Cp4.1LG07g06740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACTGGTAAGAGCTATTTCGTCTTCGAAATCGACGAATCCGACCTCTTCAACTCCGCACGCGGCGGCGGAGTTTCCAAAGCGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTGGAGACGGAAGCGTAACGACAGCGGCGGCGTTGCCGGTAAACATTCCGGACTGGTCGAAGATCCTGAGAAATGAGTACATCGAGAATCGGAGAGATAGATTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAGAGCGATCGATTTAGGGTTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGGATTGGAAGAACGTTGAAAGGGAGAGATCTGAGTAGAGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA ATGGCGACTGGTAAGAGCTATTTCGTCTTCGAAATCGACGAATCCGACCTCTTCAACTCCGCACGCGGCGGCGGAGTTTCCAAAGCGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTGGAGACGGAAGCGTAACGACAGCGGCGGCGTTGCCGGTAAACATTCCGGACTGGTCGAAGATCCTGAGAAATGAGTACATCGAGAATCGGAGAGATAGATTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAGAGCGATCGATTTAGGGTTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGGATTGGAAGAACGTTGAAAGGGAGAGATCTGAGTAGAGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA ATGGCGACTGGTAAGAGCTATTTCGTCTTCGAAATCGACGAATCCGACCTCTTCAACTCCGCACGCGGCGGCGGAGTTTCCAAAGCGCGAATCTCCAAGCGGATATCGGCGAAGGTAGTGGACGCTGGAGACGGAAGCGTAACGACAGCGGCGGCGTTGCCGGTAAACATTCCGGACTGGTCGAAGATCCTGAGAAATGAGTACATCGAGAATCGGAGAGATAGATTCGAGGAAGAGGCGAACTGCGGCGATGAGTTGGAGAGCGATCGATTTAGGGTTCCGCCGCACGAGTTTGTGGCGAGGACGAGGATGGCGTCGTTTTCCGTTGAGGAAGGGATTGGAAGAACGTTGAAAGGGAGAGATCTGAGTAGAGTTCGAGATGCGATTTGGCTAAAAACTGGATTCGAAGATTGA MATGKSYFVFEIDESDLFNSARGGGVSKARISKRISAKVVDAGDGSVTTAAALPVNIPDWSKILRNEYIENRRDRFEEEANCGDELESDRFRVPPHEFVARTRMASFSVEEGIGRTLKGRDLSRVRDAIWLKTGFED Homology
BLAST of Cp4.1LG07g06740 vs. NCBI nr
Match: XP_023536989.1 (uncharacterized protein LOC111798210 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 272 bits (695), Expect = 6.62e-92 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. NCBI nr
Match: KAG6586019.1 (hypothetical protein SDJN03_18752, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020795.1 hypothetical protein SDJN02_17483, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 254 bits (648), Expect = 2.12e-84 Identity = 128/135 (94.81%), Postives = 129/135 (95.56%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. NCBI nr
Match: XP_022938325.1 (uncharacterized protein LOC111444460 [Cucurbita moschata]) HSP 1 Score: 251 bits (641), Expect = 2.47e-83 Identity = 127/135 (94.07%), Postives = 128/135 (94.81%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. NCBI nr
Match: XP_022969594.1 (uncharacterized protein LOC111468572 [Cucurbita maxima]) HSP 1 Score: 249 bits (636), Expect = 1.53e-82 Identity = 126/136 (92.65%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. NCBI nr
Match: XP_008462513.1 (PREDICTED: uncharacterized protein LOC103500846 [Cucumis melo]) HSP 1 Score: 184 bits (466), Expect = 1.39e-56 Identity = 109/169 (64.50%), Postives = 117/169 (69.23%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. ExPASy TrEMBL
Match: A0A6J1FJG2 (uncharacterized protein LOC111444460 OS=Cucurbita moschata OX=3662 GN=LOC111444460 PE=4 SV=1) HSP 1 Score: 251 bits (641), Expect = 1.20e-83 Identity = 127/135 (94.07%), Postives = 128/135 (94.81%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. ExPASy TrEMBL
Match: A0A6J1I330 (uncharacterized protein LOC111468572 OS=Cucurbita maxima OX=3661 GN=LOC111468572 PE=4 SV=1) HSP 1 Score: 249 bits (636), Expect = 7.41e-83 Identity = 126/136 (92.65%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. ExPASy TrEMBL
Match: A0A1S3CH53 (uncharacterized protein LOC103500846 OS=Cucumis melo OX=3656 GN=LOC103500846 PE=4 SV=1) HSP 1 Score: 184 bits (466), Expect = 6.75e-57 Identity = 109/169 (64.50%), Postives = 117/169 (69.23%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. ExPASy TrEMBL
Match: A0A0A0LSF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G132110 PE=4 SV=1) HSP 1 Score: 182 bits (463), Expect = 1.93e-56 Identity = 108/169 (63.91%), Postives = 117/169 (69.23%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. ExPASy TrEMBL
Match: A0A6J1I3L6 (uncharacterized protein LOC111469336 OS=Cucurbita maxima OX=3661 GN=LOC111469336 PE=4 SV=1) HSP 1 Score: 174 bits (442), Expect = 3.63e-53 Identity = 105/175 (60.00%), Postives = 117/175 (66.86%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 125.6 bits (314), Expect = 3.2e-29 Identity = 72/144 (50.00%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24 Identity = 62/143 (43.36%), Postives = 87/143 (60.84%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 107.8 bits (268), Expect = 6.8e-24 Identity = 67/137 (48.91%), Postives = 84/137 (61.31%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 99.0 bits (245), Expect = 3.2e-21 Identity = 61/128 (47.66%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of Cp4.1LG07g06740 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17 Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|