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Cp4.1LG07g05050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCCCGTACGTGTCTACCGCACCATCCCTAAATTAACCAAATTATATCATTATAACATTTCATTCCATCCCTTTGAAACTCATGAACATCTCTCGAGAATTTCGAATCTAAAGTTCTTGGTAAAGCGTTTGAATTTTGTTGGAAGCTCCACAGCATGCACCAATCGCAGGTATTAATTAAGCCATTCCTACCTCTTCGATCACTAATGATCAAAACCCAACTTAGTTCCTCTAATTGTGTCTTGTTTGAAGGGGTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTCGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAAGGAGATGATAGCCAAGGGCGTGGGGTGTTGGGTAGTGCAGCCGCTGCTGTGGCGAATACTCTTCGTTCGGCTAAGGACGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGATTCGAAGCAATGAAGTATGGATTATGTAATGTAATATGAACTGTTGAATGGTTTTGTTTTATATTTAATGTCTGGTTCCAACTGGGAAGCTGAAGTTTTGTATTATAGTGTGTGAAATAATGGAACCAAAATTGATCGCAACTCGGC CATCCCGTACGTGTCTACCGCACCATCCCTAAATTAACCAAATTATATCATTATAACATTTCATTCCATCCCTTTGAAACTCATGAACATCTCTCGAGAATTTCGAATCTAAAGTTCTTGGTAAAGCGTTTGAATTTTGTTGGAAGCTCCACAGCATGCACCAATCGCAGGGGTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTCGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAAGGAGATGATAGCCAAGGGCGTGGGGTGTTGGGTAGTGCAGCCGCTGCTGTGGCGAATACTCTTCGTTCGGCTAAGGACGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGATTCGAAGCAATGAAGTATGGATTATGTAATGTAATATGAACTGTTGAATGGTTTTGTTTTATATTTAATGTCTGGTTCCAACTGGGAAGCTGAAGTTTTGTATTATAGTGTGTGAAATAATGGAACCAAAATTGATCGCAACTCGGC ATGCACCAATCGCAGGGGTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTCGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAAGGAGATGATAGCCAAGGGCGTGGGGTGTTGGGTAGTGCAGCCGCTGCTGTGGCGAATACTCTTCGTTCGGCTAAGGACGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGA MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSAAAAVANTLRSAKDAIFGKGKERNDD Homology
BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAG6585682.1 (hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020595.1 hypothetical protein SDJN02_17281 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169 bits (427), Expect = 1.28e-52 Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KDP41684.1 (hypothetical protein JCGZ_16091 [Jatropha curcas]) HSP 1 Score: 97.8 bits (242), Expect = 2.08e-24 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAB1220313.1 (hypothetical protein CJ030_MR3G019059 [Morella rubra]) HSP 1 Score: 99.8 bits (247), Expect = 4.43e-24 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAF5736085.1 (hypothetical protein HS088_TW14G00219 [Tripterygium wilfordii]) HSP 1 Score: 93.2 bits (230), Expect = 1.36e-22 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAG5251227.1 (hypothetical protein IMY05_002G0107300 [Salix suchowensis]) HSP 1 Score: 89.4 bits (220), Expect = 4.63e-21 Identity = 50/85 (58.82%), Postives = 57/85 (67.06%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A067LC75 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.00e-24 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A6A1W5Z9 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 2.14e-24 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A7J7CPR1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00219 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 6.56e-23 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A5N5NRJ4 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_002689 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.10e-21 Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A2P5EGM5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_195170 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.37e-20 Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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