Cp4.1LG07g02960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g02960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	tRNA (Cytosine(38)-C(5))-methyltransferase
Location	Cp4.1LG07: 1864173 .. 1870200 (-)
RNA-Seq Expression	Cp4.1LG07g02960
Synteny	Cp4.1LG07g02960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGTATGTATATATATATATATCTCAAACAAAGTAGGTTTGAAAACGCGGAGATATAGCATTTTTCCAAATAAAATGTCTCACCATCTACGGGAGCCCGAGCCTGACCATTTAGCGCAGGACGAGCAAAGTTACCAGACGTAAATGGAGAAGGCATTTCCAAAGCAGGAAGACGAACATTGGAGAGTCCTTGAATTCTTCAGCGGCATTGGTGGCATGGTACTGTTTTCGCCTATGTTTCTCTCTGTATCCTTCTCGATCTCAGGCGCATATTCTTACAGAGGCTTTGTTTGCGATTTCAATTATAACAGAGATACTCTCTACTGAGTGCTGGAGTCGATGCGGAAGTAGTACAAGCTTTTGATATCAACGATAAAGCAAACGACGTTTACGAGCATAATTTCGGCGATCGTCCGCATCAGGTACGATAGAATCATCTTCTTCTTATTGCTTTCTACCGTATGAATAAGTATTCGGTGCTTCTCAATGAAAACATTGAAACTAGTTTTCCTTCAAAATCGAATGCAAATTCTCTTCAGTTGTTGTTTAAGTAGATTGAATTTGAGGCTGTTGAATGCTGTAGCCAAGCTTATTTAATTAGTGAGGAACTACCTCCTGGATGCAAATTCTCTTCAGTTGTGGTTTAAGTAGATTGAATTTGAGGCTGTTGAATGTTGTAGCCAAGCCTATTTAATTAGTGAGGAACTACCTCCTGGATACTGATGCACGTATGGTTTGATAAGCTTTCAATTTACAGCTAGTACGAATTCACGATGTAAGCGGACAGTAGATAGGTACATAAACTGTTTTTGTTGGAGTATCTGATTCAAATGACTGGCGGTGTAGACATTCTTTTGAACTGCCAAAGTAAAAGCGATCTACAATCTTCTCAACATCGTCTTTTTCTTATTATTTTTTGTTTCGAGAGCGATTATGTTGCTTGTCCATCGCAGGAGTAAAGTTTTGCTGCTTTTCAATACAGATAACGGAACTATTTTGTTCATTCAGAATTGAGATGCCAATTCTTTTCTATCGAGGAATAAGTAGATTGAATTTGAAGTTATTGAATGTTGAAACATAGCTTATCTATTTCGTTGGAAATTACATACCTCTGACCGATGGACGTCTTTGTTAAGTGATTAGATTGCAATTTGAAGCTCGTATGAACTCTCAACGTAGTGGAGAACAAGGTAGTTATATGACGTATTTTTGTTGGAATCTCTCATTCAAAAGATTAGCGTAGTGAGTTTTTTCTTTCATCGAATAGTCAAACCAAAAGCGTCATGCAATTTAGGAATATGTAACAGCTCATTCATAGCTTCCTTTGCATAGGAGAGTCATTTTTTTCTTAATAGTTATGGTCAAAGCAATCCTACGTGCTTGGTCGAAGACTCGGAAAGCAAAAGAGAGCTACAAGAAAGAGGCAGAACTGGAGTCTAAAAAACGAATCATGGAGAGACCTTGAATTCTGCAGTGTTATTGATGGCATGCTAGCTCGCATTTGAATGAGATTACCCAGTCTGGTTTCCTTAGTCCTTGGATCTGTCATCTAATTTGGAGTCTGGACGTTTAGGATACTAAAGTAATTCTTATATTTTGCATGCATAGCTTCCTATGGATAGGAGTGTCAGCCTTTTCTTTTCGGTTAGTTATGGTGAAAAATAACCTATATGCTTGGTTGAGCTACAGAAAGAAAAGAGCGCTACAGGAAAGACTCAAAACTAGAGCCTAAAAAATGTACCATGGAGAGTCCTTGAATTCTTCAGCAACATCGGTTGCATGGTCGGTCTCATTTGAATTCTCATTTTTCCCAACTATATAGGTCTGGCATACTTTGTCCTTGGATCTGTTATCTTATTTGGAGTTTAGTCGTCTAGGATGCTGAAGAAATTCTTATATTTAATGTCCATATTGGTCATTACACGTTAGACACCTCATTTTGTGTATCATTTTTGTTAGAATTGCACAACAACACACAATACTAGCTAGAGGTTTATACTGCTGACTTTAAGCATGTATAGTAATAGAGAAGACAGAGAATGCAGAAAGTATTGCAGGTATATATACGGTTCAGTTTATTCTAGATATAACCATCTACTATATATATAATTATCTACCATATATATAGCTTTACCGGATATAGTTTTTTACTATATATAATTGTTTACTATAGAGCTATAAATAATCTGCTGACTTCACAAGCAGACTTCATAACCTTTTCCATGGTAAAAGCATGAGCGGAAGATGATGCAAAAATGGATGTTCTCACCTAATCTCTAGAATCAATCACACATTCAAAGGCCAAATAACTATAACTAGCTTTCGATTCTCAGATACAAACAAAAAACGTACTTAAATAAGGAAGATCAAGGAGGGGAAAATGGTATGAAGTTCTACTCCAAAGTGTTTGATGAAACTACAATAAGAAAATGTGGAGCTTTATTTTAAATAGGAATTTATTATTGTAATTTTTTCTGCTAAGCCATTTTTATTTTAGGTCCTTTTGTTTTGGCCATTGTAATTTAGATTCTTATTTTATTTCTTTTAAGTTATTTGTAACATCACACTTGGGGATAAAATACTATGTTAGCNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAGGTTTAAATGATGTGCATGGGGCGTTGGACATTTTTGGAATGATTTTACTGCAAATTGCACTTTGATGATTGAGAGTGAGAGTTCATTGTCGTCTTTGCAATTATTGATTTAGAGTTGCATGCTTAAACGTTCAAGTAGGTTTGATGAACCAGCTTAAATGTCCATTGGAACAGTTGATGTACTGATACTGGATACATTCTTACGTATTTTATACACACACCATGGCTTGGTTTACAATCCTTTCCTTAGAACAACCATTTTATGCTTGTACATCGTGCATGTTATAAATTGGAAAGTGGATAATTGTGCACCATATAATTAGGTCTACAGAAGCATTCCAGCGATGCTCGGGCATTTTCATTCCTCAAAATTCTTGTGAGTTGATGCTACAAACATCAAGGCCACCAGTAATGTTATTCATGGAAAATGTTGTTGGATTTGAGGTATGTTTCTTGATCTTATCTGTGTGCTGGAACTTGTTTGACTGATTCATCATAATACTTTAGATGCTTTCCTCTTTGTTGCAGACATCTGACACACATACAAAAATGGTTGATATATTGGAAAAAGCTGATTTTTCTAGGCAGGAGTTCATTTTAAGCCCAATGCATTTTGGTGTTCCATATTCCAGACCACGATACTTCTGGGTAGCATACTTCTCTCACTTCCTTTTCTCTCCATTCTTACCCTTCTTGTTATTGTTAAACAGTTTCCTTCCCATTTAATTTCACCAATATCACAATTTGATTGATGTTTGAAATTTTTTTGTGGAGTTTTTGATGTCATTAAAAAACATTGAAATGGCCGTGTAGTTTCACCTTCTGTCTTTGATGATTTATACTTTCAACATTACGTAATGGCCGTGTAGGATGCTCCATAAAAGGCATAACAACCCAAGTTCTGTTTAAAGCCACTCGGTTTTTAGGTACAAAATAGTCATAGAAATCCTACATCAATTGGAGAAAGGAACTAAAGCTAGTGAGAACGTTGGGTCTCGAAGCGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGGGAACGGTGCCAGTGAGAACGCTAGGCCTCGAAGGGAGTGGATCTTTAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGAAAATCTCTCCCTAGTAGACGCAGTTTAAAAACCTTGAAGGGAAGTTCGAAAGGAAAAATCCAAAAAAGAGAATATCTGCCGGGGTTGAGCTTTAGCTTTGACTGTTATACATCATCTCTCACAACAAAAGGACTAAGGCATTTTTTTTCAGATTCCTGTGGATGTGACATCATAACTTCATCATGAGTTCTCTCATCAATCTAATTGTATTTCTTTCAAATTCATTTTGCACGTGAAATTATGGCATTGTCATGCAGCTGTACAACATCGAACATATATATTAAAAAAAGAAACCCGATTTACACTTGTGAACTGAAGTTTCATGTCATCATATGGATTTACCTTATTATTTATCTGTGCATTGTGTGTTTCAAGGTAGATATTATCATTCGTTTCTAAATATAATTTTAGATCATTGGCTACTATAAAAAGAGGGCTTTCTTACATAACCTAAGCTGTAGGTTCCAAATTTGAATGACATTCTTCTACTTTTGCAGGCTAAAAGGAGGCCTTTATCCTTTCAAAGGAAATTATACAATAATCAACCTCTTTGGCGTCCCAGTCCATTACTCGAGATTGATGTTGACTTAGAAACCATTAAGAATCGTGGATCAGAAGCGGCTTCTGATAAGTTGCTGCTCTCATGCGAGCCAATACGTAGGTTTCTTGACAAATCCAACCATCAGAGTGTGTTAGTTTTTCTGATTCCAATAGTATTCATAGAGAGGGTGCATTGGAGCATACCAAGGATGCGACGAGCACGACAATGGATCTTTTGATCACTATCTCGTCTCATCTAGTTTGATAGACAGATGGGGCAGTGTTATGGGTATGATGTTGTCCTCTTTGGACTTTCCTTTTCGGACTTCCCCTCAAGGTTTTTAAAACGCATCTGCTAGAGGGAGTTTCCACACTCTTATAAAGAATCCTTCGTTCTTTTTCCCAACCGATGTGGGATCTCACATCTATCATATGATCAGTATTGTCTCATCACCACAACTCACTGCTGACCATGGATTAGATTCTTAAGAGAGAGTTCAGATATCGTATGTCCTGATTCAAGGCGATGCTGTTGTTTTACAAAAAGCTACTACCGATACGTGAAGGGCACCGGCTCACTTTTGGCACCTTTTAAGGTAAAATTTTATCCTTAGCCATGATTTTTTTACTATGTGGTTGGTGGTGCAATAGAGCTAATTTTTCCTGAACCTGGAAATGAAGCATGATCCAAACTTGATGCTGTATGTTAAGTAGTAAACACCAATCGTCTATTGTTATCATATTTAGATGTCATTTTTTGTTTAAAACGCAATGCAGGCGGAAATGGTGGATAAGGCTCATTCTCTGAAAGAGGGGACGCTCAGATATTGTACACCTAGAGAGGTGCATGATGATTTTATATTAAGATAGTTCTTTATTATATCTCATTTTCAAGCTGATGACGTTCATTAATCCGTAGCTTTTTTTAATGATAAATATTAGGTTGCTAACTTGCATCCCTTTCCGGAAGATTTTCAATTTCCACAGCATGTTGGCCTTAGGCAACGGTATGTATCTTCGTTCTTTTAACACAATTTCTTTCGTATACTTTTCACCTCTTATATTAATGTTTGAATTCTTAACTAAACTACAAAAATAGAAACAAAAAGTTCAAAAACTATTTAAAAAAAAAAAATTAAAACTGACATTTCATCTATCCAATTTTATTCTATTAAAATTAAAATGATTCGACATTAAAAACAAGATAAGTAAATGGAGAATAGAATGATTCTAGATGGGATTAAACCGCTTCCTAATCTTGGATCCCAGAAAATATTCATCTTCCTGGCCTTTAATACTATAAAAATTCCAAATTCCTTTTCTGGTTCTTATTTTGAAATAATAAAATAAGTAATTATTCTTGATTTTTTCGTCATTTTTTATTTATTGATTTGTTCTATAAATTTAGTTTGAATTTTAAGAACACTAAAAAAAGAAAAGGTAGAATTTACAAGTTTAATTAAACCAAATAGACATCTGTAGCCGATTAATACCTTGCCCTGCCTTTAAGCAGTTTTGAGATTTTATCGATGATTCTCGCCAACTTTTTCAACTGTTCAAAATTGCCAAATATATAATAGAAAAATGTTTAATATCATATTTTGCCTTGGGTTTTTCTTTGCAGCTATGCATTAAAAGGGAACAGTTTGCGCATAGCCGTTGTTGCTCCCTTACTCAGATACCTCTTTGCGGTGCCATCTTGA

mRNA sequence

ATGTATGCATTTCCAAAGCAGGAAGACGAACATTGGAGAGTCCTTGAATTCTTCAGCGGCATTGGTGGCATGAGATACTCTCTACTGAGTGCTGGAGTCGATGCGGAAGTAGTACAAGCTTTTGATATCAACGATAAAGCAAACGACGTTTACGAGCATAATTTCGGCGATCGTCCGCATCAGCGATGCTCGGGCATTTTCATTCCTCAAAATTCTTGTGAGTTGATGCTACAAACATCAAGGCCACCAGTAATGTTATTCATGGAAAATGTTGTTGGATTTGAGACATCTGACACACATACAAAAATGGTTGATATATTGGAAAAAGCTGATTTTTCTAGGCAGGAGTTCATTTTAAGCCCAATGCATTTTGGTGTTCCATATTCCAGACCACGATACTTCTGGGCTAAAAGGAGGCCTTTATCCTTTCAAAGGAAATTATACAATAATCAACCTCTTTGGCGTCCCAGTCCATTACTCGAGATTGATGTTGACTTAGAAACCATTAAGAATCGTGGATCAGAAGCGGCTTCTGATAAGTTGCTGCTCTCATGCGAGCCAATACGTAGGTTTCTTGACAAATCCAACCATCAGAATATCGTATGTCCTGATTCAAGGCGATGCTGTTGTTTTACAAAAAGCTACTACCGATACGTGAAGGGCACCGGCTCACTTTTGGCACCTTTTAAGGCGGAAATGGTGGATAAGGCTCATTCTCTGAAAGAGGGGACGCTCAGATATTGTACACCTAGAGAGGTTGCTAACTTGCATCCCTTTCCGGAAGATTTTCAATTTCCACAGCATGTTGGCCTTAGGCAACGCTATGCATTAAAAGGGAACAGTTTGCGCATAGCCGTTGTTGCTCCCTTACTCAGATACCTCTTTGCGGTGCCATCTTGA

Coding sequence (CDS)

ATGTATGCATTTCCAAAGCAGGAAGACGAACATTGGAGAGTCCTTGAATTCTTCAGCGGCATTGGTGGCATGAGATACTCTCTACTGAGTGCTGGAGTCGATGCGGAAGTAGTACAAGCTTTTGATATCAACGATAAAGCAAACGACGTTTACGAGCATAATTTCGGCGATCGTCCGCATCAGCGATGCTCGGGCATTTTCATTCCTCAAAATTCTTGTGAGTTGATGCTACAAACATCAAGGCCACCAGTAATGTTATTCATGGAAAATGTTGTTGGATTTGAGACATCTGACACACATACAAAAATGGTTGATATATTGGAAAAAGCTGATTTTTCTAGGCAGGAGTTCATTTTAAGCCCAATGCATTTTGGTGTTCCATATTCCAGACCACGATACTTCTGGGCTAAAAGGAGGCCTTTATCCTTTCAAAGGAAATTATACAATAATCAACCTCTTTGGCGTCCCAGTCCATTACTCGAGATTGATGTTGACTTAGAAACCATTAAGAATCGTGGATCAGAAGCGGCTTCTGATAAGTTGCTGCTCTCATGCGAGCCAATACGTAGGTTTCTTGACAAATCCAACCATCAGAATATCGTATGTCCTGATTCAAGGCGATGCTGTTGTTTTACAAAAAGCTACTACCGATACGTGAAGGGCACCGGCTCACTTTTGGCACCTTTTAAGGCGGAAATGGTGGATAAGGCTCATTCTCTGAAAGAGGGGACGCTCAGATATTGTACACCTAGAGAGGTTGCTAACTTGCATCCCTTTCCGGAAGATTTTCAATTTCCACAGCATGTTGGCCTTAGGCAACGCTATGCATTAAAAGGGAACAGTTTGCGCATAGCCGTTGTTGCTCCCTTACTCAGATACCTCTTTGCGGTGCCATCTTGA

Protein sequence

MYAFPKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRCSGIFIPQNSCELMLQTSRPPVMLFMENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFWAKRRPLSFQRKLYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQNIVCPDSRRCCCFTKSYYRYVKGTGSLLAPFKAEMVDKAHSLKEGTLRYCTPREVANLHPFPEDFQFPQHVGLRQRYALKGNSLRIAVVAPLLRYLFAVPS

Homology

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BLAST of Cp4.1LG07g02960 vs. ExPASy Swiss-Prot
Match: F4JWT7 (tRNA (cytosine(38)-C(5))-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=DNMT2 PE=1 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.9e-85
Identity = 177/372 (47.58%), Postives = 219/372 (58.87%), Query Frame = 0


Query: 8   EDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPH------- 67
           E + W+VLEF+SGIGGMRYSL+++G+ +EVV+AF+IND ANDVY+HNF  RP+       
Sbjct: 11  EKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRPYQGNIQSL 70

Query: 68  ---------------------------QRCSG---IFIPQNSCELMLQTSRPPVMLFMEN 127
                                      Q+ SG    F      EL+  T++PP MLF+EN
Sbjct: 71  TAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVEN 130

Query: 128 VVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYF-WAKRRPLSFQRKLYN 187
           VVGFETSDTH +M+  L K D+  QEFILSP+ FGVPYSRPRYF  AKR+PL F+ +  N
Sbjct: 131 VVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSN 190

Query: 188 NQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNH------------ 247
           N+ LW P PL   D  +E  K +  E   DKLL  C+P+ +FL+ + H            
Sbjct: 191 NKLLWSPDPLYGRDDQVEFGKCQAEEGL-DKLLEFCKPVEKFLELAAHVDGEPSSVDDSE 250

Query: 248 ----------------------------------QNIVCPDSRRCCCFTKSYYRYVKGTG 296
                                              +IV PDS+RCCCFTKSYYRYVKGTG
Sbjct: 251 NGSKDCCGQEGDSVPDSVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKGTG 310

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy Swiss-Prot
Match: O55055 (tRNA (cytosine(38)-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Trdmt1 PE=1 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-34
Identity = 121/392 (30.87%), Postives = 164/392 (41.84%), Query Frame = 0


Query: 10  EHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRCSGIFIP 69
           E  RVLE +SGIGGM ++L  + + A VV A D+N  AN+VY+HNF   PH       I 
Sbjct: 2   EPLRVLELYSGIGGMHHALRESHIPAHVVAAIDVNTVANEVYKHNF---PHTHLLSKTIE 61

Query: 70  QNSCE----------LMLQTSRP-------------------------------PVMLFM 129
             S E          LM    +P                               P  + +
Sbjct: 62  GISLEDFDKLSFNMILMSPPCQPFTRIGLQGDMTDPRTTSFLYILDILPRLQKLPKYILL 121

Query: 130 ENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFWAKR---RPLSFQR 189
           ENV GFE S T   ++  +E   F  QEF+LSP   G+P SR RYF   +    P  FQ 
Sbjct: 122 ENVKGFEVSSTRGLLIQTIEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPFPFQA 181

Query: 190 ---------KLYNNQP------------LWRPSPLL-------------EIDVDLETIKN 249
                    K+   +P            + R  P +              I   LET++ 
Sbjct: 182 PGQILMEFPKIVTVEPQKYAVVEESQPRVQRTGPRICAESSSTQSSGKDTILFKLETVEE 241

Query: 250 RGSEAASDKLLLSCEPIRRFLDKSNHQ----------------NIVCPDSRRCCCFTKSY 295
           R  +   D   LS + ++ FL+  +                  +IV P SRR  CFTK Y
Sbjct: 242 RDRKHQQDS-DLSVQMLKDFLEDGDTDEYLLPPKLLLRYALLLDIVKPTSRRSMCFTKGY 301

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy Swiss-Prot
Match: Q54JH6 (DNA (cytosine-5)-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=dnmA PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 114/359 (31.75%), Postives = 168/359 (46.80%), Query Frame = 0


Query: 10  EHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRC------ 69
           E  RVLEF+SGIGGM Y L  +GVD +V+Q+FDIN  AN  Y++ F +   Q+       
Sbjct: 2   EQLRVLEFYSGIGGMHYGLQESGVDFQVIQSFDINTNANLNYKYTFNEDSSQKSIESYSV 61

Query: 70  -------SGIFIPQNSC------------------------ELMLQTSRPPVMLFMENVV 129
                  +  ++    C                        +++ +   PP  + +ENV 
Sbjct: 62  EELEGFKANAWLMSPPCQPFTRLGLQKDDQDNRTNSFFHLLDVLTKIKDPPTYILIENVF 121

Query: 130 GFE---TSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFWAKRR--PLSFQR-- 189
           GF    +S+T   ++D L K ++S QEF LSP  FG+   R RYF   +R   L+F++  
Sbjct: 122 GFAKKGSSNTRDHLLDTLIKMNYSFQEFHLSPQQFGLANQRLRYFCIAKRNGKLNFKKEQ 181

Query: 190 ----------KLYNN------QPLWRPSPLLE--IDVDLETIKNRGSEAAS--DKLLLSC 249
                     KL NN      Q  +    +L+     D  T      E ++  DK L   
Sbjct: 182 DKHNEKVDENKLNNNSNNNNEQNKYDNLKILDHIPGYDFHTTLEECDEISNYFDKDLTDD 241

Query: 250 E-------PIRRFLDKSNHQNIVCPDSRRCCCFTKSYYRYVKGTGSLLA---PFKAEMVD 295
           E       P    L K    +I   DS+   C TKSY ++++GTGS++     FKA++ D
Sbjct: 242 ELYEKYKVPHNLLLSKGMLFDIKQKDSKTSNCVTKSYGKFIEGTGSIIQMDNNFKADIND 301

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy Swiss-Prot
Match: O14717 (tRNA (cytosine(38)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=TRDMT1 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 113/395 (28.61%), Postives = 166/395 (42.03%), Query Frame = 0


Query: 10  EHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNF-------------- 69
           E  RVLE +SG+GGM ++L  + + A+VV A D+N  AN+VY++NF              
Sbjct: 2   EPLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGIT 61

Query: 70  ---------------------------GDRPHQRCSGIFIPQNSCELMLQTSRPPVMLFM 129
                                      GD    R +      +  +++ +  + P  + +
Sbjct: 62  LEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFL---HILDILPRLQKLPKYILL 121

Query: 130 ENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFWAKR---RPLSFQ- 189
           ENV GFE S T   ++  +E   F  QEF+LSP   G+P SR RYF   +    PL FQ 
Sbjct: 122 ENVKGFEVSSTRDLLIQTIENCGFQYQEFLLSPTSLGIPNSRLRYFLIAKLQSEPLPFQA 181

Query: 190 --------------------RKLYNNQPLWRPSPLLEID------------VDLETIK-- 249
                                 + N        P +  D              LET +  
Sbjct: 182 PGQVLMEFPKIESVHPQKYAMDVENKIQEKNVEPNISFDGSIQCSGKDAILFKLETAEEI 241

Query: 250 NRGSEAASDKLLLSCEPIRRFLDKSNHQN-----------------IVCPDSRRCCCFTK 296
           +R ++  SD   LS + ++ FL+     N                 IV P  RR  CFTK
Sbjct: 242 HRKNQQDSD---LSVKMLKDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTCRRSVCFTK 301

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy Swiss-Prot
Match: Q4G073 (tRNA (cytosine(38)-C(5))-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trdmt1 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 114/391 (29.16%), Postives = 167/391 (42.71%), Query Frame = 0


Query: 10  EHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPH-----QRCS 69
           E  RVLE +SGIGGM ++L  + V A VV A D++  AN+VY+HNF   PH     +   
Sbjct: 2   EPLRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNF---PHTHLLAKTIE 61

Query: 70  GIFIPQ--------------------------------NS----CELMLQTSRPPVMLFM 129
           GI + +                                NS     +++ +  + P  + +
Sbjct: 62  GISLEEFDKLSFNMILMSPPCQPFTRIGLQGDMSDRRTNSFLYILDILPRLQKLPKYILL 121

Query: 130 ENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFWAKR---RPLSFQR 189
           ENV GFE S T   ++  +E   F  QEF+LSP   G+P SR RYF   +    PL FQ 
Sbjct: 122 ENVKGFEVSSTRGLLIQTMEACGFQYQEFLLSPSSLGIPNSRLRYFLIAKLQSEPLCFQA 181

Query: 190 -----KLYNNQPLWRPSPLLEIDVDLETIKNRGSE----------AASDKLL-------- 249
                  + N    +P     ++     ++ R  +          +  D +L        
Sbjct: 182 PGQILMEFPNSGTVQPQEYAVVEEGKLRVRTREPDVCLDSSSTQCSGQDSILFKHETAAD 241

Query: 250 ----------LSCEPIRRFLDKSNHQ----------------NIVCPDSRRCCCFTKSYY 295
                     LS + ++ FL+  +                  +IV P SRR  CFTK Y 
Sbjct: 242 IDRKRQQDSDLSVQMLKGFLEDGDTAQYLLPAKSLLRYALLLDIVKPTSRRSMCFTKGYG 301

[Close]

BLAST of Cp4.1LG07g02960 vs. NCBI nr
Match: XP_022132298.1 (DNA (cytosine-5)-methyltransferase isoform X1 [Momordica charantia])

HSP 1 Score: 441 bits (1134), Expect = 3.35e-152
Identity = 241/378 (63.76%), Postives = 260/378 (68.78%), Query Frame = 0


Query: 5   PKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRC- 64
           P+ + E WRVLEF+SGIGGMRYSLLSAGVDA+VVQAFDINDKANDVYEHNFGDRP+Q   
Sbjct: 6   PQLQGEPWRVLEFYSGIGGMRYSLLSAGVDAKVVQAFDINDKANDVYEHNFGDRPYQGNI 65

Query: 65  ------------SGIFIPQNSC------------------------ELMLQTSRPPVMLF 124
                       + +++    C                        ELMLQTSRPPVMLF
Sbjct: 66  ESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELMLQTSRPPVMLF 125

Query: 125 MENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQRK 184
           MENVVGFETSDTHTKM++ILEKADFSRQEFILSPM FGVPYSRPRYF  AKRRPLSF R 
Sbjct: 126 MENVVGFETSDTHTKMIEILEKADFSRQEFILSPMQFGVPYSRPRYFCLAKRRPLSFHRL 185

Query: 185 LYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQN------- 244
           LYNNQ LW PSPLLE DVD+ETI+N GS+A SDKLLLSCEPI RFLD S+H +       
Sbjct: 186 LYNNQLLWSPSPLLENDVDIETIENHGSQATSDKLLLSCEPICRFLDHSSHHSEFSFSDA 245

Query: 245 ---------------------------------------IVCPDSRRCCCFTKSYYRYVK 298
                                                  IV PDSRRCCCFTKSYYRYVK
Sbjct: 246 SSIQREGALEKTKDTDEQGSFDQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRYVK 305

[Close]

BLAST of Cp4.1LG07g02960 vs. NCBI nr
Match: XP_008445162.1 (PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform X1 [Cucumis melo])

HSP 1 Score: 436 bits (1121), Expect = 3.28e-150
Identity = 235/382 (61.52%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 3   AFPKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQR 62
            FPK +DE WRVLEF+SGIGGMRYSLLSAG+ A+VVQAFDINDKANDVYEHNFGDRP+Q 
Sbjct: 4   VFPKLQDEPWRVLEFYSGIGGMRYSLLSAGIHAKVVQAFDINDKANDVYEHNFGDRPYQG 63

Query: 63  C-------------SGIFIPQNSC------------------------ELMLQTSRPPVM 122
                         + +++    C                        ELMLQ SRPPVM
Sbjct: 64  NIESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMLQASRPPVM 123

Query: 123 LFMENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQ 182
           LFMENVVGFETSDTHTKM++ILEKA FS QEFILSPM FGVPYSRPRYF  AKR+PLSFQ
Sbjct: 124 LFMENVVGFETSDTHTKMIEILEKAGFSTQEFILSPMQFGVPYSRPRYFCLAKRKPLSFQ 183

Query: 183 RKLYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQ------ 242
           ++L+NNQ LW PSPLL+ D DLE+I+  GS+A SDKLLLSCEPI RFLD SNH+      
Sbjct: 184 KQLHNNQLLWSPSPLLDNDADLESIETHGSQATSDKLLLSCEPICRFLDHSNHRELSFYD 243

Query: 243 -----------------------------------------NIVCPDSRRCCCFTKSYYR 299
                                                    +IV PDSRRCCCFTKSYYR
Sbjct: 244 ASSIQSEVALEKNEDPNEQVIESFNQYLVPSGLIDRWGSAMDIVYPDSRRCCCFTKSYYR 303

[Close]

BLAST of Cp4.1LG07g02960 vs. NCBI nr
Match: XP_038884640.1 (tRNA (cytosine(38)-C(5))-methyltransferase 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 435 bits (1119), Expect = 7.08e-150
Identity = 235/378 (62.17%), Postives = 259/378 (68.52%), Query Frame = 0


Query: 5   PKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQ--- 64
           PK ++E WRVLEF+SGIGGMRYSLLSAG+ A+VVQAFDINDKANDVYEHNFGDRP+Q   
Sbjct: 6   PKLQEEPWRVLEFYSGIGGMRYSLLSAGIAAKVVQAFDINDKANDVYEHNFGDRPYQGNI 65

Query: 65  ----------RCSGIFIPQNSC------------------------ELMLQTSRPPVMLF 124
                       + +++    C                        ELMLQ SRPPVMLF
Sbjct: 66  ESLTAADIDSHHAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMLQASRPPVMLF 125

Query: 125 MENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQRK 184
           MENVVGFETSDTHTKM++ILEKA FSRQEFILSPM FGVPYSRPRYF  AKR+PLSFQ++
Sbjct: 126 MENVVGFETSDTHTKMIEILEKAGFSRQEFILSPMQFGVPYSRPRYFCLAKRKPLSFQKQ 185

Query: 185 LYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQN------- 244
           LYN+Q LW PSPLLE D ++E I+N GS+A SDKLLLSCEPI RFLD SNH N       
Sbjct: 186 LYNSQLLWSPSPLLENDANIEIIENHGSQATSDKLLLSCEPICRFLDNSNHHNELSFHDA 245

Query: 245 -----------------------------------------IVCPDSRRCCCFTKSYYRY 296
                                                    IV PDSRRCCCFTKSYYRY
Sbjct: 246 SSIPREVALEKDKDLDEQDLESLNQYVVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRY 305

[Close]

BLAST of Cp4.1LG07g02960 vs. NCBI nr
Match: XP_004138735.1 (tRNA (cytosine(38)-C(5))-methyltransferase 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 429 bits (1103), Expect = 1.78e-147
Identity = 231/382 (60.47%), Postives = 258/382 (67.54%), Query Frame = 0


Query: 3   AFPKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQR 62
            FPK +DE WRVLEF+SGIGGMRYSLLSAG+ A+VVQAFDINDKANDVYEHNFGDRP+Q 
Sbjct: 4   VFPKLQDEPWRVLEFYSGIGGMRYSLLSAGIHAKVVQAFDINDKANDVYEHNFGDRPYQG 63

Query: 63  C-------------SGIFIPQNSC------------------------ELMLQTSRPPVM 122
                         + +++    C                        ELM++ SRPPVM
Sbjct: 64  NIESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMVEASRPPVM 123

Query: 123 LFMENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQ 182
           LFMENVVGFETSDTHTKM++ILEK  FS QEFILSPM FGVPYSRPRYF  AKR+PL F+
Sbjct: 124 LFMENVVGFETSDTHTKMIEILEKTGFSTQEFILSPMQFGVPYSRPRYFCLAKRKPLFFE 183

Query: 183 RKLYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQ------ 242
           ++LYNNQ LW P+PLL+ D +LE+I+  GS+A SDKLLLSCEPI RFLD SNHQ      
Sbjct: 184 KELYNNQLLWSPNPLLDSDANLESIETHGSQATSDKLLLSCEPICRFLDHSNHQELSFYD 243

Query: 243 -----------------------------------------NIVCPDSRRCCCFTKSYYR 299
                                                    +IV PDSRRCCCFTKSYYR
Sbjct: 244 ASSIQSEVALEKNKDADEQVIEPFNQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYR 303

[Close]

BLAST of Cp4.1LG07g02960 vs. NCBI nr
Match: KAG6598586.1 (tRNA (cytosine(38)-C(5))-methyltransferase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029520.1 tRNA (cytosine(38)-C(5))-methyltransferase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 428 bits (1100), Expect = 5.27e-147
Identity = 232/381 (60.89%), Postives = 256/381 (67.19%), Query Frame = 0


Query: 5   PKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRC- 64
           PK + E WRVLEF+SGIGGMRYSLL AG+DA+V++AFDIN+KANDVYEHNFGDRP+Q   
Sbjct: 6   PKLQGEPWRVLEFYSGIGGMRYSLLRAGIDAKVIRAFDINNKANDVYEHNFGDRPYQGNI 65

Query: 65  ------------SGIFIPQNSC------------------------ELMLQTSRPPVMLF 124
                       + +++    C                        ELMLQ SRPPVMLF
Sbjct: 66  ESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMLQASRPPVMLF 125

Query: 125 MENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQRK 184
           MENVVGFETSDTHTKM++ILEKA FSRQEFILSPM F VPYSRPRYF  AKRRPLSFQ +
Sbjct: 126 MENVVGFETSDTHTKMIEILEKAGFSRQEFILSPMQFRVPYSRPRYFCLAKRRPLSFQTQ 185

Query: 185 LYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQN------- 244
           L NNQ LW P PLLE D DLE I++ GS+  SDKLLLSCEPIR+FLD SNHQN       
Sbjct: 186 LCNNQLLWSPRPLLENDADLEIIESHGSQTTSDKLLLSCEPIRKFLDNSNHQNEFTSHDA 245

Query: 245 -----------------------------------------IVCPDSRRCCCFTKSYYRY 299
                                                    IV PDSRRCCCFTKSYYRY
Sbjct: 246 SSIHREGALEKTKDVDEQDIESFDQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRY 305

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy TrEMBL
Match: A0A6J1BVV7 (DNA (Cytosine-5)-methyltransferase isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005184 PE=3 SV=1)

HSP 1 Score: 441 bits (1134), Expect = 1.62e-152
Identity = 241/378 (63.76%), Postives = 260/378 (68.78%), Query Frame = 0


Query: 5   PKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRC- 64
           P+ + E WRVLEF+SGIGGMRYSLLSAGVDA+VVQAFDINDKANDVYEHNFGDRP+Q   
Sbjct: 6   PQLQGEPWRVLEFYSGIGGMRYSLLSAGVDAKVVQAFDINDKANDVYEHNFGDRPYQGNI 65

Query: 65  ------------SGIFIPQNSC------------------------ELMLQTSRPPVMLF 124
                       + +++    C                        ELMLQTSRPPVMLF
Sbjct: 66  ESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKHSGDARAFSFLKILELMLQTSRPPVMLF 125

Query: 125 MENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQRK 184
           MENVVGFETSDTHTKM++ILEKADFSRQEFILSPM FGVPYSRPRYF  AKRRPLSF R 
Sbjct: 126 MENVVGFETSDTHTKMIEILEKADFSRQEFILSPMQFGVPYSRPRYFCLAKRRPLSFHRL 185

Query: 185 LYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQN------- 244
           LYNNQ LW PSPLLE DVD+ETI+N GS+A SDKLLLSCEPI RFLD S+H +       
Sbjct: 186 LYNNQLLWSPSPLLENDVDIETIENHGSQATSDKLLLSCEPICRFLDHSSHHSEFSFSDA 245

Query: 245 ---------------------------------------IVCPDSRRCCCFTKSYYRYVK 298
                                                  IV PDSRRCCCFTKSYYRYVK
Sbjct: 246 SSIQREGALEKTKDTDEQGSFDQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRYVK 305

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy TrEMBL
Match: A0A1S3BC07 (tRNA (Cytosine(38)-C(5))-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488282 PE=3 SV=1)

HSP 1 Score: 436 bits (1121), Expect = 1.59e-150
Identity = 235/382 (61.52%), Postives = 261/382 (68.32%), Query Frame = 0


Query: 3   AFPKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQR 62
            FPK +DE WRVLEF+SGIGGMRYSLLSAG+ A+VVQAFDINDKANDVYEHNFGDRP+Q 
Sbjct: 4   VFPKLQDEPWRVLEFYSGIGGMRYSLLSAGIHAKVVQAFDINDKANDVYEHNFGDRPYQG 63

Query: 63  C-------------SGIFIPQNSC------------------------ELMLQTSRPPVM 122
                         + +++    C                        ELMLQ SRPPVM
Sbjct: 64  NIESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMLQASRPPVM 123

Query: 123 LFMENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQ 182
           LFMENVVGFETSDTHTKM++ILEKA FS QEFILSPM FGVPYSRPRYF  AKR+PLSFQ
Sbjct: 124 LFMENVVGFETSDTHTKMIEILEKAGFSTQEFILSPMQFGVPYSRPRYFCLAKRKPLSFQ 183

Query: 183 RKLYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQ------ 242
           ++L+NNQ LW PSPLL+ D DLE+I+  GS+A SDKLLLSCEPI RFLD SNH+      
Sbjct: 184 KQLHNNQLLWSPSPLLDNDADLESIETHGSQATSDKLLLSCEPICRFLDHSNHRELSFYD 243

Query: 243 -----------------------------------------NIVCPDSRRCCCFTKSYYR 299
                                                    +IV PDSRRCCCFTKSYYR
Sbjct: 244 ASSIQSEVALEKNEDPNEQVIESFNQYLVPSGLIDRWGSAMDIVYPDSRRCCCFTKSYYR 303

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy TrEMBL
Match: A0A0A0LSE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380010 PE=3 SV=1)

HSP 1 Score: 429 bits (1103), Expect = 8.63e-148
Identity = 231/382 (60.47%), Postives = 258/382 (67.54%), Query Frame = 0


Query: 3   AFPKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQR 62
            FPK +DE WRVLEF+SGIGGMRYSLLSAG+ A+VVQAFDINDKANDVYEHNFGDRP+Q 
Sbjct: 4   VFPKLQDEPWRVLEFYSGIGGMRYSLLSAGIHAKVVQAFDINDKANDVYEHNFGDRPYQG 63

Query: 63  C-------------SGIFIPQNSC------------------------ELMLQTSRPPVM 122
                         + +++    C                        ELM++ SRPPVM
Sbjct: 64  NIESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMVEASRPPVM 123

Query: 123 LFMENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQ 182
           LFMENVVGFETSDTHTKM++ILEK  FS QEFILSPM FGVPYSRPRYF  AKR+PL F+
Sbjct: 124 LFMENVVGFETSDTHTKMIEILEKTGFSTQEFILSPMQFGVPYSRPRYFCLAKRKPLFFE 183

Query: 183 RKLYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQ------ 242
           ++LYNNQ LW P+PLL+ D +LE+I+  GS+A SDKLLLSCEPI RFLD SNHQ      
Sbjct: 184 KELYNNQLLWSPNPLLDSDANLESIETHGSQATSDKLLLSCEPICRFLDHSNHQELSFYD 243

Query: 243 -----------------------------------------NIVCPDSRRCCCFTKSYYR 299
                                                    +IV PDSRRCCCFTKSYYR
Sbjct: 244 ASSIQSEVALEKNKDADEQVIEPFNQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYR 303

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy TrEMBL
Match: A0A6J1K9S0 (tRNA (Cytosine(38)-C(5))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111491952 PE=3 SV=1)

HSP 1 Score: 426 bits (1094), Expect = 2.16e-146
Identity = 232/382 (60.73%), Postives = 255/382 (66.75%), Query Frame = 0


Query: 5   PKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRC- 64
           PK + E WRVLEF+SGIGGMRYSLL AG+DA+V+QAFDINDKANDVYEHNFGDRP+Q   
Sbjct: 6   PKLQGEPWRVLEFYSGIGGMRYSLLRAGIDAKVIQAFDINDKANDVYEHNFGDRPYQGNI 65

Query: 65  ------------SGIFIPQNSC------------------------ELMLQTSRPPVMLF 124
                       + +++    C                        ELMLQ SRPPVMLF
Sbjct: 66  ESLTAADIDSYRAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMLQASRPPVMLF 125

Query: 125 MENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQRK 184
           MENVVGFETSDTHTKM++ILEKA FSRQEFILSPM F VPYSRPRYF  AKRRPLSFQ +
Sbjct: 126 MENVVGFETSDTHTKMIEILEKAGFSRQEFILSPMQFRVPYSRPRYFCLAKRRPLSFQTQ 185

Query: 185 LYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQN------- 244
           L NNQ LW P PLLE D DLE I++ GS+  SDKLLLSCEPI +FLD SNHQN       
Sbjct: 186 LCNNQLLWSPWPLLENDADLEIIESHGSQTTSDKLLLSCEPICKFLDNSNHQNEFSSHDA 245

Query: 245 ------------------------------------------IVCPDSRRCCCFTKSYYR 299
                                                     IV PDSRRCCCFTKSYYR
Sbjct: 246 SSIHREEGALEKIKDVDEQDIESFDQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYR 305

[Close]

BLAST of Cp4.1LG07g02960 vs. ExPASy TrEMBL
Match: A0A6J1HD73 (tRNA (Cytosine(38)-C(5))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111462432 PE=3 SV=1)

HSP 1 Score: 425 bits (1092), Expect = 4.19e-146
Identity = 231/381 (60.63%), Postives = 254/381 (66.67%), Query Frame = 0


Query: 5   PKQEDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPHQRC- 64
           PK + E WRVLEF+SGIGGMRYSLL AG+DA+V+QAFDINDKANDVYEHNFGDRP+Q   
Sbjct: 6   PKLQGEPWRVLEFYSGIGGMRYSLLRAGIDAKVIQAFDINDKANDVYEHNFGDRPYQGNI 65

Query: 65  ------------SGIFIPQNSC------------------------ELMLQTSRPPVMLF 124
                       + +++    C                        ELMLQ SRPPVMLF
Sbjct: 66  ESLTAADIDSYQAHVWLLSPPCQPYTRQGLQKQSGDARAFSFLKILELMLQASRPPVMLF 125

Query: 125 MENVVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYFW-AKRRPLSFQRK 184
           MENVVGFETSDTHTKM++ILEKA FSRQEFILSPM F VPYSRPRYF  AKRRPLSFQ +
Sbjct: 126 MENVVGFETSDTHTKMIEILEKAGFSRQEFILSPMQFRVPYSRPRYFCLAKRRPLSFQTQ 185

Query: 185 LYNNQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNHQN------- 244
           L NNQ LW P PLLE D DL+ I++ GS+  SDK LLSCEPI +FLD SNHQN       
Sbjct: 186 LCNNQLLWSPWPLLENDADLDIIESHGSQTTSDKFLLSCEPICKFLDNSNHQNEFSSHDA 245

Query: 245 -----------------------------------------IVCPDSRRCCCFTKSYYRY 299
                                                    IV PDSRRCCCFTKSYYRY
Sbjct: 246 SSIHREGALEKTKDVDEQDIESFDQYLVPSSLIDRWGSAMDIVYPDSRRCCCFTKSYYRY 305

[Close]

BLAST of Cp4.1LG07g02960 vs. TAIR 10
Match: AT5G25480.1 (DNA methyltransferase-2 )

HSP 1 Score: 316.2 bits (809), Expect = 2.8e-86
Identity = 177/372 (47.58%), Postives = 219/372 (58.87%), Query Frame = 0


Query: 8   EDEHWRVLEFFSGIGGMRYSLLSAGVDAEVVQAFDINDKANDVYEHNFGDRPH------- 67
           E + W+VLEF+SGIGGMRYSL+++G+ +EVV+AF+IND ANDVY+HNF  RP+       
Sbjct: 11  EKKPWQVLEFYSGIGGMRYSLMASGIVSEVVEAFEINDSANDVYQHNFKHRPYQGNIQSL 70

Query: 68  ---------------------------QRCSG---IFIPQNSCELMLQTSRPPVMLFMEN 127
                                      Q+ SG    F      EL+  T++PP MLF+EN
Sbjct: 71  TAADLDKYNADAWLLSPPCQPYTRQGLQKHSGDARAFSFLRILELIPHTTKPPQMLFVEN 130

Query: 128 VVGFETSDTHTKMVDILEKADFSRQEFILSPMHFGVPYSRPRYF-WAKRRPLSFQRKLYN 187
           VVGFETSDTH +M+  L K D+  QEFILSP+ FGVPYSRPRYF  AKR+PL F+ +  N
Sbjct: 131 VVGFETSDTHMEMIGTLTKLDYVTQEFILSPLQFGVPYSRPRYFCLAKRKPLPFKSQHSN 190

Query: 188 NQPLWRPSPLLEIDVDLETIKNRGSEAASDKLLLSCEPIRRFLDKSNH------------ 247
           N+ LW P PL   D  +E  K +  E   DKLL  C+P+ +FL+ + H            
Sbjct: 191 NKLLWSPDPLYGRDDQVEFGKCQAEEGL-DKLLEFCKPVEKFLELAAHVDGEPSSVDDSE 250

Query: 248 ----------------------------------QNIVCPDSRRCCCFTKSYYRYVKGTG 296
                                              +IV PDS+RCCCFTKSYYRYVKGTG
Sbjct: 251 NGSKDCCGQEGDSVPDSVHQYLVPVSLIERWGNAMDIVYPDSKRCCCFTKSYYRYVKGTG 310

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g02960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JWT7	3.9e-85	47.58	tRNA (cytosine(38)-C(5))-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O55055	2.4e-34	30.87	tRNA (cytosine(38)-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Trdmt1 PE...	[more]
Q54JH6	1.7e-32	31.75	DNA (cytosine-5)-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=dnmA ...	[more]
O14717	1.7e-32	28.61	tRNA (cytosine(38)-C(5))-methyltransferase OS=Homo sapiens OX=9606 GN=TRDMT1 PE=...	[more]
Q4G073	1.7e-32	29.16	tRNA (cytosine(38)-C(5))-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trdm...	[more]

BLAST of Cp4.1LG07g02960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132298.1	3.35e-152	63.76	DNA (cytosine-5)-methyltransferase isoform X1 [Momordica charantia]	[more]
XP_008445162.1	3.28e-150	61.52	PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase isoform X1 [Cucumis melo]	[more]
XP_038884640.1	7.08e-150	62.17	tRNA (cytosine(38)-C(5))-methyltransferase 2 isoform X1 [Benincasa hispida]	[more]
XP_004138735.1	1.78e-147	60.47	tRNA (cytosine(38)-C(5))-methyltransferase 2 isoform X2 [Cucumis sativus]	[more]
KAG6598586.1	5.27e-147	60.89	tRNA (cytosine(38)-C(5))-methyltransferase 2, partial [Cucurbita argyrosperma su...	[more]

BLAST of Cp4.1LG07g02960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVV7	1.62e-152	63.76	DNA (Cytosine-5)-methyltransferase isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A1S3BC07	1.59e-150	61.52	tRNA (Cytosine(38)-C(5))-methyltransferase isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LSE8	8.63e-148	60.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380010 PE=3 SV=1	[more]
A0A6J1K9S0	2.16e-146	60.73	tRNA (Cytosine(38)-C(5))-methyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1HD73	4.19e-146	60.63	tRNA (Cytosine(38)-C(5))-methyltransferase OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Cp4.1LG07g02960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25480.1	2.8e-86	47.58	DNA methyltransferase-2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 13..292 e-value: 2.4E-65 score: 222.8
None	No IPR available	GENE3D	3.90.120.10	DNA Methylase, subunit A, domain 2	coord: 158..282 e-value: 2.4E-65 score: 222.8
None	No IPR available	PANTHER	PTHR46098	TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE	coord: 9..62 coord: 73..197 coord: 199..296
IPR001525	C-5 cytosine methyltransferase	PFAM	PF00145	DNA_methylase	coord: 13..58 e-value: 5.0E-6 score: 26.1 coord: 81..292 e-value: 1.6E-10 score: 40.9
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 12..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g02960.1	Cp4.1LG07g02960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity