Cp4.1LG07g02390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g02390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	GATA transcription factor
Location	Cp4.1LG07: 1328410 .. 1329153 (-)
RNA-Seq Expression	Cp4.1LG07g02390
Synteny	Cp4.1LG07g02390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAGCTAGAGCTCATCACCGGAGTCAAAGTCAAACCCGACGAGCCACCTCAATCCCAGCACCCAACCACCGCGCCCTCCGCCGTCTCCGCCGCCTCTCACGGCCGAAATGCAGCAGCTGCGATCTTCAAACCCGACATTGTAGCGGTTCCGGCGAAGGCCCGGAGCAAACGCTCACGCATCATCCCATCAAATTGGAACAACTCCCGCCTCCTCCCACTTTCTCCGACCAGCTCCTCCTCCGAGCTAGACATCCCGGCCACCGAACCGCCACCGCACCCGGTTAAGAAAGTCCCTCCAAAAGTGGCGGCGACGGCGACGGCGACGGCGGCGGTGAAGAAAAAAGAATCCTCCTCCTCATCGGAGACCGGAATGTCGGCTGGAGAAGGGCGGAAGTGTATGCACTGTGCCACTGACAAGACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTTTGTAACGCTTGTGGGGTCCGCTACAAATCCGGGCGGCTGGTGCCGGAATACCGGCCGGCGGCGAGCCCGACATTTGTGCTGACAAAACACTCGAATTCTCACCGGAAAGTGTTGGAGCTTCGACGGCAAAAGGAACTGCAGAAAGCGCAGGAACAGCAGGCGTTGATGATGGATCATCATCACCATCATCACCATCAGGAAATGATGTTTGATTCATCCAACGGTGAGGATTATCTGATGAAGCAAAACGTGGCTCATGATTACCTGCACCTGATCTGA

mRNA sequence

ATGCAAAAGCTAGAGCTCATCACCGGAGTCAAAGTCAAACCCGACGAGCCACCTCAATCCCAGCACCCAACCACCGCGCCCTCCGCCGTCTCCGCCGCCTCTCACGGCCGAAATGCAGCAGCTGCGATCTTCAAACCCGACATTGTAGCGGTTCCGGCGAAGGCCCGGAGCAAACGCTCACGCATCATCCCATCAAATTGGAACAACTCCCGCCTCCTCCCACTTTCTCCGACCAGCTCCTCCTCCGAGCTAGACATCCCGGCCACCGAACCGCCACCGCACCCGGTTAAGAAAGTCCCTCCAAAAGTGGCGGCGACGGCGACGGCGACGGCGGCGGTGAAGAAAAAAGAATCCTCCTCCTCATCGGAGACCGGAATGTCGGCTGGAGAAGGGCGGAAGTGTATGCACTGTGCCACTGACAAGACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTTTGTAACGCTTGTGGGGTCCGCTACAAATCCGGGCGGCTGGTGCCGGAATACCGGCCGGCGGCGAGCCCGACATTTGTGCTGACAAAACACTCGAATTCTCACCGGAAAGTGTTGGAGCTTCGACGGCAAAAGGAACTGCAGAAAGCGCAGGAACAGCAGGCGTTGATGATGGATCATCATCACCATCATCACCATCAGGAAATGATGTTTGATTCATCCAACGGTGAGGATTATCTGATGAAGCAAAACGTGGCTCATGATTACCTGCACCTGATCTGA

Coding sequence (CDS)

ATGCAAAAGCTAGAGCTCATCACCGGAGTCAAAGTCAAACCCGACGAGCCACCTCAATCCCAGCACCCAACCACCGCGCCCTCCGCCGTCTCCGCCGCCTCTCACGGCCGAAATGCAGCAGCTGCGATCTTCAAACCCGACATTGTAGCGGTTCCGGCGAAGGCCCGGAGCAAACGCTCACGCATCATCCCATCAAATTGGAACAACTCCCGCCTCCTCCCACTTTCTCCGACCAGCTCCTCCTCCGAGCTAGACATCCCGGCCACCGAACCGCCACCGCACCCGGTTAAGAAAGTCCCTCCAAAAGTGGCGGCGACGGCGACGGCGACGGCGGCGGTGAAGAAAAAAGAATCCTCCTCCTCATCGGAGACCGGAATGTCGGCTGGAGAAGGGCGGAAGTGTATGCACTGTGCCACTGACAAGACGCCGCAGTGGCGGACGGGCCCAATGGGCCCAAAGACGCTTTGTAACGCTTGTGGGGTCCGCTACAAATCCGGGCGGCTGGTGCCGGAATACCGGCCGGCGGCGAGCCCGACATTTGTGCTGACAAAACACTCGAATTCTCACCGGAAAGTGTTGGAGCTTCGACGGCAAAAGGAACTGCAGAAAGCGCAGGAACAGCAGGCGTTGATGATGGATCATCATCACCATCATCACCATCAGGAAATGATGTTTGATTCATCCAACGGTGAGGATTATCTGATGAAGCAAAACGTGGCTCATGATTACCTGCACCTGATCTGA

Protein sequence

MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRSRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVAHDYLHLI

Homology

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy Swiss-Prot
Match: P69781 (GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.7e-49
Identity = 130/256 (50.78%), Postives = 159/256 (62.11%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           + KLELI+G K +PD           P + + +    N+++ IF  D V+VPAKARSKRS
Sbjct: 98  VHKLELISGFKSRPD-----------PKSDTGSPENPNSSSPIFTTD-VSVPAKARSKRS 157

Query: 61  RIIPSNWNNSRLLPL----SPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAV--- 120
           R    NW +  LL      SP +  + L       PP      PP + A      AV   
Sbjct: 158 RAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPP----TSPPLLMAPLGKKQAVDGG 217

Query: 121 -KKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 180
            ++K+  SS E+G    E R+C+HCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY
Sbjct: 218 HRRKKDVSSPESG--GAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 277

Query: 181 RPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFD-SSNGE 240
           RPAASPTFVL KHSNSHRKV+ELRRQKE+ +A  +      HHHH     M+FD SS+G+
Sbjct: 278 RPAASPTFVLAKHSNSHRKVMELRRQKEMSRAHHE----FIHHHHGTDTAMIFDVSSDGD 331

Query: 241 DYLMKQNVAHDYLHLI 248
           DYL+  NV  D+  LI
Sbjct: 338 DYLIHHNVGPDFRQLI 331

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy Swiss-Prot
Match: O82632 (GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-40
Identity = 108/205 (52.68%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 49  VAVPAKARSKRSRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATAT 108
           VAVPAKARSKRSR   S W  SRLL L+        D   T P     KK   +V     
Sbjct: 137 VAVPAKARSKRSRSAASTW-ASRLLSLA--------DSDETNP-----KKKQRRV----- 196

Query: 109 ATAAVKKKESSSSSETGMSAGE---GRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKS 168
                  KE   + +  +  GE   GR+C+HCAT+KTPQWRTGPMGPKTLCNACGVRYKS
Sbjct: 197 -------KEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKS 256

Query: 169 GRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMF 228
           GRLVPEYRPA+SPTFV+ +HSNSHRKV+ELRRQKE++       L  ++        +M 
Sbjct: 257 GRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKEMRDEHLLSQLRCEN-------LLMD 308

Query: 229 DSSNGEDYLMKQN---VAHDYLHLI 248
             SNGED+LM  N   VA D+ HLI
Sbjct: 317 IRSNGEDFLMHNNTNHVAPDFRHLI 308

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy Swiss-Prot
Match: O49741 (GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 87/167 (52.10%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 52  PAKARSKRSRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATA 111
           P K RSKRSR            P     + S + + +     H   K  PK   +     
Sbjct: 112 PGKPRSKRSR-----------APAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGG 171

Query: 112 AVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPE 171
              + +SSSS  T    G  R+C HCA++KTPQWRTGP+GPKTLCNACGVR+KSGRLVPE
Sbjct: 172 GGGRHQSSSSETT--EGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPE 231

Query: 172 YRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHH 219
           YRPA+SPTFVLT+HSNSHRKV+ELRRQKE+ +  +Q  L   HHHHH
Sbjct: 232 YRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQL---HHHHH 262

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy Swiss-Prot
Match: O49743 (GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 5.9e-31
Identity = 77/153 (50.33%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 60  SRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVP-PKVAAT-------ATATA 119
           SR +  ++++    P +P + +   +I  T  P     + P P VA T           +
Sbjct: 81  SRFVDDSFSD---FPANPLTMTVRPEISFTGKPRSRRSRAPAPSVAGTWAPMSESELCHS 140

Query: 120 AVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPE 179
             K K     +   ++A   R+C HCA++KTPQWRTGP+GPKTLCNACGVRYKSGRLVPE
Sbjct: 141 VAKPKPKKVYNAESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPE 200

Query: 180 YRPAASPTFVLTKHSNSHRKVLELRRQKELQKA 205
           YRPA+SPTFVLT+HSNSHRKV+ELRRQKE Q++
Sbjct: 201 YRPASSPTFVLTQHSNSHRKVMELRRQKEQQES 230

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy Swiss-Prot
Match: Q9FH57 (GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.2e-27
Identity = 79/155 (50.97%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 51  VPAKARSKRSRIIPSNW---NNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATA 110
           VPAKARSKR+R     W   ++S   P S  S+SS    P++ P     + + P V +  
Sbjct: 164 VPAKARSKRNRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSS-PWFSGAELLEPVVTSER 223

Query: 111 TATAAVKKKESSSSSETG--MSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKS 170
                  KK S+ S  +G        RKC HC   KTPQWR GPMG KTLCNACGVRYKS
Sbjct: 224 PPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKS 283

Query: 171 GRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE 201
           GRL+PEYRPA SPTF    HSN HRKV+E+RR+KE
Sbjct: 284 GRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317

[Close]

BLAST of Cp4.1LG07g02390 vs. NCBI nr
Match: XP_023538437.1 (GATA transcription factor 12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 476 bits (1225), Expect = 6.31e-167
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS
Sbjct: 139 MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 198

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 120
           RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS
Sbjct: 199 RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 258

Query: 121 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 180
           SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF
Sbjct: 259 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 318

Query: 181 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 240
           VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA
Sbjct: 319 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 378

Query: 241 HDYLHLI 247
           HDYLHLI
Sbjct: 379 HDYLHLI 385

[Close]

BLAST of Cp4.1LG07g02390 vs. NCBI nr
Match: KAG6585379.1 (GATA transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020295.1 GATA transcription factor 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 465 bits (1197), Expect = 1.28e-162
Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELITGVKVKPDEPPQS HPTTA SAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS
Sbjct: 139 MQKLELITGVKVKPDEPPQSHHPTTAVSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 198

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATA---AVKKKE 120
           RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATA   AVKKKE
Sbjct: 199 RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATASTAAVKKKE 258

Query: 121 SSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS 180
           SSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS
Sbjct: 259 SSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS 318

Query: 181 PTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQ 240
           PTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQ
Sbjct: 319 PTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQ 378

Query: 241 NVAHDYLHLI 247
           NVAHDYLHLI
Sbjct: 379 NVAHDYLHLI 388

[Close]

BLAST of Cp4.1LG07g02390 vs. NCBI nr
Match: XP_022951637.1 (GATA transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 451 bits (1159), Expect = 4.90e-157
Identity = 238/247 (96.36%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELITGVKVKPDEPPQS HPT   +AVSA SHGRNAAAAIFKPDIVAVPAKARSKRS
Sbjct: 134 MQKLELITGVKVKPDEPPQSHHPT---NAVSALSHGRNAAAAIFKPDIVAVPAKARSKRS 193

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 120
           R IPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATA  TAAVKKKESSS
Sbjct: 194 RTIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATA--TAAVKKKESSS 253

Query: 121 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 180
           SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF
Sbjct: 254 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 313

Query: 181 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 240
           VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA
Sbjct: 314 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 373

Query: 241 HDYLHLI 247
           HDYLHLI
Sbjct: 374 HDYLHLI 375

[Close]

BLAST of Cp4.1LG07g02390 vs. NCBI nr
Match: XP_023002390.1 (GATA transcription factor 12-like [Cucurbita maxima])

HSP 1 Score: 442 bits (1138), Expect = 7.95e-154
Identity = 235/247 (95.14%), Postives = 235/247 (95.14%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELITGVKVKPDEP QSQHPTTA   VSAASHGRNAAA IFKPDIVAVPAKARSKRS
Sbjct: 139 MQKLELITGVKVKPDEPLQSQHPTTA---VSAASHGRNAAAEIFKPDIVAVPAKARSKRS 198

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 120
           RIIPSNWNNSRLLPLSPTSSSSE DIPATEPPPHPVKKVPPKVAA      AVKKKESSS
Sbjct: 199 RIIPSNWNNSRLLPLSPTSSSSEQDIPATEPPPHPVKKVPPKVAA------AVKKKESSS 258

Query: 121 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 180
           SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF
Sbjct: 259 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 318

Query: 181 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 240
           VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA
Sbjct: 319 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 376

Query: 241 HDYLHLI 247
           HDYLHLI
Sbjct: 379 HDYLHLI 376

[Close]

BLAST of Cp4.1LG07g02390 vs. NCBI nr
Match: XP_038886306.1 (GATA transcription factor 12-like [Benincasa hispida])

HSP 1 Score: 301 bits (771), Expect = 2.73e-98
Identity = 174/249 (69.88%), Postives = 197/249 (79.12%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELI+GVKV+ DEP  S+ PT            RNAAA IFKPDIV+VPAKARSKRS
Sbjct: 144 MQKLELISGVKVRSDEPTNSRQPTAT----------RNAAA-IFKPDIVSVPAKARSKRS 203

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 120
           R +PSNWNNSRLLPLSPT+   E +I AT  PPHP+KK PPK AATA      KKK+S  
Sbjct: 204 RAVPSNWNNSRLLPLSPTT---EPEITATAGPPHPIKKNPPK-AATA------KKKDSP- 263

Query: 121 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 180
             E G+S+GEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF
Sbjct: 264 --EVGVSSGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 323

Query: 181 VLTKHSNSHRKVLELRRQKELQKAQEQQA--LMMDHHHHHHHQEMMFDSSNGEDYLMKQN 240
           VLTKHSNSHRKVLELRRQKEL +AQ+QQ   L++DHH     Q+M+FD+SNG+DYL+ Q+
Sbjct: 324 VLTKHSNSHRKVLELRRQKELLRAQQQQQQHLLLDHH-----QDMIFDASNGDDYLIHQH 363

Query: 241 VAHDYLHLI 247
           +  D+  LI
Sbjct: 384 MGPDFRQLI 363

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy TrEMBL
Match: A0A6J1GI87 (GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111454392 PE=3 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 2.37e-157
Identity = 238/247 (96.36%), Postives = 239/247 (96.76%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELITGVKVKPDEPPQS HPT   +AVSA SHGRNAAAAIFKPDIVAVPAKARSKRS
Sbjct: 134 MQKLELITGVKVKPDEPPQSHHPT---NAVSALSHGRNAAAAIFKPDIVAVPAKARSKRS 193

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 120
           R IPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATA  TAAVKKKESSS
Sbjct: 194 RTIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATA--TAAVKKKESSS 253

Query: 121 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 180
           SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF
Sbjct: 254 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 313

Query: 181 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 240
           VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA
Sbjct: 314 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 373

Query: 241 HDYLHLI 247
           HDYLHLI
Sbjct: 374 HDYLHLI 375

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy TrEMBL
Match: A0A6J1KNT0 (GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111496245 PE=3 SV=1)

HSP 1 Score: 442 bits (1138), Expect = 3.85e-154
Identity = 235/247 (95.14%), Postives = 235/247 (95.14%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELITGVKVKPDEP QSQHPTTA   VSAASHGRNAAA IFKPDIVAVPAKARSKRS
Sbjct: 139 MQKLELITGVKVKPDEPLQSQHPTTA---VSAASHGRNAAAEIFKPDIVAVPAKARSKRS 198

Query: 61  RIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESSS 120
           RIIPSNWNNSRLLPLSPTSSSSE DIPATEPPPHPVKKVPPKVAA      AVKKKESSS
Sbjct: 199 RIIPSNWNNSRLLPLSPTSSSSEQDIPATEPPPHPVKKVPPKVAA------AVKKKESSS 258

Query: 121 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 180
           SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF
Sbjct: 259 SSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTF 318

Query: 181 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 240
           VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA
Sbjct: 319 VLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFDSSNGEDYLMKQNVA 376

Query: 241 HDYLHLI 247
           HDYLHLI
Sbjct: 379 HDYLHLI 376

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy TrEMBL
Match: A0A6J1BSX6 (GATA transcription factor OS=Momordica charantia OX=3673 GN=LOC111005058 PE=3 SV=1)

HSP 1 Score: 289 bits (740), Expect = 7.17e-94
Identity = 170/252 (67.46%), Postives = 191/252 (75.79%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           MQKLELI+GVKVK DE  Q + P+ A +          AAA IFKPDIV+VPAKARSKRS
Sbjct: 138 MQKLELISGVKVKSDETFQIRQPSPAVAV---------AAAEIFKPDIVSVPAKARSKRS 197

Query: 61  RI-IPSNWNNSRLLPLSPTSSSSELDIPATEP-PPHPVKKVPPKVAATATATAAVKKKES 120
           R  +P+NWNNSRLLPLSPT+SSSELD+ A    PPHP KK      AT  AT   KKK+ 
Sbjct: 198 RAAVPTNWNNSRLLPLSPTTSSSELDVLAVAATPPHPGKK------ATIKATVTAKKKDC 257

Query: 121 SSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASP 180
               + G S GEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASP
Sbjct: 258 P---DAGASPGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASP 317

Query: 181 TFVLTKHSNSHRKVLELRRQKELQKAQEQQ---ALMMDHHHHHHHQEMMFDSSNGEDYLM 240
           TFVLTKHSNSHRKVLELRRQKELQ+ Q+QQ    L++DHH     Q M+FD+SNG+DYL+
Sbjct: 318 TFVLTKHSNSHRKVLELRRQKELQRTQQQQHQHQLILDHH-----QNMIFDASNGDDYLI 366

Query: 241 KQNVAHDYLHLI 247
            Q+V  D+  LI
Sbjct: 378 HQHVGPDFRQLI 366

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy TrEMBL
Match: A0A0A0LPR5 (GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_2G373450 PE=3 SV=1)

HSP 1 Score: 289 bits (739), Expect = 1.30e-93
Identity = 167/250 (66.80%), Postives = 190/250 (76.00%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPP-QSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKR 60
           MQKLELI+GVKVK DEPP QS  PT   SA           AAIFKP+IV+VPAKARSKR
Sbjct: 152 MQKLELISGVKVKSDEPPTQSPQPTATRSA-----------AAIFKPEIVSVPAKARSKR 211

Query: 61  SRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESS 120
           SR +PSNWNNS LLPLS  ++ SE   P  +P  HP+KK  PK AATA      KKK+S 
Sbjct: 212 SRALPSNWNNSALLPLSSPTAESETTPPIEQP--HPIKKTLPKAAATA------KKKDSP 271

Query: 121 SSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT 180
              + G S+GEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT
Sbjct: 272 ---DLGFSSGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT 331

Query: 181 FVLTKHSNSHRKVLELRRQKELQKAQEQQA--LMMDHHHHHHHQEMMFDSSNGEDYLMKQ 240
           FVLTKHSNSHRKVLELRRQKE+ +AQ+QQ   L++DH      Q+M+FD+SNG+DYL+ Q
Sbjct: 332 FVLTKHSNSHRKVLELRRQKEILRAQQQQPQHLLLDHR-----QDMIFDASNGDDYLIHQ 374

Query: 241 NVAHDYLHLI 247
           +V  D+  LI
Sbjct: 392 HVGPDFRQLI 374

[Close]

BLAST of Cp4.1LG07g02390 vs. ExPASy TrEMBL
Match: A0A5A7VCX1 (GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003790 PE=3 SV=1)

HSP 1 Score: 278 bits (712), Expect = 1.19e-89
Identity = 163/250 (65.20%), Postives = 189/250 (75.60%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDE-PPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKR 60
           MQKLEL++GVKVK DE P QS  PT               AAAIFKP+IV+VPAKARSKR
Sbjct: 144 MQKLELLSGVKVKSDEIPAQSPQPTAT-----------RTAAAIFKPEIVSVPAKARSKR 203

Query: 61  SRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAVKKKESS 120
           SR +PSNWNNS LLPLSPT+   E +I A    P+ +KK  PKVAATA      KKK++ 
Sbjct: 204 SRALPSNWNNSSLLPLSPTA---EPEITAPIGQPYSIKKPLPKVAATA------KKKDNP 263

Query: 121 SSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT 180
              + G S+GEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT
Sbjct: 264 ---DVGFSSGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPT 323

Query: 181 FVLTKHSNSHRKVLELRRQKELQKAQEQQA--LMMDHHHHHHHQEMMFDSSNGEDYLMKQ 240
           FVLTKHSNSHRKVLELRRQKE+ +AQ+QQ   L++DH      Q+M+FD+SNG+DYL+ Q
Sbjct: 324 FVLTKHSNSHRKVLELRRQKEILRAQQQQQQHLLLDHR-----QDMIFDASNGDDYLIHQ 365

Query: 241 NVAHDYLHLI 247
           +V  D+  +I
Sbjct: 384 HVGPDFRQMI 365

[Close]

BLAST of Cp4.1LG07g02390 vs. TAIR 10
Match: AT5G25830.1 (GATA transcription factor 12 )

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-50
Identity = 130/256 (50.78%), Postives = 159/256 (62.11%), Query Frame = 0


Query: 1   MQKLELITGVKVKPDEPPQSQHPTTAPSAVSAASHGRNAAAAIFKPDIVAVPAKARSKRS 60
           + KLELI+G K +PD           P + + +    N+++ IF  D V+VPAKARSKRS
Sbjct: 98  VHKLELISGFKSRPD-----------PKSDTGSPENPNSSSPIFTTD-VSVPAKARSKRS 157

Query: 61  RIIPSNWNNSRLLPL----SPTSSSSELDIPATEPPPHPVKKVPPKVAATATATAAV--- 120
           R    NW +  LL      SP +  + L       PP      PP + A      AV   
Sbjct: 158 RAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPP----TSPPLLMAPLGKKQAVDGG 217

Query: 121 -KKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 180
            ++K+  SS E+G    E R+C+HCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY
Sbjct: 218 HRRKKDVSSPESG--GAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEY 277

Query: 181 RPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMFD-SSNGE 240
           RPAASPTFVL KHSNSHRKV+ELRRQKE+ +A  +      HHHH     M+FD SS+G+
Sbjct: 278 RPAASPTFVLAKHSNSHRKVMELRRQKEMSRAHHE----FIHHHHGTDTAMIFDVSSDGD 331

Query: 241 DYLMKQNVAHDYLHLI 248
           DYL+  NV  D+  LI
Sbjct: 338 DYLIHHNVGPDFRQLI 331

[Close]

BLAST of Cp4.1LG07g02390 vs. TAIR 10
Match: AT4G32890.1 (GATA transcription factor 9 )

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 108/205 (52.68%), Postives = 127/205 (61.95%), Query Frame = 0


Query: 49  VAVPAKARSKRSRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATAT 108
           VAVPAKARSKRSR   S W  SRLL L+        D   T P     KK   +V     
Sbjct: 137 VAVPAKARSKRSRSAASTW-ASRLLSLA--------DSDETNP-----KKKQRRV----- 196

Query: 109 ATAAVKKKESSSSSETGMSAGE---GRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKS 168
                  KE   + +  +  GE   GR+C+HCAT+KTPQWRTGPMGPKTLCNACGVRYKS
Sbjct: 197 -------KEQDFAGDMDVDCGESGGGRRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKS 256

Query: 169 GRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHHHHQEMMF 228
           GRLVPEYRPA+SPTFV+ +HSNSHRKV+ELRRQKE++       L  ++        +M 
Sbjct: 257 GRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKEMRDEHLLSQLRCEN-------LLMD 308

Query: 229 DSSNGEDYLMKQN---VAHDYLHLI 248
             SNGED+LM  N   VA D+ HLI
Sbjct: 317 IRSNGEDFLMHNNTNHVAPDFRHLI 308

[Close]

BLAST of Cp4.1LG07g02390 vs. TAIR 10
Match: AT2G45050.1 (GATA transcription factor 2 )

HSP 1 Score: 148.3 bits (373), Expect = 8.2e-36
Identity = 87/167 (52.10%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 52  PAKARSKRSRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATATATA 111
           P K RSKRSR            P     + S + + +     H   K  PK   +     
Sbjct: 112 PGKPRSKRSR-----------APAPFAGTWSPMPLESEHQQLHSAAKFKPKKEQSGGGGG 171

Query: 112 AVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPE 171
              + +SSSS  T    G  R+C HCA++KTPQWRTGP+GPKTLCNACGVR+KSGRLVPE
Sbjct: 172 GGGRHQSSSSETT--EGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPE 231

Query: 172 YRPAASPTFVLTKHSNSHRKVLELRRQKELQKAQEQQALMMDHHHHH 219
           YRPA+SPTFVLT+HSNSHRKV+ELRRQKE+ +  +Q  L   HHHHH
Sbjct: 232 YRPASSPTFVLTQHSNSHRKVMELRRQKEVMRQPQQVQL---HHHHH 262

[Close]

BLAST of Cp4.1LG07g02390 vs. TAIR 10
Match: AT3G60530.1 (GATA transcription factor 4 )

HSP 1 Score: 136.0 bits (341), Expect = 4.2e-32
Identity = 77/153 (50.33%), Postives = 100/153 (65.36%), Query Frame = 0


Query: 60  SRIIPSNWNNSRLLPLSPTSSSSELDIPATEPPPHPVKKVP-PKVAAT-------ATATA 119
           SR +  ++++    P +P + +   +I  T  P     + P P VA T           +
Sbjct: 81  SRFVDDSFSD---FPANPLTMTVRPEISFTGKPRSRRSRAPAPSVAGTWAPMSESELCHS 140

Query: 120 AVKKKESSSSSETGMSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPE 179
             K K     +   ++A   R+C HCA++KTPQWRTGP+GPKTLCNACGVRYKSGRLVPE
Sbjct: 141 VAKPKPKKVYNAESVTADGARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPE 200

Query: 180 YRPAASPTFVLTKHSNSHRKVLELRRQKELQKA 205
           YRPA+SPTFVLT+HSNSHRKV+ELRRQKE Q++
Sbjct: 201 YRPASSPTFVLTQHSNSHRKVMELRRQKEQQES 230

[Close]

BLAST of Cp4.1LG07g02390 vs. TAIR 10
Match: AT5G66320.1 (GATA transcription factor 5 )

HSP 1 Score: 122.9 bits (307), Expect = 3.7e-28
Identity = 79/155 (50.97%), Postives = 94/155 (60.65%), Query Frame = 0


Query: 51  VPAKARSKRSRIIPSNW---NNSRLLPLSPTSSSSELDIPATEPPPHPVKKVPPKVAATA 110
           VPAKARSKR+R     W   ++S   P S  S+SS    P++ P     + + P V +  
Sbjct: 164 VPAKARSKRNRNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSS-PWFSGAELLEPVVTSER 223

Query: 111 TATAAVKKKESSSSSETG--MSAGEGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKS 170
                  KK S+ S  +G        RKC HC   KTPQWR GPMG KTLCNACGVRYKS
Sbjct: 224 PPFPKKHKKRSAESVFSGELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKS 283

Query: 171 GRLVPEYRPAASPTFVLTKHSNSHRKVLELRRQKE 201
           GRL+PEYRPA SPTF    HSN HRKV+E+RR+KE
Sbjct: 284 GRLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKE 317

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g02390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P69781	1.7e-49	50.78	GATA transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=GATA12 PE=2 SV=1	[more]
O82632	1.8e-40	52.68	GATA transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=GATA9 PE=2 SV=1	[more]
O49741	1.2e-34	52.10	GATA transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=GATA2 PE=2 SV=1	[more]
O49743	5.9e-31	50.33	GATA transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=GATA4 PE=2 SV=1	[more]
Q9FH57	5.2e-27	50.97	GATA transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=GATA5 PE=2 SV=1	[more]

BLAST of Cp4.1LG07g02390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538437.1	6.31e-167	100.00	GATA transcription factor 12-like [Cucurbita pepo subsp. pepo]	[more]
KAG6585379.1	1.28e-162	98.00	GATA transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022951637.1	4.90e-157	96.36	GATA transcription factor 12-like [Cucurbita moschata]	[more]
XP_023002390.1	7.95e-154	95.14	GATA transcription factor 12-like [Cucurbita maxima]	[more]
XP_038886306.1	2.73e-98	69.88	GATA transcription factor 12-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG07g02390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI87	2.37e-157	96.36	GATA transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111454392 PE=3 SV=...	[more]
A0A6J1KNT0	3.85e-154	95.14	GATA transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111496245 PE=3 SV=1	[more]
A0A6J1BSX6	7.17e-94	67.46	GATA transcription factor OS=Momordica charantia OX=3673 GN=LOC111005058 PE=3 SV...	[more]
A0A0A0LPR5	1.30e-93	66.80	GATA transcription factor OS=Cucumis sativus OX=3659 GN=Csa_2G373450 PE=3 SV=1	[more]
A0A5A7VCX1	1.19e-89	65.20	GATA transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]

BLAST of Cp4.1LG07g02390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25830.1	1.2e-50	50.78	GATA transcription factor 12	[more]
AT4G32890.1	1.3e-41	52.68	GATA transcription factor 9	[more]
AT2G45050.1	8.2e-36	52.10	GATA transcription factor 2	[more]
AT3G60530.1	4.2e-32	50.33	GATA transcription factor 4	[more]
AT5G66320.1	3.7e-28	50.97	GATA transcription factor 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 128..178 e-value: 7.5E-18 score: 75.3
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 134..167 e-value: 1.1E-15 score: 56.9
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 134..159
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 128..164 score: 12.545015
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 133..180 e-value: 7.28183E-15 score: 65.0866
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 126..209 e-value: 3.3E-16 score: 60.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..32
None	No IPR available	PANTHER	PTHR45658:SF43	GATA TRANSCRIPTION FACTOR	coord: 1..247
None	No IPR available	PANTHER	PTHR45658	GATA TRANSCRIPTION FACTOR	coord: 1..247
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 130..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g02390.1	Cp4.1LG07g02390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding