Cp4.1LG07g05720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g05720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG07: 4033688 .. 4035707 (-)
RNA-Seq Expression	Cp4.1LG07g05720
Synteny	Cp4.1LG07g05720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTTCATCATCATGTTGAGTTTGAGTTCATATATATTTCCTCACAATTTCAAAAGGGTTTCTCTAAAATCTCTTACAATTCTCTTATATCTACCAAATGTTTGGAATTGAAGAAGCTGATAATGGTAAGGACAAGCATGGGCTGCCACCAGGGTTTAGGTTTCACCCCACCGATGAAGAGCTCATTGTCTATTATCTTGCTTCAAAGACCTTCCAAGCTTCCAACTTTCATGGGGTTAGTATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGGTACTAATGAATTGTGCCATTTTTTCATATCAAAATCTGTTCTTTTTGGTTTCATTATGATTGTTTGTGTTTTCAGATGAGGCAAAGATGGGTGAAAAAGAGTGGTATTTCTTTAGCTTAAGAGTTAGGAAATACCCAACAGGGCTTAGAACCAACCGAGCTACGGTGGCTGGTTACTGGAAAGCCACCGGAAAAGATAGGCAAATTCATAGTGATTCCAATGGAGTGAAGCTTGGAACCAAGAAAACACTTGTGTTCTATAAAGGTGGTGCCCCTAGAGGACTCAAAACCAAGTGGGTTATGCATGAATATCGCCTCCACTCTGATCTCGCTTCCCGTAATGCTTGCAAGGTTACTATTAATTTATGTTTGTTAGAAATCACGACTCTCTATAATGGTATGATACTCTCCACTTTGAGTATAAGATCTCGTGGCTTTACTTTTGGTTTCCCCAAAAGAGATCATGCTAATGGAGATGTATTTCTTACTTATAAATCCATGATCAACCTGTTAATTAGTCGATGTGAGACTTCTCTCTCAACAATCCTCTCTTCGAGCAAAGTACACCATAGAGTATCCCCTGAGGCCTATGGAACTCTTGAACATTCTTCCCTTAATCGAGGCTTGACTCCTTCTCTGAAGCTCTCGAATAAAGTACACCCTTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGATACTCACAACTTCTTTGTTCGACACTTGAGGATTCTATAAGGGCATGACTCTGATACCATATTAGAAATCACGACTCTACATAGTGATATGATACTGTCCACTTTGAGTATAAGCTCTCGTGGCTTTGCTTTTGGTTTCCCAAAAGGTCTCGTACCAATGGAAATGTATTCCTTACTTATAAACTTATGATCAACCCTTAATTAGCACATGTGAGACTCCTCTCCCAACAATTCTCAACAATCTTTCCCTCGAACAAAGCACACCATAGAGTCTCCCCTAAGGCCCATGGACCTCTTGAACAGCCTCCCCTTAATCGAGGCTCAACTCCTTCTTTGGAGCTCTAACAAAGTACACTATTTGTTCGACACTTGAATCACTTTTGACTACACTTTCGAGCCTCACAGCTTCTTTGTTTGATACTTAGGATTCTATTGACAGGACTAAATTAAAGGCATAACTCTGATACCATGTTAGTAATTACAACTCTCTACAATAGTACGATAGTGTCCACTTTGAGTATAACCTCTCGTGACATTACTTTTGGTTTCTCCAAAAAAACTTCATATTAATAAAGATGTATTTCTTACTTATAAACTCAGGATCTCCCGATTAACCAAATCTTTGTGATTTCATGCAGGACGAGTGGGTTCTATGCAGAATAATACACAAATCCGGTGAGAAAATCAAACCCAGAAGATGTCTCCAAGCGTCTCCTTTGTCGGTTCCCTCTCCCGTATCTCTGCCTCCATTATTCTTGGACGAAGCTCAAACCATAGCCCACGACAACCTTCGACTCCAAGCGGCTCTGCAGAACCTTCAGCGCCACGAAAATGGCGTCGAGAGCTTCATCACGAACAACCCACATTTCATTTTCCAATCAACCCTCTTACCCTTTGGTTTAAACGTCGACACCCACTTGTCTCCGCCGTCGCTTCAAGGGACGACCAGCAGCACCGACACCCACTTGGTTGATGTTGGTGGGTATGCAGGTGGGCGTGGTGAGTGTGATGAAAATTGGTCGGGAGGGTGG

mRNA sequence

CCCCTTCATCATCATGTTGAGTTTGAGTTCATATATATTTCCTCACAATTTCAAAAGGGTTTCTCTAAAATCTCTTACAATTCTCTTATATCTACCAAATGTTTGGAATTGAAGAAGCTGATAATGGTAAGGACAAGCATGGGCTGCCACCAGGGTTTAGGTTTCACCCCACCGATGAAGAGCTCATTGTCTATTATCTTGCTTCAAAGACCTTCCAAGCTTCCAACTTTCATGGGGTTAGTATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGATGAGGCAAAGATGGGTGAAAAAGAGTGGTATTTCTTTAGCTTAAGAGTTAGGAAATACCCAACAGGGCTTAGAACCAACCGAGCTACGGTGGCTGGTTACTGGAAAGCCACCGGAAAAGATAGGCAAATTCATAGTGATTCCAATGGAGTGAAGCTTGGAACCAAGAAAACACTTGTGTTCTATAAAGGTGGTGCCCCTAGAGGACTCAAAACCAAAAGATGTCTCCAAGCGTCTCCTTTGTCGGTTCCCTCTCCCGTATCTCTGCCTCCATTATTCTTGGACGAAGCTCAAACCATAGCCCACGACAACCTTCGACTCCAAGCGGCTCTGCAGAACCTTCAGCGCCACGAAAATGGCGTCGAGAGCTTCATCACGAACAACCCACATTTCATTTTCCAATCAACCCTCTTACCCTTTGGTTTAAACGTCGACACCCACTTGTCTCCGCCGTCGCTTCAAGGGACGACCAGCAGCACCGACACCCACTTGGTTGATGTTGGTGGGTATGCAGGTGGGCGTGGTGAGTGTGATGAAAATTGGTCGGGAGGGTGG

Coding sequence (CDS)

ATGTTTGGAATTGAAGAAGCTGATAATGGTAAGGACAAGCATGGGCTGCCACCAGGGTTTAGGTTTCACCCCACCGATGAAGAGCTCATTGTCTATTATCTTGCTTCAAAGACCTTCCAAGCTTCCAACTTTCATGGGGTTAGTATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGATGAGGCAAAGATGGGTGAAAAAGAGTGGTATTTCTTTAGCTTAAGAGTTAGGAAATACCCAACAGGGCTTAGAACCAACCGAGCTACGGTGGCTGGTTACTGGAAAGCCACCGGAAAAGATAGGCAAATTCATAGTGATTCCAATGGAGTGAAGCTTGGAACCAAGAAAACACTTGTGTTCTATAAAGGTGGTGCCCCTAGAGGACTCAAAACCAAAAGATGTCTCCAAGCGTCTCCTTTGTCGGTTCCCTCTCCCGTATCTCTGCCTCCATTATTCTTGGACGAAGCTCAAACCATAGCCCACGACAACCTTCGACTCCAAGCGGCTCTGCAGAACCTTCAGCGCCACGAAAATGGCGTCGAGAGCTTCATCACGAACAACCCACATTTCATTTTCCAATCAACCCTCTTACCCTTTGGTTTAAACGTCGACACCCACTTGTCTCCGCCGTCGCTTCAAGGGACGACCAGCAGCACCGACACCCACTTGGTTGATGTTGGTGGGTATGCAGGTGGGCGTGGTGAGTGTGATGAAAATTGGTCGGGAGGGTGG

Protein sequence

MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAPRGLKTKRCLQASPLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLPFGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW

Homology

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.0e-51
Identity = 94/132 (71.21%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 5   EEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPD 64
           E A   +++ GLPPGFRFHPTDEELI +YLASK F      G+ I+EVDLNRCEPWELP+
Sbjct: 11  ELAGEERNERGLPPGFRFHPTDEELITFYLASKIFH-GGLSGIHISEVDLNRCEPWELPE 70

Query: 65  EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVF 124
            AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKD+++ S   G  +G KKTLVF
Sbjct: 71  MAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVF 130

