Cp4.1LG07g05700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g05700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RNA-binding protein 24-B-like
Location	Cp4.1LG07: 4056858 .. 4064008 (-)
RNA-Seq Expression	Cp4.1LG07g05700
Synteny	Cp4.1LG07g05700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGGAGTATCTGAATGGAAATCCCGTAAGATTCGAGGGGCCGTCAATCAAACAAAAGAAAACAGCGACGATGAAGAAGCAAATTCTCAGCCCTTTCCTTCCCCCCTCCTTGTGTTTTTCCTCCGCCGCCGCCTCCTCCCCCTCCCTCTCCTCTCCGCCGCCACCGCCGCCTTCTCCTCCGTATCTGTATTATCCATTACTTTAATCCTAATACTCCTTCCCGATTCCGTTTTCTTCTTCCCTGCTTTTCCCTGTACAGCTCTATCAAACCCGCCTTCTTCCTACACTCCCTGGATCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCCTGTCTGGCCCATCTCATCCCCCTTTCTTTCTCATTTTATTTCTAGGGTTTCCATTTCCAATTATGATCACTCTTGTTCGCTTTGATCATTCCTCTTCTGCCTTACTTTCCCTCTTTCCTCTTTTCTTCCCCTTTCAATCCCTTTCACTTTTCTCCTGATTCTCTCTGTATATTCCCTCAATTTCTCAAGGGTTTTCCTAGGGGTTTGCTTCTGCTATGTGGGTTTCTCTCTAATTCACCAATTCTCCACCACTTCATTCAATCCTACTTACCCTTTGTGTCTCTGTTTATATTGTATACTGGGTGTTCATTTCTTTTGATTTCTCCACTGATAATGGCTTATCAGCATATTCCGGTTCCTAGTTCCGTTTCTGGATCAACTTCCAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACTTATACCAAGGTCTTCGTTGGTGGCTTGGCTTGGGAGACTCAGAGCGACACTATGAGGCACTACTTTCAGCAGTTTGGGGAGATTCTTGAAGCCGTTGTTATAACGGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGAGTATTAATGGTTTTTTTTCTTTTTACTCTAATGGGGTTTTTGTCAACTTTATACTTTTAATTTCTACTTTCTAAAAGTAATAGCCTAAGAGCAGTCGTTTTACACGTTTTTTTCTATCACGGTTGATCACAAATATTTATATTCTTGACGTTAGATTGACCTGAACGTTTGTTCCTGTTTACTTGGAGGGCTTTAGGTGACTTTCCGGGATCCAGAGTCAGCTAGAAGAGCTTGCTCAGATCCTACTCCAATTATTGATGGCAGGCGAGCCAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGTATTATTTGCTTATTTGGCTTTTTATTGTTTAAGCAAATCACATTGGCAGTTCTTGTCGTGCGTGATTGTATGATCAGTGATTTTTCCTGGTATGTGCTTTTTGAAGCTCTGGATTGATGAGTCTTTATTTCTGCTCTGTTGATTCTTACAGGACGTTTTAGACCGCCTGCAGTCTATGTTGGAGGAATGCAACCCAACAGGGGAGCTTATATTGGAAATTTTGGCTACCAACAACCGGTTTCTTATCCTTATCAGCAGGGACTTGCATATCCTCCTTATAGGTGTGTCCCTGAGGTTTCTCTTTGTGCATCCAAGCCTGCCAAGCCTGCCATTACAGTTTAATTTCATTATTTTGTTTGACTCAGATTTCTTGCTTTTTGCTATATCACGACCTTTACATCTTGTGATATGACTCGTGGAGCTTGGCTTGCTTTCAAAATTTTGAAGTTATGAGATTTTTGGTTATTTTTCTTCTCTATTTGTCATCAAGTCTTATAGGAAATGAAAGATGTTGTAAGATGTTGGATCATATATGCTAGCGTTCTTCGTTTCTTAAGATAGCTGAGGGTCGTCACTTGGCTGGTGTACATCTTCTGCAATGCTTTTTTAATGTTAGCATTTTAAGCACAAGAGGTAATATTACCAATCACACCGTGCAACATTCATTAGGATATGTTACACTGACGCCTCCTAGAAATCAGGATTGATTATATCCTGATCAGTGATATGACACAGTGTGATTGATAATTGCAGGAATACCATAGTAGGTATTTGAGGATATGTGCCAAGACTAATGTAATTGAACGCGAAGAAGCATGGCTAGAATTATTGGAGATGTCCCATTTCTTGTTTTCCCTCGCATTTATGTTTCTGTGAGAAGTCAAGTTGGTAGGATATGATACTCTGGTCTCTATTAATTGGGATACTGGATTCTGAATACTTGTCTTCTGGTATCACATTGGACTGCTGGTTGTAAATTGATTTCCTCCCATGAAAGTTTGCACCGTCGAAACATTTTTAATATTTTCGATCATTTGTTTTCTGTGCAGTTATGCTACTTATGGACCTGAGTATGTCTACCCACAGGTATCACTATTGCTTTATTTTTTCTTGTGTGTACAATTCATTTTGCGGAGGGTGGAAGTAGGGTAGGGTGATATGCAGGGCATCTTTAAAGTTTCTTATGGTTTTTGTTAGCTCTAGCATAATATGCTCATTGGCTCTGATTTTATGTGTCTTTATTTTTTTGTTTGGGTGGATGCAACCGTTGTGTGGGTCAGCAATACCTGCAGATTTATGGGGTGCCTGGGTCAGCAAGCCCTACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGATATGGAGCCGTACACGGATATGGAATGCCAAGCCCTCAGATCGTGCAGTTTAGTGGTCCTAATGTTAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCACCATATCCTTCAGGTATTTTGCCTTGTATGCAGATTATTCTTTGATATTGTAATGTGGAGATAACTCTTGATTGCTAAGGGGCTAAAATATGAGTTTAGTCTAGTCTCTTTAGGTATTTTTCTTTGAATTTGTATTTTTATTGCCATTAATTGGAACTCTTGTGTAATTGTGTAGTTTTCTTGGTCTCACTTTTGGTTTGGCCCATTGGTATTTTTTTTAAGGCCATTTTTTGTTTCTTTCTTTCATTTATTTTTGGAAGTTCCTTTTTCTTAAATCTAAAAGAGGTGTCTTGGTCAACTTTTGTACAATTGTTCATTGGCTTAGTTATGTGGTGAATAACACTTGATAGAATTCTCTAAGTTTCTCTACATTGAAACGTCACCATCTTGTAAAGAGATGTGAGATCCCACGTCAGTTGGGGAGGAGAACGAAACATTATATATAAGGGCGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAAATCTAAAGGGAAAGCCCAAAAAGGATAATATCTAGTAGCAGTGGAATTGGACTGTTACAAATGGTATCAGAGCCAAACACTGGGCGATGTGCCAGCGAGGAGGCTGAACCCCAAAAGGGGTGGACACAAGGTGGTGTGCCAGCAAGGACGCTGGGCCCCCAAGGGGGGTGGATTGGGGGGTCCACATCGATTGGAGAAGGGAACGAGTGTCAATGAGAACGTTGGGTCCCAAAGGGGGTGGATTGTGAGATCCCACATCAGTTGGGGAGGAGAACAAAGCATTCTTTATAATAAGGGTGTGACGCATTTTAAAAACCTTAAGGGAAAGCCTGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGGCTTGAGCTAAGAGAGAACTGAAAACTGGATATCTTATGGGGACACAGGATTATTTTTCCTTTTTGATTTTTTGCTGTGAAAACTTCTTTTATTTGAGACTAAAGAAAGTGCAACCTAAGGTGCATGGGGATATTGAAATCAGAACTGAAGGACAACTGGATAAGGATCTACGGGGGCAAATGATGAGGAAAAGTTTGTTTTACGACAGAACAAAGAGGATATAATATATCAAGATATCTTTGTTGCTTAATGCAATTTAGGCCACATTTCTATTCGTTTTACACGTGCCATGTTTTTAATCTGGTGATGAATGAGGGAAAACTAAGGTAACATGCTTTAACATGTTAGATATGCTTGATTAGGAAAACGTGTTTGTTTCATCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTGAGGAGTTGATCAGGTAAGCAGCAAATTTTGCAGTTAATATTTGAAACTTCATTCCCTATTTTTATCACCAGCTGTCTAACCACCTGAAATTTAACTACATTCATAGGTATCCATAGATTGCAGCAGGACTTAGAGCAGCGGAGCTGCTACATGAGTGGCGGGCTTCGGATCTAACCTTGCAAATAATTTATCATGCATTCTAGAGGTAGTCTTATGCTCAATGCACAGCTTTTACGAAATTTTCATATGGTCAGGATGATGACTATTTGAAAGTTTATCGTAAAATCATTGCGACAATTTCTTTGCTTTCGTATCTTATTTCATATAGATTATATAGCAGCCACAATTCTGGAATACGAGTCAAATACTAAGGGAACAACTAATTTGTGGGGAGTCTAAAGTCGATTGGCCGCCTCAATTCTCCTGTTTTAGTTTGTGTGTGGTAGTTGAGGAATGAAGTTGGTAGAATTGAAGATGTGAATGGATGCTCATAAGAAAGAGAGTGTAGAATGTCTGAAAATGACATGACTGTTTGGTTTGAACTATATAGTACTGGGAATTATATCTACAAATATATTCCCTGGGTTAGCGGATGAGTTAAAATACATTTACTGTTTCCAAATATACCCTCTAAGCTGTCTGAGTGGATAGGAAATGAAAGATGTATGGAAATTTACCTTGTTCATTCTCATACAGCTGAGTTTTAGGCCTTACCTAGGAAATCTTGAAGTCGTGTCCATTACGGAAAGAGTGATATAAACAAAGGAATGGAAACTCGTGCTCGCTGTAATCTTCCCAAGACTCCAAATAAATTGGAATACGAGAATGAGTTAAGTTGATAATTTTTATTACACCTAGCTTAGCATCTTTCTGATGTACTTGTATATATGTGCATATAAACTTTTGTGGTTCTCTTTTAATTTGTGCTTTTAGAATATCTCGTTGGAATTAGGGGTATGTGAGATTTCCAACTGTATGTAATATATTTAGATAGAGACATTGGATCAAAAAGACACAAGTAATACCTTTACTTTATGGAAAATAAGAAGAAGCACGGGTAGAACGATGGGAGAAAAACCCCTCCCAACAAGGATCTTGGTAAAATAAACGCTCTTTCCTCTCTCCTTTTCTCCCCTCATCCTCCTGGTTTTTTAGCCTCCATTTGCCGTCGGAGTTTGTTTTTTCATTTTTCCAGATTAGGTTCTTAGTTTTAAGGCCCATTTTTTGAATTCTCAGCTGATTGGTATTGGTTAGCATCTTTCTCTCATCATGGAAGTCAAACTTTTGTTGAAAATGTTACATTTAAACAACCATTCCCTTTTTCCATGTCCCATCTTGGTTGGTTTGGATTGATTCTAAATTTCTCAAGGAAGGTAGAGATTCCTTTGGTACTTCTCGTTTATCTAAGTTCAAGTCTCAACCAGGATGGTTTACTAAATGCGTTGTTTGACCTCTAAACATGGGTAGGAAGAAACTCCGTGTTGGATCAAATATGAAAGAATGACTAGATTTTTGGGAAATAATATGAAACATGGGTAGCAAGCTCGCCAACACGTGTTGGACCAAATAAGAAGCGTAAAGAAGTTCTTAAGGTGTTTTCATTACCAAGAAGACTTTTATTGTCTATATTTGAGAGCTGCTGCTTTTGCACTAATTCCATGGAATTTAATTATTATCGTTCATCCACCTATTTATTCTTTTAGGGGTTGTCGTGTTTCTTCTTATATAGTCTCATGGTGCATTCCTTTGTGTCTTGGTTGTTGAAGCCTCCTTTATGAAGTCAAATTCCGCTTTTATGAACAAACATTCAGCTTGGATTGCACACAGAATTGATCTGTCATGAAATAGTGCTTTATAGAGTAGAATTCTTCAAAAGAATTCAGAGATTCTTCTCTAATATAAACAAAAGTGAAATAGTATGACAGGCTTTCCGGAAAATGAAACGAAACCCGCTTGATCGATATGAAAAAGGCTGAACAATACTTGCTTCACCATAGTAAAAGTTAAAGCAGCAGATTTAGAAAGACCTCCTTAGTTTTCTCAAGTTTCTCAAAATGGTGGCTCAATAATAGTCACTTTTTTTTTTTAATAGGAGTGTGTTCTGTTAGGTTTATGAGAAGTTCTTCATGGTTGTCTTCGGTGTTTTTAATTTTTTTTTCACTCCCTTTGGGTGTTTGTATCTCTTAAACTTTTAATCCTTATCATTATATCAAATGAGAAGTCGTCCCAATGAACACGTTTATTTATGATGCGAACTCTATACCGTAGAATGTTAGCAAATTGCACTCCTCCCCCTCTCGCATCCACCCCATGACATTTATTTTCTGGAAGTTGAATATCGATCGACTTGTAAACATGAACATATATTGCTTTCCATTGTTTGCAGTTGATCTAAAAGTGTTCTGGTACTTAACTGCTGCAGGTCATTGTCATGCTCACCAGAGACGCCAGATGGTCTTGAGTCGCTCCAAATGGTGGAGAAGGAATATGGAAGACCTTTCTTCTTCCCCAGTGTTTATAAACTTTTACACGCTACCGACGCTCTGGAGAGTGGTAGGTAGTCGTCATGGATTGATTGACGGGTGCTTGAATCGGGTTTAAGCATCTACTTAGGAATAAAAACTTGTAAAAAGAAGTCAAAATTAGAATCAATATATGATTCTTTCATAGTAAACTCCCAGCATTTTGGGTGTATAGGAAGAAGTCTGTGGTGCTTTGTGTGGTTAGTGGGTCTATCATCATCTTGGAACTAATATATGATTTCACAAGTTCATGTGCATATTAGTTATATATATAAGCATTTATTGTAATTTGGATTTGTTTTGAGGCCTGACTTCATAAGAACGAAGCAGCTTCAGGTTCTATCCAATCTAGAAGATTGAATTGCTGATTTTTCATTTTAGTACCCGTTGATGGCGCGTCGGGTTGAGATTGGCTGCATCGAAGGATATTATCGAGTACTTAGTTCATCCTTTGTGTTCATCTTTTCTTCCATAAAATGACTTTTTTAGGTCCAATCTTGTGATGATGAGAGATGGAATTAGATGAGTTTTTGTTGATTCCTTTTAATTGCTTTATAAGCAGTCAATTCTCAACCAATTATAGTTGGATTTGGCCAATC

mRNA sequence

TGTGGAGTATCTGAATGGAAATCCCGTAAGATTCGAGGGGCCGTCAATCAAACAAAAGAAAACAGCGACGATGAAGAAGCAAATTCTCAGCCCTTTCCTTCCCCCCTCCTTGTGTTTTTCCTCCGCCGCCGCCTCCTCCCCCTCCCTCTCCTCTCCGCCGCCACCGCCGCCTTCTCCTCCGTATCTGTATTATCCATTACTTTAATCCTAATACTCCTTCCCGATTCCGTTTTCTTCTTCCCTGCTTTTCCCTGTACAGCTCTATCAAACCCGCCTTCTTCCTACACTCCCTGGATCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCCTGTCTGGCCCATCTCATCCCCCTTTCTTTCTCATTTTATTTCTAGGGTTTCCATTTCCAATTATGATCACTCTTGTTCGCTTTGATCATTCCTCTTCTGCCTTACTTTCCCTCTTTCCTCTTTTCTTCCCCTTTCAATCCCTTTCACTTTTCTCCTGATTCTCTCTGTATATTCCCTCAATTTCTCAAGGGTTTTCCTAGGGGTTTGCTTCTGCTATGTGGGTTTCTCTCTAATTCACCAATTCTCCACCACTTCATTCAATCCTACTTACCCTTTGTGTCTCTGTTTATATTGTATACTGGGTGTTCATTTCTTTTGATTTCTCCACTGATAATGGCTTATCAGCATATTCCGGTTCCTAGTTCCGTTTCTGGATCAACTTCCAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACTTATACCAAGGTCTTCGTTGGTGGCTTGGCTTGGGAGACTCAGAGCGACACTATGAGGCACTACTTTCAGCAGTTTGGGGAGATTCTTGAAGCCGTTGTTATAACGGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGACTTTCCGGGATCCAGAGTCAGCTAGAAGAGCTTGCTCAGATCCTACTCCAATTATTGATGGCAGGCGAGCCAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGACGTTTTAGACCGCCTGCAGTCTATGTTGGAGGAATGCAACCCAACAGGGGAGCTTATATTGGAAATTTTGGCTACCAACAACCGGTTTCTTATCCTTATCAGCAGGGACTTGCATATCCTCCTTATAGTTATGCTACTTATGGACCTGAGTATGTCTACCCACAGCAATACCTGCAGATTTATGGGGTGCCTGGGTCAGCAAGCCCTACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGATATGGAGCCGTACACGGATATGGAATGCCAAGCCCTCAGATCGTGCAGTTTAGTGGTCCTAATGTTAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTCATTGTCATGCTCACCAGAGACGCCAGATGGTCTTGAGTCGCTCCAAATGGTGGAGAAGGAATATGGAAGACCTTTCTTCTTCCCCAGTGTTTATAAACTTTTACACGCTACCGACGCTCTGGAGAGTGGTAGGTAGTCGTCATGGATTGATTGACGGGTGCTTGAATCGGGTTTAAGCATCTACTTAGGAATAAAAACTTGTAAAAAGAAGTCAAAATTAGAATCAATATATGATTCTTTCATAGTAAACTCCCAGCATTTTGGGTGTATAGGAAGAAGTCTGTGGTGCTTTGTGTGGTTAGTGGGTCTATCATCATCTTGGAACTAATATATGATTTCACAAGTTCATGTGCATATTAGTTATATATATAAGCATTTATTGTAATTTGGATTTGTTTTGAGGCCTGACTTCATAAGAACGAAGCAGCTTCAGGTTCTATCCAATCTAGAAGATTGAATTGCTGATTTTTCATTTTAGTACCCGTTGATGGCGCGTCGGGTTGAGATTGGCTGCATCGAAGGATATTATCGAGTACTTAGTTCATCCTTTGTGTTCATCTTTTCTTCCATAAAATGACTTTTTTAGGTCCAATCTTGTGATGATGAGAGATGGAATTAGATGAGTTTTTGTTGATTCCTTTTAATTGCTTTATAAGCAGTCAATTCTCAACCAATTATAGTTGGATTTGGCCAATC

Coding sequence (CDS)

ATGGCTTATCAGCATATTCCGGTTCCTAGTTCCGTTTCTGGATCAACTTCCAGTTCTGGGTTCTTGAACTCTCCCTTTGGTGATACCACTTATACCAAGGTCTTCGTTGGTGGCTTGGCTTGGGAGACTCAGAGCGACACTATGAGGCACTACTTTCAGCAGTTTGGGGAGATTCTTGAAGCCGTTGTTATAACGGATAAGAATACAGGGAGATCCAAAGGATATGGTTTCGTGACTTTCCGGGATCCAGAGTCAGCTAGAAGAGCTTGCTCAGATCCTACTCCAATTATTGATGGCAGGCGAGCCAATTGTAATCTGGCTTCACTTGGCCGGCCTCGGCCACCTATATCTTATGGACGTTTTAGACCGCCTGCAGTCTATGTTGGAGGAATGCAACCCAACAGGGGAGCTTATATTGGAAATTTTGGCTACCAACAACCGGTTTCTTATCCTTATCAGCAGGGACTTGCATATCCTCCTTATAGTTATGCTACTTATGGACCTGAGTATGTCTACCCACAGCAATACCTGCAGATTTATGGGGTGCCTGGGTCAGCAAGCCCTACTATTTATCATTATGGACAATTAGGTCAAACAGTCCCTGGTGGTCATGGATATGGAGCCGTACACGGATATGGAATGCCAAGCCCTCAGATCGTGCAGTTTAGTGGTCCTAATGTTAATGCATTAACATCTTCTCCAATGCCTACAATTCAGGCACCATATCCTTCAGGGATTCCAGCACCTGTTGCAGCACAACCACAGTTCGTTGTTCATTCTCCTTCTCAGTTTGTACAAGGTAGCGGTTCTGACCAAACATCTGGGTCATTGTCATGCTCACCAGAGACGCCAGATGGTCTTGAGTCGCTCCAAATGGTGGAGAAGGAATATGGAAGACCTTTCTTCTTCCCCAGTGTTTATAAACTTTTACACGCTACCGACGCTCTGGAGAGTGGTAGGTAG

Protein sequence

MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGRFRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSGSLSCSPETPDGLESLQMVEKEYGRPFFFPSVYKLLHATDALESGR

Homology

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BLAST of Cp4.1LG07g05700 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 102/259 (39.38%), Postives = 128/259 (49.42%), Query Frame = 0


Query: 17  SSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYG 76
           ++S  +N  FGDT  TKVFVGGLAW+T  + M  +F ++G+ILEAV+I+DK T RSKGYG
Sbjct: 2   TTSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYG 61

Query: 77  FVTFRDPESARRACSDPTPIIDGRRANCNLASLG---RPRP--------PISYGRFRPPA 136
           FVTF+D ++A RAC D TPII+GRRANCNLASLG   R  P        P +  R  PP 
Sbjct: 62  FVTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQGPKNGNRATPP- 121

Query: 137 VYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQ-YLQIYGVPG 196
            +VG    ++  Y   F  QQ   +  Q   A P Y Y +    YV P   + Q  G  G
Sbjct: 122 -HVG--NHSQWYYPSGFTNQQ---HQQQNHQAVPFYGYPS---AYVAPNMTFNQKVGYVG 181

Query: 197 SASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIV---QFSGPNVNALTSSPMPTIQAP 255
                 Y  G   Q  P             P PQ      + G  V    +SPM      
Sbjct: 182 GT----YMNGYYAQMQP--------QPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTV 238

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy Swiss-Prot
Match: Q6P8A7 (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.0e-27
Identity = 81/210 (38.57%), Postives = 102/210 (48.57%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R YF+ FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACSDPTPIIDGRRANCNLASLGRPRPPISYGRFRPPAVYVGGMQPNRGAYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R   P    G  Q +       FG    
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALIQRPFGIPAH 126

Query: 148 VSYPY---QQGLAYPPYSYATYGPEYVYPQQYLQIYGVPGSASPTIYHYGQLGQTV-PGG 207
             YP+   Q G+  P    A       Y       Y    +A+     Y Q      P  
Sbjct: 127 YVYPHAFVQPGVVIPHVQQAAAASTSPYIDYTSAAYAQYSAAAAAAAAYDQYPYAASPAT 186

Query: 208 HGYGAVHGYGMPSPQIVQFSGPNVNALTSS 234
            GY    GYG   PQ +  + P   A  ++
Sbjct: 187 TGYVTTAGYGYAVPQPLTAAAPGTAAAAAA 210

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.8e-27
Identity = 84/218 (38.53%), Postives = 106/218 (48.62%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R YF+ FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACSDPTPIIDGRRANCNLASLGRPRPPISYGRFRPPAVYVGGMQPNRGAYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R   P    G  Q +       +G    
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALVQRPYGIPAH 126

Query: 148 VSYP---YQQGLAYP---PYSYATYGPEYVYPQQYLQIYGVPGSASPTIYHYGQLGQTVP 207
             YP    QQGL  P     + A+  P   Y       Y    +A+   Y Y       P
Sbjct: 127 YVYPQAYVQQGLVIPHVQQTAAASTSPYIDYTSAAYAQYAAAAAAAYDQYPYA----ASP 186

Query: 208 GGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQ 240
              GY    GYG   PQ +  + P   A  ++     Q
Sbjct: 187 ATTGYVTAAGYGYAVPQPLTAATPGTAAAAAAAFAQYQ 214

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-26
Identity = 83/213 (38.97%), Postives = 105/213 (49.30%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R YF+ FG+I EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACSDPTPIIDGRRANCNLASLGRPRPPISYGRFRPPAVYVGGMQPNRGAYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R   P    G  Q +       FG    
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQIHPALIQRPFGIPAH 126

Query: 148 VSYP---YQQGLAYP---PYSYATYGPEYVYPQ-QYLQIYGVPGSASPTIYHYGQLGQTV 207
             YP    Q G+  P   P +  +  P   Y    Y Q      +A+   Y Y       
Sbjct: 127 YVYPQAYVQPGVVIPHVQPTAATSTSPYIDYTSAAYAQYSAAAAAAAYDQYPYA----AS 186

Query: 208 PGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSS 234
           P   GY    GYG   PQ +  + P   A  ++
Sbjct: 187 PAATGYVTAAGYGYAVPQPLTAAAPGSAAAAAA 209

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.3e-26
Identity = 83/216 (38.43%), Postives = 103/216 (47.69%), Query Frame = 0


Query: 28  DTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYGFVTFRDPESAR 87
           DTTYTK+FVGGL + T   ++R YF+ FGEI EAVVITD+ TG+S+GYGFVT  D  +A 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 88  RACSDPTPIIDGRRANCNLASLGRPRPPISYGRFRPPAVYVGGMQPNRGAYIGNFGYQQP 147
           RAC DP PIIDGR+AN NLA LG      +  R   P    G  Q +       FG   P
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG------AKPRIMQPGFAFGVQQLHPALIQRPFGI--P 126

Query: 148 VSYPYQQGLAYP--------PYSYATYGPEYV-YPQQYLQIYGVPGSASPTIYHYGQLGQ 207
             Y Y Q    P        P + A     Y+ Y       Y    +A+     Y Q   
Sbjct: 127 AHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAAAAAAAAAAAYDQYPY 186

Query: 208 TV-PGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSS 234
              P   GY    GYG    Q +  + P   A  ++
Sbjct: 187 AASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAA 214

[Close]

BLAST of Cp4.1LG07g05700 vs. NCBI nr
Match: XP_023537721.1 (RNA-binding protein 24-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 562 bits (1448), Expect = 2.36e-201
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE
Sbjct: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180
           FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY
Sbjct: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180

Query: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240
           GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA
Sbjct: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240

Query: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Sbjct: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275

[Close]

BLAST of Cp4.1LG07g05700 vs. NCBI nr
Match: XP_022951231.1 (RNA-binding protein 24-B-like [Cucurbita moschata])

HSP 1 Score: 555 bits (1429), Expect = 1.86e-198
Identity = 271/275 (98.55%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYF+QFGEILE
Sbjct: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTF+DPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFQDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180
           FRPPAVYVG MQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY
Sbjct: 121 FRPPAVYVGRMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180

Query: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240
           GVPGSASPT YHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA
Sbjct: 181 GVPGSASPTFYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240

Query: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Sbjct: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275

[Close]

BLAST of Cp4.1LG07g05700 vs. NCBI nr
Match: XP_023002633.1 (RNA-binding protein 24-B-like [Cucurbita maxima] >XP_023002634.1 RNA-binding protein 24-B-like [Cucurbita maxima])

HSP 1 Score: 548 bits (1412), Expect = 7.25e-196
Identity = 268/275 (97.45%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYF+QFGEILE
Sbjct: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFR PESARRACSD TPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRYPESARRACSDSTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180
           FRPPA+YVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY
Sbjct: 121 FRPPAIYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180

Query: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240
           GVPGSASPTIYHYGQLGQTVPGGHGYGA+HGYGMPSPQIVQFSGPNVNALTSSPMPTIQA
Sbjct: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGALHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240

Query: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           PYPSGIP PVAAQPQFVVHS SQFVQGSGSDQTSG
Sbjct: 241 PYPSGIPVPVAAQPQFVVHSSSQFVQGSGSDQTSG 275

[Close]

BLAST of Cp4.1LG07g05700 vs. NCBI nr
Match: KAG6599081.1 (putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 524 bits (1350), Expect = 3.51e-185
Identity = 275/345 (79.71%), Postives = 283/345 (82.03%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQH   PSS+SGS+SSSGFLNSPFGDTTYTKVFVGGLAWETQS+TMR YF+QFGEILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQ------ 180
            RPPAVYVGGMQPNRG YIGNFGYQQPVSY YQQGLAYPPY YATYGPEYVYPQ      
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 ---QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALT 240
              QYLQIYGVPGSASP IYHYGQLGQTVPGGHGYGAVHGY MPSPQIVQF GPNVN LT
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG---SLSCSPE------ 300
           SSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG   +LSC  E      
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQGSSSDQTSGLANNLSCILEFFTVML 300

Query: 301 ---------TPDGLES--------LQMVEKEYGRPFFFPSVYKLL 310
                     PDG ES        L ++      P FFPSVYK L
Sbjct: 301 TREVGWCRVAPDGGESIWKRCRAALSLI------PLFFPSVYKTL 339

[Close]

BLAST of Cp4.1LG07g05700 vs. NCBI nr
Match: XP_004146763.1 (RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_003949 [Cucumis sativus])

HSP 1 Score: 519 bits (1336), Expect = 4.13e-184
Identity = 259/286 (90.56%), Postives = 266/286 (93.01%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQH P PSS+SGS+SSSGFLNSPFGDTTYTKVFVGGLAWETQS+TMR YF+QFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYG- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC+DPTPIIDGRRANCNLASLGRPRPP+SYG 
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPLSYGT 120

Query: 121 -RFRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQ---- 180
            R R PAVYVGGMQPNRG YIGNFGYQQPVSY YQQGLAYPPY YATYGPEYVYPQ    
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 -----QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNA 240
                QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGY MPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy TrEMBL
Match: A0A6J1GGZ8 (RNA-binding protein 24-B-like OS=Cucurbita moschata OX=3662 GN=LOC111454131 PE=4 SV=1)

HSP 1 Score: 555 bits (1429), Expect = 9.00e-199
Identity = 271/275 (98.55%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYF+QFGEILE
Sbjct: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTF+DPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFQDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180
           FRPPAVYVG MQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY
Sbjct: 121 FRPPAVYVGRMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180

Query: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240
           GVPGSASPT YHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA
Sbjct: 181 GVPGSASPTFYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240

Query: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Sbjct: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy TrEMBL
Match: A0A6J1KR06 (RNA-binding protein 24-B-like OS=Cucurbita maxima OX=3661 GN=LOC111496432 PE=4 SV=1)

HSP 1 Score: 548 bits (1412), Expect = 3.51e-196
Identity = 268/275 (97.45%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYF+QFGEILE
Sbjct: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFR PESARRACSD TPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRYPESARRACSDSTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180
           FRPPA+YVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY
Sbjct: 121 FRPPAIYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQQYLQIY 180

Query: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240
           GVPGSASPTIYHYGQLGQTVPGGHGYGA+HGYGMPSPQIVQFSGPNVNALTSSPMPTIQA
Sbjct: 181 GVPGSASPTIYHYGQLGQTVPGGHGYGALHGYGMPSPQIVQFSGPNVNALTSSPMPTIQA 240

Query: 241 PYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           PYPSGIP PVAAQPQFVVHS SQFVQGSGSDQTSG
Sbjct: 241 PYPSGIPVPVAAQPQFVVHSSSQFVQGSGSDQTSG 275

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy TrEMBL
Match: A0A1S3CME8 (RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1)

HSP 1 Score: 518 bits (1334), Expect = 4.04e-184
Identity = 259/286 (90.56%), Postives = 266/286 (93.01%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQH P PSS+SGS+SSSGFLNSPFGDTTYTKVFVGGLAWETQS+TMR YF+QFGEILE
Sbjct: 1   MAYQHGPGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYG- 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC+DPTPIIDGRRANCNLASLGRPRPPIS+G 
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISFGT 120

Query: 121 -RFRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQ---- 180
            R R PAVYVGGMQPNRG YIGNFGYQQPVSY YQQGLAYPPY YATYGPEYVYPQ    
Sbjct: 121 GRLRQPAVYVGGMQPNRGTYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYN 180

Query: 181 -----QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNA 240
                QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGY MPSPQI+QFSGPNVNA
Sbjct: 181 PFVGQQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYAMPSPQILQFSGPNVNA 240

Query: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Sbjct: 241 LTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 286

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy TrEMBL
Match: A0A6J1G3W1 (RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1)

HSP 1 Score: 515 bits (1327), Expect = 4.37e-183
Identity = 256/284 (90.14%), Postives = 261/284 (91.90%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQH   PSS+SGS+SSSGFLNSPFGDTTYTKVFVGGLAWETQS+TMR YF+QFGEILE
Sbjct: 1   MAYQHGRGPSSISGSSSSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC DPTPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACVDPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQ------ 180
            RPPAVYVGGMQPNRG YIGNFGYQQPVSY YQQGLAYPPY YATYGPEYVYPQ      
Sbjct: 121 LRPPAVYVGGMQPNRGNYIGNFGYQQPVSYAYQQGLAYPPYGYATYGPEYVYPQGGYNPF 180

Query: 181 ---QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALT 240
              QYLQIYGVPGSASP IYHYGQLGQTVPGGHGYGAVHGY MPSPQIVQF GPNVN LT
Sbjct: 181 VGQQYLQIYGVPGSASPAIYHYGQLGQTVPGGHGYGAVHGYAMPSPQIVQFGGPNVNPLT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           SSPMPTIQAPYPSGIPAPVAAQPQF+VHSPSQFVQGS SDQTSG
Sbjct: 241 SSPMPTIQAPYPSGIPAPVAAQPQFIVHSPSQFVQGSSSDQTSG 284

[Close]

BLAST of Cp4.1LG07g05700 vs. ExPASy TrEMBL
Match: A0A6J1DNT6 (RNA-binding protein 24-A OS=Momordica charantia OX=3673 GN=LOC111022908 PE=4 SV=1)

HSP 1 Score: 515 bits (1326), Expect = 6.21e-183
Identity = 252/284 (88.73%), Postives = 263/284 (92.61%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQHIP PSS+SGS++SSGFLNSPFGDTTYTKVFVGGLAWETQS+TMR +F+QFGEILE
Sbjct: 1   MAYQHIPGPSSISGSSTSSGFLNSPFGDTTYTKVFVGGLAWETQSETMRRHFEQFGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISYGR 120
           AVVITDKNTGRSKGYGFVTFRDPESARRAC+DPTPIIDGRRANCNLASLGRPRPPISYGR
Sbjct: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACADPTPIIDGRRANCNLASLGRPRPPISYGR 120

Query: 121 FRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQ------ 180
            RPPA YVGGMQPNRG +IGNFGYQQPVSY YQQGLAYPPY YA YGPEY+YPQ      
Sbjct: 121 LRPPAPYVGGMQPNRGTFIGNFGYQQPVSYAYQQGLAYPPYGYAAYGPEYIYPQGGYNPF 180

Query: 181 ---QYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQFSGPNVNALT 240
              QYLQIYG+PGS SP IYHYGQLGQTVPGGHGYG VHGY MPSPQIVQFSGPNVNALT
Sbjct: 181 LGQQYLQIYGMPGSTSPAIYHYGQLGQTVPGGHGYGTVHGYAMPSPQIVQFSGPNVNALT 240

Query: 241 SSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 275
           SSP+PTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG
Sbjct: 241 SSPVPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 284

[Close]

BLAST of Cp4.1LG07g05700 vs. TAIR 10
Match: AT1G76460.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 354.8 bits (909), Expect = 7.5e-98
Identity = 181/292 (61.99%), Postives = 214/292 (73.29%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILE 60
           MAYQ  PVP       S   +LNSPFGDTT+TKVFVGGLAWETQS+T+R +F+Q+GEILE
Sbjct: 1   MAYQ--PVPG------SGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILE 60

Query: 61  AVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISY-- 120
           AVVI DKNTGRSKGYGFVTFRDPE+ARRAC+DPTPIIDGRRANCNLASLGRPRPP+ Y  
Sbjct: 61  AVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYAV 120

Query: 121 -----GRFRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYP 180
                GR RP + Y+G +Q  RG+ IGN+ YQQP+ Y YQQG+ Y PY    YGPEY+Y 
Sbjct: 121 IPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVY-PYGVTAYGPEYMYS 180

Query: 181 -----------QQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIVQF 240
                      QQYLQ+YGVPG+ +  +Y YGQL QT+P GHGY AV GY +P   I+Q 
Sbjct: 181 QSQGLYSPYMGQQYLQVYGVPGAVNSPVYQYGQLSQTIPNGHGYTAVQGYSVPGSHILQL 240

Query: 241 SGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTS 275
            GP V+ +T+S MP +QAPYPSGIP P   Q   +VHSP QF+Q + SDQT+
Sbjct: 241 GGPTVSTMTTSSMPALQAPYPSGIPGPAPVQSHIIVHSP-QFMQSTASDQTT 282

[Close]

BLAST of Cp4.1LG07g05700 vs. TAIR 10
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 308.5 bits (789), Expect = 6.2e-84
Identity = 169/295 (57.29%), Postives = 200/295 (67.80%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGF--LNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEI 60
           MAY  IP          SSGF  LNSPFGDTT+TKVFVGGLAWETQS+T+R +F Q+G+I
Sbjct: 1   MAYHSIP----------SSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDI 60

Query: 61  LEAVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISY 120
           LEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR RPP+ Y
Sbjct: 61  LEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQY 120

Query: 121 -------GRFRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYV 180
                  GR RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PY    YGP+Y+
Sbjct: 121 AVIPHAPGRVRPPSPYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVY-PYGVTPYGPDYM 180

Query: 181 YP-----------QQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIV 240
           Y            QQYLQ+YGVPG+ +   Y YGQL  T+PG HGY A  GY  P   ++
Sbjct: 181 YSQSQGFYGPYMGQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVL 240

Query: 241 QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 276
           Q          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Sbjct: 241 QLG-------ATSPMSAIQSPYPS--PSAPTHQ-RVIVQTPPQYIQSSGSDQTTG 274

[Close]

BLAST of Cp4.1LG07g05700 vs. TAIR 10
Match: AT1G20880.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 308.5 bits (789), Expect = 6.2e-84
Identity = 169/295 (57.29%), Postives = 200/295 (67.80%), Query Frame = 0


Query: 1   MAYQHIPVPSSVSGSTSSSGF--LNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEI 60
           MAY  IP          SSGF  LNSPFGDTT+TKVFVGGLAWETQS+T+R +F Q+G+I
Sbjct: 1   MAYHSIP----------SSGFHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDI 60

Query: 61  LEAVVITDKNTGRSKGYGFVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRPPISY 120
           LEAVVITDKNTGRSKGYGFVTFRDPE+ARRAC DPTPIIDGRRANCNLASLGR RPP+ Y
Sbjct: 61  LEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQY 120

Query: 121 -------GRFRPPAVYVGGMQPNRGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYV 180
                  GR RPP+ YVG +Q  RG + G+  Y QP +Y YQQG+ Y PY    YGP+Y+
Sbjct: 121 AVIPHAPGRVRPPSPYVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVY-PYGVTPYGPDYM 180

Query: 181 YP-----------QQYLQIYGVPGSASPTIYHYGQLGQTVPGGHGYGAVHGYGMPSPQIV 240
           Y            QQYLQ+YGVPG+ +   Y YGQL  T+PG HGY A  GY  P   ++
Sbjct: 181 YSQSQGFYGPYMGQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSHPGSHVL 240

Query: 241 QFSGPNVNALTSSPMPTIQAPYPSGIPAPVAAQPQFVVHSPSQFVQGSGSDQTSG 276
           Q          +SPM  IQ+PYPS  P+    Q + +V +P Q++Q SGSDQT+G
Sbjct: 241 QLG-------ATSPMSAIQSPYPS--PSAPTHQ-RVIVQTPPQYIQSSGSDQTTG 274

[Close]

BLAST of Cp4.1LG07g05700 vs. TAIR 10
Match: AT1G78260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 176.8 bits (447), Expect = 2.8e-44
Identity = 117/252 (46.43%), Postives = 140/252 (55.56%), Query Frame = 0


Query: 17  SSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYG 76
           S + +  SPFGDTTYTKVFVGGLAWET +D MR YF+QFGEILEAV+ITDKNTG+SKGYG
Sbjct: 2   SQTSYYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYG 61

Query: 77  FVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPR--PPISYGRFRPPAVYVGGMQPN 136
           FVTFR+ +SA RA +DP P+IDGR+ANCN+AS GRPR  PP   G+   P+ Y  G    
Sbjct: 62  FVTFRESDSATRAVADPNPVIDGRKANCNIASFGRPRPSPPRGRGQTGSPSQYQSG---G 121

Query: 137 RGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYV---------------YPQQYLQI 196
              Y G      P + P    L YP Y Y TY P+                 Y QQ  Q+
Sbjct: 122 PSTYTGMAAPLPPAAAPQ---LMYPSYGY-TYNPDQFGYHQALYNTQLQQAQYYQQQQQL 181

Query: 197 YG----VPGSASPTI----YHYGQLGQT--VPGGHGYGAVHGYGMPSPQIVQFSGPN--V 240
           YG     P S+  TI    Y+YG   Q   VP  H +     Y        +FS P+  V
Sbjct: 182 YGGGATSPSSSGATIMPSPYYYGYSLQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFLV 241

[Close]

BLAST of Cp4.1LG07g05700 vs. TAIR 10
Match: AT1G22330.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 175.6 bits (444), Expect = 6.2e-44
Identity = 121/278 (43.53%), Postives = 154/278 (55.40%), Query Frame = 0


Query: 17  SSSGFLNSPFGDTTYTKVFVGGLAWETQSDTMRHYFQQFGEILEAVVITDKNTGRSKGYG 76
           S++ +  SPFGDTT+TKVFVGGLAWET +D MR YF QFGEILEAV+ITDK TG+SKGYG
Sbjct: 2   SNTSYYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYG 61

Query: 77  FVTFRDPESARRACSDPTPIIDGRRANCNLASLGRPRP--PISYGRFRPPAVYVGGMQPN 136
           FVTFRD +SA RA +DP P+IDGR+ANCN+AS GRPRP  P   G+   P+ Y GG Q +
Sbjct: 62  FVTFRDSDSATRAVADPNPVIDGRKANCNIASFGRPRPSTPRGRGQGGSPSQYQGGGQSS 121

Query: 137 RGAYIGNFGYQQPVSYPYQQGLAYPPYSYATYGPEYVYPQ----------QYL--QIYGV 196
                   G   PV       L YP Y Y TY  EY Y Q          QY   Q+YG 
Sbjct: 122 ------YTGMAAPVQQAAAAQLMYPSYGY-TYNSEYGYHQALYNAQLQQAQYYQQQMYGG 181

Query: 197 PGSASPTI-------YHYGQLGQTVPG-GHGYGAVHGYGMPSPQIVQFSGPNVNALTSSP 256
            G+ SP+        Y+Y Q     P   H     + +     Q  Q   P+ ++    P
Sbjct: 182 GGATSPSSSNIMPSPYYYLQAPSPRPYLHHQQHYQYHHHQQQQQQQQQRLPSASSYLIYP 241

Query: 257 MPTIQAPYPSGIP---APVAAQPQFVVHSPSQFVQGSG 270
              ++AP PS +P    P+++  +   H+P Q  +  G
Sbjct: 242 -SNVEAPTPSNVPTSQGPLSSSTE--SHAPQQVSEEGG 269

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g05700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	1.8e-27	39.38	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q6P8A7	4.0e-27	38.57	RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1	[more]
Q9I8B3	8.8e-27	38.53	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]
Q6GQD3	1.5e-26	38.97	RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1	[more]
Q9BX46	3.3e-26	38.43	RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1	[more]

BLAST of Cp4.1LG07g05700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537721.1	2.36e-201	100.00	RNA-binding protein 24-B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951231.1	1.86e-198	98.55	RNA-binding protein 24-B-like [Cucurbita moschata]	[more]
XP_023002633.1	7.25e-196	97.45	RNA-binding protein 24-B-like [Cucurbita maxima] >XP_023002634.1 RNA-binding pro...	[more]
KAG6599081.1	3.51e-185	79.71	putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_004146763.1	4.13e-184	90.56	RNA-binding protein 24-A [Cucumis sativus] >KGN48031.2 hypothetical protein Csa_...	[more]

BLAST of Cp4.1LG07g05700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGZ8	9.00e-199	98.55	RNA-binding protein 24-B-like OS=Cucurbita moschata OX=3662 GN=LOC111454131 PE=4...	[more]
A0A6J1KR06	3.51e-196	97.45	RNA-binding protein 24-B-like OS=Cucurbita maxima OX=3661 GN=LOC111496432 PE=4 S...	[more]
A0A1S3CME8	4.04e-184	90.56	RNA-binding protein 24-A OS=Cucumis melo OX=3656 GN=LOC103502602 PE=4 SV=1	[more]
A0A6J1G3W1	4.37e-183	90.14	RNA-binding protein 24-A OS=Cucurbita moschata OX=3662 GN=LOC111450546 PE=4 SV=1	[more]
A0A6J1DNT6	6.21e-183	88.73	RNA-binding protein 24-A OS=Momordica charantia OX=3673 GN=LOC111022908 PE=4 SV=...	[more]

BLAST of Cp4.1LG07g05700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76460.1	7.5e-98	61.99	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.1	6.2e-84	57.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.2	6.2e-84	57.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G78260.2	2.8e-44	46.43	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22330.1	6.2e-44	43.53	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 33..105 e-value: 1.1E-23 score: 94.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 34..90 e-value: 1.3E-16 score: 60.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 32..109 score: 16.977684
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 11..121 e-value: 7.5E-25 score: 89.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..285
None	No IPR available	PANTHER	PTHR11176:SF32	RNA-BINDING PROTEIN 38-LIKE ISOFORM X1	coord: 1..272
None	No IPR available	CDD	cd12384	RRM_RBM24_RBM38_like	coord: 32..107 e-value: 9.80229E-45 score: 145.451
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 1..272
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 5..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g05700.1	Cp4.1LG07g05700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding