Cp4.1LG07g04860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g04860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionFKBP-type peptidyl-prolyl cis-trans isomerase family protein
LocationCp4.1LG07: 3461194 .. 3461607 (-)
RNA-Seq ExpressionCp4.1LG07g04860
SyntenyCp4.1LG07g04860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA

mRNA sequence

ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA

Coding sequence (CDS)

ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA

Protein sequence

MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
Homology
BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match: XP_022951262.1 (uncharacterized protein LOC111454153 [Cucurbita moschata] >XP_023536942.1 uncharacterized protein LOC111798173 [Cucurbita pepo subsp. pepo] >XP_023537894.1 uncharacterized protein LOC111798793 [Cucurbita pepo subsp. pepo] >KAG6585711.1 hypothetical protein SDJN03_18444, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 278 bits (711), Expect = 3.49e-94
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL
Sbjct: 72  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 131

Query: 121 VYPRSRSYAVTSTKSGA 137
           VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148

BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match: KAG7020614.1 (hypothetical protein SDJN02_17300, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275 bits (703), Expect = 5.79e-93
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL
Sbjct: 72  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 131

Query: 121 VYPRSRSYAVTSTKSG 136
           VYPRSRSYA TSTKSG
Sbjct: 132 VYPRSRSYAATSTKSG 147

BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match: XP_023002833.1 (uncharacterized protein LOC111496579 [Cucurbita maxima])

HSP 1 Score: 273 bits (699), Expect = 2.36e-92
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRSMDIKDVDADVVYPQRVRQS GLPKSCSVGMGRIDEDSACEFE GVEEKGDL
Sbjct: 72  LVKAASVRSMDIKDVDADVVYPQRVRQSNGLPKSCSVGMGRIDEDSACEFEDGVEEKGDL 131

Query: 121 VYPRSRSYAVTSTKSGA 137
           VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148

BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match: KAA0060962.1 (uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 252 bits (643), Expect = 5.65e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 1   MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 60

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE  VE+K DL
Sbjct: 61  LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 120

Query: 121 VYPRSRSYAVTSTKSG 136
           VYPRS+SYAVT++KSG
Sbjct: 121 VYPRSKSYAVTNSKSG 136

BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match: XP_008444532.1 (PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo])

HSP 1 Score: 252 bits (643), Expect = 8.45e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 13  MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 72

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE  VE+K DL
Sbjct: 73  LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 132

Query: 121 VYPRSRSYAVTSTKSG 136
           VYPRS+SYAVT++KSG
Sbjct: 133 VYPRSKSYAVTNSKSG 148

BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match: A0A6J1GH58 (uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC111454153 PE=4 SV=1)

HSP 1 Score: 278 bits (711), Expect = 1.69e-94
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL
Sbjct: 72  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 131

Query: 121 VYPRSRSYAVTSTKSGA 137
           VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148

BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match: A0A6J1KUQ7 (uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579 PE=4 SV=1)

HSP 1 Score: 273 bits (699), Expect = 1.14e-92
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12  MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRSMDIKDVDADVVYPQRVRQS GLPKSCSVGMGRIDEDSACEFE GVEEKGDL
Sbjct: 72  LVKAASVRSMDIKDVDADVVYPQRVRQSNGLPKSCSVGMGRIDEDSACEFEDGVEEKGDL 131

Query: 121 VYPRSRSYAVTSTKSGA 137
           VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148

BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match: A0A5A7UYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00970 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 2.73e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 1   MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 60

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE  VE+K DL
Sbjct: 61  LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 120

Query: 121 VYPRSRSYAVTSTKSG 136
           VYPRS+SYAVT++KSG
Sbjct: 121 VYPRSKSYAVTNSKSG 136

BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match: A0A1S3BAI0 (uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 4.09e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 13  MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 72

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE  VE+K DL
Sbjct: 73  LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 132

Query: 121 VYPRSRSYAVTSTKSG 136
           VYPRS+SYAVT++KSG
Sbjct: 133 VYPRSKSYAVTNSKSG 148

BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match: A0A0A0LN74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1)

HSP 1 Score: 245 bits (626), Expect = 1.60e-81
Identity = 115/136 (84.56%), Postives = 128/136 (94.12%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
           +RFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 13  IRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 72

Query: 61  LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
           LVKAASVRS+DIKD+DAD++YPQR RQS GLPKSCSVGMGRIDED+ACEFE GVE+K  L
Sbjct: 73  LVKAASVRSLDIKDIDADILYPQRQRQSKGLPKSCSVGMGRIDEDTACEFEEGVEDKAHL 132

Query: 121 VYPRSRSYAVTSTKSG 136
            YPRS+SYAVT++ SG
Sbjct: 133 AYPRSKSYAVTNSNSG 148

BLAST of Cp4.1LG07g04860 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 )

HSP 1 Score: 97.4 bits (241), Expect = 9.2e-21
Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNET----- 60
           +R ++ P+RALGKA+D YVRSI  CA R  +   +      P+S SS S   + +     
Sbjct: 9   LRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFSSSASSRR 68

Query: 61  -------DDFRELVKAASVRSMDIKDVDADVVYPQRVRQST-----GLPKSCSVGMGRID 120
                  +D+ ELV+AASVRS+  K+ + D++  ++++Q       GLPKS S GM RI+
Sbjct: 69  TTDFGIDEDYSELVRAASVRSLGHKN-EIDMLIQEKLQQQKQQKQGGLPKSSSAGMARIE 128

Query: 121 EDSACEFEGGVEEK-------GDLVYPRSRSYAVTST 134
           E+   E EG V  K        DL+YPRS+SYAVT++
Sbjct: 129 EEEETE-EGSVNPKVKKTKKVSDLLYPRSKSYAVTTS 163

BLAST of Cp4.1LG07g04860 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 )

HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 66/166 (39.76%), Postives = 92/166 (55.42%), Query Frame = 0

Query: 1   MRFVTLPIRALGKAKDLYVRSIMDCAPRV--SHGYPSGQMPVLPKSYSSRSCRSNET--- 60
           +R VT+P++ L KA+DLY+RSI  CA R   S    +  +P  P+S S+ S  S+     
Sbjct: 12  LRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVP-FPRSRSTSSAFSSSASSR 71

Query: 61  ---------DDFRELVKAASVRSMDIKDVDADVVYPQRVRQST----------------G 120
                    DD+ EL++AASVRS+  K+ + D++  Q+ +Q                  G
Sbjct: 72  RRSSDFTFDDDYSELLRAASVRSLGHKN-EIDMIIQQQQQQQQQRQENRVAMGAVTVKGG 131

Query: 121 LPKSCSVG--MGRIDEDSACEFEGGV--EEKG-DLVYPRSRSYAVT 132
           LPKS SVG  M RIDE+   E EG V  ++KG D +YPRSRS+AVT
Sbjct: 132 LPKSSSVGMTMARIDEED--EEEGSVKNQKKGSDFLYPRSRSHAVT 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022951262.13.49e-94100.00uncharacterized protein LOC111454153 [Cucurbita moschata] >XP_023536942.1 unchar... [more]
KAG7020614.15.79e-9399.26hypothetical protein SDJN02_17300, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023002833.12.36e-9298.54uncharacterized protein LOC111496579 [Cucurbita maxima][more]
KAA0060962.15.65e-8486.76uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa][more]
XP_008444532.18.45e-8486.76PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo][more]
Match NameE-valueIdentityDescription
A0A6J1GH581.69e-94100.00uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC1114541... [more]
A0A6J1KUQ71.14e-9298.54uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579... [more]
A0A5A7UYI92.73e-8486.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BAI04.09e-8486.76uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=... [more]
A0A0A0LN741.60e-8184.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G10140.19.2e-2139.49Uncharacterised conserved protein UCP031279 [more]
AT1G58420.11.8e-1639.76Uncharacterised conserved protein UCP031279 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016972Uncharacterised conserved protein UCP031279PIRSFPIRSF031279UCP031279coord: 1..136
e-value: 4.6E-28
score: 96.2
NoneNo IPR availablePANTHERPTHR33526:SF13BNAC09G15340D PROTEINcoord: 1..134
NoneNo IPR availablePANTHERPTHR33526OS07G0123800 PROTEINcoord: 1..134

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g04860.1Cp4.1LG07g04860.1mRNA