Query: 125 YKGGAPRGLKTK 137
           YKG APRGLKTK
Sbjct: 131 YKGRAPRGLKTK 141

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 89/128 (69.53%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 8   DNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAK 67
           D+G D   LPPGFRFHPTDEELI +YL  K      F   +IAEVDLN+CEPW+LP  AK
Sbjct: 9   DHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGC-FSSRAIAEVDLNKCEPWQLPGRAK 68

Query: 68  MGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKG 127
           MGEKEWYFFSLR RKYPTGLRTNRAT AGYWKATGKDR+I S      +G KKTLVFYKG
Sbjct: 69  MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKG 128

Query: 128 GAPRGLKT 136
            AP+G K+
Sbjct: 129 RAPKGEKS 135

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 8.6e-46
Identity = 87/125 (69.60%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 11  KDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKMGE 70
           +D+  +PPGFRFHPTDEELI YYL  K    SNF   +I++VDLN+ EPWELP++AKMGE
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVLD-SNFSCAAISQVDLNKSEPWELPEKAKMGE 74

Query: 71  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAP 130
           KEWYFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I S      LG KKTLVFYKG AP
Sbjct: 75  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 134

Query: 131 RGLKT 136
           +G K+
Sbjct: 135 KGEKS 138

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy Swiss-Prot
Match: Q9FTY0 (NAC domain-containing protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC20 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.8e-43
Identity = 87/145 (60.00%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 16  LPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKM-GEKEWY 75
           LPPGFRFHPTDEE+I +YLA K   +  F   +I EVDLN+CEPW+LP +AKM GEKEWY
Sbjct: 14  LPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPGKAKMNGEKEWY 73

Query: 76  FFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAPRGLK 135
           F+  + RKYPTG+RTNRAT AGYWKATGKD++I  D + + +G KKTLVFYKG AP+G K
Sbjct: 74  FYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRDHH-MLIGMKKTLVFYKGRAPKGDK 133

Query: 136 TK------RCLQASPLSVPSPVSLP 154
           T       R   ASP   PS    P
Sbjct: 134 TNWVMHEYRLADASPPPPPSSAEPP 157

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy Swiss-Prot
Match: A2WQE4 (NAC domain-containing protein 26 OS=Oryza sativa subsp. indica OX=39946 GN=NAC26 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.9e-43
Identity = 84/140 (60.00%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 16  LPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKM-GEKEWY 75
           LPPGFRFHPTDEE+I +YLA K   +  F   +I EVDLN+CEPW+LP +AKM GEKEWY
Sbjct: 14  LPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPGKAKMNGEKEWY 73

Query: 76  FFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAPRGLK 135
           F+  + RKYPTG+RTNRAT AGYWKATGKD++I  + + + +G KKTLVFYKG AP+G K
Sbjct: 74  FYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRNHH-MLIGMKKTLVFYKGRAPKGDK 133

Query: 136 TKRCLQASPLSVPSPVSLPP 155
           T   +    L+  SP   PP
Sbjct: 134 TNWVMHEYRLADASPPQPPP 152

[Close]

BLAST of Cp4.1LG07g05720 vs. NCBI nr
Match: XP_023538246.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500 bits (1287), Expect = 6.73e-178
Identity = 248/286 (86.71%), Postives = 248/286 (86.71%), Query Frame = 0


Query: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60
           MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW
Sbjct: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60

Query: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120
           ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK
Sbjct: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120

Query: 121 TLVFYKGGAPRGLKTK--------------------------------------RCLQAS 180
           TLVFYKGGAPRGLKTK                                      RCLQAS
Sbjct: 121 TLVFYKGGAPRGLKTKWVMHEYRLHSDLASRNACKDEWVLCRIIHKSGEKIKPRRCLQAS 180

Query: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240
           PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP
Sbjct: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240

Query: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 248
           FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW
Sbjct: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 286

[Close]

BLAST of Cp4.1LG07g05720 vs. NCBI nr
Match: XP_022951225.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita moschata])

HSP 1 Score: 491 bits (1264), Expect = 2.16e-174
Identity = 241/286 (84.27%), Postives = 247/286 (86.36%), Query Frame = 0


Query: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60
           MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGV+IAEVDLNRCEPW
Sbjct: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVNIAEVDLNRCEPW 60

Query: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120
           ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK
Sbjct: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120

Query: 121 TLVFYKGGAPRGLKTK--------------------------------------RCLQAS 180
           TLVFYKGGAPRGLKTK                                      RCLQAS
Sbjct: 121 TLVFYKGGAPRGLKTKWVMHEYRLHSDLASRNACKDEWVLCRIIHKSGEKIKPRRCLQAS 180

Query: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240
           PLSVPSPVSLPPLFLDEAQT+AH+++R QAALQNLQRHENGVESFITNNPHFIFQSTLLP
Sbjct: 181 PLSVPSPVSLPPLFLDEAQTVAHNDIRFQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240

Query: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 248
           FGLN+DTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW
Sbjct: 241 FGLNLDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 286

[Close]

BLAST of Cp4.1LG07g05720 vs. NCBI nr
Match: XP_023002117.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita maxima])

HSP 1 Score: 487 bits (1253), Expect = 1.02e-172
Identity = 239/286 (83.57%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60
           MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGV+IAEVDLNRCEPW
Sbjct: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVNIAEVDLNRCEPW 60

Query: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120
           ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK
Sbjct: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120

Query: 121 TLVFYKGGAPRGLKTK--------------------------------------RCLQAS 180
           TLVFYKGGAPRGLKTK                                      RCLQ S
Sbjct: 121 TLVFYKGGAPRGLKTKWVMHEYRLHSDLASRNACKDEWVLCRIIHKSCEKIKPRRCLQES 180

Query: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240
           PLSVPSPVSLPPLF DEAQT+AH+++R QAALQNLQRHENGVESFITNNPHFIFQSTLLP
Sbjct: 181 PLSVPSPVSLPPLFSDEAQTVAHNDIRFQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240

Query: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 248
           FGLN+DTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW
Sbjct: 241 FGLNLDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 286

[Close]

BLAST of Cp4.1LG07g05720 vs. NCBI nr
Match: KAG6585796.1 (Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405 bits (1042), Expect = 4.55e-141
Identity = 208/286 (72.73%), Postives = 214/286 (74.83%), Query Frame = 0


Query: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60
           M GIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGV+IAEVDLNRCEPW
Sbjct: 1   MLGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVNIAEVDLNRCEPW 60

Query: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120
           ELPDEAKMGEKEW                                QIHSDSNGVKLGTKK
Sbjct: 61  ELPDEAKMGEKEW--------------------------------QIHSDSNGVKLGTKK 120

Query: 121 TLVFYKGGAPRGLKTK--------------------------------------RCLQAS 180
           TLVFYKGGAPRGLKTK                                      RCLQAS
Sbjct: 121 TLVFYKGGAPRGLKTKWVMHEYRLHSDLASRNACKDEWVLCRIIHKSGEKIKPRRCLQAS 180

Query: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240
           PLSVPSPVSLPPLFLDEAQT+AH+++R QAALQNLQRHENGVESFITNNPHFIFQSTLLP
Sbjct: 181 PLSVPSPVSLPPLFLDEAQTVAHNDIRFQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240

Query: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 248
           FGLN+DTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW
Sbjct: 241 FGLNLDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 254

[Close]

BLAST of Cp4.1LG07g05720 vs. NCBI nr
Match: XP_023546040.1 (protein CUP-SHAPED COTYLEDON 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374 bits (960), Expect = 1.90e-127
Identity = 198/328 (60.37%), Postives = 216/328 (65.85%), Query Frame = 0


Query: 1   MFGIEE---------ADNGKDKHGL-PPGFRFHPTDEELIVYYLASKTFQASNFHGVSIA 60
           MFGIEE         ADN K++H L PPGFRFHPTDEELI +YLASK F+ SNFHGV+IA
Sbjct: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSD 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHS 
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGLKTKRCL------------------------------- 180
           SNGVKLGTKKTLVFYKGGAPRG KTK  +                               
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPNACKDEWVLCRIIHKSGEK 180

Query: 181 --------------QASPLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVE 240
                         ++SPLSVPSP+S PPL LD +QTI H+N+RLQAAL NL RHENG++
Sbjct: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLD 240

Query: 241 SFITNNPHFIFQSTLLPFGLNVDTHLSPPSLQGTTSSTDTH------------------- 247
           SF  NNPHF+FQ    PFGLN+DTH  PPS+QGT +    H                   
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASS 300

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy TrEMBL
Match: A0A6J1GI54 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC111454129 PE=4 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 1.04e-174
Identity = 241/286 (84.27%), Postives = 247/286 (86.36%), Query Frame = 0


Query: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60
           MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGV+IAEVDLNRCEPW
Sbjct: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVNIAEVDLNRCEPW 60

Query: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120
           ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK
Sbjct: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120

Query: 121 TLVFYKGGAPRGLKTK--------------------------------------RCLQAS 180
           TLVFYKGGAPRGLKTK                                      RCLQAS
Sbjct: 121 TLVFYKGGAPRGLKTKWVMHEYRLHSDLASRNACKDEWVLCRIIHKSGEKIKPRRCLQAS 180

Query: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240
           PLSVPSPVSLPPLFLDEAQT+AH+++R QAALQNLQRHENGVESFITNNPHFIFQSTLLP
Sbjct: 181 PLSVPSPVSLPPLFLDEAQTVAHNDIRFQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240

Query: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 248
           FGLN+DTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW
Sbjct: 241 FGLNLDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 286

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy TrEMBL
Match: A0A6J1KIK5 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496076 PE=4 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 4.96e-173
Identity = 239/286 (83.57%), Postives = 245/286 (85.66%), Query Frame = 0


Query: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPW 60
           MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGV+IAEVDLNRCEPW
Sbjct: 1   MFGIEEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVNIAEVDLNRCEPW 60

Query: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120
           ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK
Sbjct: 61  ELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKK 120

Query: 121 TLVFYKGGAPRGLKTK--------------------------------------RCLQAS 180
           TLVFYKGGAPRGLKTK                                      RCLQ S
Sbjct: 121 TLVFYKGGAPRGLKTKWVMHEYRLHSDLASRNACKDEWVLCRIIHKSCEKIKPRRCLQES 180

Query: 181 PLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240
           PLSVPSPVSLPPLF DEAQT+AH+++R QAALQNLQRHENGVESFITNNPHFIFQSTLLP
Sbjct: 181 PLSVPSPVSLPPLFSDEAQTVAHNDIRFQAALQNLQRHENGVESFITNNPHFIFQSTLLP 240

Query: 241 FGLNVDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 248
           FGLN+DTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW
Sbjct: 241 FGLNLDTHLSPPSLQGTTSSTDTHLVDVGGYAGGRGECDENWSGGW 286

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy TrEMBL
Match: A0A6J1G3P2 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450457 PE=4 SV=1)

HSP 1 Score: 372 bits (956), Expect = 3.74e-127
Identity = 198/328 (60.37%), Postives = 215/328 (65.55%), Query Frame = 0


Query: 1   MFGIEE---------ADNGKDKHGL-PPGFRFHPTDEELIVYYLASKTFQASNFHGVSIA 60
           MFGIEE         ADN K++H L PPGFRFHPTDEELI +YLASK F+ SNFHGV+IA
Sbjct: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSD 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHS 
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGLKTKRCL------------------------------- 180
           SNGVKLGTKKTLVFYKGGAPRG KTK  +                               
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPNACKDEWVLCRIIHKSGEK 180

Query: 181 --------------QASPLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVE 240
                         ++SPLSVPSP+S PPL LD  QTI H+N+RLQAAL NL RHENG++
Sbjct: 181 TKPRSFQPQQTCHQESSPLSVPSPISPPPLLLDTPQTIDHNNIRLQAALHNLHRHENGLD 240

Query: 241 SFITNNPHFIFQSTLLPFGLNVDTHLSPPSLQGTTSSTDTH------------------- 247
           SF  NNPHF+FQ    PFGLN+DTH  PPS+QGT +    H                   
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHFWPPSIQGTNTHFQGHFNPQLLFEGGGGGSQEASS 300

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy TrEMBL
Match: A0A6J1KBM6 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493995 PE=4 SV=1)

HSP 1 Score: 369 bits (948), Expect = 6.15e-126
Identity = 199/328 (60.67%), Postives = 213/328 (64.94%), Query Frame = 0


Query: 1   MFGIEE---------ADNGKDKHGL-PPGFRFHPTDEELIVYYLASKTFQASNFHGVSIA 60
           MFGIEE         ADN K KH L PPGFRFHPTDEELI +YLASK F+ SNFHGV+IA
Sbjct: 1   MFGIEEVIDELNGEEADNAKQKHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSD 120
           EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHS 
Sbjct: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGLKTKRCL------------------------------- 180
           SNGVKLGTKKTLVFYKGGAPRG KTK  +                               
Sbjct: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRLHSDLASPTACKDEWVLCRIIHKSGEK 180

Query: 181 --------------QASPLSVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENGVE 240
                         ++SPLSVPS +S PPL LD  QTI H+N RLQAAL NL RHENG++
Sbjct: 181 TKPRSFQPQQTCHQESSPLSVPSTISPPPLLLDTPQTIDHNNNRLQAALHNLYRHENGLD 240

Query: 241 SFITNNPHFIFQSTLLPFGLNVDTHLSPPSLQGTTSSTDTH------------------- 247
           SF  NNPHF+FQ    PFGLN+DTHL PPS+QGT +    H                   
Sbjct: 241 SFNMNNPHFMFQPNPFPFGLNLDTHLWPPSIQGTNTDFQGHFNPQLLFDCDGGGSREASS 300

[Close]

BLAST of Cp4.1LG07g05720 vs. ExPASy TrEMBL
Match: A0A5A7TVZ6 (Protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00010 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 1.40e-107
Identity = 187/337 (55.49%), Postives = 210/337 (62.31%), Query Frame = 0


Query: 1   MFGIEE--------------ADNGKD----KHG--LPPGFRFHPTDEELIVYYLASKTFQ 60
           MFGIEE              +DNGK+    KH   LPPG+RFHPTDEELI +YLASK F+
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  ASNFH-GVSIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
            SNF  GV+IAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSDSNGVKLGTKKTLVFYKGGAPRGLKTKRCLQ--------ASPL------- 180
           ATGKDRQIHS  NGVKLGTKKTLVFYKGGAPRG+KTK  +         ASP        
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 ---------------------SVPSPVSLPPLFLDEAQTIAHDNLRLQAALQNLQRHENG 240
                                ++PSP+SLP L L+  Q+I H+N++ Q    N+Q HENG
Sbjct: 181 LCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQSINHNNIQFQPPPHNIQHHENG 240

Query: 241 VESFITNNPHFIFQSTLLPFGL-NVDTHLS-----PPSLQGTTSSTDTH----------- 247
           +ESFI NNPHFIFQ  L  FGL N DTHLS     PPS+Q T ++   H           
Sbjct: 241 LESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHFNPSLLLDGGC 300

[Close]

BLAST of Cp4.1LG07g05720 vs. TAIR 10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-52
Identity = 94/132 (71.21%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 5   EEADNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPD 64
           E A   +++ GLPPGFRFHPTDEELI +YLASK F      G+ I+EVDLNRCEPWELP+
Sbjct: 11  ELAGEERNERGLPPGFRFHPTDEELITFYLASKIFH-GGLSGIHISEVDLNRCEPWELPE 70

Query: 65  EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVF 124
            AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKD+++ S   G  +G KKTLVF
Sbjct: 71  MAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVF 130

Query: 125 YKGGAPRGLKTK 137
           YKG APRGLKTK
Sbjct: 131 YKGRAPRGLKTK 141

[Close]

BLAST of Cp4.1LG07g05720 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-47
Identity = 89/128 (69.53%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 8   DNGKDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAK 67
           D+G D   LPPGFRFHPTDEELI +YL  K      F   +IAEVDLN+CEPW+LP  AK
Sbjct: 9   DHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGC-FSSRAIAEVDLNKCEPWQLPGRAK 68

Query: 68  MGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKG 127
           MGEKEWYFFSLR RKYPTGLRTNRAT AGYWKATGKDR+I S      +G KKTLVFYKG
Sbjct: 69  MGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKG 128

Query: 128 GAPRGLKT 136
            AP+G K+
Sbjct: 129 RAPKGEKS 135

[Close]

