Cp4.1LG07g04820 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g04820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDNA excision repair protein ERCC-8-like isoform X2
LocationCp4.1LG07: 3414466 .. 3419777 (-)
RNA-Seq ExpressionCp4.1LG07g04820
SyntenyCp4.1LG07g04820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATGCATGTTAGAAGTTTGGGCCAAATTGTTTGTTCTGCGTACGCGTAAGTTTGGATCTGCTAGCCCTAATCGCAGGGAAGCCCAAAGCGATCATCTTTCGTCTCTCCGAGTCCCAATAATAATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACGAAGAAGGAGAAACAGAGAGCACCGAATCAAGAGGAAGCTTCAATTGGTGGCCTCCGAATTGGGGTTGGAGAGAAGGGTAAAACATCCTTGGACTTGACAGATTTTCGACGCAGTGTTTGAAGGAATCAAGTGGGGGAGATACTGTTGCAGGAAAATAGATAGAGACAGAGAGGAAGATACAGCGTTTTTGCATGAGGGCAAAGATGCTTGGAGAATGTGGAAGGATATTAGAGATAGAGAAGCGGGAAAACTCCGCCCAAATTCTTTTGCTAATCGTGTTAAATCCGATCGAGTCAGCAGTCTGCAACTTTCCAATCATAAGGACATTGTCTCTCCCCATCGAGGTTCCGTCAACTCACTTCAGGTAATCCTAGATTTCTTATCCTACATTCAAACAATTTGCATTTTAATGGATTTGAATGAACGAAGTTGGAAATTGTTCGATTATAGTTTCTTTCTGGTTTGAGTTTAGATCTTTTCGCTGTCCAACTTAGTTCTTTTTTGGCCATGTTGAATTCGTTTGGGGTGTTATTTACTTGTTGTAATTATCGGATTAGATTGTAAGTTTCCTATTTCTGCTAATCGCACGCTTGACATAATTAATTATTGCCCTCGGGTTGTATTCATTTCTATTAATTGCACAACGCGAAAAAGGAAAGGAGAAGTCTAGTTTGTGGATTTTCCATTTAGTATTGTGACCTACCATAGAAACCAAAAACCTTTAATCGTGTGTAGCGACCGGAGTAGCTGGAATTCTAGGTTCTATCGGTGTAGTTCTAGTTGGAATTTGATGTTGCCGATTGACGGTGGAGGACCCAAACCAGAAGGGAGAAGGATACCATGAAGCTTGAGCCAGGAGAGGCAGAAGAGAGACAACAAAAGAACTTAGAAAACGTGAATGAGCTAAGATTCACCGAGGAAAAATTGTATTAAATAGGCTAAGCTTGTAATGGTTAAATCACCGATGAACCCAAAAGCTTATGCTGATGGGTTATGATAAATTTAGTATATCGACGTTTAAACACTCTTCCCTCAATTGTGGACTTGGAAACTTATAAGCGAAAATCACTATTAATTGGGGGGAATAACTTTATAGGGGTTTGAACACAAGCGCTCTTTCTTTGATACCATGTTAAATCACCAATTAACTCCGAAGTAACTCCAAAGCTTAGCTTTAAGTTGATGGGTTATAGTAAATTGAAATATATCAACACTTTAATGGTAACAAACCCATAAAAGTGGCAGCGTATGAAAATTAAATGAACATAACAGAAAGTAAGGATCACAAGGGCCGAATACGCAAAAGTTAATAAAAAAATAATAAAAGTTGTAGTAAAATCCTCCTGAAATGGTTGTTTAACACTTCAACATCTTAATAAGGTCTTCATTGACTTTATGTTCTTAATTGTGCTCTCCTAAGTCAGAATCAGGAGTTAGGATAACTTCTGTTGATTATAGAGAAGTTTTCATTTTGGAACTTTCTAAAGTTGCTGAGTTTATAATTGGACTATGTTTACCTTTTGGAAAACTGATTCCGTTTTGAACCAAGTGGAGAACTACAAAGGATAAGTCTATAGAGCAACTTGAAATCCTTTTTGGATTTATGACTACAACAAAAATATAAACTCAATTTGTTGCATCATATAGGTCTTTGTTTTTCACTTACCCCGCAGAATTAGCTTAATATTATTCTTTTTTTAAGCTTGACTTCAGTATATGTCATGCATAGGCAATAAAATTTTCGAACACATGTCACAAAGAGCAATCTTTAGTAAGCATTTTATCTGATTGACATTGGTGTTCTTTTATAATTATTGTTCTATTGATAACTCTATTAACATATTTTATATTTATTTTACCTCATTCTGTTTCTTCTGAATTTCAATATTCTTTTAGGTCGATTATGGTCTTGTAGCCCAACCACCATGGTTGGCCCAATCGTTAAAGAAGCAAAAATTTTAAAGCTAGATGGTCTTTGAGGTCATGGGTTTAAACCATGGTGGCTCATAGGATATGAAATATTCCATGAGTTCTTGACATCAAATATTGTAGAGCCAAGCACATTGTGCCCTGAGAGTAGTCAAGGCGCATGTAAGTTGGCTTGAACACTTGTGGCTATTAAAGGAAGTTTGGTGTTGTAGAGCTAGTTGAGTGTTTGGATTTTATAAGCTTGATTTTTGTTGATTTCATTCTTTAGTAGGTATCTCTGTTCCATTTTCATAACATGCTTATAAAACTAATAAGAACATCTAGCACCGACATTCTGGGTCATGAAATCAGGTTGATTTGACGGAGGGGAGATATTTGTTATCTGGAGCATCAGATGCATCGGCTGCTGTTTTTGATATTCAACGTGCATCTCATTCTGAGGGTCTTATTGCAAAATACCAATGCCTTTTTGCAGTTGATAAGCAGCATGAACATGGACATAAATATGCAATTTCCTCGGCCATATGGTATCCCATTGATACTGGATTGTTTGTCACAGGTTCATATGATCATCACATTAATGTCTGGGATACAAATACAACTCAGGTAGGTAACTTAGAGATCATGTGGGTCTTACCAGCAATTTTGTTATAAACTAATATTTCCTTCTTGTAGGTGGTGGTGAACTTTAAATTGCCTGGAAAAGTCTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCTGCTGGAACGGAAGATGTTCAAGTCCGCCTTTGTGATATTTCATCGGGAGCATTTTCTCACACCTTATCTGGACATCGTGGTATGGTGGTGGTCTCTACTTTTAATTCTAAGAGAGTTGTTGCTGTCTTTAAGTTGTACCAATTGTTTTAGTTTCAAAATATTACAGCAATTGCAGTCCGTAGTTTTAATCAATTTGTGGAAGATGTCAATACCTGTATGACAAACATGTGCCCCCTTCCAGTTTTACTTTCCCATTGTGTAGTACTTTACCCGTTTTACAATTTGCAACACCTGATTGTTTATGAAATTTATTCGACCAGTCTTTTCTGTTTTGCCTATCTATCTATGTAAATCATATCTATTGACATTAATGTTTATATTATCATTTTACAGATGGTGTAATGAGTGTAGAATGGTCAGCTTCTAGCGAGTGGGTTTTGATTACTGGCGGATGTGATGGAGCAATTCGTTTTTGGGACATCAGACGAGCTGGATGTTTTCGTGTTCTAGATCAGTCTCAATCCCAGCTCGGGCGACGTCCACCTATTTCAGGATGGACTGCAAATAAGGTCCCTCTCCTCCCTAGTTTGGCTATCACGGTATCCACCAGTTCTTTTGTTTGTCAATTAACAGATTTTATTTTATTATTTCTCAGCTATCAACATCTAAGTCCCACTTGGCCAGCCAAGGTTCAAATATGAAATCTCGCATACTTCATAAGAAACTAGCCAATGGAAACGCAACAAAGCCATCATCTACTACAGGTAAACTGCCAGCTAAGGGATCCACAAGGCAGAGGCTACACCCAGGGCTTTTGTCCAGCCAGGATCGAGCAGTTTCTCACTACGGTGCTGTTACTGGATTAAAAGTAACTGGAGATGGCATGTACCTTCTCAGTGCAGGTGGAGTTACCCTGTCAACCCTTTCCAATCCAATTAAATATAGTTCAACTGTGTTATATTCATTTTTTTCTTGAATTAATCGTCTATTAAAAGCCATGATTCTCCTAGTATGCGGCTGCCGGACATCGTGCCTTGATGGAGGAAAAATTAGTGGATTGATTAAGTTGAAGCACAAGGGGAATTTAAAATGTGAACGCCATTAGACTTTGATTATAAAAGAAAATTCCTATAATTGAGTATTTTGAAAATCCTTTTGTACATGTTAGTCATGTACCCTACTTCTGGTGATAATGATGCTGATAGGAGTGTTGAAATATCAATAACAAGATCTGCATTAATGTTATTCTAACAAATCTTGATAGTTGGAGAATTGAGTTCTTTATTAGACCCTCTATCTGCTTTGTGATATAATTAAATCTACTAACGACAATTCATTAGCAATATCTTCTTGTTTGAATTTCTTTTTTCACGATCGGTTGAGGTAGTCATGTTATACTGTTATTCCCCCATCCCACCCCCATATAAAATGATCAGATGTTAAATTTGGATTTTGATTCCAGGTTCTGATTCAAGGTTAAAGTTGTGGGATGTCGAATCCGGGTGTAATACGCTCGTGAATTATGAAACCGTGAGGTTACATACCAATAAGCCGTTGCAATTAGCCACATCTCAAGACTCAGCCCTTGTATTTGCTCCATGCATGGCAAATATTAAAGTACATACTTCTTCCTATATCTTTTAGCTTCTTTGTGTCTACAGCTTACGTGTAATCTAGTTAACTTCTTGAACTTTTAGGCATTTGATATGTGGACAGGGAAGGCATCCCTGACGCTCAGCGGCCATTACGAAGCTGTGAACTGTTGCTTGTATAGTTTCCAGGATCAGGTACGGTTGGTTCAACTGAATTCGAAAAATTGTGGACCAAATGATAAAAGTTGCTTCAAAATTTTGCAATGTTCTTCAGGAACTGTACACTGGTGGCAACGATAGGCAAATTCTCGTCTGGTCACCATCCCGGGACTCTACCGAACTGGTACATCTTCTGAACTCATGCCCCTGCATGTAATGGAATTGAATAACTCTGGATTTGCTTTCCATTAATATCAATGAAGTTTCCTGGTAGCTTATTCCATTTTAGTGGACTCGCAGGATTGGGAATCCAGTGCAGACAAAGATAACTGGAGCGACTGATTGTCCTCTTCCACAAGGACGTTCGGTTTCAACGCTGATGCCATCCATAAAACTCTGCCCACCATGTACATAACTTTCCAGATTTGTATCATCTTTGAATGATTCTGCCCTCTCTTTCAAACTGTCAACTAGGACGTGCACTATACTATAGCGTGGACTTGAAAAAACTCCACACCTTGTTCATTAGTAATAAACATGTTTCAAACTAAAGCCACGTTGGGTTTGACTTTGTAGCTTTTTCATCGAGCTTGGTAACTTTGTTATAATGTCTTGGATTCGCAATTATATGATTGAAAACTTGGGTTTGTTCTAGAATGATACTGTCATGATTTGGAAAAAGTGAGTTACATGGATATA

mRNA sequence

AGATGCATGTTAGAAGTTTGGGCCAAATTGTTTGTTCTGCGTACGCGTAAGTTTGGATCTGCTAGCCCTAATCGCAGGGAAGCCCAAAGCGATCATCTTTCGTCTCTCCGAGTCCCAATAATAATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAACGAAGAAGGAGAAACAGAGAGCACCGAATCAAGAGGAAGCTTCAATTGGTGGCCTCCGAATTGGGGTTGGAGAGAAGGGTAAAACATCCTTGGACTTGACAGATTTTCGACGCAGTGTTTGAAGGAATCAAGTGGGGGAGATACTGTTGCAGGAAAATAGATAGAGACAGAGAGGAAGATACAGCGTTTTTGCATGAGGGCAAAGATGCTTGGAGAATGTGGAAGGATATTAGAGATAGAGAAGCGGGAAAACTCCGCCCAAATTCTTTTGCTAATCGTGTTAAATCCGATCGAGTCAGCAGTCTGCAACTTTCCAATCATAAGGACATTGTCTCTCCCCATCGAGGTTCCGTCAACTCACTTCAGGTTGATTTGACGGAGGGGAGATATTTGTTATCTGGAGCATCAGATGCATCGGCTGCTGTTTTTGATATTCAACGTGCATCTCATTCTGAGGGTCTTATTGCAAAATACCAATGCCTTTTTGCAGTTGATAAGCAGCATGAACATGGACATAAATATGCAATTTCCTCGGCCATATGGTATCCCATTGATACTGGATTGTTTGTCACAGGTTCATATGATCATCACATTAATGTCTGGGATACAAATACAACTCAGGTGGTGGTGAACTTTAAATTGCCTGGAAAAGTCTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCTGCTGGAACGGAAGATGTTCAAGTCCGCCTTTGTGATATTTCATCGGGAGCATTTTCTCACACCTTATCTGGACATCGTGCAATTGCAGTCCGTAGTTTTAATCAATTTGTGGAAGATGTCAATACCTATGGTGTAATGAGTGTAGAATGGTCAGCTTCTAGCGAGTGGGTTTTGATTACTGGCGGATGTGATGGAGCAATTCGTTTTTGGGACATCAGACGAGCTGGATGTTTTCGTGTTCTAGATCAGTCTCAATCCCAGCTCGGGCGACGTCCACCTATTTCAGGATGGACTGCAAATAAGCTATCAACATCTAAGTCCCACTTGGCCAGCCAAGGTTCAAATATGAAATCTCGCATACTTCATAAGAAACTAGCCAATGGAAACGCAACAAAGCCATCATCTACTACAGGTAAACTGCCAGCTAAGGGATCCACAAGGCAGAGGCTACACCCAGGGCTTTTGTCCAGCCAGGATCGAGCAGTTTCTCACTACGGTGCTGTTACTGGATTAAAAGTAACTGGAGATGGCATGTACCTTCTCAGTGCAGGTTCTGATTCAAGGTTAAAGTTGTGGGATGTCGAATCCGGGTGTAATACGCTCGTGAATTATGAAACCGTGAGGTTACATACCAATAAGCCGTTGCAATTAGCCACATCTCAAGACTCAGCCCTTGTATTTGCTCCATGCATGGCAAATATTAAAGCATTTGATATGTGGACAGGGAAGGCATCCCTGACGCTCAGCGGCCATTACGAAGCTGTGAACTGTTGCTTGTATAGTTTCCAGGATCAGGAACTGTACACTGGTGGCAACGATAGGCAAATTCTCGTCTGGTCACCATCCCGGGACTCTACCGAACTGGATTGGGAATCCAGTGCAGACAAAGATAACTGGAGCGACTGATTGTCCTCTTCCACAAGGACGTTCGGTTTCAACGCTGATGCCATCCATAAAACTCTGCCCACCATGTACATAACTTTCCAGATTTGTATCATCTTTGAATGATTCTGCCCTCTCTTTCAAACTGTCAACTAGGACGTGCACTATACTATAGCGTGGACTTGAAAAAACTCCACACCTTGTTCATTAGTAATAAACATGTTTCAAACTAAAGCCACGTTGGGTTTGACTTTGTAGCTTTTTCATCGAGCTTGGTAACTTTGTTATAATGTCTTGGATTCGCAATTATATGATTGAAAACTTGGGTTTGTTCTAGAATGATACTGTCATGATTTGGAAAAAGTGAGTTACATGGATATA

Coding sequence (CDS)

ATGTGGAAGGATATTAGAGATAGAGAAGCGGGAAAACTCCGCCCAAATTCTTTTGCTAATCGTGTTAAATCCGATCGAGTCAGCAGTCTGCAACTTTCCAATCATAAGGACATTGTCTCTCCCCATCGAGGTTCCGTCAACTCACTTCAGGTTGATTTGACGGAGGGGAGATATTTGTTATCTGGAGCATCAGATGCATCGGCTGCTGTTTTTGATATTCAACGTGCATCTCATTCTGAGGGTCTTATTGCAAAATACCAATGCCTTTTTGCAGTTGATAAGCAGCATGAACATGGACATAAATATGCAATTTCCTCGGCCATATGGTATCCCATTGATACTGGATTGTTTGTCACAGGTTCATATGATCATCACATTAATGTCTGGGATACAAATACAACTCAGGTGGTGGTGAACTTTAAATTGCCTGGAAAAGTCTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCTGCTGGAACGGAAGATGTTCAAGTCCGCCTTTGTGATATTTCATCGGGAGCATTTTCTCACACCTTATCTGGACATCGTGCAATTGCAGTCCGTAGTTTTAATCAATTTGTGGAAGATGTCAATACCTATGGTGTAATGAGTGTAGAATGGTCAGCTTCTAGCGAGTGGGTTTTGATTACTGGCGGATGTGATGGAGCAATTCGTTTTTGGGACATCAGACGAGCTGGATGTTTTCGTGTTCTAGATCAGTCTCAATCCCAGCTCGGGCGACGTCCACCTATTTCAGGATGGACTGCAAATAAGCTATCAACATCTAAGTCCCACTTGGCCAGCCAAGGTTCAAATATGAAATCTCGCATACTTCATAAGAAACTAGCCAATGGAAACGCAACAAAGCCATCATCTACTACAGGTAAACTGCCAGCTAAGGGATCCACAAGGCAGAGGCTACACCCAGGGCTTTTGTCCAGCCAGGATCGAGCAGTTTCTCACTACGGTGCTGTTACTGGATTAAAAGTAACTGGAGATGGCATGTACCTTCTCAGTGCAGGTTCTGATTCAAGGTTAAAGTTGTGGGATGTCGAATCCGGGTGTAATACGCTCGTGAATTATGAAACCGTGAGGTTACATACCAATAAGCCGTTGCAATTAGCCACATCTCAAGACTCAGCCCTTGTATTTGCTCCATGCATGGCAAATATTAAAGCATTTGATATGTGGACAGGGAAGGCATCCCTGACGCTCAGCGGCCATTACGAAGCTGTGAACTGTTGCTTGTATAGTTTCCAGGATCAGGAACTGTACACTGGTGGCAACGATAGGCAAATTCTCGTCTGGTCACCATCCCGGGACTCTACCGAACTGGATTGGGAATCCAGTGCAGACAAAGATAACTGGAGCGACTGA

Protein sequence

MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCCLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD
Homology
[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy Swiss-Prot
Match: Q93ZG3 (WD repeat-containing protein ATCSA-1 OS=Arabidopsis thaliana OX=3702 GN=ATCSA-1 PE=1 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 2.6e-173
Identity = 310/467 (66.38%), Postives = 361/467 (77.30%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MW+ I+DRE G++R NSFANR KS R+ SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSE--GLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFV 120
           SGA+D SAAVFD+QRA+  E  GLIAK++C+F VDKQHE+GHKYAISSAIWYPIDTGLF+
Sbjct: 61  SGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SG
Sbjct: 121 TGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAG 240
           AFSHTLSGHR                 GVMSVEWS SSEWVL TGGCDGAIRFWDIRRAG
Sbjct: 181 AFSHTLSGHRD----------------GVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAG 240

Query: 241 CFRVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSST 300
           CFRVLDQSQ+QLG RPPI   TA     S    +S G   + + L  K     + K SS 
Sbjct: 241 CFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSS- 300

Query: 301 TGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVES 360
           + K   + S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ES
Sbjct: 301 SAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIES 360

Query: 361 GCNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVN 420
           G NTLVN+ET R+ TNK +QL TS D ALVF PCM  +KAF MW+G+ +L L GHYE+VN
Sbjct: 361 GRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVN 420

Query: 421 CCLYSFQDQELYTGGNDRQILVWSP--SRDSTELDWESSADKDNWSD 464
            C ++  DQELYT G+DRQILVWSP  + +   +  E + DKDNWSD
Sbjct: 421 TCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDKDNWSD 450

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy Swiss-Prot
Match: Q5BIM8 (DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN=ERCC8 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-61
Identity = 141/440 (32.05%), Postives = 206/440 (46.82%), Query Frame = 0 

Query: 8   REAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDAS 67
           R+AG   P        + RV  L+L+  +D+   H   VN+L ++  EGRY+LSG SD  
Sbjct: 8   RQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYMLSGGSDGV 67

Query: 68  AAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTGSYDHHIN 127
             ++D++ +S       K  C  +V + H   HKY++ +  WYP DTG+F + S+D  + 
Sbjct: 68  IVLYDLENSSRQPYYTCKAVC--SVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLK 127

Query: 128 VWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGH 187
           VWDTNT Q+   F     VY   MS +AT H L+A GT   +V+LCD+ SG+ SH L GH
Sbjct: 128 VWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 187

Query: 188 RAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRA-GCFRVLDQS 247
           R                  +++V WS   E++L T   D   + WD+RRA GC   LDQ 
Sbjct: 188 R----------------QEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQ- 247

Query: 248 QSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTGKLPAKG 307
                                K   A++ +N                             
Sbjct: 248 ------------------HNGKKSQAAESAN----------------------------- 307

Query: 308 STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNY 367
                             +H G V GL  T DG++LL+ G+D+R++LW+  +G NTLVNY
Sbjct: 308 -----------------TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNY 364

Query: 368 ETVRLHTNKPLQLATSQ--DSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCCLYSF 427
             V   + K L+   S    S  VF P  + I  + +++G+    L GHY++V+CC++  
Sbjct: 368 GKVYNDSRKGLKFTVSSGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQS 364

Query: 428 QDQELYTGGNDRQILVWSPS 445
             QELY+G  D  IL W PS
Sbjct: 428 NFQELYSGSRDCNILAWVPS 364

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy Swiss-Prot
Match: Q8CFD5 (DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 GN=Ercc8 PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 6.1e-61
Identity = 142/439 (32.35%), Postives = 204/439 (46.47%), Query Frame = 0 

Query: 8   REAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDAS 67
           R++G   P        + RV  L+L+  +D+   H   VN+L ++  EGRY+LSG SD  
Sbjct: 8   RQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGV 67

Query: 68  AAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTGSYDHHIN 127
             ++D++ AS       K  C  +V + H   HKY++ +  WYP DTG+F + S+D  + 
Sbjct: 68  VVLYDLENASRQPHYTCKAVC--SVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLK 127

Query: 128 VWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGH 187
           VWDTNT Q    F     VY   MS  AT H L+A GT   +V+LCD+ SG+ SH L GH
Sbjct: 128 VWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 187

Query: 188 RAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRA-GCFRVLDQS 247
           R                  +++V WS   +++L T   D  ++ WD+RRA GC   LDQ 
Sbjct: 188 R----------------QEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQ- 247

Query: 248 QSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTGKLPAKG 307
                                K   A++ +N                             
Sbjct: 248 ------------------HNGKKSQAAESAN----------------------------- 307

Query: 308 STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNY 367
                             +H G V GL  T DG++LL+ G+D+R++LW+  SG NTLVNY
Sbjct: 308 -----------------TAHNGKVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGDNTLVNY 363

Query: 368 ETVRLHTNKPLQLATS--QDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCCLYSF 427
             V   + K LQ A S    S  VF P  + I  + + +G+    L GHY++V+CC++  
Sbjct: 368 GKVCNDSRKGLQFAVSCGCSSEFVFVPHGSTIAVYAVHSGERLAMLKGHYKSVDCCVFQP 363

Query: 428 QDQELYTGGNDRQILVWSP 444
             QELY+G  D  IL W P
Sbjct: 428 NFQELYSGSRDCNILAWVP 363

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy Swiss-Prot
Match: Q13216 (DNA excision repair protein ERCC-8 OS=Homo sapiens OX=9606 GN=ERCC8 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 5.1e-60
Identity = 136/440 (30.91%), Postives = 205/440 (46.59%), Query Frame = 0 

Query: 8   REAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDAS 67
           R+ G   P        + RV  L+L+  +D+   H G +N+L ++  EGRY+LSG SD  
Sbjct: 8   RQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGV 67

Query: 68  AAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTGSYDHHIN 127
             ++D++ +S       K  C  ++ + H   H+Y++ +  WYP DTG+F + S+D  + 
Sbjct: 68  IVLYDLENSSRQSYYTCKAVC--SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLK 127

Query: 128 VWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGH 187
           VWDTNT Q    F     VY   MS ++T H L+A GT   +V+LCD+ SG+ SH L GH
Sbjct: 128 VWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 187

Query: 188 RAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRA-GCFRVLDQS 247
           R                  +++V WS   +++L T   D  ++ WD+RRA GC   LDQ 
Sbjct: 188 R----------------QEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ- 247

Query: 248 QSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTGKLPAKG 307
                                K   A + +N                             
Sbjct: 248 ------------------HNGKKSQAVESAN----------------------------- 307

Query: 308 STRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNY 367
                             +H G V GL  T DG++LL+ G+D+R++LW+  +G NTLVNY
Sbjct: 308 -----------------TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNY 364

Query: 368 ETVRLHTNKPLQLATS--QDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCCLYSF 427
             V  ++ K L+   S    S  VF P  + I  + +++G+    L GHY+ V+CC++  
Sbjct: 368 GKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS 364

Query: 428 QDQELYTGGNDRQILVWSPS 445
             QELY+G  D  IL W PS
Sbjct: 428 NFQELYSGSRDCNILAWVPS 364

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy Swiss-Prot
Match: Q9USR0 (DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ckn1 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-41
Identity = 126/449 (28.06%), Postives = 192/449 (42.76%), Query Frame = 0 

Query: 8   REAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPH----RGSVNSLQVDLTEGRYLLSGA 67
           RE G+   +SF  ++   R+  L L+    I   H     GSVN+L +D T  + ++SG 
Sbjct: 8   REWGQEPNSSFRRQLLQHRLQRLALNPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSGG 67

Query: 68  SDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTGSYD 127
           +++S  V+D+Q     E        L AV  +    HK+ I+   W+P D G+F + S+D
Sbjct: 68  ANSSINVWDLQNIDQKEDEDLILDTLNAVPAR--TSHKFGITDLHWFPFDNGIFTSSSFD 127

Query: 128 HHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHT 187
           H + VWD +T Q    F +   +Y  A S +A SH LIA       +RLCD+ SG+++H+
Sbjct: 128 HTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIA-SHCLIATAYRSSSIRLCDMQSGSYTHS 187

Query: 188 LSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVL 247
           LSGH                T  V++V+W   +E+VL +G  DG  R WDIR+       
Sbjct: 188 LSGH----------------TGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKV------ 247

Query: 248 DQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTGKLP 307
                                           S+     LH K    N T          
Sbjct: 248 -------------------------------SSSFACMDLHNKYLPSNQTN--------- 307

Query: 308 AKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTL 367
                               +SHYG V GL  T D  YL S G+D R+++W++ESG NTL
Sbjct: 308 --------------------ISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTL 367

Query: 368 VNYETVRLHTN------KPLQLATSQDS--ALVFAPCMANIKAFDMWTGKASLTLSGH-Y 427
             +  + +H         P  +  S DS   ++F     ++   ++  G     LS H  
Sbjct: 368 REFGPI-IHNQTTSFAVHPCMIQPSMDSDVFVLFPNDDGSLALLNLLEGSFVRRLSTHSL 370

Query: 428 EAVNCCLYSFQDQELYTGGNDRQILVWSP 444
           + +NC  Y    ++ +TG  +  I +WSP
Sbjct: 428 KRINCAAYRPDFEQCFTGDMNGNIYMWSP 370

[Close]
BLAST of Cp4.1LG07g04820 vs. NCBI nr
Match: XP_023537496.1 (DNA excision repair protein ERCC-8-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 889 bits (2297), Expect = 0.0
Identity = 446/463 (96.33%), Postives = 446/463 (96.33%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC
Sbjct: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 463
           LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD
Sbjct: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 447

[Close]
BLAST of Cp4.1LG07g04820 vs. NCBI nr
Match: XP_022951020.1 (DNA excision repair protein ERCC-8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 885 bits (2288), Expect = 0.0
Identity = 444/463 (95.90%), Postives = 445/463 (96.11%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQ SNMKSRILHKKL+NGNATKPSSTTG
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQSSNMKSRILHKKLSNGNATKPSSTTG 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC
Sbjct: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 463
           LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD
Sbjct: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 447

[Close]
BLAST of Cp4.1LG07g04820 vs. NCBI nr
Match: XP_023002628.1 (DNA excision repair protein ERCC-8-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 446/464 (96.12%), Postives = 446/464 (96.12%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLA-NGNATKPSSTT 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLA NGNATKPSSTT
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLATNGNATKPSSTT 300

Query: 301 GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG 360
           GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG
Sbjct: 301 GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG 360

Query: 361 CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC 420
           CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC
Sbjct: 361 CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC 420

Query: 421 CLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 463
           CLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD
Sbjct: 421 CLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 448

[Close]
BLAST of Cp4.1LG07g04820 vs. NCBI nr
Match: XP_023537495.1 (DNA excision repair protein ERCC-8-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 862 bits (2226), Expect = 3.56e-314
Identity = 433/450 (96.22%), Postives = 433/450 (96.22%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC
Sbjct: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTEL 450
           LYSFQDQELYTGGNDRQILVWSPSRDSTEL
Sbjct: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTEL 434

[Close]
BLAST of Cp4.1LG07g04820 vs. NCBI nr
Match: KAG6585706.1 (WD repeat-containing protein ATCSA-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 860 bits (2222), Expect = 1.47e-313
Identity = 432/450 (96.00%), Postives = 432/450 (96.00%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVNYETVRLHTNKPLQLATSQDSALVFAPCM NIKAFDMWTGKASLTLSGHYEAVNCC
Sbjct: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMTNIKAFDMWTGKASLTLSGHYEAVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTEL 450
           LYSFQDQELYTGGNDRQILVWSPSRDSTEL
Sbjct: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTEL 434

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy TrEMBL
Match: A0A6J1GHF8 (DNA excision repair protein ERCC-8-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453993 PE=4 SV=1)

HSP 1 Score: 885 bits (2288), Expect = 0.0
Identity = 444/463 (95.90%), Postives = 445/463 (96.11%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQ SNMKSRILHKKL+NGNATKPSSTTG
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQSSNMKSRILHKKLSNGNATKPSSTTG 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC
Sbjct: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 463
           LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD
Sbjct: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 447

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy TrEMBL
Match: A0A6J1KU48 (DNA excision repair protein ERCC-8-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496429 PE=4 SV=1)

HSP 1 Score: 884 bits (2285), Expect = 0.0
Identity = 446/464 (96.12%), Postives = 446/464 (96.12%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLA-NGNATKPSSTT 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLA NGNATKPSSTT
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLATNGNATKPSSTT 300

Query: 301 GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG 360
           GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG
Sbjct: 301 GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG 360

Query: 361 CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC 420
           CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC
Sbjct: 361 CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC 420

Query: 421 CLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 463
           CLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD
Sbjct: 421 CLYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 448

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy TrEMBL
Match: A0A6J1GHI5 (DNA excision repair protein ERCC-8-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453993 PE=4 SV=1)

HSP 1 Score: 858 bits (2217), Expect = 4.13e-313
Identity = 431/450 (95.78%), Postives = 432/450 (96.00%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQ SNMKSRILHKKL+NGNATKPSSTTG
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQSSNMKSRILHKKLSNGNATKPSSTTG 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC
Sbjct: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTEL 450
           LYSFQDQELYTGGNDRQILVWSPSRDSTEL
Sbjct: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTEL 434

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy TrEMBL
Match: A0A6J1KK17 (DNA excision repair protein ERCC-8-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496429 PE=4 SV=1)

HSP 1 Score: 857 bits (2214), Expect = 1.23e-312
Identity = 433/451 (96.01%), Postives = 433/451 (96.01%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLA-NGNATKPSSTT 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLA NGNATKPSSTT
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLATNGNATKPSSTT 300

Query: 301 GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG 360
           GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG
Sbjct: 301 GKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESG 360

Query: 361 CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC 420
           CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC
Sbjct: 361 CNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNC 420

Query: 421 CLYSFQDQELYTGGNDRQILVWSPSRDSTEL 450
           CLYSFQDQELYTGGNDRQILVWSPSRDSTEL
Sbjct: 421 CLYSFQDQELYTGGNDRQILVWSPSRDSTEL 435

[Close]
BLAST of Cp4.1LG07g04820 vs. ExPASy TrEMBL
Match: A0A1S3BA40 (DNA excision repair protein ERCC-8-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103487838 PE=4 SV=1)

HSP 1 Score: 840 bits (2171), Expect = 1.41e-306
Identity = 420/463 (90.71%), Postives = 433/463 (93.52%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDR SSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGASDASAAVFDIQRA+HSEGLIAK+QC+FAVDKQHEHGHKYAISSAIWYP+DTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQSQLGRRPPISGWTANKLSTSKS LASQG NMKSRI HKKL NGNATKPSST G
Sbjct: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSLLASQGPNMKSRIPHKKLGNGNATKPSST-G 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           KLPAKGSTRQRLHPGLLS QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC
Sbjct: 301 KLPAKGSTRQRLHPGLLSGQDRSVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVN+ET+RL TNKPLQLATSQDS+LVFAPCMA +KAFDMWTGK SLTLSGHYE VNCC
Sbjct: 361 NTLVNFETMRLQTNKPLQLATSQDSSLVFAPCMATVKAFDMWTGKTSLTLSGHYEGVNCC 420

Query: 421 LYSFQDQELYTGGNDRQILVWSPSRDSTELDWESSADKDNWSD 463
            Y+F DQELYTGGNDRQILVWSPSR+STELDWES+ADKDNWSD
Sbjct: 421 WYNFPDQELYTGGNDRQILVWSPSRNSTELDWESTADKDNWSD 446

[Close]
BLAST of Cp4.1LG07g04820 vs. TAIR 10
Match: AT1G27840.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 609.8 bits (1571), Expect = 1.9e-174
Identity = 310/467 (66.38%), Postives = 361/467 (77.30%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MW+ I+DRE G++R NSFANR KS R+ SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSE--GLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFV 120
           SGA+D SAAVFD+QRA+  E  GLIAK++C+F VDKQHE+GHKYAISSAIWYPIDTGLF+
Sbjct: 61  SGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SG
Sbjct: 121 TGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAG 240
           AFSHTLSGHR                 GVMSVEWS SSEWVL TGGCDGAIRFWDIRRAG
Sbjct: 181 AFSHTLSGHRD----------------GVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAG 240

Query: 241 CFRVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSST 300
           CFRVLDQSQ+QLG RPPI   TA     S    +S G   + + L  K     + K SS 
Sbjct: 241 CFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSS- 300

Query: 301 TGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVES 360
           + K   + S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ES
Sbjct: 301 SAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIES 360

Query: 361 GCNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVN 420
           G NTLVN+ET R+ TNK +QL TS D ALVF PCM  +KAF MW+G+ +L L GHYE+VN
Sbjct: 361 GRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVN 420

Query: 421 CCLYSFQDQELYTGGNDRQILVWSP--SRDSTELDWESSADKDNWSD 464
            C ++  DQELYT G+DRQILVWSP  + +   +  E + DKDNWSD
Sbjct: 421 TCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDKDNWSD 450

[Close]
BLAST of Cp4.1LG07g04820 vs. TAIR 10
Match: AT1G27840.3 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 605.1 bits (1559), Expect = 4.6e-173
Identity = 310/468 (66.24%), Postives = 361/468 (77.14%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MW+ I+DRE G++R NSFANR KS R+ SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSE--GLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFV 120
           SGA+D SAAVFD+QRA+  E  GLIAK++C+F VDKQHE+GHKYAISSAIWYPIDTGLF+
Sbjct: 61  SGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SG
Sbjct: 121 TGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAG 240
           AFSHTLSGHR                 GVMSVEWS SSEWVL TGGCDGAIRFWDIRRAG
Sbjct: 181 AFSHTLSGHRD----------------GVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAG 240

Query: 241 CFRVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSST 300
           CFRVLDQSQ+QLG RPPI   TA     S    +S G   + + L  K     + K SS 
Sbjct: 241 CFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSS- 300

Query: 301 TGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVES 360
           + K   + S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ES
Sbjct: 301 SAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIES 360

Query: 361 GCNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIK-AFDMWTGKASLTLSGHYEAV 420
           G NTLVN+ET R+ TNK +QL TS D ALVF PCM  +K AF MW+G+ +L L GHYE+V
Sbjct: 361 GRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKVAFGMWSGRTTLMLRGHYESV 420

Query: 421 NCCLYSFQDQELYTGGNDRQILVWSP--SRDSTELDWESSADKDNWSD 464
           N C ++  DQELYT G+DRQILVWSP  + +   +  E + DKDNWSD
Sbjct: 421 NTCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDKDNWSD 451

[Close]
BLAST of Cp4.1LG07g04820 vs. TAIR 10
Match: AT1G19750.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 586.3 bits (1510), Expect = 2.2e-167
Identity = 299/467 (64.03%), Postives = 352/467 (75.37%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWK  +DRE G+ R NSFANR KS R+ SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKAFKDRETGRFRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSE--GLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFV 120
           SGA+D SAAVFD++RA+  E  GLIAK++C+F V KQHE+GHKYAISSAIWYPIDTG+F+
Sbjct: 61  SGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHKYAISSAIWYPIDTGMFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGS+DH++ VWDTNT+QVVV+FK+PGKVYRTAMSS+A SH LIAAGT+DVQVRLCDI+SG
Sbjct: 121 TGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAG 240
           AFSHTLSGHR                 GVMSVEWS SSEWVL TGGCDGAIRFWDIRRAG
Sbjct: 181 AFSHTLSGHRD----------------GVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAG 240

Query: 241 CFRVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSST 300
           CFRVLD SQ+QLG RPPI    A       +  +S G     + L  K     + K SS+
Sbjct: 241 CFRVLDNSQTQLGVRPPILKRPAVSSKFFSAAKSSLGDQNWLKTLQSKHTGSQSVKGSSS 300

Query: 301 TGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVES 360
             K   + S ++R+HPG+LS+ DRA +HYG VTGLK T DGMYLLSAGS SR++LWD+ES
Sbjct: 301 E-KPSVEKSRQKRIHPGMLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIES 360

Query: 361 GCNTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVN 420
           G NTLVN+ET R+ T++ +QL TS D ALVF PCM  +K F MW+G+ +L L GHYE+VN
Sbjct: 361 GRNTLVNFETGRIQTDRAIQLDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVN 420

Query: 421 CCLYSFQDQELYTGGNDRQILVWSP--SRDSTELDWESSADKDNWSD 464
            C ++  DQELYT G DRQI+VWSP  S +      E + DKDNWSD
Sbjct: 421 TCCFNSNDQELYTSGADRQIIVWSPGGSVEDEMAQGEVAEDKDNWSD 450

[Close]
BLAST of Cp4.1LG07g04820 vs. TAIR 10
Match: AT1G27840.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 487.3 bits (1253), Expect = 1.4e-137
Identity = 266/465 (57.20%), Postives = 309/465 (66.45%), Query Frame = 0 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRVSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MW+ I+DRE G++R NSFANR KS R+ SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDTGLFVTG 120
           SGA+D SAAVFD+QRA+  E                                        
Sbjct: 61  SGAADGSAAVFDVQRATDYE---------------------------------------- 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
                           VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SGAF
Sbjct: 121 ---------------AVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAF 180

Query: 181 SHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCF 240
           SHTLSGHR                 GVMSVEWS SSEWVL TGGCDGAIRFWDIRRAGCF
Sbjct: 181 SHTLSGHRD----------------GVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCF 240

Query: 241 RVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGSNMKSRILHKKLANGNATKPSSTTG 300
           RVLDQSQ+QLG RPPI   TA     S    +S G   + + L  K     + K SS + 
Sbjct: 241 RVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSS-SA 300

Query: 301 KLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 360
           K   + S ++R+HPG+LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ESG 
Sbjct: 301 KASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 360

Query: 361 NTLVNYETVRLHTNKPLQLATSQDSALVFAPCMANIKAFDMWTGKASLTLSGHYEAVNCC 420
           NTLVN+ET R+ TNK +QL TS D ALVF PCM  +KAF MW+G+ +L L GHYE+VN C
Sbjct: 361 NTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTC 393

Query: 421 LYSFQDQELYTGGNDRQILVWSP--SRDSTELDWESSADKDNWSD 464
            ++  DQELYT G+DRQILVWSP  + +   +  E + DKDNWSD
Sbjct: 421 CFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDKDNWSD 393

[Close]
BLAST of Cp4.1LG07g04820 vs. TAIR 10
Match: AT5G52820.1 (WD-40 repeat family protein / notchless protein, putative )

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09
Identity = 89/402 (22.14%), Postives = 154/402 (38.31%), Query Frame = 0 

Query: 55  EGRYLLSGASDASAAVFDIQRASHSEGLIAKYQCLFAVDKQHEHGHKYAISSAIWYPIDT 114
           +G+ L SG+ D +  ++D+   +        + C          GHK  + +  W P D 
Sbjct: 120 DGKQLASGSGDTTVRLWDLYTET------PLFTC---------KGHKNWVLTVAWSP-DG 179

Query: 115 GLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMS----SLATSHMLIAAGTEDVQV 174
              V+GS    I  W+    ++  +     K + T +S     L++        ++D   
Sbjct: 180 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 239

Query: 175 RLCDISSGAFSHTLSGHRAIAVRSFNQFVEDVNTYGVMSVEWSASSEWVLITGGCDGAIR 234
           R+ DI+       LSGH                T  V  V+W    + ++ TG  D  I+
Sbjct: 240 RIWDITLKKSIICLSGH----------------TLAVTCVKW--GGDGIIYTGSQDCTIK 299

Query: 235 FWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKLSTSKSHLASQGS-------NMKSRIL 294
            W           + +Q +L R     G   N L+ S  ++   G+          +   
Sbjct: 300 MW-----------ETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPNEEK 359

Query: 295 HKKLANGNATKPSSTTGKLPAKGSTRQRLHPGLLSSQ--DRAVSHYGAVTGLKVTGDGMY 354
            K L   N TK  S    +         L    +S Q   R   H   V  +  + DG +
Sbjct: 360 QKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKW 419

Query: 355 LLSAGSDSRLKLWDVESGCNTLVNYETV-RLHTNKPLQLATSQDSALVFAPCM-ANIKAF 414
           + SA  D  ++LW+  +G      + TV R H     Q++ S DS L+ +    + +K +
Sbjct: 420 IASASFDKSVRLWNGITG-----QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW 471

Query: 415 DMWTGKASLTLSGHYEAVNCCLYSFQDQELYTGGNDRQILVW 442
           ++ T K    L GH + V    +S   +++ +GG DR + +W
Sbjct: 480 EIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g04820 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93ZG32.6e-17366.38WD repeat-containing protein ATCSA-1 OS=Arabidopsis thaliana OX=3702 GN=ATCSA-1 ... [more]
Q5BIM82.1e-6132.05DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN=ERCC8 PE=2 SV=1[more]
Q8CFD56.1e-6132.35DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 GN=Ercc8 PE=1 SV=2[more]
Q132165.1e-6030.91DNA excision repair protein ERCC-8 OS=Homo sapiens OX=9606 GN=ERCC8 PE=1 SV=1[more]
Q9USR01.8e-4128.06DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
BLAST of Cp4.1LG07g04820 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023537496.10.096.33DNA excision repair protein ERCC-8-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022951020.10.095.90DNA excision repair protein ERCC-8-like isoform X2 [Cucurbita moschata][more]
XP_023002628.10.096.12DNA excision repair protein ERCC-8-like isoform X2 [Cucurbita maxima][more]
XP_023537495.13.56e-31496.22DNA excision repair protein ERCC-8-like isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6585706.11.47e-31396.00WD repeat-containing protein ATCSA-1, partial [Cucurbita argyrosperma subsp. sor... [more]
BLAST of Cp4.1LG07g04820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GHF80.095.90DNA excision repair protein ERCC-8-like isoform X2 OS=Cucurbita moschata OX=3662... [more]
A0A6J1KU480.096.12DNA excision repair protein ERCC-8-like isoform X2 OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1GHI54.13e-31395.78DNA excision repair protein ERCC-8-like isoform X1 OS=Cucurbita moschata OX=3662... [more]
A0A6J1KK171.23e-31296.01DNA excision repair protein ERCC-8-like isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
A0A1S3BA401.41e-30690.71DNA excision repair protein ERCC-8-like isoform X4 OS=Cucumis melo OX=3656 GN=LO... [more]
BLAST of Cp4.1LG07g04820 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G27840.11.9e-17466.38Transducin/WD40 repeat-like superfamily protein [more]
AT1G27840.34.6e-17366.24Transducin/WD40 repeat-like superfamily protein [more]
AT1G19750.12.2e-16764.03Transducin/WD40 repeat-like superfamily protein [more]
AT1G27840.21.4e-13757.20Transducin/WD40 repeat-like superfamily protein [more]
AT5G52820.11.5e-0922.14WD-40 repeat family protein / notchless protein, putative [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 342..356
score: 36.29
coord: 220..234
score: 33.41
coord: 117..131
score: 34.14
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 317..355
e-value: 5.7E-4
score: 29.2
coord: 177..233
e-value: 0.0014
score: 27.9
coord: 85..130
e-value: 0.0019
score: 27.5
coord: 32..72
e-value: 0.9
score: 17.3
coord: 403..442
e-value: 2.1E-5
score: 34.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 181..233
e-value: 1.4E-4
score: 22.6
coord: 407..442
e-value: 0.003
score: 18.4
coord: 325..355
e-value: 0.005
score: 17.7
coord: 98..130
e-value: 0.034
score: 15.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 410..442
score: 10.408196
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 200..242
score: 9.472486
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 323..364
score: 13.181907
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 97..139
score: 11.07656
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 315..451
e-value: 2.7E-20
score: 74.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..313
e-value: 2.2E-62
score: 213.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..312
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 410..442
score: 8.755605
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 323..359
score: 10.838322
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 97..133
score: 8.57106
IPR042238DNA excision repair protein Rad28/ERCC8/Ckn1/ATCSA-1PANTHERPTHR46202DNA EXCISION REPAIR PROTEIN ERCC-8coord: 1..463
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 220..234
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 342..356
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 38..442

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g04820.1Cp4.1LG07g04820.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006283 transcription-coupled nucleotide-excision repair
cellular_component GO:0031464 Cul4A-RING E3 ubiquitin ligase complex
cellular_component GO:0000109 nucleotide-excision repair complex
molecular_function GO:0005515 protein binding