Cp4.1LG07g01710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g01710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	TPR_REGION domain-containing protein
Location	Cp4.1LG07: 1043550 .. 1044185 (+)
RNA-Seq Expression	Cp4.1LG07g01710
Synteny	Cp4.1LG07g01710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCGGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCTTGGCGATGCACAACATTCCACAGAGATTCTTTGCGAAGCTTCGGTTTCGTTTTCGTTCCGATGTCGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCAAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAACAAGTCGTAGCGGAAGCCGATAAGGCGATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGATATTCAAGGATTCAAGACCTCTGCTCTTGAATCACTCGATACGGCTTTGTCGCCCCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTACAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCGTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTGAGTCAGAATGCGAATGCGTATTGTTGGTTGGGGAAATGCTATGAAATGAAGAAACTAAGAGGAGAAGCTAAGAAAGCATATGAAGAAGCGTTGAACATCGAGCCACGATTATCCAAAGCCCGGGAGGCATTGGAACGCCTATCATCATCGTGA

mRNA sequence

ATGGTGGCGGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCTTGGCGATGCACAACATTCCACAGAGATTCTTTGCGAAGCTTCGGTTTCGTTTTCGTTCCGATGTCGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCAAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAACAAGTCGTAGCGGAAGCCGATAAGGCGATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGATATTCAAGGATTCAAGACCTCTGCTCTTGAATCACTCGATACGGCTTTGTCGCCCCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTACAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCGTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTGAGTCAGAATGCGAATGCGTATTGTTGGTTGGGGAAATGCTATGAAATGAAGAAACTAAGAGGAGAAGCTAAGAAAGCATATGAAGAAGCGTTGAACATCGAGCCACGATTATCCAAAGCCCGGGAGGCATTGGAACGCCTATCATCATCGTGA

Coding sequence (CDS)

ATGGTGGCGGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCTTGGCGATGCACAACATTCCACAGAGATTCTTTGCGAAGCTTCGGTTTCGTTTTCGTTCCGATGTCGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCAAGATCTGCTCCGTCGCGCTCATCGGCGACGTCGTTGGCGGAACAAGTCGTAGCGGAAGCCGATAAGGCGATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGATATTCAAGGATTCAAGACCTCTGCTCTTGAATCACTCGATACGGCTTTGTCGCCCCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTACAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCGTAGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTGAGTCAGAATGCGAATGCGTATTGTTGGTTGGGGAAATGCTATGAAATGAAGAAACTAAGAGGAGAAGCTAAGAAAGCATATGAAGAAGCGTTGAACATCGAGCCACGATTATCCAAAGCCCGGGAGGCATTGGAACGCCTATCATCATCGTGA

Protein sequence

MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAAKSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKLRGEAKKAYEEALNIEPRLSKAREALERLSSS

Homology

[Close]

BLAST of Cp4.1LG07g01710 vs. NCBI nr
Match: XP_023537835.1 (uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378 bits (970), Expect = 2.08e-131
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLSKAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. NCBI nr
Match: XP_022951869.1 (uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothetical protein SDJN03_18077, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 376 bits (966), Expect = 8.48e-131
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRR VVDSALADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLSKAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. NCBI nr
Match: XP_023002879.1 (uncharacterized protein LOC111496615 [Cucurbita maxima])

HSP 1 Score: 376 bits (965), Expect = 1.20e-130
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRRAVVDSA+ADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLSKAREALERLS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. NCBI nr
Match: KAG7020255.1 (hypothetical protein SDJN02_16938, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375 bits (963), Expect = 2.43e-130
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGF+TSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFRTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRR VVDSALADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLSKAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. NCBI nr
Match: XP_038884950.1 (uncharacterized protein LOC120075535 [Benincasa hispida])

HSP 1 Score: 353 bits (906), Expect = 1.18e-121
Identity = 197/211 (93.36%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQI LILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. ExPASy TrEMBL
Match: A0A6J1GK03 (uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC111454602 PE=4 SV=1)

HSP 1 Score: 376 bits (966), Expect = 4.10e-131
Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRR VVDSALADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLSKAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. ExPASy TrEMBL
Match: A0A6J1KRQ5 (uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615 PE=4 SV=1)

HSP 1 Score: 376 bits (965), Expect = 5.83e-131
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLSNEERGDALYKRAELKMSTNRRAVVDSA+ADLTESVTLSQNANAYCWLGKCYEMKKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           RGEAKKAYEEALNIEPRLSKAREALERLS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. ExPASy TrEMBL
Match: A0A5A7VBU3 (TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004320 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 4.69e-121
Identity = 196/211 (92.89%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYEMKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. ExPASy TrEMBL
Match: A0A1S3BC86 (uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 4.69e-121
Identity = 196/211 (92.89%), Postives = 205/211 (97.16%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYEMKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. ExPASy TrEMBL
Match: A0A0A0LPL8 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 1.74e-119
Identity = 195/211 (92.42%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180
           KSLS+EERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLSQNAN+Y WLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211
           R EAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of Cp4.1LG07g01710 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 87/196 (44.39%), Postives = 132/196 (67.35%), Query Frame = 0


Query: 4   DILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSAPSR 63
           + ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P +
Sbjct: 5   ETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPKK 64

Query: 64  SSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAAKSL 123
           S + SLA+  + EAD  IA+ P DAA HI++ALALD+ G  TSAL+S D AL+    KSL
Sbjct: 65  SQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKSL 124

Query: 124 SNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTL---SQNANAYCWLGKCYEMKKL 183
           S  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K L
Sbjct: 125 SVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKGL 184

Query: 184 RGEAKKAYEEALNIEP 197
           + +A+ A+ EAL  +P
Sbjct: 185 KEKAQWAFNEALKAQP 200

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g01710 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g01710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537835.1	2.08e-131	100.00	uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]	[more]
XP_022951869.1	8.48e-131	99.53	uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothet...	[more]
XP_023002879.1	1.20e-130	99.05	uncharacterized protein LOC111496615 [Cucurbita maxima]	[more]
KAG7020255.1	2.43e-130	99.05	hypothetical protein SDJN02_16938, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038884950.1	1.18e-121	93.36	uncharacterized protein LOC120075535 [Benincasa hispida]	[more]

BLAST of Cp4.1LG07g01710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GK03	4.10e-131	99.53	uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1KRQ5	5.83e-131	99.05	uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615...	[more]
A0A5A7VBU3	4.69e-121	92.89	TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S3BC86	4.69e-121	92.89	uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=...	[more]
A0A0A0LPL8	1.74e-119	92.42	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 ...	[more]

BLAST of Cp4.1LG07g01710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	2.3e-34	44.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 146..210 e-value: 2.0E-8 score: 36.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 28..145 e-value: 6.8E-6 score: 28.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..199
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 4..208
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 4..208
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 165..198 score: 9.2339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g01710.1	Cp4.1LG07g01710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity