTCTGATAGCCTGGTACCTCTCAAACCTCCCAGCTTACAGGACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTCGGTTTGGCACATGGTTTTTTTCTCGTCGGTCCGTTTGTTAAAGCTGGTCCTCTGAGGAACACAGCCTACGCCGGAGGAGCTGGCTCGCTGGCCGCTGGCGGCCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGAGTTGCATCCTTCAATGAAGGAGAGCCATCAACTGCACCGTCGTTGACCTTGACCGGTCGGAAGAAGACCCCGGATCAGCTGCAAACAGCTGATGGGTGGGCAAAATTCTCTGGCGGATTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCGTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTTCGTCAACTTCAGTGGCTGCACTGCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAGCCAACTTACCAAGTGATTCAGCCCATCAATGGAGACCCCTTCATTGGAAGCCTTGAGACTCCAGTAACCTCAAGCCCTCTGATAGCCTGGTACCTCTCAAACCTCCCAGCTTACAGGACAGCAGTCAGTCCATTGCTGAGGGGAATTGAAGTCGGTTTGGCACATGGTTTTTTTCTCGTCGGTCCGTTTGTTAAAGCTGGTCCTCTGAGGAACACAGCCTACGCCGGAGGAGCTGGCTCGCTGGCCGCTGGCGGCCTCATTGTCATTTTGAGCATCTGCTTGACAATGTATGGAGTTGCATCCTTCAATGAAGGAGAGCCATCAACTGCACCGTCGTTGACCTTGACCGGTCGGAAGAAGACCCCGGATCAGCTGCAAACAGCTGATGGGTGGGCAAAATTCTCTGGCGGATTCTTCTTCGGCGGGATCTCCGGCGTGATCTGGGCGTACTTCCTCCTCTATGTCTTGGACCTTCCTTACTTCGTCAACTTCAGTGGCTGCACTGCAGCAGAAGCAGCAGCCATGGCCACTGCAACCTCCCCCATTGCCAGCCAGCTCAGTTCCGCCTTTACTTCATCGAACACTAGAGCTTTGATCGCTCCCAAAGGCCTCTCCGTCTCGCCGCTCCGACGCGTACCTGCAAGAACACACTCCTTCACCATCAGAGCCATACAAGCTGATAAG

Protein sequence

AAEAAAMATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVNFSGCTAAEAAAMATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVNFSGCTAAEAAAMATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADK

Homology

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BLAST of Cp4.1LG07g08020 vs. ExPASy Swiss-Prot
Match: Q39654 (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=3659 GN=PSAL PE=2 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 2.9e-112
Identity = 205/216 (94.91%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSP ASQLSS+F SSNTRALI+PKGLS SPLRR+P RTHSFTIRAIQADKPT+QVI
Sbjct: 1   MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILS+CLTMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+V
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYV 216

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BLAST of Cp4.1LG07g08020 vs. ExPASy Swiss-Prot
Match: Q9SUI4 (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAL PE=1 SV=2)

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-91
Identity = 170/218 (77.98%), Postives = 194/218 (88.99%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSN-TRALIAPKGLSVSPLRRVPA-RTHSFTIRAIQADKPTYQ 66
           MA + SP+ASQL S+F+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 67  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 126
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 127 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQ 186
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 187 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 223
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYFV
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFV 218

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BLAST of Cp4.1LG07g08020 vs. ExPASy Swiss-Prot
Match: Q41385 (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=3562 GN=PSAL PE=1 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.1e-90
Identity = 169/217 (77.88%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPA--RTHSFTIRAIQADKPTYQ 66
           MA  TSP+ASQL S FT   T+AL+ PKG+S   LR  P+  R  SFT+RAI+ +KPTYQ
Sbjct: 1   MAATTSPMASQLKSGFT---TKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQ 60

Query: 67  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 126
           VIQP+NGDPFIG LETPVTSSPLIAWYLSNLPAYRTAV+PLLRG+EVGLAHGF LVGPFV
Sbjct: 61  VIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFV 120

Query: 127 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQ 186
           KAGPLRNT YAG AGSLAA GL+VILS+CLTMYG+ASF EGEPS AP+LTLTGRKK PDQ
Sbjct: 121 KAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQ 180

Query: 187 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYF 222
           LQ+ADGWAKF+GGFFFGG+SGV WA FL+YVLDLPY+
Sbjct: 181 LQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYY 214

[Close]

BLAST of Cp4.1LG07g08020 vs. ExPASy Swiss-Prot
Match: P23993 (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAL PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.2e-78
Identity = 152/216 (70.37%), Postives = 176/216 (81.48%), Query Frame = 0


Query: 7   MATA-TSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQV 66
           MATA   P+ASQ+       +  A   P+G+S + L R P     F ++A+++DKPTYQV
Sbjct: 1   MATAYAPPMASQV-----MKSGLACSKPRGMSGASLTRRP----RFVVKAVKSDKPTYQV 60

Query: 67  IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVK 126
           +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAVSPLLRGIEVGLAHG+ LVGPF  
Sbjct: 61  VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFAL 120

Query: 127 AGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQL 186
            GPLRNT   G AG+L A GL+ ILS+CLTMYGVASFNEGEPSTAP LTLTGRKK  D+L
Sbjct: 121 TGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKL 180

Query: 187 QTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYF 222
           QTA+GW++F+GGFFFGG+SG +WAYFLLYVLDLPYF
Sbjct: 181 QTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYF 207

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BLAST of Cp4.1LG07g08020 vs. ExPASy Swiss-Prot
Match: O78469 (Photosystem I reaction center subunit XI OS=Guillardia theta OX=55529 GN=psaL PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.7e-33
Identity = 72/150 (48.00%), Postives = 97/150 (64.67%), Query Frame = 0


Query: 64  QVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPF 123
           Q ++P N DPF+G+L TP+T+S      LSNLPAYR  +SPLLRG+E+G+ HG+FLVGPF
Sbjct: 3   QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPF 62

Query: 124 VKAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPD 183
            K GPLRN+  A  AG  +A GLI+I++ CL +YGV SFN  +                +
Sbjct: 63  YKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------E 122

Query: 184 QLQTADGWAKFSGGFFFGGISGVIWAYFLL 214
           QLQ+A GW +F+ G+  G I G  +AY L+
Sbjct: 123 QLQSAKGWRQFTSGWLVGSIGGASFAYILI 138

[Close]

BLAST of Cp4.1LG07g08020 vs. NCBI nr
Match: XP_023536879.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538619.1 photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422 bits (1086), Expect = 4.92e-144
Identity = 216/217 (99.54%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. NCBI nr
Match: XP_022965497.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima])

HSP 1 Score: 421 bits (1082), Expect = 1.99e-143
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSSAFTSSNTRALIAPKGLS SPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. NCBI nr
Match: KAG6586150.1 (Photosystem I reaction center subunit XI, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020982.1 Photosystem I reaction center subunit XI, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421 bits (1082), Expect = 1.99e-143
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MA+ATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MASATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. NCBI nr
Match: XP_022937709.1 (photosystem I reaction center subunit XI, chloroplastic [Cucurbita moschata])

HSP 1 Score: 421 bits (1081), Expect = 2.82e-143
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MA+ATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MASATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. NCBI nr
Match: XP_022149833.1 (photosystem I reaction center subunit XI, chloroplastic [Momordica charantia])

HSP 1 Score: 415 bits (1066), Expect = 5.29e-141
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSS+F SSNTRALI+PKGLS SPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. ExPASy TrEMBL
Match: A0A6J1HKH3 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 9.62e-144
Identity = 215/217 (99.08%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSSAFTSSNTRALIAPKGLS SPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSAFTSSNTRALIAPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. ExPASy TrEMBL
Match: A0A6J1FBZ4 (PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 1.36e-143
Identity = 214/217 (98.62%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MA+ATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MASATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. ExPASy TrEMBL
Match: A0A6J1D7U0 (PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 2.56e-141
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSS+F SSNTRALI+PKGLS SPLRRVPARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRVPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKK PDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKAPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. ExPASy TrEMBL
Match: A0A1S3B555 (PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 5.92e-140
Identity = 208/217 (95.85%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSS+F SSNTRALI+PKGLS SPLRR+P RTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPD LQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPY+V 
Sbjct: 181 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. ExPASy TrEMBL
Match: A0A6J1KBZ8 (PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111492490 PE=3 SV=1)

HSP 1 Score: 411 bits (1056), Expect = 8.39e-140
Identity = 207/217 (95.39%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSNTRALIAPKGLSVSPLRRVPARTHSFTIRAIQADKPTYQVI 66
           MATATSPIASQLSS+F SS TRAL+APKGLSVSPLRR+PARTHSFTIRAIQADKPTYQVI
Sbjct: 1   MATATSPIASQLSSSFASSTTRALVAPKGLSVSPLRRIPARTHSFTIRAIQADKPTYQVI 60

Query: 67  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKA 126
           QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGF LVGPFVKA
Sbjct: 61  QPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKA 120

Query: 127 GPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQLQ 186
           GPLRNTAYAGGAGSLAAGGLI ILSICLTMYG+ASFNEGEPSTAPSLTLTGRKKTPDQLQ
Sbjct: 121 GPLRNTAYAGGAGSLAAGGLIAILSICLTMYGIASFNEGEPSTAPSLTLTGRKKTPDQLQ 180

Query: 187 TADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFVN 223
           TADGWAKF+GGFFFGGISGVIWAYFLLYVLDLPYFV 
Sbjct: 181 TADGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYFVK 217

[Close]

BLAST of Cp4.1LG07g08020 vs. TAIR 10
Match: AT4G12800.1 (photosystem I subunit l )

HSP 1 Score: 338.6 bits (867), Expect = 9.0e-93
Identity = 170/218 (77.98%), Postives = 194/218 (88.99%), Query Frame = 0


Query: 7   MATATSPIASQLSSAFTSSN-TRALIAPKGLSVSPLRRVPA-RTHSFTIRAIQADKPTYQ 66
           MA + SP+ASQL S+F+S++ ++ L  PKG+S +P    P  R  SFT+RA+++DK T+Q
Sbjct: 1   MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQ 60

Query: 67  VIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFV 126
           V+QPINGDPFIGSLETPVTSSPLIAWYLSNLP YRTAV+PLLRG+EVGLAHGFFLVGPFV
Sbjct: 61  VVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFV 120

Query: 127 KAGPLRNTAYAGGAGSLAAGGLIVILSICLTMYGVASFNEGEPSTAPSLTLTGRKKTPDQ 186
           KAGPLRNTAYAG AGSLAA GL+VILS+CLT+YG++SF EGEPS APSLTLTGRKK PDQ
Sbjct: 121 KAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQ 180

Query: 187 LQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYFV 223
           LQTADGWAKF+GGFFFGGISGV WAYFLLYVLDLPYFV
Sbjct: 181 LQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFV 218

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g08020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39654	2.9e-112	94.91	Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q9SUI4	1.3e-91	77.98	Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q41385	1.1e-90	77.88	Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea OX=...	[more]
P23993	1.2e-78	70.37	Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare OX=45...	[more]
O78469	2.7e-33	48.00	Photosystem I reaction center subunit XI OS=Guillardia theta OX=55529 GN=psaL PE...	[more]

BLAST of Cp4.1LG07g08020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536879.1	4.92e-144	99.54	photosystem I reaction center subunit XI, chloroplastic [Cucurbita pepo subsp. p...	[more]
XP_022965497.1	1.99e-143	99.08	photosystem I reaction center subunit XI, chloroplastic [Cucurbita maxima]	[more]
KAG6586150.1	1.99e-143	99.08	Photosystem I reaction center subunit XI, chloroplastic, partial [Cucurbita argy...	[more]
XP_022937709.1	2.82e-143	98.62	photosystem I reaction center subunit XI, chloroplastic [Cucurbita moschata]	[more]
XP_022149833.1	5.29e-141	97.24	photosystem I reaction center subunit XI, chloroplastic [Momordica charantia]	[more]

BLAST of Cp4.1LG07g08020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKH3	9.62e-144	99.08	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111465381 PE=3 SV=1	[more]
A0A6J1FBZ4	1.36e-143	98.62	PSI subunit V OS=Cucurbita moschata OX=3662 GN=LOC111444030 PE=3 SV=1	[more]
A0A6J1D7U0	2.56e-141	97.24	PSI subunit V OS=Momordica charantia OX=3673 GN=LOC111018169 PE=3 SV=1	[more]
A0A1S3B555	5.92e-140	95.85	PSI subunit V OS=Cucumis melo OX=3656 GN=LOC103485887 PE=3 SV=1	[more]
A0A6J1KBZ8	8.39e-140	95.39	PSI subunit V OS=Cucurbita maxima OX=3661 GN=LOC111492490 PE=3 SV=1	[more]

BLAST of Cp4.1LG07g08020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G12800.1	9.0e-93	77.98	photosystem I subunit l	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003757	Photosystem I PsaL, reaction centre subunit XI	PFAM	PF02605	PsaL	coord: 65..217 e-value: 1.6E-57 score: 193.3 coord: 293..445 e-value: 1.6E-57 score: 193.3
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	GENE3D	1.20.1240.10	Photosystem I PsaL, reaction centre subunit XI	coord: 288..451 e-value: 1.1E-71 score: 241.4 coord: 60..223 e-value: 1.1E-71 score: 241.4
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	81568	Photosystem I reaction center subunit XI, PsaL	coord: 294..451
IPR036592	Photosystem I PsaL, reaction centre subunit XI superfamily	SUPERFAMILY	81568	Photosystem I reaction center subunit XI, PsaL	coord: 66..223
IPR022980	Photosystem I, reaction centre subunit XI	PANTHER	PTHR34803	FAMILY NOT NAMED	coord: 7..223 coord: 235..451 coord: 463..516

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g08020.1	Cp4.1LG07g08020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009538	photosystem I reaction center
cellular_component	GO:0009522	photosystem I