Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA
mRNA sequence
ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA
Coding sequence (CDS)
ATGCGATTCGTTACACTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAAAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGAGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACAGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGTGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA
Protein sequence
MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA
Homology
BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match:
XP_022951262.1 (uncharacterized protein LOC111454153 [Cucurbita moschata] >XP_023536942.1 uncharacterized protein LOC111798173 [Cucurbita pepo subsp. pepo] >XP_023537894.1 uncharacterized protein LOC111798793 [Cucurbita pepo subsp. pepo] >KAG6585711.1 hypothetical protein SDJN03_18444, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 278 bits (711), Expect = 3.49e-94
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL
Sbjct: 72 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 131
Query: 121 VYPRSRSYAVTSTKSGA 137
VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148
BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match:
KAG7020614.1 (hypothetical protein SDJN02_17300, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 275 bits (703), Expect = 5.79e-93
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL
Sbjct: 72 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 131
Query: 121 VYPRSRSYAVTSTKSG 136
VYPRSRSYA TSTKSG
Sbjct: 132 VYPRSRSYAATSTKSG 147
BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match:
XP_023002833.1 (uncharacterized protein LOC111496579 [Cucurbita maxima])
HSP 1 Score: 273 bits (699), Expect = 2.36e-92
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRSMDIKDVDADVVYPQRVRQS GLPKSCSVGMGRIDEDSACEFE GVEEKGDL
Sbjct: 72 LVKAASVRSMDIKDVDADVVYPQRVRQSNGLPKSCSVGMGRIDEDSACEFEDGVEEKGDL 131
Query: 121 VYPRSRSYAVTSTKSGA 137
VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148
BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match:
KAA0060962.1 (uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa])
HSP 1 Score: 252 bits (643), Expect = 5.65e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 1 MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 60
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE VE+K DL
Sbjct: 61 LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 120
Query: 121 VYPRSRSYAVTSTKSG 136
VYPRS+SYAVT++KSG
Sbjct: 121 VYPRSKSYAVTNSKSG 136
BLAST of Cp4.1LG07g04860 vs. NCBI nr
Match:
XP_008444532.1 (PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo])
HSP 1 Score: 252 bits (643), Expect = 8.45e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 13 MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 72
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE VE+K DL
Sbjct: 73 LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 132
Query: 121 VYPRSRSYAVTSTKSG 136
VYPRS+SYAVT++KSG
Sbjct: 133 VYPRSKSYAVTNSKSG 148
BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match:
A0A6J1GH58 (uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC111454153 PE=4 SV=1)
HSP 1 Score: 278 bits (711), Expect = 1.69e-94
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL
Sbjct: 72 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 131
Query: 121 VYPRSRSYAVTSTKSGA 137
VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148
BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match:
A0A6J1KUQ7 (uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579 PE=4 SV=1)
HSP 1 Score: 273 bits (699), Expect = 1.14e-92
Identity = 135/137 (98.54%), Postives = 135/137 (98.54%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE
Sbjct: 12 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 71
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRSMDIKDVDADVVYPQRVRQS GLPKSCSVGMGRIDEDSACEFE GVEEKGDL
Sbjct: 72 LVKAASVRSMDIKDVDADVVYPQRVRQSNGLPKSCSVGMGRIDEDSACEFEDGVEEKGDL 131
Query: 121 VYPRSRSYAVTSTKSGA 137
VYPRSRSYAVTSTKSGA
Sbjct: 132 VYPRSRSYAVTSTKSGA 148
BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match:
A0A5A7UYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00970 PE=4 SV=1)
HSP 1 Score: 252 bits (643), Expect = 2.73e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 1 MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 60
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE VE+K DL
Sbjct: 61 LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 120
Query: 121 VYPRSRSYAVTSTKSG 136
VYPRS+SYAVT++KSG
Sbjct: 121 VYPRSKSYAVTNSKSG 136
BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match:
A0A1S3BAI0 (uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=4 SV=1)
HSP 1 Score: 252 bits (643), Expect = 4.09e-84
Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
MRFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 13 MRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 72
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRS+DIKD+DAD++YPQR+RQS GLPKSCSVGMGRIDED+ACEFE VE+K DL
Sbjct: 73 LVKAASVRSLDIKDIDADILYPQRLRQSKGLPKSCSVGMGRIDEDTACEFEESVEDKADL 132
Query: 121 VYPRSRSYAVTSTKSG 136
VYPRS+SYAVT++KSG
Sbjct: 133 VYPRSKSYAVTNSKSG 148
BLAST of Cp4.1LG07g04860 vs. ExPASy TrEMBL
Match:
A0A0A0LN74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1)
HSP 1 Score: 245 bits (626), Expect = 1.60e-81
Identity = 115/136 (84.56%), Postives = 128/136 (94.12%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRE 60
+RFVTLPIRALGKAKD YV+SIMDCAPRVSHGYPSGQ+P+LPKSYSSRSCRSNETDDFRE
Sbjct: 13 IRFVTLPIRALGKAKDFYVKSIMDCAPRVSHGYPSGQLPILPKSYSSRSCRSNETDDFRE 72
Query: 61 LVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDL 120
LVKAASVRS+DIKD+DAD++YPQR RQS GLPKSCSVGMGRIDED+ACEFE GVE+K L
Sbjct: 73 LVKAASVRSLDIKDIDADILYPQRQRQSKGLPKSCSVGMGRIDEDTACEFEEGVEDKAHL 132
Query: 121 VYPRSRSYAVTSTKSG 136
YPRS+SYAVT++ SG
Sbjct: 133 AYPRSKSYAVTNSNSG 148
BLAST of Cp4.1LG07g04860 vs. TAIR 10
Match:
AT1G10140.1 (Uncharacterised conserved protein UCP031279 )
HSP 1 Score: 97.4 bits (241), Expect = 9.2e-21
Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNET----- 60
+R ++ P+RALGKA+D YVRSI CA R + + P+S SS S + +
Sbjct: 9 LRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFSSSASSRR 68
Query: 61 -------DDFRELVKAASVRSMDIKDVDADVVYPQRVRQST-----GLPKSCSVGMGRID 120
+D+ ELV+AASVRS+ K+ + D++ ++++Q GLPKS S GM RI+
Sbjct: 69 TTDFGIDEDYSELVRAASVRSLGHKN-EIDMLIQEKLQQQKQQKQGGLPKSSSAGMARIE 128
Query: 121 EDSACEFEGGVEEK-------GDLVYPRSRSYAVTST 134
E+ E EG V K DL+YPRS+SYAVT++
Sbjct: 129 EEEETE-EGSVNPKVKKTKKVSDLLYPRSKSYAVTTS 163
BLAST of Cp4.1LG07g04860 vs. TAIR 10
Match:
AT1G58420.1 (Uncharacterised conserved protein UCP031279 )
HSP 1 Score: 83.2 bits (204), Expect = 1.8e-16
Identity = 66/166 (39.76%), Postives = 92/166 (55.42%), Query Frame = 0
Query: 1 MRFVTLPIRALGKAKDLYVRSIMDCAPRV--SHGYPSGQMPVLPKSYSSRSCRSNET--- 60
+R VT+P++ L KA+DLY+RSI CA R S + +P P+S S+ S S+
Sbjct: 12 LRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVP-FPRSRSTSSAFSSSASSR 71
Query: 61 ---------DDFRELVKAASVRSMDIKDVDADVVYPQRVRQST----------------G 120
DD+ EL++AASVRS+ K+ + D++ Q+ +Q G
Sbjct: 72 RRSSDFTFDDDYSELLRAASVRSLGHKN-EIDMIIQQQQQQQQQRQENRVAMGAVTVKGG 131
Query: 121 LPKSCSVG--MGRIDEDSACEFEGGV--EEKG-DLVYPRSRSYAVT 132
LPKS SVG M RIDE+ E EG V ++KG D +YPRSRS+AVT
Sbjct: 132 LPKSSSVGMTMARIDEED--EEEGSVKNQKKGSDFLYPRSRSHAVT 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_022951262.1 | 3.49e-94 | 100.00 | uncharacterized protein LOC111454153 [Cucurbita moschata] >XP_023536942.1 unchar... | [more] |
KAG7020614.1 | 5.79e-93 | 99.26 | hypothetical protein SDJN02_17300, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023002833.1 | 2.36e-92 | 98.54 | uncharacterized protein LOC111496579 [Cucurbita maxima] | [more] |
KAA0060962.1 | 5.65e-84 | 86.76 | uncharacterized protein E6C27_scaffold501G00970 [Cucumis melo var. makuwa] | [more] |
XP_008444532.1 | 8.45e-84 | 86.76 | PREDICTED: uncharacterized protein LOC103487823 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GH58 | 1.69e-94 | 100.00 | uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC1114541... | [more] |
A0A6J1KUQ7 | 1.14e-92 | 98.54 | uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579... | [more] |
A0A5A7UYI9 | 2.73e-84 | 86.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BAI0 | 4.09e-84 | 86.76 | uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=... | [more] |
A0A0A0LN74 | 1.60e-81 | 84.56 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G10140.1 | 9.2e-21 | 39.49 | Uncharacterised conserved protein UCP031279 | [more] |
AT1G58420.1 | 1.8e-16 | 39.76 | Uncharacterised conserved protein UCP031279 | [more] |