Cp4.1LG07g04620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g04620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Thioredoxin domain-containing protein
Location	Cp4.1LG07: 2932415 .. 2936892 (-)
RNA-Seq Expression	Cp4.1LG07g04620
Synteny	Cp4.1LG07g04620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTTCGACACCCAAACAGCCTCTCTTTTGCTTCAAATGGCCATGGGACATGAACCCTAAAAATCCTTCTGACTGTTCATTTGAGGGTCCTTGGCTGTTCAAATCACTGCAAAATGTGGGTGTCTTTGCTTCCAATTTCTTAAACGAAGTTTCAAAGTCATCACCTCCATGGGTCAATGCTTTTAAGCCATTGTCGTTTGATGGAAATAAGATGTCCAAGTCTAGAAAAAAGCTAAGTCCTGAAGAGCAAGGAGAGGCAGAAAACAGGGCATTTGCAGCAGCGTTAGCCAGTGGGAAAGAAGCCACCGTCATTGAGTTCTACTCGCCCAAATGTCCGCTGTGCAGTTCCTTGCTTGGTTTTGTTACGCAGATGGAGGCAAGGAATGCACAATGGCTTAACATTGTGATGGCTGATGCAGAGAATGATAAATGGCTGCCTGAGGTGCTCAACTTTCCTCTTACAACATCATAATTTAGTAGCTTAATATATGGTAAAGTCCTCTCCCTAGCAGACCCGTTTTAAAACCTTGAGGGGAAGTTCGAAAGAGAAAGTTTAAAGAGGACAATATTTGCAAGCGGTGAGTTTGGGCTCTTACAAATGGTACAAGAGTCAGACATTGGGCGGTGTGCTAGTGAGGATGTTGGGACCCCAGGAGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGGTAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTCCCTAGCAGATGCATTTTAAAACTTGAGGAAAGCTCGAAAGGAAAAGTCTAAAGAGGACAATATATGCTAGCAATGAGTTTGATTGTTACAAATGGTATCAAAGCCAGACATCGGGTGGTGTGCCATCAAGGACGTTGGGACCCCAAGAGGGGTGGATTGTGAGATCCCACATCGATTAGAGAGGGGAACAAAACATTCTTTATAAGGGCGTGGAAACCTTTCCCTAGCAGACGTGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATCAAAGGCAAACATCGGGCGGTTTGCCATCGAGGACGTTGGGCCCCGAAGGGGGTGGAATGTGAGATCCCACATCGGTTGGAGAGAGGAACGAAACATTCCTTATAAGGGTGTGGAAGCCTCTCCTTAGTAGACACGTTTTAAAACCTTGAGGGAAAGCTCGAAAGGAAAAATTCAAAGGCCCAAAGATGACAATATCTGCTAGCGGTGAGTTTGTGTTGTTACAAATTTGTTAATCCCCTTGCTACATTTTCATTAATAACTTGATGATTGCCCGAAGATCACTCTTCAAATTCTTTTCGTGTTTCTACGAAATCGCCCTGCGTGTTCAAACCTTACCCAGAATCGTTCGTGTTGATCTCACTTCCATAGTTCTGTGGATATTTATCTTGTAAAGGGATCATATGAACTGAAATATGTGGTGTGTTTGATTGAATGGGTGGTTTGTGTTAGCATTGTTGGTAATGTTCTTGCTTACATGTTTATGCAGCTTCTTCATTATGATATTAGTTATGTTCCTTGCTTCGTGATTTTGGACAAACAAGGCAAGGCGCTAGCAAAGACGGGTATTCCAAGCAGTCGGCTTCATGTTATTGCAGGACTTTCTCATCTTCTCAAACTGAAGCGCCCGACAACACTCCCTGGATCAGATAATAAGCAGCAGCCACCATGTTGAAACACAGACATTTGGAACAAACGGGTATGAAATGGATTTTAATTTAAGCTTTTGTTTGAATTGTGTTGTGTTTAATAATATATGTATAAACCATGAAGCTAGAATTAATTAAATTAATTAATTTATGAAATGGATTTTCATCTTTTGTTTTTGATCTTAGAAATTGAACCTCTCTAATTGTGTAATGACAAGAGGAGTCGTTACTTAGGATATCAGAATGGTACCTCTCCTTAATAAGATTTGGTTCGGGACGAACTAAGGTAGGAACAGGTAGACATATGACATTTGAGTAAAGGAGGGTATAAGAATGAATCGAAACCACATCTGAATGAGAGATCATGAGAATAGAGTGACCAAGAAATGCTTAAAAGAATTGAAAGTCATGTGGGTGAACAAAGTGCATATTTCTTTACATTGGCTCAATCACAATCACAAGAGCAATTATATGTTGAGTATATGAACAAAGTGCATTTTCCTTTACATTGGCTCAATCACAAAAGCAATTAGATGTCGGGTGGCCTCTTAAGAATTTTTTTAGGATGCATGTGAGTGAAGATAAAATATGTTAGAACGACTCTTGTTTGTCTGTAGAAATAGTCGTAATAGTCTTCACCACTCTTGAGAAGCAAAGAATAGGTAACATGATCATGTTGCAGGAGAATGTCGGAACTATTAGGTGTCAAATCTGAATTTCAAATCTTAAATACGGGTCGTCACAAGTTGATTCGATCTAGCCATGAAAAGGTGACTCATTCTACCGACGAAGTCTCTAATTGAATGATAGGGAAATTGAATGGCGAGAGAGATGGCTGAAAGGAAGCAAAGGAAGATGGTGAATGTTTGAATCTCCAGCAGCATTAATTCATGTTGACTGAATAACAGCTAACAGTTACTTGTGATTATCGCATTCAATGTGCTCGCTGCCAACATTGCCTGTCCTCATCTGCCCTCTAAAGGAATGCTTCCATTTTTAACTAAACTCTCATTTAAACTTTTAAGTTAATAATATATGTATTATCTAGTTCATTAGTGTAATAACACTAATTCGAGAGCCGATTAGGCACATTAACTTGATCACTCTTTTTTCGAGTACTTTTTATTTATTTGAATTATAGAAAATCTATCGAGCTCAAGGAACTAAAATAAAACATAACGAATGATAACGGTGACTTTTCTATTCTCAAGGAACCCTAAATGAATAAAGTCAAATACCTTAAAACTCAAGGAACCCTAAATGAATAAAGTCAAATACCTTAAAAGTAATTTTCGAGATTATTACTTTAATTTAAATAAAATGGAAAGAGGTTAAAAAAGTAAATTGACTTGTATAGAAAAGGGTCTCGGTTGAAATTTTTAGTGTAACACGTTAGAAATAGACTCTTCATGTATGATATTATCTACTTTGAGCTTAAACTCTCGTGATTTTGCTTTAAACTTCTCCAAAAGATCTCGTACGAATGAAGATGTATTTCTTTATTTATAAACTCAGGATCATTTTCTAAATTACTCAATCTCGACTCACTCCCAACACTCTAACCTAAAAAAGAAAAAAAAAATTGATCCCTAAAAAAGAAAAAAAAAATTGATGAGATAATTTTCTATAAAATCATATTAAAATTAAAAATTAAAAATGCCAGCTGGATCGAGCAAAGCAAAATGAAATGGCGATAGAATTTAGAGTTTGAACAAACAATCATTCCAATTTAAAAAAAAAAAAAGAACACAGAAATTTTGGGTTATCTTCATAATCAAGCGTTGGGAGGTGGATTTTGAGAAGCTGGTTCATCTTGCTGGGTTTGGACCGACATTGTCGCCGCCGGAAGAGAACCAGCGGCGGTGGAGACATTAACCCTCGGCGACGGCGAGCTAACCCTTCCATCAATACAAGACGAGCATTTGACCTCCGCCCATCTCTCCAAGTCGAAATGGCCGTAACCCATTATACTCCTCCCCGAGCACAGCCGCCCCACAACGACGGCGACCACCGCGAACACAATGATGACGACGAGCACTCCAATGACAGGACCAACAGAGCCGCCGTAAGGTTGCTGCATTCCGGGCGCCGGCGGAGATTGTTGGTCAATTGGGAGTGACATTAGAGAGGTGAAGAAAACAGAGTCACTCTCCAATGGCGAAAAAGATGCGTGGTTTACTTACGATGGAAATTAAAAGAACCCAGAGAGAGAAGAAAAGAAAGGAAAAAGGGGAGAAAAGATGGAATCTTTGGGAGTGTTAAAAAGTCCAATCTCTTTCCCAGATTGTGCCTTTTTTTGTGTGTTTGAAGAGTAATAAACAAACAAATATGTCAAATGACCCAAATGAGCAATTTACAGAGCTTAGAATCTACAGACTTTACAAAACTTCAAAAAAAAAGTCACTGTAATTTAAGCAGAGGAAAGATAAACAAAGACAACAACAAGTGCAGCAGAGCATAATTTTATGGGTATCTGTTTCATGGTAGCATTGGCTGAAATGGCTCAGTACGGTCTCACGTGAAGCCTCTGGCATATGATTGAACATATTTCTAATCTTTCTCTTCAAGCTCATAAGATTTGATCTTCCATGTTCTTGAGGTTTTTTCTGATGGGTTGAGCTTGAAATGGTGTTTAATCTTCTCTGAAGGGAGAAATTGAAGTCTACTGAGATGTAATGAACGAGCCAGCGCTGTGAGTTTCATTGTAGCGATCGAGCGATCGAGCCGGCGCAAATGCGACCTAACTATATACAGATCCAAATCTAATCCTGCTTAT

mRNA sequence

ATGCGTTCGACACCCAAACAGCCTCTCTTTTGCTTCAAATGGCCATGGGACATGAACCCTAAAAATCCTTCTGACTGTTCATTTGAGGGTCCTTGGCTGTTCAAATCACTGCAAAATGTGGGTGTCTTTGCTTCCAATTTCTTAAACGAAGTTTCAAAGTCATCACCTCCATGGGTCAATGCTTTTAAGCCATTGTCGTTTGATGGAAATAAGATGTCCAAGTCTAGAAAAAAGCTAAGTCCTGAAGAGCAAGGAGAGGCAGAAAACAGGGCATTTGCAGCAGCGTTAGCCAGTGGGAAAGAAGCCACCGTCATTGAGTTCTACTCGCCCAAATGTCCGCTGTGCAGTTCCTTGCTTGGTTTTGTTACGCAGATGGAGGCAAGGAATGCACAATGGCTTAACATTCTTCTTCATTATGATATTAGTTATGTTCCTTGCTTCGTGATTTTGGACAAACAAGGCAAGGCGCTAGCAAAGACGGGTATTCCAAGCAGTCGGCTTCATGTTATTGCAGGACTTTCTCATCTTCTCAAACTGAAGCGCCCGACAACACTCCCTGGATCAGATAATAAGCAGCAGCCACCATGTTGAAACACAGACATTTGGAACAAACGGGAGAATGTCGGAACTATTAGGTGTCAAATCTGAATTTCAAATCTTAAATACGGGTCGTCACAAGTTGATTCGATCTAGCCATGAAAAGGTGACTCATTCTACCGACGAAGTCTCTAATTGAATGATAGGGAAATTGAATGGCGAGAGAGATGGCTGAAAGGAAGCAAAGGAAGATGGTGAATGTTTGAATCTCCAGCAGCATTAATTCATGTTGACTGAATAACAGCTAACAGTTACTTGTGATTATCGCATTCAATGTGCTCGCTGCCAACATTGCCTGTCCTCATCTGCCCTCTAAAGGAATGCTTCCATTTTTAACTAAACTCTCATTTAAACTTTTAAGTTAATAATATATGTATTATCTAGTTCATTAGTGTAATAACACTAATTCGAGAGCCGATTAGGCACATTAACTTGATCACTCTTTTTTCGAGTACTTTTTATTTATTTGAATTATAGAAAATCTATCGAGCTCAAGGAACTAAAATAAAACATAACGAATGATAACGGTGACTTTTCTATTCTCAAGGAACCCTAAATGAATAAAGTCAAATACCTTAAAACTCAAGGAACCCTAAATGAATAAAGTCAAATACCTTAAAAGTAATTTTCGAGATTATTACTTTAATTTAAATAAAATGGAAAGAGGTTAAAAAAGTAAATTGACTTGTATAGAAAAGGGTCTCGGTTGAAATTTTTAGTGTAACACGTTAGAAATAGACTCTTCATGTATGATATTATCTACTTTGAGCTTAAACTCTCGTGATTTTGCTTTAAACTTCTCCAAAAGATCTCGTACGAATGAAGATGTATTTCTTTATTTATAAACTCAGGATCATTTTCTAAATTACTCAATCTCGACTCACTCCCAACACTCTAACCTAAAAAAGAAAAAAAAAATTGATCCCTAAAAAAGAAAAAAAAAATTGATGAGATAATTTTCTATAAAATCATATTAAAATTAAAAATTAAAAATGCCAGCTGGATCGAGCAAAGCAAAATGAAATGGCGATAGAATTTAGAGTTTGAACAAACAATCATTCCAATTTAAAAAAAAAAAAAGAACACAGAAATTTTGGGTTATCTTCATAATCAAGCGTTGGGAGGTGGATTTTGAGAAGCTGGTTCATCTTGCTGGGTTTGGACCGACATTGTCGCCGCCGGAAGAGAACCAGCGGCGGTGGAGACATTAACCCTCGGCGACGGCGAGCTAACCCTTCCATCAATACAAGACGAGCATTTGACCTCCGCCCATCTCTCCAAGTCGAAATGGCCGTAACCCATTATACTCCTCCCCGAGCACAGCCGCCCCACAACGACGGCGACCACCGCGAACACAATGATGACGACGAGCACTCCAATGACAGGACCAACAGAGCCGCCGTAAGGTTGCTGCATTCCGGGCGCCGGCGGAGATTGTTGGTCAATTGGGAGTGACATTAGAGAGGTGAAGAAAACAGAGTCACTCTCCAATGGCGAAAAAGATGCGTGGTTTACTTACGATGGAAATTAAAAGAACCCAGAGAGAGAAGAAAAGAAAGGAAAAAGGGGAGAAAAGATGGAATCTTTGGGAGTGTTAAAAAGTCCAATCTCTTTCCCAGATTGTGCCTTTTTTTGTGTGTTTGAAGAGTAATAAACAAACAAATATGTCAAATGACCCAAATGAGCAATTTACAGAGCTTAGAATCTACAGACTTTACAAAACTTCAAAAAAAAAGTCACTGTAATTTAAGCAGAGGAAAGATAAACAAAGACAACAACAAGTGCAGCAGAGCATAATTTTATGGGTATCTGTTTCATGGTAGCATTGGCTGAAATGGCTCAGTACGGTCTCACGTGAAGCCTCTGGCATATGATTGAACATATTTCTAATCTTTCTCTTCAAGCTCATAAGATTTGATCTTCCATGTTCTTGAGGTTTTTTCTGATGGGTTGAGCTTGAAATGGTGTTTAATCTTCTCTGAAGGGAGAAATTGAAGTCTACTGAGATGTAATGAACGAGCCAGCGCTGTGAGTTTCATTGTAGCGATCGAGCGATCGAGCCGGCGCAAATGCGACCTAACTATATACAGATCCAAATCTAATCCTGCTTAT

Coding sequence (CDS)

ATGCGTTCGACACCCAAACAGCCTCTCTTTTGCTTCAAATGGCCATGGGACATGAACCCTAAAAATCCTTCTGACTGTTCATTTGAGGGTCCTTGGCTGTTCAAATCACTGCAAAATGTGGGTGTCTTTGCTTCCAATTTCTTAAACGAAGTTTCAAAGTCATCACCTCCATGGGTCAATGCTTTTAAGCCATTGTCGTTTGATGGAAATAAGATGTCCAAGTCTAGAAAAAAGCTAAGTCCTGAAGAGCAAGGAGAGGCAGAAAACAGGGCATTTGCAGCAGCGTTAGCCAGTGGGAAAGAAGCCACCGTCATTGAGTTCTACTCGCCCAAATGTCCGCTGTGCAGTTCCTTGCTTGGTTTTGTTACGCAGATGGAGGCAAGGAATGCACAATGGCTTAACATTCTTCTTCATTATGATATTAGTTATGTTCCTTGCTTCGTGATTTTGGACAAACAAGGCAAGGCGCTAGCAAAGACGGGTATTCCAAGCAGTCGGCTTCATGTTATTGCAGGACTTTCTCATCTTCTCAAACTGAAGCGCCCGACAACACTCCCTGGATCAGATAATAAGCAGCAGCCACCATGTTGA

Protein sequence

MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVNAFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLGFVTQMEARNAQWLNILLHYDISYVPCFVILDKQGKALAKTGIPSSRLHVIAGLSHLLKLKRPTTLPGSDNKQQPPC

Homology

[Close]

BLAST of Cp4.1LG07g04620 vs. NCBI nr
Match: XP_023537358.1 (uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo] >XP_023537359.1 uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo] >XP_023537360.1 uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 400 bits (1027), Expect = 2.15e-140
Identity = 196/209 (93.78%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN
Sbjct: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60

Query: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120
           AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG
Sbjct: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120

Query: 121 FVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180
           FVTQMEARNAQWLNI             LLHYDISYVPCFVILDKQGKALAKTGIPSSRL
Sbjct: 121 FVTQMEARNAQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180

Query: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 196
           HVIAGLSHLLKLKRPTTLPGSDNKQQPPC
Sbjct: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 209

[Close]

BLAST of Cp4.1LG07g04620 vs. NCBI nr
Match: XP_023002017.1 (uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002018.1 uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002019.1 uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002020.1 uncharacterized protein LOC111496027 [Cucurbita maxima])

HSP 1 Score: 393 bits (1009), Expect = 1.20e-137
Identity = 191/209 (91.39%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           MRSTPKQPLFCFKWPWD+NPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN
Sbjct: 1   MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60

Query: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120
           AFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALA GKEATVIEFYSPKCPLCSSLLG
Sbjct: 61  AFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCSSLLG 120

Query: 121 FVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180
           FVTQMEARN+QWLNI             +LHYDISYVPCFVILDKQGKALAKTGIPSSRL
Sbjct: 121 FVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRL 180

Query: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 196
           HVIAGLSHLLKLKRPTTLPGSDNKQQPPC
Sbjct: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 209

[Close]

BLAST of Cp4.1LG07g04620 vs. NCBI nr
Match: KAG6585642.1 (hypothetical protein SDJN03_18375, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 394 bits (1012), Expect = 2.31e-137
Identity = 192/209 (91.87%), Postives = 196/209 (93.78%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           MRSTPKQPLFCFKWPWD+NPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN
Sbjct: 49  MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 108

Query: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120
           AFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG
Sbjct: 109 AFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 168

Query: 121 FVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180
           FVTQMEARN+QWLNI             LLHYDISYVPCFVILDKQGKALAKTGIPSSRL
Sbjct: 169 FVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRL 228

Query: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 196
           HVIAGLSHLLKLKRPTTLPGSDN+QQPPC
Sbjct: 229 HVIAGLSHLLKLKRPTTLPGSDNQQQPPC 257

[Close]

BLAST of Cp4.1LG07g04620 vs. NCBI nr
Match: XP_022951826.1 (uncharacterized protein LOC111454558 [Cucurbita moschata] >XP_022951827.1 uncharacterized protein LOC111454558 [Cucurbita moschata] >XP_022951828.1 uncharacterized protein LOC111454558 [Cucurbita moschata] >XP_022951829.1 uncharacterized protein LOC111454558 [Cucurbita moschata])

HSP 1 Score: 388 bits (997), Expect = 8.08e-136
Identity = 191/209 (91.39%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           MRSTPKQPLFCFKWPWDMNPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VN
Sbjct: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVN 60

Query: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120
           AFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG
Sbjct: 61  AFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120

Query: 121 FVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180
           FVTQMEARN+QWLNI             LLHYDISYVPCFVILDKQGKALAKTGIPSSRL
Sbjct: 121 FVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180

Query: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 196
           HVIAGLSHLLKLKRPTTLPGSDNKQQPPC
Sbjct: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 209

[Close]

BLAST of Cp4.1LG07g04620 vs. NCBI nr
Match: XP_022144394.1 (uncharacterized protein LOC111014082 [Momordica charantia])

HSP 1 Score: 313 bits (803), Expect = 3.07e-106
Identity = 156/208 (75.00%), Postives = 170/208 (81.73%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           M STPKQP FCFKWPWD +PKNP DCSFEGPWLFKSLQNVG FA NF+N+VSKSSPPW+N
Sbjct: 1   MGSTPKQPFFCFKWPWDADPKNPFDCSFEGPWLFKSLQNVGAFAFNFVNKVSKSSPPWIN 60

Query: 61  AFKPLSFD----GNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCS 120
           AFKPL F+    GNK S  RKKL+PEEQGEAE+RAFA+ALASGKEATVIEFYSPKC LC+
Sbjct: 61  AFKPLHFEASNGGNKKSLPRKKLTPEEQGEAEHRAFASALASGKEATVIEFYSPKCRLCN 120

Query: 121 SLLGFVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIP 180
           SLL  V +MEARN+ WL+I             LLHYDI YVPCFV+LDK GKALAKTGIP
Sbjct: 121 SLLDVVMEMEARNSDWLSIVMADAENEKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLLKLKRPTTLPGSDNK 191
           SSRLHVIAGLSHLL LKRP +L GS NK
Sbjct: 181 SSRLHVIAGLSHLLNLKRPRSLLGSVNK 208

[Close]

BLAST of Cp4.1LG07g04620 vs. ExPASy TrEMBL
Match: A0A6J1KP92 (uncharacterized protein LOC111496027 OS=Cucurbita maxima OX=3661 GN=LOC111496027 PE=4 SV=1)

HSP 1 Score: 393 bits (1009), Expect = 5.79e-138
Identity = 191/209 (91.39%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           MRSTPKQPLFCFKWPWD+NPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN
Sbjct: 1   MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60

Query: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120
           AFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALA GKEATVIEFYSPKCPLCSSLLG
Sbjct: 61  AFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCSSLLG 120

Query: 121 FVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180
           FVTQMEARN+QWLNI             +LHYDISYVPCFVILDKQGKALAKTGIPSSRL
Sbjct: 121 FVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIPSSRL 180

Query: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 196
           HVIAGLSHLLKLKRPTTLPGSDNKQQPPC
Sbjct: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 209

[Close]

BLAST of Cp4.1LG07g04620 vs. ExPASy TrEMBL
Match: A0A6J1GJW7 (uncharacterized protein LOC111454558 OS=Cucurbita moschata OX=3662 GN=LOC111454558 PE=4 SV=1)

HSP 1 Score: 388 bits (997), Expect = 3.91e-136
Identity = 191/209 (91.39%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           MRSTPKQPLFCFKWPWDMNPKNPSDC FEGPWLFKSLQNVGVFA+NFLNEVSKSSPP VN
Sbjct: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCLFEGPWLFKSLQNVGVFAANFLNEVSKSSPPRVN 60

Query: 61  AFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120
           AFKPLSFDGNK+SKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG
Sbjct: 61  AFKPLSFDGNKISKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLLG 120

Query: 121 FVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180
           FVTQMEARN+QWLNI             LLHYDISYVPCFVILDKQGKALAKTGIPSSRL
Sbjct: 121 FVTQMEARNSQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIPSSRL 180

Query: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 196
           HVIAGLSHLLKLKRPTTLPGSDNKQQPPC
Sbjct: 181 HVIAGLSHLLKLKRPTTLPGSDNKQQPPC 209

[Close]

BLAST of Cp4.1LG07g04620 vs. ExPASy TrEMBL
Match: A0A6J1CS67 (uncharacterized protein LOC111014082 OS=Momordica charantia OX=3673 GN=LOC111014082 PE=4 SV=1)

HSP 1 Score: 313 bits (803), Expect = 1.49e-106
Identity = 156/208 (75.00%), Postives = 170/208 (81.73%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           M STPKQP FCFKWPWD +PKNP DCSFEGPWLFKSLQNVG FA NF+N+VSKSSPPW+N
Sbjct: 1   MGSTPKQPFFCFKWPWDADPKNPFDCSFEGPWLFKSLQNVGAFAFNFVNKVSKSSPPWIN 60

Query: 61  AFKPLSFD----GNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCS 120
           AFKPL F+    GNK S  RKKL+PEEQGEAE+RAFA+ALASGKEATVIEFYSPKC LC+
Sbjct: 61  AFKPLHFEASNGGNKKSLPRKKLTPEEQGEAEHRAFASALASGKEATVIEFYSPKCRLCN 120

Query: 121 SLLGFVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIP 180
           SLL  V +MEARN+ WL+I             LLHYDI YVPCFV+LDK GKALAKTGIP
Sbjct: 121 SLLDVVMEMEARNSDWLSIVMADAENEKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLLKLKRPTTLPGSDNK 191
           SSRLHVIAGLSHLL LKRP +L GS NK
Sbjct: 181 SSRLHVIAGLSHLLNLKRPRSLLGSVNK 208

[Close]

BLAST of Cp4.1LG07g04620 vs. ExPASy TrEMBL
Match: A0A1S3BAS7 (uncharacterized protein LOC103487919 OS=Cucumis melo OX=3656 GN=LOC103487919 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 1.39e-100
Identity = 150/203 (73.89%), Postives = 166/203 (81.77%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           M STPKQPLFCFKWPWD++ KN SDCSFEGPWLFKSLQNVG FA NF+N+VSKSSPPW+ 
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSKNRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPPWMT 60

Query: 61  AFKPLSFD----GNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCS 120
            FKPL F+    GNK+S+SRK L+PEEQGEAENRA AAALASGKEATVIEFYSPKC LC+
Sbjct: 61  -FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCN 120

Query: 121 SLLGFVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIP 180
           SLL  V ++EARN+ WLNI             LLHYDI YVPCFV+LDK GKALAKTGIP
Sbjct: 121 SLLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLLKLKRPTTLP 186
           SSRLHVIAGLSHL+KLK P + P
Sbjct: 181 SSRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of Cp4.1LG07g04620 vs. ExPASy TrEMBL
Match: A0A5A7TE38 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold45884G00010 PE=4 SV=1)

HSP 1 Score: 293 bits (751), Expect = 9.36e-99
Identity = 148/203 (72.91%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60
           M STPKQPLFCFKWPWD++ +N SDCSFEGPWLFKSLQNVG FA NF+N+VSKSSP W+ 
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSENRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPSWMT 60

Query: 61  AFKPLSFD----GNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCS 120
            FKPL F+    GNK+S+SRK L+PEEQGEAENRA AAALASGKEATVIEFYSPKC LC+
Sbjct: 61  -FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCN 120

Query: 121 SLLGFVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIP 180
           SLL  V ++EARN+ WLNI             LLHYDI YVPCFV+LDK GKALAKTGIP
Sbjct: 121 SLLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLLKLKRPTTLP 186
           SSRLHVIAGLSHL+KLK P + P
Sbjct: 181 SSRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of Cp4.1LG07g04620 vs. TAIR 10
Match: AT5G06430.1 (Thioredoxin superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 2.6e-53
Identity = 109/196 (55.61%), Postives = 131/196 (66.84%), Query Frame = 0


Query: 3   STPKQPLFCFKWPWDMN--PKNPSD-CSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWV 62
           ST K P FC KWPWD N  PK+ S  C F+GPWLF+S+Q +G  A + L    ++     
Sbjct: 11  STSKDPFFCLKWPWDSNKQPKSSSSVCDFQGPWLFRSMQTIGSIALSSLTSFGQNP---- 70

Query: 63  NAFKPLSFDGNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCSSLL 122
             F+P           +K LS  EQGEAE RAFAAALAS KEATV+EFYS KC LC+SLL
Sbjct: 71  -NFRP----------KKKPLSSSEQGEAEQRAFAAALASQKEATVLEFYSHKCRLCNSLL 130

Query: 123 GFVTQMEARNAQWLNI-------------LLHYDISYVPCFVILDKQGKALAKTGIPSSR 182
            FV ++E RN+ WL+I             LLHYD+ YVPCFV+LDK G+ALAKTG+PSSR
Sbjct: 131 KFVLEVEKRNSNWLSITMADAENEKWFPELLHYDVKYVPCFVLLDKNGQALAKTGVPSSR 190

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g04620 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g04620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537358.1	2.15e-140	93.78	uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo] >XP_023537359....	[more]
XP_023002017.1	1.20e-137	91.39	uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002018.1 uncharac...	[more]
KAG6585642.1	2.31e-137	91.87	hypothetical protein SDJN03_18375, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951826.1	8.08e-136	91.39	uncharacterized protein LOC111454558 [Cucurbita moschata] >XP_022951827.1 unchar...	[more]
XP_022144394.1	3.07e-106	75.00	uncharacterized protein LOC111014082 [Momordica charantia]	[more]

BLAST of Cp4.1LG07g04620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP92	5.79e-138	91.39	uncharacterized protein LOC111496027 OS=Cucurbita maxima OX=3661 GN=LOC111496027...	[more]
A0A6J1GJW7	3.91e-136	91.39	uncharacterized protein LOC111454558 OS=Cucurbita moschata OX=3662 GN=LOC1114545...	[more]
A0A6J1CS67	1.49e-106	75.00	uncharacterized protein LOC111014082 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A1S3BAS7	1.39e-100	73.89	uncharacterized protein LOC103487919 OS=Cucumis melo OX=3656 GN=LOC103487919 PE=...	[more]
A0A5A7TE38	9.36e-99	72.91	Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Cp4.1LG07g04620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06430.1	2.6e-53	55.61	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43601:SF11	EXPRESSED PROTEIN	coord: 1..183
None	No IPR available	PANTHER	PTHR43601	THIOREDOXIN, MITOCHONDRIAL	coord: 1..183
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 90..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g04620.1	Cp4.1LG07g04620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0009507	chloroplast