Cp4.1LG07g04740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g04740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG07: 3508030 .. 3509883 (+)
RNA-Seq Expression	Cp4.1LG07g04740
Synteny	Cp4.1LG07g04740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAATGCTGCCCTTGAGCCAGGCTCCGGCCGGTGTCGAACCGGCGACCAAGTTTTCCCTTACCACTCTTCCCTCTCTCAAATTCTCAAACCCTAATCCTTTTCGACGCTCTAAATTTATTCCCAGAAGGAATGCTGCGAAGCCGCTTATCATAGCCCTCTCAAAAGCGGAAGGAGCCGTCGATTCGACGAAACAGGCTCTTTCCAACTCTCCAAGTCTGCCTTCTTCTCCCTCCGACCAGACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGCGTCATTCAGTTTGATAAGCCCGATAGGTCTTCTCGATGGAGAAAATGGAGGTAATTTGGGCGTTTTTATGATTTTTTTTCTTGTTTCATCTGTGAATTTAGTATATTGTTCTGTGGTTCTGTGATTCTTCAGCCATGTGGCTCTGCTTGCTGGTGGAGATGTATTGGCTTTGCTTTTGTTCTCCTCAATAGGAAGATTTAGCCATGGTTTCCCTGTTTTTGATTTCGAGACTTTGCGCACGGCGGATCCTTTTATTGCTGGTATGTTTTTATCTGCGCCATAATTTGTAGTTGAATGTTTGTTGGTGGTTCTCTTTTGCTGGATGAATCATTGAAAGTGGATTGTTATAGGTTGGTTTCTGAGTGCTTACTTTCTCGGAGGTTATGGAGAGGATGGGCGTGGTTTAAATGGTTATTCCAAGGCTGTTTTTGCAGCTTCTAAATCATGGGCTTTGGGAATTCCTGTAAGTTTATGGCCTTCTTGTGTTTGTCCTTCAGTGCTTCTTAGTTTTGATATCATTTGATCCTGAAAAGTAATGGTTTCCTCCGTTGAACTAAGACTGCGATCACGAAAGAATTCTTGTTTTACTAGTTATGATATCATTTGATATTAGGTATCACGGTTGTAATTGTCCAAGGCGTGTTGTTCATGGCCGCGTGCTCATTACGTGCCAGAACCCTTGCCTTGTATCACTTTATCGCTTTCTTTTACTGCTTTCATGATGTATAACTTCCTTCTAGTCTTTTCTAAGCGTATGACGTTTCGGCAGAATTATGTCTACGCTTGGTAGACATGAAATGCCCCAGAATGTATTCTAGGGGGATGTGACTAGTCGCCGACTCCTCCCATCTAGATTTTGTATGACCGTTTGGCAAAATCACGTCTAGGCCTGCCAAACTTGAATCGCCTCAAAATGTACTATAGGTGATGCAACTAGTGTCAAATTCTCCTTACCCGAAAAGTTATATGTTATTTAAGCCGTTGTGTTGCCTTTTGCTTGTAGTCATATAACATTGTTTTCCACCTTTCTCTCAATCTTGCTTTCAAACTCTATCAAAATCTCTCAGCCCCGTTTTCTAAAACCTTCTTCTCAAAATGGGACCAGAGTCTAGAGCATACGTTGTCCGGTTGTAGGCAACGCGGTCCTAAATTGGTTTGACTCACTTAGGCTGAGAATGAGTGCCATACAATCGCCAAATTCGCTACTAAGGAAAGTGCGACCGTGACACCGGGCATCCCTTGTTGAGATGATTTATTCTTAACTCATTATAGATAACAGTATCAAGATGATTGTATCTTGACCATCTTATGGATTCTGAAGTTTATGACGTTATATATTGTTCTTTAATCTTTTACTGTACAAAAAGATCACTTTTCTTTGTCTTTTGCAGCTTGGTCTAATAATAAGAGCTGCAACGTCTGGCCATATTCCACCATATAATTTCATAGGGGTAACAATGGGAAGCACGGCTGTCTTGCTCGTTGGATGGAGAGCGATACGATATAAAGTTTTTCCAGTCGATAATGGGAAGAAGAATGATGTATATCGTCGTGGCAACCCATTTGAGCTATTT

mRNA sequence

GATAATGCTGCCCTTGAGCCAGGCTCCGGCCGGTGTCGAACCGGCGACCAAGTTTTCCCTTACCACTCTTCCCTCTCTCAAATTCTCAAACCCTAATCCTTTTCGACGCTCTAAATTTATTCCCAGAAGGAATGCTGCGAAGCCGCTTATCATAGCCCTCTCAAAAGCGGAAGGAGCCGTCGATTCGACGAAACAGGCTCTTTCCAACTCTCCAAGTCTGCCTTCTTCTCCCTCCGACCAGACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGCGTCATTCAGTTTGATAAGCCCGATAGGTCTTCTCGATGGAGAAAATGGAGCCATGTGGCTCTGCTTGCTGGTGGAGATGTATTGGCTTTGCTTTTGTTCTCCTCAATAGGAAGATTTAGCCATGGTTTCCCTGTTTTTGATTTCGAGACTTTGCGCACGGCGGATCCTTTTATTGCTGGTTGGTTTCTGAGTGCTTACTTTCTCGGAGGTTATGGAGAGGATGGGCGTGGTTTAAATGGTTATTCCAAGGCTGTTTTTGCAGCTTCTAAATCATGGGCTTTGGGAATTCCTCTTGGTCTAATAATAAGAGCTGCAACGTCTGGCCATATTCCACCATATAATTTCATAGGGGTAACAATGGGAAGCACGGCTGTCTTGCTCGTTGGATGGAGAGCGATACGATATAAAGTTTTTCCAGTCGATAATGGGAAGAAGAATGATGTATATCGTCGTGGCAACCCATTTGAGCTATTT

Coding sequence (CDS)

ATGCTGCCCTTGAGCCAGGCTCCGGCCGGTGTCGAACCGGCGACCAAGTTTTCCCTTACCACTCTTCCCTCTCTCAAATTCTCAAACCCTAATCCTTTTCGACGCTCTAAATTTATTCCCAGAAGGAATGCTGCGAAGCCGCTTATCATAGCCCTCTCAAAAGCGGAAGGAGCCGTCGATTCGACGAAACAGGCTCTTTCCAACTCTCCAAGTCTGCCTTCTTCTCCCTCCGACCAGACGGTTTTCGTCGGCGATGAGAGTGTTCCGTTGGAAGGCGTCATTCAGTTTGATAAGCCCGATAGGTCTTCTCGATGGAGAAAATGGAGCCATGTGGCTCTGCTTGCTGGTGGAGATGTATTGGCTTTGCTTTTGTTCTCCTCAATAGGAAGATTTAGCCATGGTTTCCCTGTTTTTGATTTCGAGACTTTGCGCACGGCGGATCCTTTTATTGCTGGTTGGTTTCTGAGTGCTTACTTTCTCGGAGGTTATGGAGAGGATGGGCGTGGTTTAAATGGTTATTCCAAGGCTGTTTTTGCAGCTTCTAAATCATGGGCTTTGGGAATTCCTCTTGGTCTAATAATAAGAGCTGCAACGTCTGGCCATATTCCACCATATAATTTCATAGGGGTAACAATGGGAAGCACGGCTGTCTTGCTCGTTGGATGGAGAGCGATACGATATAAAGTTTTTCCAGTCGATAATGGGAAGAAGAATGATGTATATCGTCGTGGCAACCCATTTGAGCTATTT

Protein sequence

MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVDSTKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVLALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAASKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDVYRRGNPFELF

Homology

[Close]

BLAST of Cp4.1LG07g04740 vs. NCBI nr
Match: XP_023521037.1 (uncharacterized protein LOC111784627 [Cucurbita pepo subsp. pepo] >XP_023537100.1 uncharacterized protein LOC111798280 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500 bits (1288), Expect = 1.99e-178
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. NCBI nr
Match: XP_023002605.1 (uncharacterized protein LOC111496414 [Cucurbita maxima])

HSP 1 Score: 494 bits (1273), Expect = 3.84e-176
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLP SQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPFSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKV PV+NGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVLPVNNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. NCBI nr
Match: XP_022951109.1 (uncharacterized protein LOC111454055 isoform X1 [Cucurbita moschata])

HSP 1 Score: 493 bits (1270), Expect = 1.10e-175
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPL QAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPLRQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSH ALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHAALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPP NFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPNNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. NCBI nr
Match: XP_022951110.1 (uncharacterized protein LOC111454055 isoform X2 [Cucurbita moschata])

HSP 1 Score: 493 bits (1270), Expect = 1.10e-175
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPL QAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPLRQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSH ALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHAALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPP NFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPNNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. NCBI nr
Match: KAG7020620.1 (hypothetical protein SDJN02_17306 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 494 bits (1272), Expect = 2.53e-175
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPL QAPAGVEPATKFSLTTLPSLKFSNPNPFRRSK IPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPLRQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKLIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPPY+FIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPYHFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. ExPASy TrEMBL
Match: A0A6J1KPE7 (uncharacterized protein LOC111496414 OS=Cucurbita maxima OX=3661 GN=LOC111496414 PE=4 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 1.86e-176
Identity = 247/250 (98.80%), Postives = 248/250 (99.20%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLP SQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPFSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKV PV+NGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVLPVNNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. ExPASy TrEMBL
Match: A0A6J1GHS3 (uncharacterized protein LOC111454055 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454055 PE=4 SV=1)

HSP 1 Score: 493 bits (1270), Expect = 5.34e-176
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPL QAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPLRQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSH ALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHAALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPP NFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPNNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. ExPASy TrEMBL
Match: A0A6J1GHR5 (uncharacterized protein LOC111454055 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454055 PE=4 SV=1)

HSP 1 Score: 493 bits (1270), Expect = 5.34e-176
Identity = 247/250 (98.80%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPL QAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD
Sbjct: 1   MLPLRQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSH ALLAGGDVL
Sbjct: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHAALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA
Sbjct: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGLIIRAATSGHIPP NFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV
Sbjct: 181 SKSWALGIPLGLIIRAATSGHIPPNNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. ExPASy TrEMBL
Match: A0A6J1HFL9 (uncharacterized protein LOC111463015 OS=Cucurbita moschata OX=3662 GN=LOC111463015 PE=4 SV=1)

HSP 1 Score: 444 bits (1141), Expect = 2.45e-156
Identity = 220/250 (88.00%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPLSQAPAGV PA KFSLTTLPSLKFSNPNPFRRSKFIPRRN AKPL I LSKAEG VD
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPAKPLNITLSKAEGTVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQA+SNSPS P  P+DQTVFVGDESVPLEGVIQFDKP+ SSR  KW  VALLAGGDVL
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIQFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRF+HGFPVFDFET+RTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAV AA
Sbjct: 121 ALLLFSSIGRFTHGFPVFDFETVRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGL++R ATSGH+PPYNFIGVTMGSTAVLL+GWRAI YKVFPV+N KK+DV
Sbjct: 181 SKSWALGIPLGLLVRVATSGHLPPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. ExPASy TrEMBL
Match: A0A6J1K997 (uncharacterized protein LOC111492268 OS=Cucurbita maxima OX=3661 GN=LOC111492268 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 3.33e-154
Identity = 218/250 (87.20%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MLPLSQAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKPLIIALSKAEGAVD 60
           MLPLSQAPAGV PA KFSLTTLPSLKFSNPNPFRRSKFIPRRN +KPL I LSKAEG VD
Sbjct: 1   MLPLSQAPAGVLPARKFSLTTLPSLKFSNPNPFRRSKFIPRRNPSKPLNITLSKAEGTVD 60

Query: 61  STKQALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPDRSSRWRKWSHVALLAGGDVL 120
           STKQA+SNSPS P  P+DQTVFVGDESVPLEGVI+FDKP+ SSR  KW  VALLAGGDVL
Sbjct: 61  STKQAVSNSPSPPPFPTDQTVFVGDESVPLEGVIRFDKPNTSSRLSKWGRVALLAGGDVL 120

Query: 121 ALLLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAA 180
           ALLLFSSIGRF+HGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRG+NGYSKAV AA
Sbjct: 121 ALLLFSSIGRFTHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGMNGYSKAVIAA 180

Query: 181 SKSWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDV 240
           SKSWALGIPLGL++R ATSGH+ PYNFIGVTMGSTAVLL+GWRAI YKVFPV+N KK+DV
Sbjct: 181 SKSWALGIPLGLLVRVATSGHLLPYNFIGVTMGSTAVLLIGWRAILYKVFPVNNSKKSDV 240

Query: 241 YRRGNPFELF 250
           YRRGNPFELF
Sbjct: 241 YRRGNPFELF 250

[Close]

BLAST of Cp4.1LG07g04740 vs. TAIR 10
Match: AT1G44920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 276.2 bits (705), Expect = 2.6e-74
Identity = 145/248 (58.47%), Postives = 183/248 (73.79%), Query Frame = 0


Query: 6   QAPAGVEPATKFSLTTLPSLKFSNPNPFRRSKFIPRRNAAKP-LIIALSKAEGAVDSTKQ 65
           + P G   A +F   + PS  FS+P+ +      P  + ++P +++ALS  +G+V+S   
Sbjct: 7   RTPTGPVSAVRFITKSKPS-PFSSPDSWLLP--APNTHRSRPRVVLALSNPDGSVNSKP- 66

Query: 66  ALSNSPSLPSSPSDQTVFVGDESVPLEGVIQFDKPD--RSSRWRKWSHVALLAGGDVLAL 125
             S S S   S  D+TVFVG ++VPLEGVIQFDKP    SS   KW  VALLAGGDVLAL
Sbjct: 67  --STSASQIPSSGDETVFVGQDNVPLEGVIQFDKPSSTSSSNITKWGRVALLAGGDVLAL 126

Query: 126 LLFSSIGRFSHGFPVFDFETLRTADPFIAGWFLSAYFLGGYGEDGRGLNGYSKAVFAASK 185
           L+FS+IGRFSHGFPVF  +TL TADPFIAGWFLSAYFLGGY E+GRG+ G SKAV AA+K
Sbjct: 127 LIFSAIGRFSHGFPVFSLDTLHTADPFIAGWFLSAYFLGGYAEEGRGMKGKSKAVVAAAK 186

Query: 186 SWALGIPLGLIIRAATSGHIPPYNFIGVTMGSTAVLLVGWRAIRYKVFPVDNGKKNDVYR 245
           SW +G PLG+IIR+A+SGHIP Y+F+ VTMGSTAVLL+GWRA+ + V P ++ KK+D YR
Sbjct: 187 SWIVGTPLGIIIRSASSGHIPAYSFVLVTMGSTAVLLIGWRALLFSVLPTESKKKDDTYR 246

Query: 246 RGNPFELF 251
           +G+ FELF
Sbjct: 247 KGSAFELF 248

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g04740 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g04740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023521037.1	1.99e-178	100.00	uncharacterized protein LOC111784627 [Cucurbita pepo subsp. pepo] >XP_023537100....	[more]
XP_023002605.1	3.84e-176	98.80	uncharacterized protein LOC111496414 [Cucurbita maxima]	[more]
XP_022951109.1	1.10e-175	98.80	uncharacterized protein LOC111454055 isoform X1 [Cucurbita moschata]	[more]
XP_022951110.1	1.10e-175	98.80	uncharacterized protein LOC111454055 isoform X2 [Cucurbita moschata]	[more]
KAG7020620.1	2.53e-175	98.80	hypothetical protein SDJN02_17306 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG07g04740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KPE7	1.86e-176	98.80	uncharacterized protein LOC111496414 OS=Cucurbita maxima OX=3661 GN=LOC111496414...	[more]
A0A6J1GHS3	5.34e-176	98.80	uncharacterized protein LOC111454055 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GHR5	5.34e-176	98.80	uncharacterized protein LOC111454055 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HFL9	2.45e-156	88.00	uncharacterized protein LOC111463015 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A6J1K997	3.33e-154	87.20	uncharacterized protein LOC111492268 OS=Cucurbita maxima OX=3661 GN=LOC111492268...	[more]

BLAST of Cp4.1LG07g04740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G44920.1	2.6e-74	58.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021414	Protein of unknown function DUF3054	PFAM	PF11255	DUF3054	coord: 116..225 e-value: 1.6E-24 score: 86.6
None	No IPR available	PANTHER	PTHR35283	T12C22.21 PROTEIN	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g04740.1	Cp4.1LG07g04740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane