Cp4.1LG07g03780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g03780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein SHI RELATED SEQUENCE 5-like
Location	Cp4.1LG07: 2494578 .. 2495574 (+)
RNA-Seq Expression	Cp4.1LG07g03780
Synteny	Cp4.1LG07g03780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTATTTTCAAATATTAGGGCAAAAAAATGGCTGAATTGTTCTATGTAGGAGGAAGAGAAGAAGGCCCACCAAACAAAGAACAACAACACAAACAAACACAACCCACCTTGTTTATGTACCGAAACGACCAACAAATCCACCACAAAGGCTTCGAAATATGGCCTCCACATTACCAAACCCACTTCTCCTCCGCCGTTGGTCAGAGCCGCCGCACCGACTCCGATCACCCCTCCAGATCCGCCTTCACCGCCACCAGACCCGCCGCAGCCACTGCCGGAGGCATCAATTGCCAAGACTGTGGCAACCAAGCCAAGAAGGATTGTGCTTATTTGCGGTGTAGGACTTGCTGTAAGAGCCGAGGGTTTCACTGCCAGACTCACGTGAAGAGCACGTGGGTTCCGGCTGCTAAACGCCGTGAACGGCAGTTTTGTGGTGGGGATAATTCCAAACGACTTAGAGAAACCCAATCCGCCACCGCCACAGCCACCGCCACCCCTCGTTTGCCCGCCTCCTTCACCTCAGGTAAAAAATAAATAAAATAAATAAAAATAAATCCCTAAATTTTCTGACTAATTAATTAATTACACTGTTGGGTTAGAATTGGAGAAATTTCCATCGGAAGTGAACTCACCGGCGGTGTTTCGGTGTGTGAAAGTAAGCGCGATGGACGATGAGGATGAAGAGTTTGCATATCAGACGGCTGTGAATATCGGAGGCCACGTGTTCAAAGGAATTCTCTACGATCAAGGCTCTGAAGTCCATTACACCGCCGGCGAGAGCTCCTCCGGCCACGGAGGAGATGGATCAGTACACCCACTTAACTTAATTGCTGGACCCTCCAACCTCGCCGCCGCTTCCACCACTACCTCGGCTGCAACCAGCTCCAACCCCACCGCCGCCGTCGCGCCGTTGCTTGACCCTTCTATATATCCAGCTCCTCTTAATGCATTTATGGCTGGTACGCAGTTCTTCCCACCCTCTAGATCATGA

mRNA sequence

ATGGATGGCAAAAAAATGGCTGAATTGTTCTATGTAGGAGGAAGAGAAGAAGGCCCACCAAACAAAGAACAACAACACAAACAAACACAACCCACCTTGTTTATGTACCGAAACGACCAACAAATCCACCACAAAGGCTTCGAAATATGGCCTCCACATTACCAAACCCACTTCTCCTCCGCCGTTGGTCAGAGCCGCCGCACCGACTCCGATCACCCCTCCAGATCCGCCTTCACCGCCACCAGACCCGCCGCAGCCACTGCCGGAGGCATCAATTGCCAAGACTGTGGCAACCAAGCCAAGAAGGATTGTGCTTATTTGCGGTGTAGGACTTGCTGTAAGAGCCGAGGGTTTCACTGCCAGACTCACGTGAAGAGCACGTGGGTTCCGGCTGCTAAACGCCGTGAACGGCAGTTTTGTGGTGGGGATAATTCCAAACGACTTAGAGAAACCCAATCCGCCACCGCCACAGCCACCGCCACCCCTCGTTTGCCCGCCTCCTTCACCTCAGAATTGGAGAAATTTCCATCGGAAGTGAACTCACCGGCGGTGTTTCGGTGTGTGAAAGTAAGCGCGATGGACGATGAGGATGAAGAGTTTGCATATCAGACGGCTGTGAATATCGGAGGCCACGTGTTCAAAGGAATTCTCTACGATCAAGGCTCTGAAGTCCATTACACCGCCGGCGAGAGCTCCTCCGGCCACGGAGGAGATGGATCAGTACACCCACTTAACTTAATTGCTGGACCCTCCAACCTCGCCGCCGCTTCCACCACTACCTCGGCTGCAACCAGCTCCAACCCCACCGCCGCCGTCGCGCCGTTGCTTGACCCTTCTATATATCCAGCTCCTCTTAATGCATTTATGGCTGGTACGCAGTTCTTCCCACCCTCTAGATCATGA

Coding sequence (CDS)

ATGGATGGCAAAAAAATGGCTGAATTGTTCTATGTAGGAGGAAGAGAAGAAGGCCCACCAAACAAAGAACAACAACACAAACAAACACAACCCACCTTGTTTATGTACCGAAACGACCAACAAATCCACCACAAAGGCTTCGAAATATGGCCTCCACATTACCAAACCCACTTCTCCTCCGCCGTTGGTCAGAGCCGCCGCACCGACTCCGATCACCCCTCCAGATCCGCCTTCACCGCCACCAGACCCGCCGCAGCCACTGCCGGAGGCATCAATTGCCAAGACTGTGGCAACCAAGCCAAGAAGGATTGTGCTTATTTGCGGTGTAGGACTTGCTGTAAGAGCCGAGGGTTTCACTGCCAGACTCACGTGAAGAGCACGTGGGTTCCGGCTGCTAAACGCCGTGAACGGCAGTTTTGTGGTGGGGATAATTCCAAACGACTTAGAGAAACCCAATCCGCCACCGCCACAGCCACCGCCACCCCTCGTTTGCCCGCCTCCTTCACCTCAGAATTGGAGAAATTTCCATCGGAAGTGAACTCACCGGCGGTGTTTCGGTGTGTGAAAGTAAGCGCGATGGACGATGAGGATGAAGAGTTTGCATATCAGACGGCTGTGAATATCGGAGGCCACGTGTTCAAAGGAATTCTCTACGATCAAGGCTCTGAAGTCCATTACACCGCCGGCGAGAGCTCCTCCGGCCACGGAGGAGATGGATCAGTACACCCACTTAACTTAATTGCTGGACCCTCCAACCTCGCCGCCGCTTCCACCACTACCTCGGCTGCAACCAGCTCCAACCCCACCGCCGCCGTCGCGCCGTTGCTTGACCCTTCTATATATCCAGCTCCTCTTAATGCATTTATGGCTGGTACGCAGTTCTTCCCACCCTCTAGATCATGA

Protein sequence

MDGKKMAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLNLIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS

Homology

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BLAST of Cp4.1LG07g03780 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-59
Identity = 156/365 (42.74%), Postives = 202/365 (55.34%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQ------PT----LFMYRNDQQIHH---------KG 65
           MA  F +GG      N+EQQH++        PT     F+YRN+   HH         KG
Sbjct: 1   MANFFSLGG------NQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKG 60

Query: 66  FEIW-----PPH---------------------YQTHFSSAVGQSRR----TDSDH-PSR 125
           FE+W     P H                     Y T     VG SR     +  DH  SR
Sbjct: 61  FELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASR 120

Query: 126 SAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRR 185
           S F   R   +  GGI+CQDCGNQAKKDC ++RCRTCCKSRGF CQTHVKSTWVPAAKRR
Sbjct: 121 SGFVMMR---SGGGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRR 180

Query: 186 ERQ-------------FCGGDNSKRLRETQSATATATATPRLPASFTS-ELEKFPSEVNS 245
           ERQ                 +N K  R+ +  +A++  + RLP++    E+ KFPS+V +
Sbjct: 181 ERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRT 240

Query: 246 PAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHY-----TAGESSSGHG 301
            AVF+C+++S+++D++++ AYQ AV+IGGHVFKGILYDQG E  Y       G++SSG  
Sbjct: 241 SAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGS 300

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.5e-56
Identity = 149/367 (40.60%), Postives = 191/367 (52.04%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQPT---------LFMYRNDQQIHHKGFEIWPPHY-- 65
           MA  FY+GGR+    N +Q H Q             L++Y+++   ++KGFEIWPP Y  
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 66  ----------QTH---------FSSAVGQSRRTDSDHPSRS------------AFTATRP 125
                     Q H         F      S   ++++ SRS             FT TR 
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTR- 120

Query: 126 AAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRE------- 185
                GG+NCQDCGNQAKKDC ++RCRTCCKSRGFHCQTHVKSTWVPAAKRRE       
Sbjct: 121 ----QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLAS 180

Query: 186 -----------------RQFCGGDNSKRLRETQSATATATATPRLPASFTSELE---KFP 245
                            R+  GGDN+     +    +    T  + A+  S LE     P
Sbjct: 181 LQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLP 240

Query: 246 SEVNSPAVFRCVKVSAM--DDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSG 301
            EVNSPA+FRCV+VS++  D++D+ +AYQTAVNIGGH+FKGILYDQG E           
Sbjct: 241 PEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE----------- 300

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 4.6e-54
Identity = 136/298 (45.64%), Postives = 180/298 (60.40%), Query Frame = 0


Query: 25  QHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQSRRTDSDHPSRSAFTATRPA 84
           QH+Q Q  L +Y +       G  + P ++     S  G++    +   +      +  +
Sbjct: 83  QHQQHQQRLDLYSS-----AAGLGVGPSNHNQFDIS--GETSTAGAGRAAAMMMIRSGGS 142

Query: 85  AATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQF----- 144
              +GG++CQDCGNQAKKDC+++RCRTCCKSRGF C THV+STWVPAAKRRERQ      
Sbjct: 143 GGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATV 202

Query: 145 -------CGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVFRCVKVSA 204
                   G    KR RE   AT+++    R+P+    E+  FP+EV+S AVFRCV+VS+
Sbjct: 203 QPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSS 262

Query: 205 MDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVH-------YTAGESSSGHGGDGSVHPLN 264
           ++D +EEFAYQTAV+IGGH+FKGILYD G             AGESSSG GG      LN
Sbjct: 263 VEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGG---AQQLN 322

Query: 265 LI-AGPSNLAAASTTT-SAATSSNPTAAVAPLLDP-SIYPAPLNAFMAGTQFFPPSRS 301
           LI AG   +A AS++T +     + +AA A  +DP ++YP P+N FMAGTQFFP  RS
Sbjct: 323 LITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFMAGTQFFPNPRS 370

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-52
Identity = 157/361 (43.49%), Postives = 206/361 (57.06%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQ-------TQPTLFMYRNDQQIHHKGFEIWPPHY---- 65
           MA LFY+GGR+    NK+  H++       +   L++Y+++   ++KGFEI+PP Y    
Sbjct: 1   MAGLFYLGGRDH---NKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQ 60

Query: 66  --QTHFSSA--------------VGQSRRTD--------SDH-PSRSA---FTATRPAAA 125
             Q H ++               +  +R T+        SDH P RS+   FT TR    
Sbjct: 61  QQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR---- 120

Query: 126 TAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQF------- 185
             G +NCQDCGNQAKKDC ++RCRTCCKSRGF CQTHVKSTWV AAKRRERQ        
Sbjct: 121 -QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPA 180

Query: 186 ---------CGGDNSKRLRETQS----ATATATATPRLPASFTSELE--KFPSEVNSPAV 245
                     GGD+    +E +        +A A  R+  + +S LE    P E++SPAV
Sbjct: 181 KRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAV 240

Query: 246 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQG-SEVHYTAGESSSGHGGDGSVHP 300
           FRC++VS++DDEDEE+AYQTAV+IGGHVFKGILYDQG S  H+    SSS +G     H 
Sbjct: 241 FRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHR--YSSSLNGETSHQHH 300

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.3e-51
Identity = 143/307 (46.58%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 14  GREEGPPNKEQ----QHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQSRRTD 73
           G E GP  K      QH   Q  +F  +  QQ   +  ++    Y +     VG S R+ 
Sbjct: 46  GGEAGPSYKGTLELWQHPNNQEIIFQQQQQQQ---QRLDL----YTSAAGLGVGPSNRSL 105

Query: 74  SDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWV 133
            +  S  A    R + + +GG +CQDCGNQ+KKDC+++RCRTCCKSRG  C THVKSTWV
Sbjct: 106 IE-TSGGALMMMR-SGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWV 165

Query: 134 PAAKRRER----------QFCGGDNSKRLRETQSATATATATPRLPASFTSELE--KFPS 193
           PAAKRRER          Q  GG   KR RE   A +T+ A  R+P++ TS LE   FP 
Sbjct: 166 PAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPP 225

Query: 194 EVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGG 253
           EV+S AVFRCV+VS++DDE+EE+AY+TAV+IGGHVFKG+LYDQG      A  SSSG   
Sbjct: 226 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG-----PAERSSSG--- 285

Query: 254 DGSVHPLNLI-AGPSNLAAASTTTSAATSSNPTAAVAP-LLDPSI--YPAPLNAFMAGTQ 301
            G   PLNLI AGPS   A+S++ + + ++    + +   +DP+   YP P+N FM GT 
Sbjct: 286 -GGSQPLNLITAGPS---ASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTH 331

[Close]

BLAST of Cp4.1LG07g03780 vs. NCBI nr
Match: XP_023537095.1 (protein SHI RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 596 bits (1536), Expect = 8.54e-215
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQS 65
           MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQS
Sbjct: 1   MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQS 60

Query: 66  RRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVK 125
           RRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVK
Sbjct: 61  RRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVK 120

Query: 126 STWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVF 185
           STWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVF
Sbjct: 121 STWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVF 180

Query: 186 RCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLN 245
           RCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLN
Sbjct: 181 RCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLN 240

Query: 246 LIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           LIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS
Sbjct: 241 LIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 295

[Close]

BLAST of Cp4.1LG07g03780 vs. NCBI nr
Match: KAG7020474.1 (Protein SHI RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 577 bits (1486), Expect = 4.31e-207
Identity = 291/300 (97.00%), Postives = 293/300 (97.67%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKE--QQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG 65
           MAELFYVGGREEGPPNKE  QQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG
Sbjct: 1   MAELFYVGGREEGPPNKEEQQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG 60

Query: 66  QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH 125
           QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH
Sbjct: 61  QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH 120

Query: 126 VKSTWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPA 185
           VKSTWVPAAKRRERQF GGDNSKRLRETQSATATATATPRLP+SFTSELEKFPSEVNSPA
Sbjct: 121 VKSTWVPAAKRRERQFRGGDNSKRLRETQSATATATATPRLPSSFTSELEKFPSEVNSPA 180

Query: 186 VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP 245
           VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP
Sbjct: 181 VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP 240

Query: 246 LNLIAGPSNLAAASTTTSAATSSNPTA---AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           LNLIAGPSN AAASTTTSAATS+NPTA   AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS
Sbjct: 241 LNLIAGPSNAAAASTTTSAATSNNPTATAAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300

[Close]

BLAST of Cp4.1LG07g03780 vs. NCBI nr
Match: XP_022951739.1 (protein SHI RELATED SEQUENCE 5-like [Cucurbita moschata])

HSP 1 Score: 567 bits (1462), Expect = 1.82e-203
Identity = 289/300 (96.33%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKE--QQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG 65
           MAELFYVGGREEGPPNKE  QQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG
Sbjct: 1   MAELFYVGGREEGPPNKEEQQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG 60

Query: 66  QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH 125
           QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH
Sbjct: 61  QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH 120

Query: 126 VKSTWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPA 185
           VKSTWVPAAKRRERQF  GDNSKRLRETQSATATAT  PRLP+SFTSELEKFPSEVNSPA
Sbjct: 121 VKSTWVPAAKRRERQFRSGDNSKRLRETQSATATAT--PRLPSSFTSELEKFPSEVNSPA 180

Query: 186 VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP 245
           VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP
Sbjct: 181 VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP 240

Query: 246 LNLIAGPSNLAAASTTTSAATSSNPTA---AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           LNLIAGPSN AAASTTTSAATSSNPTA   AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS
Sbjct: 241 LNLIAGPSNAAAASTTTSAATSSNPTATAAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 298

[Close]

BLAST of Cp4.1LG07g03780 vs. NCBI nr
Match: XP_023002453.1 (protein SHI RELATED SEQUENCE 5-like [Cucurbita maxima])

HSP 1 Score: 548 bits (1412), Expect = 7.33e-196
Identity = 281/299 (93.98%), Postives = 283/299 (94.65%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQ-QHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQ 65
           MAELFYVGGREEGPPNKEQ Q KQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQ
Sbjct: 1   MAELFYVGGREEGPPNKEQEQQKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQ 60

Query: 66  SRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHV 125
           S RTDSDHPSRSAFTATRPAAA AGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHV
Sbjct: 61  SHRTDSDHPSRSAFTATRPAAAIAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHV 120

Query: 126 KSTWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAV 185
           KSTWVPAAKRRERQF GGDNSKRLRETQSATATAT    LP+SFTSELEKFPSEVNSPAV
Sbjct: 121 KSTWVPAAKRRERQFRGGDNSKRLRETQSATATATL--HLPSSFTSELEKFPSEVNSPAV 180

Query: 186 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPL 245
           FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGH GDGSVHPL
Sbjct: 181 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHVGDGSVHPL 240

Query: 246 NLIAGPSNLAAASTTTSAATSSNPTA---AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           NLIAGPSN AAASTTTSAATSSNPTA   AVA LLDP IYPAPLNAF+AGTQFFPPSRS
Sbjct: 241 NLIAGPSNAAAASTTTSAATSSNPTATAAAVASLLDPPIYPAPLNAFIAGTQFFPPSRS 297

[Close]

BLAST of Cp4.1LG07g03780 vs. NCBI nr
Match: XP_023537096.1 (protein SHI RELATED SEQUENCE 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 546 bits (1407), Expect = 1.95e-195
Identity = 276/295 (93.56%), Postives = 276/295 (93.56%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQS 65
           MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQS
Sbjct: 1   MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQS 60

Query: 66  RRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVK 125
           RRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVK
Sbjct: 61  RRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVK 120

Query: 126 STWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVF 185
           STWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTS               
Sbjct: 121 STWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTS--------------- 180

Query: 186 RCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLN 245
               VSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLN
Sbjct: 181 ----VSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPLN 240

Query: 246 LIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           LIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS
Sbjct: 241 LIAGPSNLAAASTTTSAATSSNPTAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 276

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy TrEMBL
Match: A0A6J1GJN6 (protein SHI RELATED SEQUENCE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111454480 PE=3 SV=1)

HSP 1 Score: 567 bits (1462), Expect = 8.82e-204
Identity = 289/300 (96.33%), Postives = 290/300 (96.67%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKE--QQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG 65
           MAELFYVGGREEGPPNKE  QQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG
Sbjct: 1   MAELFYVGGREEGPPNKEEQQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVG 60

Query: 66  QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH 125
           QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH
Sbjct: 61  QSRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTH 120

Query: 126 VKSTWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPA 185
           VKSTWVPAAKRRERQF  GDNSKRLRETQSATATAT  PRLP+SFTSELEKFPSEVNSPA
Sbjct: 121 VKSTWVPAAKRRERQFRSGDNSKRLRETQSATATAT--PRLPSSFTSELEKFPSEVNSPA 180

Query: 186 VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP 245
           VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP
Sbjct: 181 VFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHP 240

Query: 246 LNLIAGPSNLAAASTTTSAATSSNPTA---AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           LNLIAGPSN AAASTTTSAATSSNPTA   AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS
Sbjct: 241 LNLIAGPSNAAAASTTTSAATSSNPTATAAAVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 298

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy TrEMBL
Match: A0A6J1KTL2 (protein SHI RELATED SEQUENCE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111496289 PE=3 SV=1)

HSP 1 Score: 548 bits (1412), Expect = 3.55e-196
Identity = 281/299 (93.98%), Postives = 283/299 (94.65%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQ-QHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQ 65
           MAELFYVGGREEGPPNKEQ Q KQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQ
Sbjct: 1   MAELFYVGGREEGPPNKEQEQQKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQ 60

Query: 66  SRRTDSDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHV 125
           S RTDSDHPSRSAFTATRPAAA AGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHV
Sbjct: 61  SHRTDSDHPSRSAFTATRPAAAIAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHV 120

Query: 126 KSTWVPAAKRRERQFCGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAV 185
           KSTWVPAAKRRERQF GGDNSKRLRETQSATATAT    LP+SFTSELEKFPSEVNSPAV
Sbjct: 121 KSTWVPAAKRRERQFRGGDNSKRLRETQSATATATL--HLPSSFTSELEKFPSEVNSPAV 180

Query: 186 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGGDGSVHPL 245
           FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGH GDGSVHPL
Sbjct: 181 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHVGDGSVHPL 240

Query: 246 NLIAGPSNLAAASTTTSAATSSNPTA---AVAPLLDPSIYPAPLNAFMAGTQFFPPSRS 300
           NLIAGPSN AAASTTTSAATSSNPTA   AVA LLDP IYPAPLNAF+AGTQFFPPSRS
Sbjct: 241 NLIAGPSNAAAASTTTSAATSSNPTATAAAVASLLDPPIYPAPLNAFIAGTQFFPPSRS 297

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy TrEMBL
Match: A0A6J1HC07 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462711 PE=3 SV=1)

HSP 1 Score: 419 bits (1077), Expect = 1.51e-144
Identity = 235/339 (69.32%), Postives = 256/339 (75.52%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTH-------- 65
           MA  FY+GG  EGPPNK+++ ++ +  LFMYRN++ I++KGFEIWP  Y  H        
Sbjct: 1   MAGFFYLGGGREGPPNKQEEEEEREQNLFMYRNEE-IYNKGFEIWPQQYTNHHQNPSLTD 60

Query: 66  -FSSAVGQSRRT----DSDHPSRSAFTATRPAAATA--------GGINCQDCGNQAKKDC 125
             S  VG SRR+    DSD PSRSAFT  RPAAA A        GG+NCQDCGNQAKKDC
Sbjct: 61  HLSFGVGPSRRSFMINDSDEPSRSAFTVMRPAAAFAASAAAAAGGGMNCQDCGNQAKKDC 120

Query: 126 AYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQ--------------FCGGDNSKRLRE 185
           AYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQ              F GG+NSKR RE
Sbjct: 121 AYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQQQQQQEQFRGGENSKRQRE 180

Query: 186 TQ------SATATATATPRLPASFTS--ELEKFPSEVNSPAVFRCVKVSAMDDEDEEFAY 245
           TQ      +ATA+ATA PRLP S TS  EL +FPSEVNSPAVFRCVKVSAMDD DEEFAY
Sbjct: 181 TQITTAVSAATASATACPRLP-SITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFAY 240

Query: 246 QTAVNIGGHVFKGILYDQGSEVHYTA-GESSSGHGGDGSVHPLNLIAGPSNLAAASTTTS 300
           QTAVNIGGHVFKGILYDQG EV YTA GESSSGHGGDGS HPLNLIAG SN    S +TS
Sbjct: 241 QTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNPGPTSASTS 300

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy TrEMBL
Match: A0A6J1KC02 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491917 PE=3 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 7.12e-143
Identity = 235/340 (69.12%), Postives = 256/340 (75.29%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTH-------- 65
           MA  FY+GG  EGPPNK+++ ++ +  LFMYRN++ I++KGFEIWP  Y  H        
Sbjct: 1   MAGFFYLGGGREGPPNKQEEEEEREQNLFMYRNEE-IYNKGFEIWPQQYTNHHQNPSLTD 60

Query: 66  -FSSAVGQSRRT----DSDHPSRSAFTATRPAAATA---------GGINCQDCGNQAKKD 125
             S  VG SRR+    DSD PSRSAFT  RPAAA A         GG+NCQDCGNQAKKD
Sbjct: 61  HLSFGVGPSRRSFMINDSDEPSRSAFTVMRPAAAFAASAAAAAAGGGMNCQDCGNQAKKD 120

Query: 126 CAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQ--------------FCGGDNSKRLR 185
           CAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQ              F GG+NSKR R
Sbjct: 121 CAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQQQQQQEQFRGGENSKRQR 180

Query: 186 ETQ------SATATATATPRLPASFTS--ELEKFPSEVNSPAVFRCVKVSAMDDEDEEFA 245
           ETQ      +ATA+ATA PRLP S TS  EL +FPSEVNSPAVFRCVKVSAMDD DEEFA
Sbjct: 181 ETQITTTVSAATASATACPRLP-SITSGLELAQFPSEVNSPAVFRCVKVSAMDDADEEFA 240

Query: 246 YQTAVNIGGHVFKGILYDQGSEVHYTA-GESSSGHGGDGSVHPLNLIAGPSNLAAASTTT 300
           YQTAVNIGGHVFKGILYDQG EV YTA GESSSGHGGDGS HPLNLIAG SN    S +T
Sbjct: 241 YQTAVNIGGHVFKGILYDQGPEVRYTAAGESSSGHGGDGSTHPLNLIAGSSNAGPTSAST 300

[Close]

BLAST of Cp4.1LG07g03780 vs. ExPASy TrEMBL
Match: A0A0A0LNQ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G364580 PE=3 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 1.66e-141
Identity = 238/353 (67.42%), Postives = 257/353 (72.80%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNK-EQQHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQT-------- 65
           MA  FY+GG  EGPPNK E+  ++ +  LF+YRNDQ+I++KGFEIWP  Y          
Sbjct: 1   MAGFFYLGGGREGPPNKQEEDEEEREQNLFLYRNDQEIYNKGFEIWPQQYNNNNNHQHQQ 60

Query: 66  -------HFSSAVGQSRRT-----DSDHPSRSAFTATRPAAA----------TAGGINCQ 125
                  H S  VG SRR+      SD PSRSAFT  RPAAA          TAGG+NCQ
Sbjct: 61  PNPSLPNHLSFGVGPSRRSFMINDPSDEPSRSAFTLMRPAAAAFAAAAASAATAGGMNCQ 120

Query: 126 DCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQ--------------FC 185
           DCGNQAKKDCAYLRCRTCCKSRGF CQTHVKSTWVPAAKRRERQ              F 
Sbjct: 121 DCGNQAKKDCAYLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQIAALQHQQQQEQFR 180

Query: 186 GGDNSKRLRETQSATA-------TATATPRLPASFTS--ELEKFPSEVNSPAVFRCVKVS 245
           GGDNSKRLRETQ+ATA       +A+A PRLP S TS  EL +FPSEVNSPAVFRCVKVS
Sbjct: 181 GGDNSKRLRETQTATAIAAAPTASASACPRLP-SITSGLELAQFPSEVNSPAVFRCVKVS 240

Query: 246 AMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTA-GESSSGHGGDGSVHPLNLIAGP 300
           AMDD DEEFAYQTAVNIGGHVFKGILYDQG E+ YTA GESSSGHGGDGS HPLNLIAGP
Sbjct: 241 AMDDADEEFAYQTAVNIGGHVFKGILYDQGPELRYTAAGESSSGHGGDGSTHPLNLIAGP 300

[Close]

BLAST of Cp4.1LG07g03780 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 219.2 bits (557), Expect = 4.6e-57
Identity = 149/367 (40.60%), Postives = 191/367 (52.04%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQTQPT---------LFMYRNDQQIHHKGFEIWPPHY-- 65
           MA  FY+GGR+    N +Q H Q             L++Y+++   ++KGFEIWPP Y  
Sbjct: 1   MAGFFYLGGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYFQ 60

Query: 66  ----------QTH---------FSSAVGQSRRTDSDHPSRS------------AFTATRP 125
                     Q H         F      S   ++++ SRS             FT TR 
Sbjct: 61  QQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTR- 120

Query: 126 AAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRE------- 185
                GG+NCQDCGNQAKKDC ++RCRTCCKSRGFHCQTHVKSTWVPAAKRRE       
Sbjct: 121 ----QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLAS 180

Query: 186 -----------------RQFCGGDNSKRLRETQSATATATATPRLPASFTSELE---KFP 245
                            R+  GGDN+     +    +    T  + A+  S LE     P
Sbjct: 181 LQHHSASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLP 240

Query: 246 SEVNSPAVFRCVKVSAM--DDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSG 301
            EVNSPA+FRCV+VS++  D++D+ +AYQTAVNIGGH+FKGILYDQG E           
Sbjct: 241 PEVNSPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPE----------- 300

[Close]

BLAST of Cp4.1LG07g03780 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 213.0 bits (541), Expect = 3.3e-55
Identity = 136/298 (45.64%), Postives = 180/298 (60.40%), Query Frame = 0


Query: 25  QHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQSRRTDSDHPSRSAFTATRPA 84
           QH+Q Q  L +Y +       G  + P ++     S  G++    +   +      +  +
Sbjct: 83  QHQQHQQRLDLYSS-----AAGLGVGPSNHNQFDIS--GETSTAGAGRAAAMMMIRSGGS 142

Query: 85  AATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQF----- 144
              +GG++CQDCGNQAKKDC+++RCRTCCKSRGF C THV+STWVPAAKRRERQ      
Sbjct: 143 GGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATV 202

Query: 145 -------CGGDNSKRLRETQSATATATATPRLPASFTSELEKFPSEVNSPAVFRCVKVSA 204
                   G    KR RE   AT+++    R+P+    E+  FP+EV+S AVFRCV+VS+
Sbjct: 203 QPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSSSAVFRCVRVSS 262

Query: 205 MDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVH-------YTAGESSSGHGGDGSVHPLN 264
           ++D +EEFAYQTAV+IGGH+FKGILYD G             AGESSSG GG      LN
Sbjct: 263 VEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSGGGG---AQQLN 322

Query: 265 LI-AGPSNLAAASTTT-SAATSSNPTAAVAPLLDP-SIYPAPLNAFMAGTQFFPPSRS 301
           LI AG   +A AS++T +     + +AA A  +DP ++YP P+N FMAGTQFFP  RS
Sbjct: 323 LITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFMAGTQFFPNPRS 370

[Close]

BLAST of Cp4.1LG07g03780 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-53
Identity = 157/361 (43.49%), Postives = 206/361 (57.06%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQ-------TQPTLFMYRNDQQIHHKGFEIWPPHY---- 65
           MA LFY+GGR+    NK+  H++       +   L++Y+++   ++KGFEI+PP Y    
Sbjct: 1   MAGLFYLGGRDH---NKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQ 60

Query: 66  --QTHFSSA--------------VGQSRRTD--------SDH-PSRSA---FTATRPAAA 125
             Q H ++               +  +R T+        SDH P RS+   FT TR    
Sbjct: 61  QQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR---- 120

Query: 126 TAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQF------- 185
             G +NCQDCGNQAKKDC ++RCRTCCKSRGF CQTHVKSTWV AAKRRERQ        
Sbjct: 121 -QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPA 180

Query: 186 ---------CGGDNSKRLRETQS----ATATATATPRLPASFTSELE--KFPSEVNSPAV 245
                     GGD+    +E +        +A A  R+  + +S LE    P E++SPAV
Sbjct: 181 KRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAV 240

Query: 246 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQG-SEVHYTAGESSSGHGGDGSVHP 300
           FRC++VS++DDEDEE+AYQTAV+IGGHVFKGILYDQG S  H+    SSS +G     H 
Sbjct: 241 FRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHR--YSSSLNGETSHQHH 300

[Close]

BLAST of Cp4.1LG07g03780 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-53
Identity = 157/361 (43.49%), Postives = 206/361 (57.06%), Query Frame = 0


Query: 6   MAELFYVGGREEGPPNKEQQHKQ-------TQPTLFMYRNDQQIHHKGFEIWPPHY---- 65
           MA LFY+GGR+    NK+  H++       +   L++Y+++   ++KGFEI+PP Y    
Sbjct: 1   MAGLFYLGGRDH---NKQDHHQEKDHNEDKSNNYLYLYKDEIYNNNKGFEIFPPQYFQQQ 60

Query: 66  --QTHFSSA--------------VGQSRRTD--------SDH-PSRSA---FTATRPAAA 125
             Q H ++               +  +R T+        SDH P RS+   FT TR    
Sbjct: 61  QQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDHEPVRSSTGGFTVTR---- 120

Query: 126 TAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWVPAAKRRERQF------- 185
             G +NCQDCGNQAKKDC ++RCRTCCKSRGF CQTHVKSTWV AAKRRERQ        
Sbjct: 121 -QGNMNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVSAAKRRERQAQLAVLPA 180

Query: 186 ---------CGGDNSKRLRETQS----ATATATATPRLPASFTSELE--KFPSEVNSPAV 245
                     GGD+    +E +        +A A  R+  + +S LE    P E++SPAV
Sbjct: 181 KRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNASSSGLETSHLPPEISSPAV 240

Query: 246 FRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQG-SEVHYTAGESSSGHGGDGSVHP 300
           FRC++VS++DDEDEE+AYQTAV+IGGHVFKGILYDQG S  H+    SSS +G     H 
Sbjct: 241 FRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSDHHR--YSSSLNGETSHQHH 300

[Close]

BLAST of Cp4.1LG07g03780 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 204.9 bits (520), Expect = 9.0e-53
Identity = 143/307 (46.58%), Postives = 185/307 (60.26%), Query Frame = 0


Query: 14  GREEGPPNKEQ----QHKQTQPTLFMYRNDQQIHHKGFEIWPPHYQTHFSSAVGQSRRTD 73
           G E GP  K      QH   Q  +F  +  QQ   +  ++    Y +     VG S R+ 
Sbjct: 46  GGEAGPSYKGTLELWQHPNNQEIIFQQQQQQQ---QRLDL----YTSAAGLGVGPSNRSL 105

Query: 74  SDHPSRSAFTATRPAAATAGGINCQDCGNQAKKDCAYLRCRTCCKSRGFHCQTHVKSTWV 133
            +  S  A    R + + +GG +CQDCGNQ+KKDC+++RCRTCCKSRG  C THVKSTWV
Sbjct: 106 IE-TSGGALMMMR-SGSGSGGPSCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWV 165

Query: 134 PAAKRRER----------QFCGGDNSKRLRETQSATATATATPRLPASFTSELE--KFPS 193
           PAAKRRER          Q  GG   KR RE   A +T+ A  R+P++ TS LE   FP 
Sbjct: 166 PAAKRRERQQQLSTGQQPQQLGGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPP 225

Query: 194 EVNSPAVFRCVKVSAMDDEDEEFAYQTAVNIGGHVFKGILYDQGSEVHYTAGESSSGHGG 253
           EV+S AVFRCV+VS++DDE+EE+AY+TAV+IGGHVFKG+LYDQG      A  SSSG   
Sbjct: 226 EVSSSAVFRCVRVSSVDDEEEEYAYKTAVSIGGHVFKGVLYDQG-----PAERSSSG--- 285

Query: 254 DGSVHPLNLI-AGPSNLAAASTTTSAATSSNPTAAVAP-LLDPSI--YPAPLNAFMAGTQ 301
            G   PLNLI AGPS   A+S++ + + ++    + +   +DP+   YP P+N FM GT 
Sbjct: 286 -GGSQPLNLITAGPS---ASSSSPNVSCNNGVVGSTSDHYIDPASLNYPTPINTFMTGTH 331

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g03780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
K4B6C9	1.6e-59	42.74	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	6.5e-56	40.60	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9SD40	4.6e-54	45.64	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9FXH7	2.5e-52	43.49	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]
Q9XGX0	1.3e-51	46.58	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]

BLAST of Cp4.1LG07g03780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537095.1	8.54e-215	100.00	protein SHI RELATED SEQUENCE 5-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7020474.1	4.31e-207	97.00	Protein SHI RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022951739.1	1.82e-203	96.33	protein SHI RELATED SEQUENCE 5-like [Cucurbita moschata]	[more]
XP_023002453.1	7.33e-196	93.98	protein SHI RELATED SEQUENCE 5-like [Cucurbita maxima]	[more]
XP_023537096.1	1.95e-195	93.56	protein SHI RELATED SEQUENCE 5-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG07g03780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJN6	8.82e-204	96.33	protein SHI RELATED SEQUENCE 5-like OS=Cucurbita moschata OX=3662 GN=LOC11145448...	[more]
A0A6J1KTL2	3.55e-196	93.98	protein SHI RELATED SEQUENCE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111496289 ...	[more]
A0A6J1HC07	1.51e-144	69.32	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita moschata OX=3662 GN=LOC11146271...	[more]
A0A6J1KC02	7.12e-143	69.12	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491917 ...	[more]
A0A0A0LNQ5	1.66e-141	67.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G364580 PE=3 SV=1	[more]

BLAST of Cp4.1LG07g03780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75520.1	4.6e-57	40.60	SHI-related sequence 5	[more]
AT3G51060.1	3.3e-55	45.64	Lateral root primordium (LRP) protein-related	[more]
AT1G19790.1	1.8e-53	43.49	SHI-related sequence 7	[more]
AT1G19790.2	1.8e-53	43.49	SHI-related sequence 7	[more]
AT5G66350.1	9.0e-53	46.58	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 92..134 e-value: 1.0E-27 score: 93.7
None	No IPR available	PFAM	PF05142	DUF702	coord: 90..223 e-value: 5.5E-56 score: 189.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..161
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..161
None	No IPR available	PANTHER	PTHR31604:SF2	PROTEIN SHI RELATED SEQUENCE 7	coord: 6..297
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 174..221 e-value: 1.0E-26 score: 90.5
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 6..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g03780.1	Cp4.1LG07g03780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding