Cp4.1LG07g01500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGGGAACGAACCACTCCTTACATGATCTTGGTTTTCAAATCTTTTTAAACTCCATCATCTTCTCTAAGTTCTAAGTCCCAAGAAACCCAATGATTCCTCAAGAAATGGACGCATACATCAAAGAATCAATCGACCACACACTGGGCCTCCCCGTCTCCACCCAAACGCTGGCTCTCAAACTCGCCGCCTCCGAAGCCACCCAGCGCCGCCTCGAAGCCCAATGCCTCTCTTTACAGTCTAAATTAAACCAACACATCCGCTCAACCAAAGCCGCGCAGGTTCGAACCTTAANATTCACTGTTACCGTTGCTATCTTATTTCCTCAGGTGATAAGAGTTTTTTTTTTTTTTTTTTTTTTTTCATAATCTATGGGTTTTGGTTGGTTCAGGCGGAAGCGATGATGAGCGCGCAAGGCTTGAAGAAGGCGATCGAGAGAAATGAACGATTAAGCAAAGAGAATTCACGTTTGGAGGATCAATTGAAGAAAATGAAAGTCATTGCAAGTAAAGGGCAAATGGCTATCCATGTCGCCAAGCAGGCGGAAGATCGTGCGCGTAAGTTGAACAATGAGGCTACAAAATTAACCGAGGATTTGAATTTCTTTAAAGAACAACACCAAATGCGAAAGGTGAGGTTAATTTAGATCGTTCTTTAATCTTTTGTTAGGAATCACAACCCTCCACAATGGTATGATAATGTGATATTGTCTACCTTGAGCATAAGCAAAAGAATCAATTAGCCAACGTGGGACCCTCCCAACAATCCTCCCCTTAAACAAAGTACACCACCGAGCCTCCCTCGAGGCCTATGGAACCCCTCAAACGTGGGACCCTCCCAACAATTCTCAACAATCTTCCCCTTAAACAAAGTACACCATAGATCCTCCATCGAGCCTATGGAACCCCTTGAACAGTCTTCCCTTAATCGAGGCCCCAAAAGGCAAAAGAATTAATTAGCCAACGTGGGATCCTCCCAACAATCTTCCCCTCGAACAAAGTACATTGTAGAGCTTCCCTTGAGGCTTATTGAGTCCCTCGAACAGCCTCCCCTTAATTGAGGCTCAACTCCTTTTTGAGTTTGATTCGATTTCGTTGCAGTTTTCCTTCGCTTCCATGGAGGAGGTTCTGGTCGAGACGGCTTTAAATGATTTGGTTCCTGGGGATACCGGTTTGACCGTTGGCCAGTTCTTGGTGGCGAACATGAACAACGAATCGTGTCGAAGATTGCTACATTTGTCGCAGAGCTTAAGGCCTTCAACTCACAGAGCTCTGTCTCTGGCTGCTCAAATCAAGACCCTCGAGGAAAACAATCGACAGCTTCAGATTCGCCTCTCGGTAGCACAAGGGGAGGTGAGATTTCATGAAAGATTTAAACTTTTGACCTCTCGATCAAAACCCATTTCATAAAACGGTTCGTACTTTTCTGGTATTGTTGTTATTAAGGTCATACTATTGTCGGATGAGATTGGTCGGCTGTTGGAGGACAAAGAAGACAGCAGACCAGACCCAGATTTTGCCAGGAAACCACCGGCTAGTAGTTCATCCGTGAAGGTTGAGAAAAATGAATGGAATGGCTGTAACTTGTTCAAGCAGTTTGTGATTGTTGTCTGTTTTTGTATGATTGTTTATTATTTTTATTTACGTTGACTTCCTAGAACCATGAGTTGTGTCAACGGTATTTGACTTTTGCAGTTGCGTCAAAACAAAAGACCAAGGGAATCGTCGAAGTCGGAAGATTGATTGTGGCTTCATTGTCCTTCATGTTTAGGCCCCTTTTCTTATGGATAATTAGGAATGTAC CAGGGGAACGAACCACTCCTTACATGATCTTGGTTTTCAAATCTTTTTAAACTCCATCATCTTCTCTAAGTTCTAAGTCCCAAGAAACCCAATGATTCCTCAAGAAATGGACGCATACATCAAAGAATCAATCGACCACACACTGGGCCTCCCCGTCTCCACCCAAACGCTGGCTCTCAAACTCGCCGCCTCCGAAGCCACCCAGCGCCGCCTCGAAGCCCAATGCCTCTCTTTACAGTCTAAATTAAACCAACACATCCGCTCAACCAAAGCCGCGCAGGCGGAAGCGATGATGAGCGCGCAAGGCTTGAAGAAGGCGATCGAGAGAAATGAACGATTAAGCAAAGAGAATTCACGTTTGGAGGATCAATTGAAGAAAATGAAAGTCATTGCAAGTAAAGGGCAAATGGCTATCCATGTCGCCAAGCAGGCGGAAGATCGTGCGCGTAAATTGCTACATTTGTCGCAGAGCTTAAGGCCTTCAACTCACAGAGCTCTGTCTCTGGCTGCTCAAATCAAGACCCTCGAGGAAAACAATCGACAGCTTCAGATTCGCCTCTCGGTAGCACAAGGGGAGGTCATACTATTGTCGGATGAGATTGGTCGGCTGTTGGAGGACAAAGAAGACAGCAGACCAGACCCAGATTTTGCCAGGAAACCACCGGCTAGTAGTTCATCCGTGAAGTTGCGTCAAAACAAAAGACCAAGGGAATCGTCGAAGTCGGAAGATTGATTGTGGCTTCATTGTCCTTCATGTTTAGGCCCCTTTTCTTATGGATAATTAGGAATGTAC ATGATTCCTCAAGAAATGGACGCATACATCAAAGAATCAATCGACCACACACTGGGCCTCCCCGTCTCCACCCAAACGCTGGCTCTCAAACTCGCCGCCTCCGAAGCCACCCAGCGCCGCCTCGAAGCCCAATGCCTCTCTTTACAGTCTAAATTAAACCAACACATCCGCTCAACCAAAGCCGCGCAGGCGGAAGCGATGATGAGCGCGCAAGGCTTGAAGAAGGCGATCGAGAGAAATGAACGATTAAGCAAAGAGAATTCACGTTTGGAGGATCAATTGAAGAAAATGAAAGTCATTGCAAGTAAAGGGCAAATGGCTATCCATGTCGCCAAGCAGGCGGAAGATCGTGCGCGTAAATTGCTACATTTGTCGCAGAGCTTAAGGCCTTCAACTCACAGAGCTCTGTCTCTGGCTGCTCAAATCAAGACCCTCGAGGAAAACAATCGACAGCTTCAGATTCGCCTCTCGGTAGCACAAGGGGAGGTCATACTATTGTCGGATGAGATTGGTCGGCTGTTGGAGGACAAAGAAGACAGCAGACCAGACCCAGATTTTGCCAGGAAACCACCGGCTAGTAGTTCATCCGTGAAGTTGCGTCAAAACAAAAGACCAAGGGAATCGTCGAAGTCGGAAGATTGA MIPQEMDAYIKESIDHTLGLPVSTQTLALKLAASEATQRRLEAQCLSLQSKLNQHIRSTKAAQAEAMMSAQGLKKAIERNERLSKENSRLEDQLKKMKVIASKGQMAIHVAKQAEDRARKLLHLSQSLRPSTHRALSLAAQIKTLEENNRQLQIRLSVAQGEVILLSDEIGRLLEDKEDSRPDPDFARKPPASSSSVKLRQNKRPRESSKSED Homology
BLAST of Cp4.1LG07g01500 vs. NCBI nr
Match: KAG6585310.1 (hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 328 bits (842), Expect = 1.35e-110 Identity = 206/296 (69.59%), Postives = 210/296 (70.95%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. NCBI nr
Match: KAG7020228.1 (hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 318 bits (816), Expect = 1.02e-106 Identity = 201/291 (69.07%), Postives = 205/291 (70.45%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. NCBI nr
Match: XP_023538594.1 (uncharacterized protein LOC111799313 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232 bits (592), Expect = 7.90e-74 Identity = 147/212 (69.34%), Postives = 147/212 (69.34%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. NCBI nr
Match: XP_022951817.1 (uncharacterized protein LOC111454550 [Cucurbita moschata]) HSP 1 Score: 211 bits (537), Expect = 1.75e-65 Identity = 137/212 (64.62%), Postives = 140/212 (66.04%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. NCBI nr
Match: XP_023002877.1 (uncharacterized protein LOC111496613 [Cucurbita maxima]) HSP 1 Score: 163 bits (413), Expect = 8.02e-48 Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. ExPASy TrEMBL
Match: A0A6J1GIQ2 (uncharacterized protein LOC111454550 OS=Cucurbita moschata OX=3662 GN=LOC111454550 PE=4 SV=1) HSP 1 Score: 211 bits (537), Expect = 8.47e-66 Identity = 137/212 (64.62%), Postives = 140/212 (66.04%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. ExPASy TrEMBL
Match: A0A6J1KKT5 (uncharacterized protein LOC111496613 OS=Cucurbita maxima OX=3661 GN=LOC111496613 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 3.88e-48 Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. ExPASy TrEMBL
Match: A0A6J1BRI9 (uncharacterized protein LOC111004753 OS=Momordica charantia OX=3673 GN=LOC111004753 PE=4 SV=1) HSP 1 Score: 149 bits (376), Expect = 1.19e-40 Identity = 113/268 (42.16%), Postives = 145/268 (54.10%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. ExPASy TrEMBL
Match: A0A2I4GQJ3 (intracellular protein transport protein USO1-like OS=Juglans regia OX=51240 GN=LOC109009952 PE=4 SV=1) HSP 1 Score: 100 bits (250), Expect = 1.11e-21 Identity = 83/247 (33.60%), Postives = 115/247 (46.56%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. ExPASy TrEMBL
Match: A0A2N9IYL3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58309 PE=4 SV=1) HSP 1 Score: 102 bits (253), Expect = 2.52e-21 Identity = 85/257 (33.07%), Postives = 119/257 (46.30%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. TAIR 10
Match: AT1G14680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 4.9e-13 Identity = 74/271 (27.31%), Postives = 117/271 (43.17%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. TAIR 10
Match: AT4G09060.1 (unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 4.9e-13 Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 0
BLAST of Cp4.1LG07g01500 vs. TAIR 10
Match: AT4G09060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1). ) HSP 1 Score: 72.4 bits (176), Expect = 4.9e-13 Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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