Cp4.1LG07g03000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g03000
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionStress induced protein
LocationCp4.1LG07: 1997774 .. 1998247 (+)
RNA-Seq ExpressionCp4.1LG07g03000
SyntenyCp4.1LG07g03000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCGTCCTGTGGAGGTTTCTTCGGATTCGGATCGAGGTTGTCTCGGAGCAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCAGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA

mRNA sequence

ATGGCGTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCGTCCTGTGGAGGTTTCTTCGGATTCGGATCGAGGTTGTCTCGGAGCAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCAGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA

Coding sequence (CDS)

ATGGCGTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCGTCCTGTGGAGGTTTCTTCGGATTCGGATCGAGGTTGTCTCGGAGCAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCAGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA

Protein sequence

MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
Homology
BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match: XP_023537514.1 (uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (795), Expect = 1.67e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0

Query: 1   MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYV 60
           MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYV
Sbjct: 1   MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYV 60

Query: 61  SLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 120
           SLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL
Sbjct: 61  SLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 120

Query: 121 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
Sbjct: 121 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157

BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match: KAG7020402.1 (hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 290 bits (743), Expect = 1.57e-98
Identity = 149/156 (95.51%), Postives = 152/156 (97.44%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
           +SSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSS GGFFGFGSRLSR+SSVRCRYVS
Sbjct: 6   SSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRYVS 65

Query: 62  LQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 121
           LQT QNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN
Sbjct: 66  LQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 125

Query: 122 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM RSEI
Sbjct: 126 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 160

BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match: XP_023002532.1 (uncharacterized protein LOC111496346 [Cucurbita maxima])

HSP 1 Score: 283 bits (725), Expect = 8.74e-96
Identity = 147/157 (93.63%), Postives = 150/157 (95.54%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
           +SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFF FGS LSRSSSVRCRYVS
Sbjct: 4   SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFEFGSWLSRSSSVRCRYVS 63

Query: 62  LQTQ-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 121
           LQ Q QNDEEVNQSWMMKKVKRFEEI++AMARSKWRSFINGIVNKRRSVRFQYDPRSYAL
Sbjct: 64  LQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 123

Query: 122 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           NFDHGIGEDG GGGRHGYSPPSE PMGLGIRMNRSEI
Sbjct: 124 NFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160

BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match: KAG6585486.1 (hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280 bits (717), Expect = 8.03e-94
Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
           +SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFFGFGSRLSR+SSVRCRYVS
Sbjct: 8   SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRYVS 67

Query: 62  LQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 121
           LQT QNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN
Sbjct: 68  LQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 127

Query: 122 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRS 155
           FDHGIGEDGGGGGRHGYSPPSEPPMG  + ++ +
Sbjct: 128 FDHGIGEDGGGGGRHGYSPPSEPPMGNELYLSNA 161

BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match: XP_022131993.1 (uncharacterized protein LOC111004972 [Momordica charantia])

HSP 1 Score: 201 bits (511), Expect = 2.95e-63
Identity = 107/158 (67.72%), Postives = 129/158 (81.65%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVS-YSSCGGFFGFGSRLSRSSS-VRCRY 61
           +SS+SSS+IDET R +     RIEE+ D EVGVS YSSCG FFGFGSR +RSS  VRCRY
Sbjct: 5   SSSTSSSSIDETLRTD-----RIEEDDDREVGVSSYSSCGCFFGFGSRQARSSDGVRCRY 64

Query: 62  VSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYA 121
           + LQ   ++++V QSWMMKKVKRF+EI+KA+A  KWRSFI+GI++K+RSVRFQYDPRSYA
Sbjct: 65  LPLQP--HEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPRSYA 124

Query: 122 LNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           LNFD G GEDGGG GRHG+  PS  P+GLGI MNRS++
Sbjct: 125 LNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155

BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match: A0A6J1KJS5 (uncharacterized protein LOC111496346 OS=Cucurbita maxima OX=3661 GN=LOC111496346 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 4.23e-96
Identity = 147/157 (93.63%), Postives = 150/157 (95.54%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
           +SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFF FGS LSRSSSVRCRYVS
Sbjct: 4   SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFEFGSWLSRSSSVRCRYVS 63

Query: 62  LQTQ-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 121
           LQ Q QNDEEVNQSWMMKKVKRFEEI++AMARSKWRSFINGIVNKRRSVRFQYDPRSYAL
Sbjct: 64  LQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 123

Query: 122 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           NFDHGIGEDG GGGRHGYSPPSE PMGLGIRMNRSEI
Sbjct: 124 NFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160

BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match: A0A6J1BV09 (uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004972 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 1.43e-63
Identity = 107/158 (67.72%), Postives = 129/158 (81.65%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVS-YSSCGGFFGFGSRLSRSSS-VRCRY 61
           +SS+SSS+IDET R +     RIEE+ D EVGVS YSSCG FFGFGSR +RSS  VRCRY
Sbjct: 5   SSSTSSSSIDETLRTD-----RIEEDDDREVGVSSYSSCGCFFGFGSRQARSSDGVRCRY 64

Query: 62  VSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYA 121
           + LQ   ++++V QSWMMKKVKRF+EI+KA+A  KWRSFI+GI++K+RSVRFQYDPRSYA
Sbjct: 65  LPLQP--HEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPRSYA 124

Query: 122 LNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           LNFD G GEDGGG GRHG+  PS  P+GLGI MNRS++
Sbjct: 125 LNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155

BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match: A0A6J1K5B0 (uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 4.18e-59
Identity = 104/149 (69.80%), Postives = 118/149 (79.19%), Query Frame = 0

Query: 5   SSSSAIDETFRLEE-RGSNRIEEESDL-----EVGVSYSSCGGFFGFGSRLSRSSSVRCR 64
           SS++  DE  R EE R  +RIEE +D      EVGVSYSSCG FFGFGSRLSRSSSVRCR
Sbjct: 3   SSATIEDEISRSEEIRAPDRIEEGNDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCR 62

Query: 65  YVSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSY 124
           Y+ L+    +EEV QSWMMKKVKRF++I+KAMA  KWRSFINGIVNKRRSVRFQYDPRSY
Sbjct: 63  YLLLR---ENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSY 122

Query: 125 ALNFDHGIGEDGGGGGRHGYSPPSEPPMG 147
           ALNFD G+GE+ GGGGRHG+  P   P+G
Sbjct: 123 ALNFDEGMGEEEGGGGRHGFRQPFASPIG 148

BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match: A0A5A7VG87 (Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002220 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 4.05e-48
Identity = 101/161 (62.73%), Postives = 115/161 (71.43%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDL---EVG-VSYSSCGGFFGFGSRLSRSSSVRC 61
           +SSSSSSAID T R E+   +RIEE  DL   EVG  SYSSCG FFGFGSRLSR   VR 
Sbjct: 6   SSSSSSSAIDGTLRSED---DRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSR---VRG 65

Query: 62  RYVSLQTQQNDEEVNQ-SWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPR 121
            Y+ LQ+ +  EEV Q SWMM+KVKR  EI+KAMA  KWRS INGI+NKRRSVRFQYDPR
Sbjct: 66  GYLPLQSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPR 125

Query: 122 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           SYALNFD G+ E+G           S  P+GLGI MNR++I
Sbjct: 126 SYALNFDEGMEEEG---------RRSLQPIGLGIGMNRNQI 151

BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match: A0A1S3BC68 (uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 4.05e-48
Identity = 101/161 (62.73%), Postives = 115/161 (71.43%), Query Frame = 0

Query: 2   ASSSSSSAIDETFRLEERGSNRIEEESDL---EVG-VSYSSCGGFFGFGSRLSRSSSVRC 61
           +SSSSSSAID T R E+   +RIEE  DL   EVG  SYSSCG FFGFGSRLSR   VR 
Sbjct: 6   SSSSSSSAIDGTLRSED---DRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSR---VRG 65

Query: 62  RYVSLQTQQNDEEVNQ-SWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPR 121
            Y+ LQ+ +  EEV Q SWMM+KVKR  EI+KAMA  KWRS INGI+NKRRSVRFQYDPR
Sbjct: 66  GYLPLQSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPR 125

Query: 122 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
           SYALNFD G+ E+G           S  P+GLGI MNR++I
Sbjct: 126 SYALNFDEGMEEEG---------RRSLQPIGLGIGMNRNQI 151

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023537514.11.67e-106100.00uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo][more]
KAG7020402.11.57e-9895.51hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023002532.18.74e-9693.63uncharacterized protein LOC111496346 [Cucurbita maxima][more]
KAG6585486.18.03e-9491.56hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022131993.12.95e-6367.72uncharacterized protein LOC111004972 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1KJS54.23e-9693.63uncharacterized protein LOC111496346 OS=Cucurbita maxima OX=3661 GN=LOC111496346... [more]
A0A6J1BV091.43e-6367.72uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J1K5B04.18e-5969.80uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425... [more]
A0A5A7VG874.05e-4862.73Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8... [more]
A0A1S3BC684.05e-4862.73uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..157
NoneNo IPR availablePANTHERPTHR33168STRESS INDUCED PROTEIN-RELATEDcoord: 27..130
NoneNo IPR availablePANTHERPTHR33168:SF46NHL DOMAIN PROTEINcoord: 27..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g03000.1Cp4.1LG07g03000.1mRNA