Cp4.1LG07g05520 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATAAAAACGCGGTAGCCTAACAAGAAAAGTATAAGCGTAGAAAAGAGAGTCCGTCGTCTTCCATTTGTTTCTTCCACCAAATTTCATATCTCTTTCTGCCTTCCTTCGATTCCCACGCGACTCTTCCCATTCCCCATTTTATACACTCCATTTCACTGTTTTTCTTCATTCTCACACTCCTTTTCTCTCACATTTCCGTGTTTTAAGGTCAGTCTAACACTTTCATCCCTTTCCCATTACGTTTCCTTGCATAATTGCTTTAATTTTCGCTATCTCATCAATTTACTTTGATTTTTGAGTTTCATACTTCAGCTGATTCGGTTCTCATACTTGTTGTTAATTCCGCTCTGGGTTTGTAAATTTGCTTCGGTTTCGATTCTCTGTTTCTCGTTCAATTGTATATTTTAGTGGTTTAATTGTACAACAAGGGATAATGAACTCTGTTTTTGCTGGATGAATTGTTTGTCGAAGTAAATTTTGGAATGGAAGATATTGTTCGATGGGTTTACTTTATTATGTTCCATTCGTTTTTTTCTTTCTTGTTGTATTGCGGTCTTCACTAAGTAAACCTGTGTACGTGTGAAATTCTTTATTATCCTTTTGGAAAAACATGTGGTGCTTGCTTTTCTAAGGCAATCTTTTCAATAAGCAACCAATGAGAGTTTACTTTGACTTCTTCTAACATCTATCCATCAAAGCTTTGTGGTGGGACCAAACATTTGACGGACCGTATTTCATCCACATCATAATTCAAGTCTTGTATAGGAATCATTAGAAAAATTATCGAAAGGATTATTGTTTTTTTTTTTTTTTTTTTTTTNAATCATTTCAGGGCCTTGCAATTGAGAAGGCAAGGGATAAAGGTTTGCTTGTTTTTCTTATTGTGTTCTTTTTCTGCTCATCCAGCCAAAAAACAATTGAAGTGCCTCTGGATTTTAACTGCTCTCTGTCATCTATATGGTTACCCATGCAAGGTATTAAATTTTATGATTTGAGGCGTGAAACCCATTTCTTTTTCTTTTTCTTTTTCTCTTCTTAAATCTGGATCTAATAAAAGGAATTTAGTGTGATTTGTTTCAGTTTTCTTCAAAACCTCATGATCTTTATTTTCTAACCCAAAGATCTTAGTAGAGATGTGTAACGGCCCAAGCCCACCGCGAGCAGATGTTTTCCTCTTTGGGCTTTCCCTTTCAAGTTTACCCTCAAAGTTTTTAAAATGCGTATGCTAGGGAGAGGTTTCCAAAGATCTTAGGTTAGGTATTCCGATTTGAATCGTGTATGATTGGAATTGAAGAATTTAATTTCTAAGATTATGTACCTGCACGAAATCTCTAAGTTTGAATATGCAGTTTTGGTGTTGGCATATATCATGCCAAGCTGTTTGGCTTTTTTGTTTTAAAGTTTTAAATTAGGCAATATCATTCACAAAATTTGATTTCAGAATATGTAGTTTTGGTGTTGGTGAGCTTCACTCACCAATGTTTGACTGACTCCAAATTTCTAAAAGTTTGGTTACTGAATGTTCTTTAGTTTTTCTCCATCTCTCAGCTTTAGGAGCATTTAAATGAAGTTGATTGGCCTTCGATTAAGAATATGTATGGTAGGAAGAGGGGAAGATGTGTTGAATGAATCAAAGGTTTTATGTGTCGGCCCACGTTAGTTACCAATTAGGCTGTTTGTGGGAAATTGATTATTTTGTTCCTTGGCTCTTGTAATCTCTATCCAATTGTCAATAATAGAAATGATTTCTAACACAAGTTTTGGTGTTAAATTTTAAAAAAATTCATATTAAATTATGAGAGGAGACTTCATTTATAGTGTCTTAAGCATCAAAAGAAGAGTTGATGATTTGAGTTAAATTGTAAATATAATGTTCTTGAGGAAGATAACAAGTTCAAAAGCATTTTTCTTTCTTCTCTGACTCTGTTCTTTGTTCGATGGTCATGGATTTCTCTTGTCATAACAGTTGAGAACTCCAAAAATGGGTCAAGCATTAGGTTGCATTCAAGTCGACCAGTCAACTGTAGCCATTAGAGAAACATTTGGTAAGTACGACGATGTGCTTCAACCTGGTTGCCATTGTCTACCTTGGTGCCTTGGAAGCCAGGTAGCTGGTCATCTCTCTTTACGTGTCCAGCAACTTGATGTTCGCTGTGAGACAAAGACAAAGGTATGTTGCCTCCAAAAAATTAACAATCGATTGACTTCTTTTCTAAGATTATCTGTAAAAGGGCTTATTCATGAAGAAGAATAAGAAGCTCCTTAAGCTAAATGTTCAGGCTATTAATGTTTATTAGTTTACTATTCTTAATGTTAGTTTATTTTCTGGATCTGTTCAGGATAATGTTTTTGTCACCGTCGTTGCCTCTATTCAATACCGAGCCCTGGCCGACAAGGCTTCAGATGCTTTTTATAAGCTTAGCAATACAAGAGAACAGATCCAAGCTTATGTCTTCGATGGTATACTTTGTTCTTTTTGTTCAGTTCTTTACGAGCAATTTAAGTTTGATAGTATCTTTTATTGGGCTGATTTTGATGGGTTCTACTCCAGGGAACATTTACTGTTGTGTTTAATGATAACTCCTCAATGAAATAAATAATTATTTACCAGGGCAAGAAATTCTAACTACCATAACTAATGTTTGAAATTTAGCCGTTAGCACCAATCCTCTTCAGCTTATTACTTACCGTTTTTTGTTAAAAGAAAACTTAGAGTCCACTGATAGTAGGGGTGTACATTCAACCCGACAAACTAACAACTCGGACCAACCCAACCCAAATTATAGGGGTTGGGTTGGGTTGGGTTATTTTTTTTGAACTCGAATTGACTTGGTTCGGTTTCGGATCAATAAGACAAAAACTTGAGGCTTGTTTTATAACCATTCTTTTTGAGAAAAGTCATTTTAGACACAATTGTGCTGTATTCATTTTTTAGTAGTTTTTTTAAAATAAAATCTTAGCTAAATTTACCGAGATTGTAACGGCCCAGGTCCACCGTTAGCAAATATTGTCGTTTTTGGGCTTTTCCTTTCAGGCTTCCCCTCAGGGTTTTAAAACACGTATGCTAGGGAAAGGTTTCCATACCCTTATAAATGGTGTTTTGTTCTCCTCCTCAACCAACCTGGACATCACATAGACAAATTTTTAAAAGCACTTATAGTTTTTTGAAGTTGGGTTACTAAGGCTGATGTTCCGTTGTTTTATTCTTTTAGTTATTAGGGCAAGTGTTCCAAAGTTGGACCTTGATTCAACTTTCGAACAGAAGAATGATATTGCAAAAGCTGTGGAAGACGAACTGGAGAAGGTAAATTTCTTCTTTTCTTCATGATTCAGAATTAACCAACTGGAGAAAGTGAATTTTTTTCTATATATTGTGTTTTGGTCATGTAGGCCATGTCAGCTTATGGGTATGAGATAGTTCAGACTCTGATTGTGGACATTGAGCCAGATGAGCATGTAAAGAGAGCAATGAATGAAATCAATGCAGGTAGTAAAAGACTGAGCAATCAATGATATATGGCTTGTATTTGCCTTTGGCTATGCAAATCTTTGACATGTGTATCATTTCCTTGTATAAACAGCTGCAAGAATGAGAGTTGCTGCAAATGAGAAAGCTGAAGCAGAGAAGATACTGCAGATTAAGAGAGCCGAAGGAGACGCTGAATCCAAGTATCTGGCAGGGCTCGGTATTGCACGGCAGCGTCAAGCCATTGTTGACGGGCTCAGAGACAGCGTGCTAGCATTTGCCGAAAACGTCCCCGGAACGACATCTAAGGATGTCATGGACATGGTTCTGGTGACCCAATACTTCGACACGATGAAGGAAATCGGAGCATCGTCAAAGTCTAATTCGGTTTTCATCCCACACGGACCTGGTGCAGTTAAAGATATAGCTTCACAGATCAGAGATGGTCTTCTCCAAGCAAGCCAAACTCAGTAGATTGGTGAAGATTGAAGACACTTGTGAAGATGATATACAAAGTATATAAAAGGTGGCATGTGATTAATGATGTTTGGCTTGTTTTAGTTGCAAATTTGTGTGTTGTGTAGTGCATTGTTTCTCTTAAACGATCTATAAATATTTACTAATATTATTTACCTTATGAGTAGATGGAAAGCATGAAGTATAAAAGTTATATATCATATTGGAAGTGTTTGTATGGGAGCTTTCTTAGACCATTTTTAATGCAATCCTGTTAAACAAGCTTCTTGCTCATATCTTCTGATC AGATAAAAACGCGGTAGCCTAACAAGAAAAGTATAAGCGTAGAAAAGAGAGTCCGTCGTCTTCCATTTGTTTCTTCCACCAAATTTCATATCTCTTTCTGCCTTCCTTCGATTCCCACGCGACTCTTCCCATTCCCCATTTTATACACTCCATTTCACTGTTTTTCTTCATTCTCACACTCCTTTTCTCTCACATTTCCGTGTTTTAAGCCAAAAAACAATTGAAGTGCCTCTGGATTTTAACTGCTCTCTGTCATCTATATGGTTACCCATGCAAGTTGAGAACTCCAAAAATGGGTCAAGCATTAGGTTGCATTCAAGTCGACCAGTCAACTGTAGCCATTAGAGAAACATTTGGTAAGTACGACGATGTGCTTCAACCTGGTTGCCATTGTCTACCTTGGTGCCTTGGAAGCCAGGTAGCTGGTCATCTCTCTTTACGTGTCCAGCAACTTGATGTTCGCTGTGAGACAAAGACAAAGGATAATGTTTTTGTCACCGTCGTTGCCTCTATTCAATACCGAGCCCTGGCCGACAAGGCTTCAGATGCTTTTTATAAGCTTAGCAATACAAGAGAACAGATCCAAGCTTATGTCTTCGATGTTATTAGGGCAAGTGTTCCAAAGTTGGACCTTGATTCAACTTTCGAACAGAAGAATGATATTGCAAAAGCTGTGGAAGACGAACTGGAGAAGGCCATGTCAGCTTATGGGTATGAGATAGTTCAGACTCTGATTGTGGACATTGAGCCAGATGAGCATGTAAAGAGAGCAATGAATGAAATCAATGCAGCTGCAAGAATGAGAGTTGCTGCAAATGAGAAAGCTGAAGCAGAGAAGATACTGCAGATTAAGAGAGCCGAAGGAGACGCTGAATCCAAGTATCTGGCAGGGCTCGGTATTGCACGGCAGCGTCAAGCCATTGTTGACGGGCTCAGAGACAGCGTGCTAGCATTTGCCGAAAACGTCCCCGGAACGACATCTAAGGATGTCATGGACATGGTTCTGGTGACCCAATACTTCGACACGATGAAGGAAATCGGAGCATCGTCAAAGTCTAATTCGGTTTTCATCCCACACGGACCTGGTGCAGTTAAAGATATAGCTTCACAGATCAGAGATGGTCTTCTCCAAGCAAGCCAAACTCAGTAGATTGGTGAAGATTGAAGACACTTGTGAAGATGATATACAAAGTATATAAAAGGTGGCATGTGATTAATGATGTTTGGCTTGTTTTAGTTGCAAATTTGTGTGTTGTGTAGTGCATTGTTTCTCTTAAACGATCTATAAATATTTACTAATATTATTTACCTTATGAGTAGATGGAAAGCATGAAGTATAAAAGTTATATATCATATTGGAAGTGTTTGTATGGGAGCTTTCTTAGACCATTTTTAATGCAATCCTGTTAAACAAGCTTCTTGCTCATATCTTCTGATC ATGGGTCAAGCATTAGGTTGCATTCAAGTCGACCAGTCAACTGTAGCCATTAGAGAAACATTTGGTAAGTACGACGATGTGCTTCAACCTGGTTGCCATTGTCTACCTTGGTGCCTTGGAAGCCAGGTAGCTGGTCATCTCTCTTTACGTGTCCAGCAACTTGATGTTCGCTGTGAGACAAAGACAAAGGATAATGTTTTTGTCACCGTCGTTGCCTCTATTCAATACCGAGCCCTGGCCGACAAGGCTTCAGATGCTTTTTATAAGCTTAGCAATACAAGAGAACAGATCCAAGCTTATGTCTTCGATGTTATTAGGGCAAGTGTTCCAAAGTTGGACCTTGATTCAACTTTCGAACAGAAGAATGATATTGCAAAAGCTGTGGAAGACGAACTGGAGAAGGCCATGTCAGCTTATGGGTATGAGATAGTTCAGACTCTGATTGTGGACATTGAGCCAGATGAGCATGTAAAGAGAGCAATGAATGAAATCAATGCAGCTGCAAGAATGAGAGTTGCTGCAAATGAGAAAGCTGAAGCAGAGAAGATACTGCAGATTAAGAGAGCCGAAGGAGACGCTGAATCCAAGTATCTGGCAGGGCTCGGTATTGCACGGCAGCGTCAAGCCATTGTTGACGGGCTCAGAGACAGCGTGCTAGCATTTGCCGAAAACGTCCCCGGAACGACATCTAAGGATGTCATGGACATGGTTCTGGTGACCCAATACTTCGACACGATGAAGGAAATCGGAGCATCGTCAAAGTCTAATTCGGTTTTCATCCCACACGGACCTGGTGCAGTTAAAGATATAGCTTCACAGATCAGAGATGGTCTTCTCCAAGCAAGCCAAACTCAGTAG MGQALGCIQVDQSTVAIRETFGKYDDVLQPGCHCLPWCLGSQVAGHLSLRVQQLDVRCETKTKDNVFVTVVASIQYRALADKASDAFYKLSNTREQIQAYVFDVIRASVPKLDLDSTFEQKNDIAKAVEDELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRVAANEKAEAEKILQIKRAEGDAESKYLAGLGIARQRQAIVDGLRDSVLAFAENVPGTTSKDVMDMVLVTQYFDTMKEIGASSKSNSVFIPHGPGAVKDIASQIRDGLLQASQTQ Homology
BLAST of Cp4.1LG07g05520 vs. ExPASy Swiss-Prot
Match: Q9CAR7 (Hypersensitive-induced response protein 2 OS=Arabidopsis thaliana OX=3702 GN=HIR2 PE=1 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 9.6e-142 Identity = 255/282 (90.43%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy Swiss-Prot
Match: Q6ZIV7 (Hypersensitive-induced response protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIR1 PE=1 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 1.8e-140 Identity = 251/281 (89.32%), Postives = 273/281 (97.15%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy Swiss-Prot
Match: Q6K550 (Hypersensitive-induced response protein-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HIRL2 PE=3 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 9.0e-140 Identity = 247/282 (87.59%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy Swiss-Prot
Match: Q9FM19 (Hypersensitive-induced response protein 1 OS=Arabidopsis thaliana OX=3702 GN=HIR1 PE=1 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 1.3e-138 Identity = 251/282 (89.01%), Postives = 269/282 (95.39%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy Swiss-Prot
Match: Q5GI04 (Hypersensitive-induced reaction 1 protein OS=Capsicum annuum OX=4072 GN=HIR1 PE=1 SV=1) HSP 1 Score: 485.3 bits (1248), Expect = 4.6e-136 Identity = 245/282 (86.88%), Postives = 267/282 (94.68%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. NCBI nr
Match: XP_022951590.1 (hypersensitive-induced response protein 1 [Cucurbita moschata] >XP_022951591.1 hypersensitive-induced response protein 1 [Cucurbita moschata] >XP_022951592.1 hypersensitive-induced response protein 1 [Cucurbita moschata] >XP_022951593.1 hypersensitive-induced response protein 1 [Cucurbita moschata] >XP_023537077.1 hypersensitive-induced response protein 1 [Cucurbita pepo subsp. pepo] >XP_023537078.1 hypersensitive-induced response protein 1 [Cucurbita pepo subsp. pepo] >XP_023537079.1 hypersensitive-induced response protein 1 [Cucurbita pepo subsp. pepo] >XP_023537081.1 hypersensitive-induced response protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 551 bits (1420), Expect = 1.55e-197 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. NCBI nr
Match: KAG7020748.1 (Hypersensitive-induced response protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 551 bits (1420), Expect = 1.94e-197 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. NCBI nr
Match: XP_023002105.1 (hypersensitive-induced response protein 2 [Cucurbita maxima] >XP_023002106.1 hypersensitive-induced response protein 2 [Cucurbita maxima] >XP_023002107.1 hypersensitive-induced response protein 2 [Cucurbita maxima]) HSP 1 Score: 548 bits (1411), Expect = 3.65e-196 Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. NCBI nr
Match: KAG6585815.1 (Hypersensitive-induced response protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 548 bits (1412), Expect = 7.49e-196 Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. NCBI nr
Match: XP_008456463.1 (PREDICTED: hypersensitive-induced response protein 2 [Cucumis melo] >XP_008456464.1 PREDICTED: hypersensitive-induced response protein 2 [Cucumis melo] >XP_008456466.1 PREDICTED: hypersensitive-induced response protein 2 [Cucumis melo] >KAA0036448.1 hypersensitive-induced response protein 2 [Cucumis melo var. makuwa] >TYK00038.1 hypersensitive-induced response protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 545 bits (1403), Expect = 6.06e-195 Identity = 280/285 (98.25%), Postives = 284/285 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy TrEMBL
Match: A0A6J1GI46 (hypersensitive-induced response protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111454357 PE=4 SV=1) HSP 1 Score: 551 bits (1420), Expect = 7.51e-198 Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy TrEMBL
Match: A0A6J1KIJ4 (hypersensitive-induced response protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111496069 PE=4 SV=1) HSP 1 Score: 548 bits (1411), Expect = 1.77e-196 Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy TrEMBL
Match: A0A1S3C2W5 (hypersensitive-induced response protein 2 OS=Cucumis melo OX=3656 GN=LOC103496410 PE=4 SV=1) HSP 1 Score: 545 bits (1403), Expect = 2.93e-195 Identity = 280/285 (98.25%), Postives = 284/285 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy TrEMBL
Match: A0A5D3BLN7 (Hypersensitive-induced response protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00840 PE=4 SV=1) HSP 1 Score: 545 bits (1403), Expect = 2.93e-195 Identity = 280/285 (98.25%), Postives = 284/285 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. ExPASy TrEMBL
Match: Q6UNT3 (Hypersensitive-induced response protein OS=Cucumis sativus OX=3659 GN=Csa_6G404210 PE=2 SV=1) HSP 1 Score: 541 bits (1395), Expect = 4.68e-194 Identity = 278/284 (97.89%), Postives = 283/284 (99.65%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. TAIR 10
Match: AT1G69840.1 (SPFH/Band 7/PHB domain-containing membrane-associated protein family ) HSP 1 Score: 504.2 bits (1297), Expect = 6.8e-143 Identity = 255/282 (90.43%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. TAIR 10
Match: AT1G69840.3 (SPFH/Band 7/PHB domain-containing membrane-associated protein family ) HSP 1 Score: 504.2 bits (1297), Expect = 6.8e-143 Identity = 255/282 (90.43%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. TAIR 10
Match: AT1G69840.4 (SPFH/Band 7/PHB domain-containing membrane-associated protein family ) HSP 1 Score: 504.2 bits (1297), Expect = 6.8e-143 Identity = 255/282 (90.43%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. TAIR 10
Match: AT1G69840.2 (SPFH/Band 7/PHB domain-containing membrane-associated protein family ) HSP 1 Score: 504.2 bits (1297), Expect = 6.8e-143 Identity = 255/282 (90.43%), Postives = 272/282 (96.45%), Query Frame = 0
BLAST of Cp4.1LG07g05520 vs. TAIR 10
Match: AT1G69840.5 (SPFH/Band 7/PHB domain-containing membrane-associated protein family ) HSP 1 Score: 504.2 bits (1297), Expect = 6.8e-143 Identity = 255/282 (90.43%), Postives = 272/282 (96.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|