Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCGTCCTGTGGAGGTTTCTTCGGATTCGGATCGAGGTTGTCTCGGAGCAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCAGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA
mRNA sequence
ATGGCGTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCGTCCTGTGGAGGTTTCTTCGGATTCGGATCGAGGTTGTCTCGGAGCAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCAGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA
Coding sequence (CDS)
ATGGCGTCTTCTTCTTCTTCTTCCGCCATTGATGAAACCTTTCGGTTGGAGGAGAGAGGATCTAATCGGATCGAGGAGGAATCGGATCTGGAAGTCGGAGTTTCGTATTCGTCCTGTGGAGGTTTCTTCGGATTCGGATCGAGGTTGTCTCGGAGCAGTAGTGTTCGATGCCGATATGTATCGCTGCAAACGCAGCAGAACGACGAGGAAGTGAATCAGAGTTGGATGATGAAGAAGGTGAAGAGGTTCGAGGAGATTGTAAAAGCTATGGCTAGGTCGAAGTGGAGAAGCTTCATTAACGGAATAGTTAACAAGAGACGCAGTGTGAGGTTTCAGTATGATCCGAGGAGTTATGCGCTGAACTTTGACCACGGGATCGGAGAAGATGGCGGCGGAGGTGGCCGCCATGGTTACAGTCCGCCGTCTGAACCGCCGATGGGATTGGGGATTCGGATGAATAGAAGCGAGATATGA
Protein sequence
MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
Homology
BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match:
XP_023537514.1 (uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 310 bits (795), Expect = 1.67e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
Query: 1 MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYV 60
MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYV
Sbjct: 1 MASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYV 60
Query: 61 SLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 120
SLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL
Sbjct: 61 SLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 120
Query: 121 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI
Sbjct: 121 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match:
KAG7020402.1 (hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 290 bits (743), Expect = 1.57e-98
Identity = 149/156 (95.51%), Postives = 152/156 (97.44%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
+SSSSSSAIDET RLEERGSNRIEEESDLEVGVSYSS GGFFGFGSRLSR+SSVRCRYVS
Sbjct: 6 SSSSSSSAIDETIRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRYVS 65
Query: 62 LQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 121
LQT QNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN
Sbjct: 66 LQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 125
Query: 122 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM RSEI
Sbjct: 126 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRM-RSEI 160
BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match:
XP_023002532.1 (uncharacterized protein LOC111496346 [Cucurbita maxima])
HSP 1 Score: 283 bits (725), Expect = 8.74e-96
Identity = 147/157 (93.63%), Postives = 150/157 (95.54%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
+SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFF FGS LSRSSSVRCRYVS
Sbjct: 4 SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFEFGSWLSRSSSVRCRYVS 63
Query: 62 LQTQ-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 121
LQ Q QNDEEVNQSWMMKKVKRFEEI++AMARSKWRSFINGIVNKRRSVRFQYDPRSYAL
Sbjct: 64 LQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 123
Query: 122 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
NFDHGIGEDG GGGRHGYSPPSE PMGLGIRMNRSEI
Sbjct: 124 NFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160
BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match:
KAG6585486.1 (hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 280 bits (717), Expect = 8.03e-94
Identity = 141/154 (91.56%), Postives = 148/154 (96.10%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
+SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFFGFGSRLSR+SSVRCRYVS
Sbjct: 8 SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFGFGSRLSRNSSVRCRYVS 67
Query: 62 LQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 121
LQT QNDEEVNQSWMMKKVKRFEEI+KAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN
Sbjct: 68 LQTPQNDEEVNQSWMMKKVKRFEEIIKAMARSKWRSFINGIVNKRRSVRFQYDPRSYALN 127
Query: 122 FDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRS 155
FDHGIGEDGGGGGRHGYSPPSEPPMG + ++ +
Sbjct: 128 FDHGIGEDGGGGGRHGYSPPSEPPMGNELYLSNA 161
BLAST of Cp4.1LG07g03000 vs. NCBI nr
Match:
XP_022131993.1 (uncharacterized protein LOC111004972 [Momordica charantia])
HSP 1 Score: 201 bits (511), Expect = 2.95e-63
Identity = 107/158 (67.72%), Postives = 129/158 (81.65%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVS-YSSCGGFFGFGSRLSRSSS-VRCRY 61
+SS+SSS+IDET R + RIEE+ D EVGVS YSSCG FFGFGSR +RSS VRCRY
Sbjct: 5 SSSTSSSSIDETLRTD-----RIEEDDDREVGVSSYSSCGCFFGFGSRQARSSDGVRCRY 64
Query: 62 VSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYA 121
+ LQ ++++V QSWMMKKVKRF+EI+KA+A KWRSFI+GI++K+RSVRFQYDPRSYA
Sbjct: 65 LPLQP--HEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPRSYA 124
Query: 122 LNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
LNFD G GEDGGG GRHG+ PS P+GLGI MNRS++
Sbjct: 125 LNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155
BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match:
A0A6J1KJS5 (uncharacterized protein LOC111496346 OS=Cucurbita maxima OX=3661 GN=LOC111496346 PE=4 SV=1)
HSP 1 Score: 283 bits (725), Expect = 4.23e-96
Identity = 147/157 (93.63%), Postives = 150/157 (95.54%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSCGGFFGFGSRLSRSSSVRCRYVS 61
+SSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSS GGFF FGS LSRSSSVRCRYVS
Sbjct: 4 SSSSSSSAIDETFRLEERGSNRIEEESDLEVGVSYSSSGGFFEFGSWLSRSSSVRCRYVS 63
Query: 62 LQTQ-QNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 121
LQ Q QNDEEVNQSWMMKKVKRFEEI++AMARSKWRSFINGIVNKRRSVRFQYDPRSYAL
Sbjct: 64 LQAQRQNDEEVNQSWMMKKVKRFEEIIQAMARSKWRSFINGIVNKRRSVRFQYDPRSYAL 123
Query: 122 NFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
NFDHGIGEDG GGGRHGYSPPSE PMGLGIRMNRSEI
Sbjct: 124 NFDHGIGEDGSGGGRHGYSPPSESPMGLGIRMNRSEI 160
BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match:
A0A6J1BV09 (uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004972 PE=4 SV=1)
HSP 1 Score: 201 bits (511), Expect = 1.43e-63
Identity = 107/158 (67.72%), Postives = 129/158 (81.65%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDLEVGVS-YSSCGGFFGFGSRLSRSSS-VRCRY 61
+SS+SSS+IDET R + RIEE+ D EVGVS YSSCG FFGFGSR +RSS VRCRY
Sbjct: 5 SSSTSSSSIDETLRTD-----RIEEDDDREVGVSSYSSCGCFFGFGSRQARSSDGVRCRY 64
Query: 62 VSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSYA 121
+ LQ ++++V QSWMMKKVKRF+EI+KA+A KWRSFI+GI++K+RSVRFQYDPRSYA
Sbjct: 65 LPLQP--HEDQVKQSWMMKKVKRFKEIIKAVAGRKWRSFISGIISKKRSVRFQYDPRSYA 124
Query: 122 LNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
LNFD G GEDGGG GRHG+ PS P+GLGI MNRS++
Sbjct: 125 LNFDEGSGEDGGGSGRHGFRAPSATPIGLGIGMNRSQV 155
BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match:
A0A6J1K5B0 (uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425 PE=4 SV=1)
HSP 1 Score: 189 bits (481), Expect = 4.18e-59
Identity = 104/149 (69.80%), Postives = 118/149 (79.19%), Query Frame = 0
Query: 5 SSSSAIDETFRLEE-RGSNRIEEESDL-----EVGVSYSSCGGFFGFGSRLSRSSSVRCR 64
SS++ DE R EE R +RIEE +D EVGVSYSSCG FFGFGSRLSRSSSVRCR
Sbjct: 3 SSATIEDEISRSEEIRAPDRIEEGNDRDLDLDEVGVSYSSCGCFFGFGSRLSRSSSVRCR 62
Query: 65 YVSLQTQQNDEEVNQSWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPRSY 124
Y+ L+ +EEV QSWMMKKVKRF++I+KAMA KWRSFINGIVNKRRSVRFQYDPRSY
Sbjct: 63 YLLLR---ENEEVKQSWMMKKVKRFKDIIKAMAGRKWRSFINGIVNKRRSVRFQYDPRSY 122
Query: 125 ALNFDHGIGEDGGGGGRHGYSPPSEPPMG 147
ALNFD G+GE+ GGGGRHG+ P P+G
Sbjct: 123 ALNFDEGMGEEEGGGGRHGFRQPFASPIG 148
BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match:
A0A5A7VG87 (Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002220 PE=4 SV=1)
HSP 1 Score: 162 bits (409), Expect = 4.05e-48
Identity = 101/161 (62.73%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDL---EVG-VSYSSCGGFFGFGSRLSRSSSVRC 61
+SSSSSSAID T R E+ +RIEE DL EVG SYSSCG FFGFGSRLSR VR
Sbjct: 6 SSSSSSSAIDGTLRSED---DRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSR---VRG 65
Query: 62 RYVSLQTQQNDEEVNQ-SWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPR 121
Y+ LQ+ + EEV Q SWMM+KVKR EI+KAMA KWRS INGI+NKRRSVRFQYDPR
Sbjct: 66 GYLPLQSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPR 125
Query: 122 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
SYALNFD G+ E+G S P+GLGI MNR++I
Sbjct: 126 SYALNFDEGMEEEG---------RRSLQPIGLGIGMNRNQI 151
BLAST of Cp4.1LG07g03000 vs. ExPASy TrEMBL
Match:
A0A1S3BC68 (uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=4 SV=1)
HSP 1 Score: 162 bits (409), Expect = 4.05e-48
Identity = 101/161 (62.73%), Postives = 115/161 (71.43%), Query Frame = 0
Query: 2 ASSSSSSAIDETFRLEERGSNRIEEESDL---EVG-VSYSSCGGFFGFGSRLSRSSSVRC 61
+SSSSSSAID T R E+ +RIEE DL EVG SYSSCG FFGFGSRLSR VR
Sbjct: 6 SSSSSSSAIDGTLRSED---DRIEEGEDLRDEEVGGFSYSSCGCFFGFGSRLSR---VRG 65
Query: 62 RYVSLQTQQNDEEVNQ-SWMMKKVKRFEEIVKAMARSKWRSFINGIVNKRRSVRFQYDPR 121
Y+ LQ+ + EEV Q SWMM+KVKR EI+KAMA KWRS INGI+NKRRSVRFQYDPR
Sbjct: 66 GYLPLQSNRKSEEVKQQSWMMRKVKRLNEIIKAMAGRKWRSLINGIINKRRSVRFQYDPR 125
Query: 122 SYALNFDHGIGEDGGGGGRHGYSPPSEPPMGLGIRMNRSEI 157
SYALNFD G+ E+G S P+GLGI MNR++I
Sbjct: 126 SYALNFDEGMEEEG---------RRSLQPIGLGIGMNRNQI 151
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023537514.1 | 1.67e-106 | 100.00 | uncharacterized protein LOC111798530 [Cucurbita pepo subsp. pepo] | [more] |
KAG7020402.1 | 1.57e-98 | 95.51 | hypothetical protein SDJN02_17086, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023002532.1 | 8.74e-96 | 93.63 | uncharacterized protein LOC111496346 [Cucurbita maxima] | [more] |
KAG6585486.1 | 8.03e-94 | 91.56 | hypothetical protein SDJN03_18219, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022131993.1 | 2.95e-63 | 67.72 | uncharacterized protein LOC111004972 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1KJS5 | 4.23e-96 | 93.63 | uncharacterized protein LOC111496346 OS=Cucurbita maxima OX=3661 GN=LOC111496346... | [more] |
A0A6J1BV09 | 1.43e-63 | 67.72 | uncharacterized protein LOC111004972 OS=Momordica charantia OX=3673 GN=LOC111004... | [more] |
A0A6J1K5B0 | 4.18e-59 | 69.80 | uncharacterized protein LOC111492425 OS=Cucurbita maxima OX=3661 GN=LOC111492425... | [more] |
A0A5A7VG87 | 4.05e-48 | 62.73 | Stress induced protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold8... | [more] |
A0A1S3BC68 | 4.05e-48 | 62.73 | uncharacterized protein LOC103488331 OS=Cucumis melo OX=3656 GN=LOC103488331 PE=... | [more] |
Match Name | E-value | Identity | Description | |