Cp4.1LG07g06760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCAACAAAAAAAAAAACCAAGTTATAGCGTAAGATCCAAACACGCCCCTTTCCTAATGCAATCCAAAGGCCATTATTCCACTTGACCTACCATCTCCCAATCCTGACCGTTCAATCCAAAACCAGTTCACTCATCCCTTTCCATTCTTTATGGCAATGAAGCAATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAGAAAGAATGGTAATCCCGACATGGCTCGAATCTTTACTGTCCACGCCGTTTTTCTATGTGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCATGTTATTCAGGTCGGTTTTCCTTATCATAATCGAACATGATCCTCTATTTCACAATGTGGGTATCAATTTTTAGCCTCTTGAATTTGTAATTCATGTAGATTCGGAGATCGTCGTACCATGATGTGGTAAGAGTAGCAGAGATCGAGAAAGTTTTGGATATAAGTGAAATTCAAACGTATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAAAGACCTCAGCCGAAGAGCTCGGCTAGTAAAGGAGGCACCCACGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTAAATTTCTTTGACTTCAAATTGAACTATGCTCAAGTTGATACTTTATGTATTATTTTAAATTTTACTGATAAAATGACCCATTAGTTCATGAAATTGACATATCTAATGATGAAATTGATAATTTACCTACTTTATAAAATGACCTAATATAGCATTATAACTTACCTAACCTCGAGTGGGTCCGTGCTATTATGGAAAACAATAATGTAACTATAGGTATTAACGGACCATTTCTTCTTCTTTATAAGCTTTCGGCGAAAATACTCTTTTCCATAAGTTGCAAACCTACTCGAGCGTAGTTTAGATTTGAATCTCCGTTTTGGGTTTTATACTATCAAATCAACTGCCGTTTTCATGCGTGGCTTAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATATACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATCAAGTAATTAATTAATTAATTAACTTAATTTCATTTAATTAATTATAGCAATTTTTTTTCTTTTTTTTTAATTATGGAAATAATTCATTTCCCATGATGTTCCCCATGTAATTATTTATAGATCTCACCACACCCAATCATTTAACAAACCCCACATTGGGTTTTCTTGTTGTA CACCAACAAAAAAAAAAACCAAGTTATAGCGTAAGATCCAAACACGCCCCTTTCCTAATGCAATCCAAAGGCCATTATTCCACTTGACCTACCATCTCCCAATCCTGACCGTTCAATCCAAAACCAGTTCACTCATCCCTTTCCATTCTTTATGGCAATGAAGCAATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAGAAAGAATGGTAATCCCGACATGGCTCGAATCTTTACTGTCCACGCCGTTTTTCTATGTGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCATGTTATTCAGATTCGGAGATCGTCGTACCATGATGTGGTAAGAGTAGCAGAGATCGAGAAAGTTTTGGATATAAGTGAAATTCAAACGTATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAAAGACCTCAGCCGAAGAGCTCGGCTAGTAAAGGAGGCACCCACGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATATACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAATCAAGTAATTAATTAATTAATTAACTTAATTTCATTTAATTAATTATAGCAATTTTTTTTCTTTTTTTTTAATTATGGAAATAATTCATTTCCCATGATGTTCCCCATGTAATTATTTATAGATCTCACCACACCCAATCATTTAACAAACCCCACATTGGGTTTTCTTGTTGTA ATGCTTATAAAACCCAATTTTCTTGGGATTGTTTGGGATTTTCTCGGGAACCAAACACAAAACAAAGAAAGAATGGTAATCCCGACATGGCTCGAATCTTTACTGTCCACGCCGTTTTTCTATGTGTGTCCTTTGCATAAAGACGCTCCGAGAAGTGAATGCAATATGTTTTGCCTCGATTGTCATCATCGCTCGTTCTGCTTCTATTGCCGATCCGACCTACACCACGATCACCATGTTATTCAGATTCGGAGATCGTCGTACCATGATGTGGTAAGAGTAGCAGAGATCGAGAAAGTTTTGGATATAAGTGAAATTCAAACGTATGTGATAAACAGCGCGAGAGTTTTGTTTTTGAATGAAAGACCTCAGCCGAAGAGCTCGGCTAGTAAAGGAGGCACCCACGTGTGTGAGATTTGTAGTAGATGTCTCTTGGATCCCTTTCGTTTCTGCTCTCTTGGTTGCAAGGTCAAGAACGAGGATTCAAACTTTTACCCGAACGAGCAGAAACACGAGGAGGTGTCGAGAAGAAGGGAAAGAATAGGAAGAAGATTGGGAGAAGAAGAAGAAGAAGAAGAAGAAGAATTGCGTGTAAGGAGAAACCAAGAAGGTGAAATATACCAAAATCACACGCATCCTTCACATTCAAATTCAAGGAGGAGGAAAGGCATCCCTCAAAGAGCACCTTTTTAA MLIKPNFLGIVWDFLGNQTQNKERMVIPTWLESLLSTPFFYVCPLHKDAPRSECNMFCLDCHHRSFCFYCRSDLHHDHHVIQIRRSSYHDVVRVAEIEKVLDISEIQTYVINSARVLFLNERPQPKSSASKGGTHVCEICSRCLLDPFRFCSLGCKVKNEDSNFYPNEQKHEEVSRRRERIGRRLGEEEEEEEEELRVRRNQEGEIYQNHTHPSHSNSRRRKGIPQRAPF Homology
BLAST of Cp4.1LG07g06760 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26 Identity = 58/130 (44.62%), Postives = 84/130 (64.62%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. NCBI nr
Match: XP_023538148.1 (uncharacterized protein LOC111799005 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 469 bits (1206), Expect = 9.35e-167 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. NCBI nr
Match: XP_022969532.1 (uncharacterized protein LOC111468520 [Cucurbita maxima]) HSP 1 Score: 406 bits (1043), Expect = 2.79e-142 Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. NCBI nr
Match: KAG6586012.1 (hypothetical protein SDJN03_18745, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 404 bits (1039), Expect = 1.18e-141 Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. NCBI nr
Match: KAG7037381.1 (hypothetical protein SDJN02_01006 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404 bits (1037), Expect = 2.46e-141 Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. NCBI nr
Match: XP_022938109.1 (uncharacterized protein LOC111444296 [Cucurbita moschata]) HSP 1 Score: 403 bits (1036), Expect = 3.50e-141 Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. ExPASy TrEMBL
Match: A0A6J1HWK1 (uncharacterized protein LOC111468520 OS=Cucurbita maxima OX=3661 GN=LOC111468520 PE=4 SV=1) HSP 1 Score: 406 bits (1043), Expect = 1.35e-142 Identity = 201/206 (97.57%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. ExPASy TrEMBL
Match: A0A6J1FD43 (uncharacterized protein LOC111444296 OS=Cucurbita moschata OX=3662 GN=LOC111444296 PE=4 SV=1) HSP 1 Score: 403 bits (1036), Expect = 1.69e-141 Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. ExPASy TrEMBL
Match: A0A6J1DG68 (uncharacterized protein LOC111020539 OS=Momordica charantia OX=3673 GN=LOC111020539 PE=4 SV=1) HSP 1 Score: 310 bits (795), Expect = 7.35e-105 Identity = 164/212 (77.36%), Postives = 178/212 (83.96%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. ExPASy TrEMBL
Match: A0A0A0LY15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G136780 PE=4 SV=1) HSP 1 Score: 303 bits (775), Expect = 1.07e-101 Identity = 165/214 (77.10%), Postives = 174/214 (81.31%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. ExPASy TrEMBL
Match: A0A1S3CGK9 (uncharacterized protein LOC103500687 OS=Cucumis melo OX=3656 GN=LOC103500687 PE=4 SV=1) HSP 1 Score: 301 bits (771), Expect = 6.36e-101 Identity = 166/226 (73.45%), Postives = 179/226 (79.20%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein ) HSP 1 Score: 215.7 bits (548), Expect = 3.9e-56 Identity = 117/211 (55.45%), Postives = 138/211 (65.40%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein ) HSP 1 Score: 167.9 bits (424), Expect = 9.3e-42 Identity = 97/211 (45.97%), Postives = 124/211 (58.77%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein ) HSP 1 Score: 165.2 bits (417), Expect = 6.0e-41 Identity = 103/252 (40.87%), Postives = 141/252 (55.95%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. TAIR 10
Match: AT1G21000.2 (PLATZ transcription factor family protein ) HSP 1 Score: 165.2 bits (417), Expect = 6.0e-41 Identity = 103/252 (40.87%), Postives = 141/252 (55.95%), Query Frame = 0
BLAST of Cp4.1LG07g06760 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein ) HSP 1 Score: 158.7 bits (400), Expect = 5.7e-39 Identity = 103/239 (43.10%), Postives = 132/239 (55.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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