BLAST of Cp4.1LG07g05720 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 6.1e-47
Identity = 87/125 (69.60%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 11  KDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKMGE 70
           +D+  +PPGFRFHPTDEELI YYL  K    SNF   +I++VDLN+ EPWELP++AKMGE
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVLD-SNFSCAAISQVDLNKSEPWELPEKAKMGE 74

Query: 71  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAP 130
           KEWYFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I S      LG KKTLVFYKG AP
Sbjct: 75  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 134

Query: 131 RGLKT 136
           +G K+
Sbjct: 135 KGEKS 138

[Close]

BLAST of Cp4.1LG07g05720 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 181.8 bits (460), Expect = 6.7e-46
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 11  KDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKMGE 70
           K++  LPPGFRFHPTDEELI YYL +K     NF G +IA+VDLN+ EPWELP++AKMG 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNK-IADQNFTGKAIADVDLNKSEPWELPEKAKMGG 70

Query: 71  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAP 130
           KEWYFFSLR RKYPTG+RTNRAT  GYWK TGKD++I + +    +G KKTLVFY+G AP
Sbjct: 71  KEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAP 130

Query: 131 RGLKT 136
           RG KT
Sbjct: 131 RGEKT 134

[Close]

BLAST of Cp4.1LG07g05720 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 181.8 bits (460), Expect = 6.7e-46
Identity = 84/125 (67.20%), Postives = 99/125 (79.20%), Query Frame = 0


Query: 11  KDKHGLPPGFRFHPTDEELIVYYLASKTFQASNFHGVSIAEVDLNRCEPWELPDEAKMGE 70
           K++  LPPGFRFHPTDEELI YYL +K     NF G +IA+VDLN+ EPWELP++AKMG 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNK-IADQNFTGKAIADVDLNKSEPWELPEKAKMGG 70

Query: 71  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSDSNGVKLGTKKTLVFYKGGAP 130
           KEWYFFSLR RKYPTG+RTNRAT  GYWK TGKD++I + +    +G KKTLVFY+G AP
Sbjct: 71  KEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAP 130

Query: 131 RGLKT 136
           RG KT
Sbjct: 131 RGEKT 134

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g05720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S851	3.0e-51	71.21	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV...	[more]
O04017	1.7e-46	69.53	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
Q9FRV4	8.6e-46	69.60	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
Q9FTY0	6.8e-43	60.00	NAC domain-containing protein 20 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]
A2WQE4	8.9e-43	60.00	NAC domain-containing protein 26 OS=Oryza sativa subsp. indica OX=39946 GN=NAC26...	[more]

BLAST of Cp4.1LG07g05720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538246.1	6.73e-178	86.71	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951225.1	2.16e-174	84.27	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita moschata]	[more]
XP_023002117.1	1.02e-172	83.57	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita maxima]	[more]
KAG6585796.1	4.55e-141	72.73	Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546040.1	1.90e-127	60.37	protein CUP-SHAPED COTYLEDON 3-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG07g05720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI54	1.04e-174	84.27	protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145412...	[more]
A0A6J1KIK5	4.96e-173	83.57	protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496076 ...	[more]
A0A6J1G3P2	3.74e-127	60.37	protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145045...	[more]
A0A6J1KBM6	6.15e-126	60.67	protein CUP-SHAPED COTYLEDON 3-like OS=Cucurbita maxima OX=3661 GN=LOC111493995 ...	[more]
A0A5A7TVZ6	1.40e-107	55.49	Protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Cp4.1LG07g05720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76420.1	2.2e-52	71.21	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G53950.1	1.2e-47	69.53	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15170.1	6.1e-47	69.60	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT2G24430.1	6.7e-46	67.20	NAC domain containing protein 38	[more]
AT2G24430.2	6.7e-46	67.20	NAC domain containing protein 38	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 17..135 e-value: 3.7E-31 score: 108.7
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 16..176 score: 43.020439
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 25..143 e-value: 1.5E-38 score: 134.0
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 11..136
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 10..139
None	No IPR available	PANTHER	PTHR31744:SF86	PROTEIN CUP-SHAPED COTYLEDON 3	coord: 10..139

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g05720.1	Cp4.1LG07g05720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding