Cp4.1LG07g03590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g03590
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RAC-like GTP binding protein 5
Location	Cp4.1LG07: 2289537 .. 2292668 (-)
RNA-Seq Expression	Cp4.1LG07g03590
Synteny	Cp4.1LG07g03590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGGAAAGGGGGTATGTGTGGTAGAAGAGGAGGCGCTATAGGTGGCAGAAGGTGAGCAAGGCCGGCGAGCGCTTCAACCGCAATTCATTTCCTTTCCCCTTTCAAAATAACCCTTCTTCGCTTCTCTCTCTTTCTCTCTTTCTCTCTGTTCCTGCAATTCGGGATCTCTCCACGCTGCATTTTCCATTTCCCCTTTTCAAGAATTCAGATCCTCCGTTCTCTTGATTCCAAACTCTTTCATGGAATACTGTTGATTTTCTCGCTTTCTTCTTCTTTCTCTTCCGTTCTGTTCTGTTCTGTTCTGTTCTGTTCTGTTTGGTCTCATGAACAATCGATTCTGAGCAACCAACCCACTGTAGTTTTCGGGTTACAGATCTGGTGCTTCGAGATGAGTGCGTCCAGGTTTATAAAGTGCGTTACGGTGGGCGATGGTGCTGTGGGTAAAACCTGTATGTTGATTTCTTATACGAGTAACACCTTTCCCACGGTGAGTTTGTTTGATTTTTTTTTTTTTGTTTATGAGATCATTCTCGCTTGCTTGTTGTTCTTTTGGTTTTGATGGATCTTGTGGAAGAACCATGGGATGAAGGAAATAACAATGTAGGATGCTTAAGAGGGAATGTTCTTGATAATAGTTCCGTTGGCTGAGTTTATTTCATTGCGTTTTCTGATTCTTCATGATATGATTTCAATGGCGTAAAAAGAAGGATTGAATTCCTTTTGTGAAGATTATTGTTGTTTCCTGTTTATTCTTTTTAAAGGCATTTTGAAGAGATTGGAAGACGATAGAACATGATTTTGAATATGAAAGTTGTTTGGTGTGTTCTTTCTTACCCGTGGTTGGAACTTATCGGGATGAATTTGTTCTCGAGATGTGCGCTTTTGGAAATAATGCACCCGTTGAAATCATGCACTAGCAGACAATCTCCATCAATTGGAATTCTCTGACTGTCCTCGAACATAGCAATTTGTTCTTATCTTCTTTTGACCTTAATTTTGAACTTGATTTTCCCCCTTTCTCTCTTTAGATGCTAAATCATATGGTATCTGGGGGTTCTGAGTTCTTAATCAATGATTTTCTTTACATTTTCGTAGTTTTAAAGTGTGTATTATATCAAAACATTGAGTAAGAACCCATCGAGCTTCAGAATTTTCTTGGTTTTTACTCCATGAATGAAACTCTTGATCTTTTGTAATATCCCATTAGCACTTTCATTTCTAATTTGCAGGACTACGTGCCCACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGAAACACTGTCAACTTAGGATTATGGGATACTGCTGGTAACAACATGATGAGAGTTCTAGTTTCTCCACCCACCCAATAACCAAGTTCATCAAATTTTTAATGCATGGAAGGGATTTAAATTTTTGTTTTGAACAGGTCAAGAGGATTACAATAGATTAAGACCACTGAGTTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCCAGCTATGAAAATGTTGCTAAGAAGGTAGCACGTTATGGATGAAGTCAATTGTTAGCCTAATTAGCTGGATATGCATTGTTTATGCAAAAATTATGCCTTTGCTGATGAGATTTTTTGCATTTTCCCACAGTGGATTCCTGAGTTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGAACTAAACTTGGTAAGGATTATTTATTCATTTTTGAAGTTTAGTATTCATGTGAGATCCCACATCGGTTGGGGAGAACCAAGCATTCTTTACAAGAGTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAGAGGACAATGTTTGCTAATGATGAGCTTGAACTGTTACAATTTAATTTAGCGATTGAGTAGAGGGATATATTTGGATGCGAAGAACATGGGCTTGGGCTGTTACACATCCATCATAGATGGCTTTTTTTTGCACCGAGTGGAATGTGTGCATCCATACACAAGTTCTTTGTATCCAAAGAATTTTTTCTCAAGTCGCTGAGACTTTATTTCATGATTGTACATCTGCCCAATGTTTCCATTATTTTTGTGTTGTCCATAAGTTTTTTTTTTAAGCATAACTTAGTGATTAAGATATTTCTACTTCTCTCAAGAAGTCAAGGTTTAAATCTCTCGGCTCTACTTCTGATGCGATATTTTGATAGGAAAATGGGAATAACGGTCTATGATTTTGTTCTTCTCGCGTGAGGATATTTCTCGAATTTTGAAAACAAGAACAATTCTCACTGTAGTTTCGTTCTCAGATCTTCGGGATGACAAGCAATTCTTTGTAGACCACCCGGGTGCGGTGCCAATTTCTACTGTTCAGGTAAATAACTTGATATCTACCATTAGAAATCTTATTCTTTTCTTGCTTTTTAGAACCCCTTTTGACGGTTGCAATCTTACTTGGTTTAACTCTATTGGTGACCTTTTTTTCGTCCGTGGGACATAGACTATTTTGGGAAAGTAGCTTGATTGGTTCGGTGGTGAATCGTTAATTTTTCTGTTATTGAATGTAGGGAGAGGAGTTGACAAAAACAATTGGAGCCCCGGCATACATCGAATGTAGTTCAAAAACTCAGCAGGCATGACATTCATTCCGTGTTATTCGTTTGTGTGCATATTTTGTGAAGGAGTTGGTTTGATGGTTTGTTTGTTGCAGAATGTGAAAGCAGTGTTTGATGCAGCCATTAAAGTGGTGCTCCAGCCGCCCAAGTCAAAGAAGAAGAAGAAGAAGTCACAGAGTGTCTGTTCCATCTTATGATCGAAGAAGAAGAAGAACCGAACCGAACCGACGACACTTCATAATGTACTCGCCTTTTTCTCAGCATATCTTTAATCCATGTCATTCCAAGGAAGCAGCGGCGGCGAATGATGGATCGTATCGTACGTATCGTATACGGCCCCAGGCTGACATTCCAAGATGCAAATACAACATATTTTGCAATCTGTTTGTTAGTAATGACCAACATTGCTAACCCCAATTTGTCTGTTTGAATTGTTCATGTATTCATGAGATACCTAAAAGAACTGCTCCCTGGGCATGAACATGCTTTGGTACTTAGTAACATATATTCTCTAATTCCATTCACATCCTCATATTTATGACTT

mRNA sequence

AAAAGGGAAAGGGGGTATGTGTGGTAGAAGAGGAGGCGCTATAGGTGGCAGAAGATCTGGTGCTTCGAGATGAGTGCGTCCAGGTTTATAAAGTGCGTTACGGTGGGCGATGGTGCTGTGGGTAAAACCTGTATGTTGATTTCTTATACGAGTAACACCTTTCCCACGGACTACGTGCCCACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGAAACACTGTCAACTTAGGATTATGGGATACTGCTGGTCAAGAGGATTACAATAGATTAAGACCACTGAGTTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCCAGCTATGAAAATGTTGCTAAGAAGTGGATTCCTGAGTTGAGACATTATGCACCTGATCTTCGGGATGACAAGCAATTCTTTGTAGACCACCCGGGTGCGGTGCCAATTTCTACTGTTCAGAATGTGAAAGCAGTGTTTGATGCAGCCATTAAAGTGGTGCTCCAGCCGCCCAAGTCAAAGAAGAAGAAGAAGAAGTCACAGAGTGTCTGTTCCATCTTATGATCGAAGAAGAAGAAGAACCGAACCGAACCGACGACACTTCATAATGTACTCGCCTTTTTCTCAGCATATCTTTAATCCATGTCATTCCAAGGAAGCAGCGGCGGCGAATGATGGATCGTATCGTACGTATCGTATACGGCCCCAGGCTGACATTCCAAGATGCAAATACAACATATTTTGCAATCTGTTTGTTAGTAATGACCAACATTGCTAACCCCAATTTGTCTGTTTGAATTGTTCATGTATTCATGAGATACCTAAAAGAACTGCTCCCTGGGCATGAACATGCTTTGGTACTTAGTAACATATATTCTCTAATTCCATTCACATCCTCATATTTATGACTT

Coding sequence (CDS)

ATGAGTGCGTCCAGGTTTATAAAGTGCGTTACGGTGGGCGATGGTGCTGTGGGTAAAACCTGTATGTTGATTTCTTATACGAGTAACACCTTTCCCACGGACTACGTGCCCACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGAAACACTGTCAACTTAGGATTATGGGATACTGCTGGTCAAGAGGATTACAATAGATTAAGACCACTGAGTTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCCAGCTATGAAAATGTTGCTAAGAAGTGGATTCCTGAGTTGAGACATTATGCACCTGATCTTCGGGATGACAAGCAATTCTTTGTAGACCACCCGGGTGCGGTGCCAATTTCTACTGTTCAGAATGTGAAAGCAGTGTTTGATGCAGCCATTAAAGTGGTGCTCCAGCCGCCCAAGTCAAAGAAGAAGAAGAAGAAGTCACAGAGTGTCTGTTCCATCTTATGA

Protein sequence

MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPDLRDDKQFFVDHPGAVPISTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSIL

Homology

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BLAST of Cp4.1LG07g03590 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79
Identity = 154/197 (78.17%), Postives = 160/197 (81.22%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFFVDHPGAVPIST                       QN+KAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy Swiss-Prot
Match: Q6ZHA3 (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC6 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.5e-78
Identity = 152/197 (77.16%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 165
           DLRDDKQFFVDHPGAVPI+T Q                      NVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 9.6e-78
Identity = 151/197 (76.65%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFF+DHPGAVPI+T                       QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy Swiss-Prot
Match: Q35638 (Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 9.6e-78
Identity = 151/197 (76.65%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFFVDHPGAVPI+T                       QNVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-77
Identity = 151/198 (76.26%), Postives = 160/198 (80.81%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFF +HPGAVPIST                       QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. NCBI nr
Match: KAG7029448.1 (Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 320 bits (819), Expect = 9.09e-110
Identity = 162/175 (92.57%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSIL 164
           DLRDDKQFFVDHPGAVPI+TVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCS+L
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL 175

[Close]

BLAST of Cp4.1LG07g03590 vs. NCBI nr
Match: XP_022951334.1 (rac-like GTP-binding protein 5 [Cucurbita moschata] >XP_023002505.1 rac-like GTP-binding protein 5 [Cucurbita maxima] >XP_023538238.1 rac-like GTP-binding protein 5 [Cucurbita pepo subsp. pepo] >KAG6585531.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308 bits (790), Expect = 5.15e-105
Identity = 164/197 (83.25%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPISTVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. NCBI nr
Match: XP_022961886.1 (rac-like GTP-binding protein RHO1 [Cucurbita moschata] >XP_022997632.1 rac-like GTP-binding protein RHO1 [Cucurbita maxima] >XP_023545925.1 rac-like GTP-binding protein RHO1 [Cucurbita pepo subsp. pepo] >KAG6598511.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307 bits (786), Expect = 2.10e-104
Identity = 162/197 (82.23%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPI+TVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. NCBI nr
Match: XP_004143001.1 (rac-like GTP-binding protein 5 [Cucumis sativus] >XP_008445333.1 PREDICTED: rac-like GTP-binding protein 5 [Cucumis melo] >XP_038886218.1 rac-like GTP-binding protein 5 [Benincasa hispida] >KGN62254.1 hypothetical protein Csa_018754 [Cucumis sativus])

HSP 1 Score: 304 bits (778), Expect = 3.47e-103
Identity = 161/197 (81.73%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPISTVQ                      NVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELRKVIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. NCBI nr
Match: XP_030523272.1 (rac-like GTP-binding protein ARAC3 isoform X2 [Rhodamnia argentea])

HSP 1 Score: 302 bits (774), Expect = 6.83e-103
Identity = 154/176 (87.50%), Postives = 159/176 (90.34%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQNVKAVFDAAIKVVLQPPKSKKKKK-KSQSVCSIL 164
           DLRDDKQFF+DHPGAVPI+T QNVKAVFDAAIKVVLQPPK +KKKK KS   CSIL
Sbjct: 121 DLRDDKQFFIDHPGAVPITTSQNVKAVFDAAIKVVLQPPKQRKKKKRKSHKACSIL 176

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy TrEMBL
Match: A0A6J1KP50 (rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111496326 PE=3 SV=1)

HSP 1 Score: 308 bits (790), Expect = 2.49e-105
Identity = 164/197 (83.25%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPISTVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy TrEMBL
Match: A0A6J1GID5 (rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454197 PE=3 SV=1)

HSP 1 Score: 308 bits (790), Expect = 2.49e-105
Identity = 164/197 (83.25%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPISTVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy TrEMBL
Match: A0A6J1K5N0 (rac-like GTP-binding protein RHO1 OS=Cucurbita maxima OX=3661 GN=LOC111492507 PE=3 SV=1)

HSP 1 Score: 307 bits (786), Expect = 1.02e-104
Identity = 162/197 (82.23%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPI+TVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy TrEMBL
Match: A0A6J1HBK6 (rac-like GTP-binding protein RHO1 OS=Cucurbita moschata OX=3662 GN=LOC111462525 PE=3 SV=1)

HSP 1 Score: 307 bits (786), Expect = 1.02e-104
Identity = 162/197 (82.23%), Postives = 164/197 (83.25%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPI+TVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. ExPASy TrEMBL
Match: A0A0A0LMJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345950 PE=3 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.68e-103
Identity = 161/197 (81.73%), Postives = 163/197 (82.74%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 164
           DLRDDKQFFVDHPGAVPISTVQ                      NVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELRKVIGAPAYIECSSKTQQNVKGVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 )

HSP 1 Score: 290.4 bits (742), Expect = 8.9e-79
Identity = 151/198 (76.26%), Postives = 160/198 (80.81%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFF +HPGAVPIST                       QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 )

HSP 1 Score: 290.4 bits (742), Expect = 8.9e-79
Identity = 151/198 (76.26%), Postives = 160/198 (80.81%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFF +HPGAVPIST                       QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 )

HSP 1 Score: 290.4 bits (742), Expect = 8.9e-79
Identity = 151/198 (76.26%), Postives = 160/198 (80.81%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+VDGNT+NLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVF+LAFSL+SKASYENV+KKW+PELRHYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTV----------------------QNVKAVFDAAIKVVLQP 165
           DLRDDKQFF +HPGAVPIST                       QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-78
Identity = 149/197 (75.63%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 165
           DLRDDKQFF+DHPGAVPI+T Q                      NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG07g03590 vs. TAIR 10
Match: AT4G35950.1 (RAC-like 6 )

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-78
Identity = 150/197 (76.14%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAP----------- 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAP           
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPISTVQ----------------------NVKAVFDAAIKVVLQP 165
           DLRDDKQFF+DHPGAVPI+TVQ                      NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g03590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EP31	3.0e-79	78.17	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]
Q6ZHA3	2.5e-78	77.16	Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC6 ...	[more]
Q39435	9.6e-78	76.65	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
Q35638	9.6e-78	76.65	Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1	[more]
Q38912	1.3e-77	76.26	Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1...	[more]

BLAST of Cp4.1LG07g03590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029448.1	9.09e-110	92.57	Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022951334.1	5.15e-105	83.25	rac-like GTP-binding protein 5 [Cucurbita moschata] >XP_023002505.1 rac-like GTP...	[more]
XP_022961886.1	2.10e-104	82.23	rac-like GTP-binding protein RHO1 [Cucurbita moschata] >XP_022997632.1 rac-like ...	[more]
XP_004143001.1	3.47e-103	81.73	rac-like GTP-binding protein 5 [Cucumis sativus] >XP_008445333.1 PREDICTED: rac-...	[more]
XP_030523272.1	6.83e-103	87.50	rac-like GTP-binding protein ARAC3 isoform X2 [Rhodamnia argentea]	[more]

BLAST of Cp4.1LG07g03590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP50	2.49e-105	83.25	rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111496326 PE=3 ...	[more]
A0A6J1GID5	2.49e-105	83.25	rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454197 PE=...	[more]
A0A6J1K5N0	1.02e-104	82.23	rac-like GTP-binding protein RHO1 OS=Cucurbita maxima OX=3661 GN=LOC111492507 PE...	[more]
A0A6J1HBK6	1.02e-104	82.23	rac-like GTP-binding protein RHO1 OS=Cucurbita moschata OX=3662 GN=LOC111462525 ...	[more]
A0A0A0LMJ2	1.68e-103	81.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345950 PE=3 SV=1	[more]

BLAST of Cp4.1LG07g03590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35020.1	8.9e-79	76.26	RAC-like 3	[more]
AT4G35020.2	8.9e-79	76.26	RAC-like 3	[more]
AT4G35020.3	8.9e-79	76.26	RAC-like 3	[more]
AT3G51300.1	1.2e-78	75.63	RHO-related protein from plants 1	[more]
AT4G35950.1	2.0e-78	76.14	RAC-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 7..28 score: 44.74 coord: 30..46 score: 32.14 coord: 47..69 score: 49.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..147 e-value: 1.2E-11 score: 35.6
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..147 e-value: 5.0E-9 score: 14.4
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 1..131 coord: 129..164
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..164 score: 15.719429
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..164 score: 17.438324
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..147 e-value: 9.9E-73 score: 257.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..109 e-value: 6.5E-36 score: 123.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..164 score: 10.520994
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..164 e-value: 6.0E-48 score: 164.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..114
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..109 e-value: 9.9E-26 score: 88.4
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 129..164
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 1..131

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g03590.1	Cp4.1LG07g03590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding