Cp4.1LG07g05050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g05050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionEarly dehydration inducible protein
LocationCp4.1LG07: 3266122 .. 3266769 (-)
RNA-Seq ExpressionCp4.1LG07g05050
SyntenyCp4.1LG07g05050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCCCGTACGTGTCTACCGCACCATCCCTAAATTAACCAAATTATATCATTATAACATTTCATTCCATCCCTTTGAAACTCATGAACATCTCTCGAGAATTTCGAATCTAAAGTTCTTGGTAAAGCGTTTGAATTTTGTTGGAAGCTCCACAGCATGCACCAATCGCAGGTATTAATTAAGCCATTCCTACCTCTTCGATCACTAATGATCAAAACCCAACTTAGTTCCTCTAATTGTGTCTTGTTTGAAGGGGTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTCGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAAGGAGATGATAGCCAAGGGCGTGGGGTGTTGGGTAGTGCAGCCGCTGCTGTGGCGAATACTCTTCGTTCGGCTAAGGACGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGATTCGAAGCAATGAAGTATGGATTATGTAATGTAATATGAACTGTTGAATGGTTTTGTTTTATATTTAATGTCTGGTTCCAACTGGGAAGCTGAAGTTTTGTATTATAGTGTGTGAAATAATGGAACCAAAATTGATCGCAACTCGGC

mRNA sequence

CATCCCGTACGTGTCTACCGCACCATCCCTAAATTAACCAAATTATATCATTATAACATTTCATTCCATCCCTTTGAAACTCATGAACATCTCTCGAGAATTTCGAATCTAAAGTTCTTGGTAAAGCGTTTGAATTTTGTTGGAAGCTCCACAGCATGCACCAATCGCAGGGGTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTCGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAAGGAGATGATAGCCAAGGGCGTGGGGTGTTGGGTAGTGCAGCCGCTGCTGTGGCGAATACTCTTCGTTCGGCTAAGGACGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGATTCGAAGCAATGAAGTATGGATTATGTAATGTAATATGAACTGTTGAATGGTTTTGTTTTATATTTAATGTCTGGTTCCAACTGGGAAGCTGAAGTTTTGTATTATAGTGTGTGAAATAATGGAACCAAAATTGATCGCAACTCGGC

Coding sequence (CDS)

ATGCACCAATCGCAGGGGTCCGAGAAGATAAATGAAGAAGGAGCCATTGAGACGAAGGTTGAAACAGTCGATGAGCGGTCACCGCCGGGGCAGAGCGAGGAGCCCAGAAATGAAAAGACAACGGTTGTGCATTTAACTCGAAAGCAAGGAGATGATAGCCAAGGGCGTGGGGTGTTGGGTAGTGCAGCCGCTGCTGTGGCGAATACTCTTCGTTCGGCTAAGGACGCGATTTTTGGTAAGGGGAAAGAGAGGAACGATGACTGA

Protein sequence

MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSAAAAVANTLRSAKDAIFGKGKERNDD
Homology
BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAG6585682.1 (hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020595.1 hypothetical protein SDJN02_17281 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (427), Expect = 1.28e-52
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0

Query: 1  MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLG 60
          MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLG
Sbjct: 1  MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLG 60

Query: 61 SAAAAVANTLRSAKDAIFGKGKERNDD 87
          SAAAAVANTLRSAKDAIFGKGKERNDD
Sbjct: 61 SAAAAVANTLRSAKDAIFGKGKERNDD 87

BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KDP41684.1 (hypothetical protein JCGZ_16091 [Jatropha curcas])

HSP 1 Score: 97.8 bits (242), Expect = 2.08e-24
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0

Query: 4  SQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSAA 63
          SQG+E++NEEGAIETKV+TVD RS   Q EEP  EK  VVHLTR++ D   G G+L   A
Sbjct: 3  SQGTERVNEEGAIETKVDTVDYRSSAAQ-EEPNKEKVGVVHLTRQKRDSGSGDGILARTA 62

Query: 64 AAVANTLRSAKDAIFGKGKERN 85
          AAV NTLRSAKDA+ G+GK+++
Sbjct: 63 AAVTNTLRSAKDAVVGRGKDKD 83

BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAB1220313.1 (hypothetical protein CJ030_MR3G019059 [Morella rubra])

HSP 1 Score: 99.8 bits (247), Expect = 4.43e-24
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0

Query: 1   MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLG 60
           M++S+G+E++NE+GAIETKVET D RSP GQ +EP+ E  TVVHLTR +G  S G   + 
Sbjct: 93  MNKSKGTEEVNEQGAIETKVETQDHRSPAGQDKEPKTENVTVVHLTRDEGRSSVGGSAMA 152

Query: 61  SAAAAVANTLRSAKDAIFGKGKE 83
             A A ANT+RSAK+AIFG GK+
Sbjct: 153 GTATAAANTIRSAKEAIFGGGKD 175

BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAF5736085.1 (hypothetical protein HS088_TW14G00219 [Tripterygium wilfordii])

HSP 1 Score: 93.2 bits (230), Expect = 1.36e-22
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0

Query: 3  QSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSA 62
          +S+G+E+INE+GA+ETKVETVD +SP G+ ++PR EK  VVHL R  G      GVL  A
Sbjct: 2  ESKGTERINEQGAVETKVETVDYQSPAGEDKDPRLEKVGVVHLRRDDGRSGNKGGVLAGA 61

Query: 63 AAAVANTLRSAKDAIFGKGKE 83
          AAAVANT +SAK+AI G GK+
Sbjct: 62 AAAVANTFKSAKNAIVGSGKD 82

BLAST of Cp4.1LG07g05050 vs. NCBI nr
Match: KAG5251227.1 (hypothetical protein IMY05_002G0107300 [Salix suchowensis])

HSP 1 Score: 89.4 bits (220), Expect = 4.63e-21
Identity = 50/85 (58.82%), Postives = 57/85 (67.06%), Query Frame = 0

Query: 1  MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLG 60
          M   QG+E+INEEG  ETKVETVD R+  GQ E P +EK  VVHLTR +     G G L 
Sbjct: 1  MKTQQGTERINEEGEAETKVETVDHRTSAGQGE-PTDEKVGVVHLTRNKRGSGSGGGFLS 60

Query: 61 SAAAAVANTLRSAKDAIFGKGKERN 85
          SAAAAV NT +SAKDAI G G + N
Sbjct: 61 SAAAAVTNTFKSAKDAIMGGGSKHN 84

BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A067LC75 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.00e-24
Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 0

Query: 4  SQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSAA 63
          SQG+E++NEEGAIETKV+TVD RS   Q EEP  EK  VVHLTR++ D   G G+L   A
Sbjct: 3  SQGTERVNEEGAIETKVDTVDYRSSAAQ-EEPNKEKVGVVHLTRQKRDSGSGDGILARTA 62

Query: 64 AAVANTLRSAKDAIFGKGKERN 85
          AAV NTLRSAKDA+ G+GK+++
Sbjct: 63 AAVTNTLRSAKDAVVGRGKDKD 83

BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A6A1W5Z9 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.14e-24
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 0

Query: 1   MHQSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLG 60
           M++S+G+E++NE+GAIETKVET D RSP GQ +EP+ E  TVVHLTR +G  S G   + 
Sbjct: 93  MNKSKGTEEVNEQGAIETKVETQDHRSPAGQDKEPKTENVTVVHLTRDEGRSSVGGSAMA 152

Query: 61  SAAAAVANTLRSAKDAIFGKGKE 83
             A A ANT+RSAK+AIFG GK+
Sbjct: 153 GTATAAANTIRSAKEAIFGGGKD 175

BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A7J7CPR1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00219 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 6.56e-23
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0

Query: 3  QSQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSA 62
          +S+G+E+INE+GA+ETKVETVD +SP G+ ++PR EK  VVHL R  G      GVL  A
Sbjct: 2  ESKGTERINEQGAVETKVETVDYQSPAGEDKDPRLEKVGVVHLRRDDGRSGNKGGVLAGA 61

Query: 63 AAAVANTLRSAKDAIFGKGKE 83
          AAAVANT +SAK+AI G GK+
Sbjct: 62 AAAVANTFKSAKNAIVGSGKD 82

BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A5N5NRJ4 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_002689 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 3.10e-21
Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 4  SQGSEKINEEGAIETKVETVDERSPPGQSEEPRNEKTTVVHLTRKQGDDSQGRGVLGSAA 63
          +QG+E+INEEG  ETKVETVD R+  GQ E P +EK  VVHLTR +     G G L SAA
Sbjct: 3  TQGTERINEEGEAETKVETVDHRTSAGQGE-PTDEKVGVVHLTRNKTGSGSGGGFLSSAA 62

Query: 64 AAVANTLRSAKDAIFGKGKERN 85
          AAV NT +SAKDAI G G + N
Sbjct: 63 AAVTNTFKSAKDAIMGGGSKHN 83

BLAST of Cp4.1LG07g05050 vs. ExPASy TrEMBL
Match: A0A2P5EGM5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_195170 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.37e-20
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0

Query: 1  MHQSQGSEKINEEGAIETKVETVDERSPPGQS-EEPRNEKTTVVHLTRK-QGDDSQGRGV 60
          M+ S+G E+INE  A+E+KV TVD R+PPG+  +EP+ E   VVHLTRK  G  S G GV
Sbjct: 1  MNNSRGKEEINEGAAVESKVNTVDYRTPPGEEGKEPKEEGVQVVHLTRKGAGSASSGGGV 60

Query: 61 LGSAAAAVANTLRSAKDAIFGKGKER 84
          L  AAAAVANTL+SAKDAI   G+++
Sbjct: 61 LAKAAAAVANTLQSAKDAISRTGRDK 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585682.11.28e-52100.00hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sorori... [more]
KDP41684.12.08e-2462.20hypothetical protein JCGZ_16091 [Jatropha curcas][more]
KAB1220313.14.43e-2459.04hypothetical protein CJ030_MR3G019059 [Morella rubra][more]
KAF5736085.11.36e-2259.26hypothetical protein HS088_TW14G00219 [Tripterygium wilfordii][more]
KAG5251227.14.63e-2158.82hypothetical protein IMY05_002G0107300 [Salix suchowensis][more]
Match NameE-valueIdentityDescription
A0A067LC751.00e-2462.20Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1[more]
A0A6A1W5Z92.14e-2459.04Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1[more]
A0A7J7CPR16.56e-2359.26Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00219 ... [more]
A0A5N5NRJ43.10e-2159.76Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_002689 PE=4 SV=1[more]
A0A2P5EGM51.37e-2058.14Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_195170 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g05050.1Cp4.1LG07g05050.1mRNA