Cp4.1LG07g01050 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g01050
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG07: 525149 .. 525529 (-)
RNA-Seq ExpressionCp4.1LG07g01050
SyntenyCp4.1LG07g01050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATACCCATGTTTTCTTTCTTTTCGTTTCAGGTTTAGAATACAAAGACGTAGCTCAAGCTCGAGATAGTTTTGCTTCACGTGAAAAGGTACGTGAATATCTACCCTAATTGGACTCGAGGATTCATATATATCAATAATCTCGCTCACTTTTTCCTTAGGAACTTTTGAGCAACAACATTGGAGGAAGAAGAAGATTGGAAGTGAAAGAAGGTATGCCATTGGAAAGTAGCAAGAGCTCAAAAATGGCTGTTCCAAGCTCTTTCAATGGTGAAAATGGCAAGAAGAAGAAGAAGAAGAAATTGGGGAATGGTTCTTCATTAGTTTATGAAAATGCTGATTATTTGACTCATATGCATCACCCACCAAAACATAATTGA

mRNA sequence

ATGAATACCCATGTTTTCTTTCTTTTCGTTTCAGGTTTAGAATACAAAGACGTAGCTCAAGCTCGAGATAGTTTTGCTTCACGTGAAAAGGAACTTTTGAGCAACAACATTGGAGGAAGAAGAAGATTGGAAGTGAAAGAAGGTATGCCATTGGAAAGTAGCAAGAGCTCAAAAATGGCTGTTCCAAGCTCTTTCAATGGTGAAAATGGCAAGAAGAAGAAGAAGAAGAAATTGGGGAATGGTTCTTCATTAGTTTATGAAAATGCTGATTATTTGACTCATATGCATCACCCACCAAAACATAATTGA

Coding sequence (CDS)

ATGAATACCCATGTTTTCTTTCTTTTCGTTTCAGGTTTAGAATACAAAGACGTAGCTCAAGCTCGAGATAGTTTTGCTTCACGTGAAAAGGAACTTTTGAGCAACAACATTGGAGGAAGAAGAAGATTGGAAGTGAAAGAAGGTATGCCATTGGAAAGTAGCAAGAGCTCAAAAATGGCTGTTCCAAGCTCTTTCAATGGTGAAAATGGCAAGAAGAAGAAGAAGAAGAAATTGGGGAATGGTTCTTCATTAGTTTATGAAAATGCTGATTATTTGACTCATATGCATCACCCACCAAAACATAATTGA

Protein sequence

MNTHVFFLFVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMAVPSSFNGENGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN
Homology
BLAST of Cp4.1LG07g01050 vs. NCBI nr
Match: KAG6585262.1 (hypothetical protein SDJN03_17995, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (480), Expect = 3.02e-60
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0

Query: 1   MNTHVFFLFVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMA 60
           MNTHVFFLFVSGLEYKDV QARDSFASREKEL+SNNIGGRRRLEVKEGMPLESSKSSKMA
Sbjct: 1   MNTHVFFLFVSGLEYKDVVQARDSFASREKELVSNNIGGRRRLEVKEGMPLESSKSSKMA 60

Query: 61  VPSSFNGENGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 102
           V SSFNGENGKKKKKK LGNGSSLVYENADYLTHMHHPPKHN
Sbjct: 61  VSSSFNGENGKKKKKK-LGNGSSLVYENADYLTHMHHPPKHN 101

BLAST of Cp4.1LG07g01050 vs. NCBI nr
Match: XP_022951917.1 (uncharacterized protein LOC111454657 [Cucurbita moschata])

HSP 1 Score: 174 bits (440), Expect = 6.30e-54
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 0

Query: 9   FVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMAVPSSFNGE 68
           F  GLEYKDVAQARDSFASREKEL+SNNIGGRRRLEVKEGMPLE SKSSKMAV SSFNGE
Sbjct: 24  FHRGLEYKDVAQARDSFASREKELVSNNIGGRRRLEVKEGMPLERSKSSKMAVSSSFNGE 83

Query: 69  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 102
           NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN
Sbjct: 84  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 117

BLAST of Cp4.1LG07g01050 vs. NCBI nr
Match: XP_023002074.1 (uncharacterized protein LOC111496054 [Cucurbita maxima])

HSP 1 Score: 168 bits (425), Expect = 1.18e-51
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0

Query: 9   FVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMAVPSSFNGE 68
           F  GLEYKDVAQARDSFAS EKELLSNNIGGRRRLEV+EGMPLESSKSSKMAVPSSFNGE
Sbjct: 24  FHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEVQEGMPLESSKSSKMAVPSSFNGE 83

Query: 69  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 102
           NGKKKKKK  GNGSSLVYENADYLTHMHHPPKHN
Sbjct: 84  NGKKKKKKS-GNGSSLVYENADYLTHMHHPPKHN 116

BLAST of Cp4.1LG07g01050 vs. NCBI nr
Match: KAG7020185.1 (hypothetical protein SDJN02_16868, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 166 bits (421), Expect = 4.81e-51
Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 0

Query: 9   FVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMAVPSSFNGE 68
           F  GLEYKDV Q RDSFASREKEL+SNNIGGRRRLEVKEGMPLESSKSSKMAV SSFNGE
Sbjct: 24  FHRGLEYKDVVQTRDSFASREKELVSNNIGGRRRLEVKEGMPLESSKSSKMAVSSSFNGE 83

Query: 69  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 102
           NGKKKKKK LGNGSSLVYENADYLTHMHHPPKHN
Sbjct: 84  NGKKKKKK-LGNGSSLVYENADYLTHMHHPPKHN 116

BLAST of Cp4.1LG07g01050 vs. NCBI nr
Match: XP_031743130.1 (uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 5.09e-16
Identity = 56/110 (50.91%), Postives = 67/110 (60.91%), Query Frame = 0

Query: 14  EYKDVAQARDSFASREKELL-SNNIGGRRRLEVKEGMPLESSKS----------SKMAVP 73
           E KDVA+  D   S + ELL +NNIGGRR    KE M +E+SKS          S M   
Sbjct: 28  EDKDVAE--DRVGSLKMELLRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFS 87

Query: 74  SSFNGENGKKKKKKK---------LG-NGSSLVYENADYLTHMHHPPKHN 102
           S+ N ENGKKK KKK         +G +GS++VY NADYLT+MHHPPKHN
Sbjct: 88  SASNEENGKKKNKKKEVSSLETKKMGISGSTVVYNNADYLTYMHHPPKHN 135

BLAST of Cp4.1LG07g01050 vs. ExPASy TrEMBL
Match: A0A6J1GIZ1 (uncharacterized protein LOC111454657 OS=Cucurbita moschata OX=3662 GN=LOC111454657 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 3.05e-54
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 0

Query: 9   FVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMAVPSSFNGE 68
           F  GLEYKDVAQARDSFASREKEL+SNNIGGRRRLEVKEGMPLE SKSSKMAV SSFNGE
Sbjct: 24  FHRGLEYKDVAQARDSFASREKELVSNNIGGRRRLEVKEGMPLERSKSSKMAVSSSFNGE 83

Query: 69  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 102
           NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN
Sbjct: 84  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 117

BLAST of Cp4.1LG07g01050 vs. ExPASy TrEMBL
Match: A0A6J1KPF0 (uncharacterized protein LOC111496054 OS=Cucurbita maxima OX=3661 GN=LOC111496054 PE=4 SV=1)

HSP 1 Score: 168 bits (425), Expect = 5.72e-52
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0

Query: 9   FVSGLEYKDVAQARDSFASREKELLSNNIGGRRRLEVKEGMPLESSKSSKMAVPSSFNGE 68
           F  GLEYKDVAQARDSFAS EKELLSNNIGGRRRLEV+EGMPLESSKSSKMAVPSSFNGE
Sbjct: 24  FHRGLEYKDVAQARDSFASHEKELLSNNIGGRRRLEVQEGMPLESSKSSKMAVPSSFNGE 83

Query: 69  NGKKKKKKKLGNGSSLVYENADYLTHMHHPPKHN 102
           NGKKKKKK  GNGSSLVYENADYLTHMHHPPKHN
Sbjct: 84  NGKKKKKKS-GNGSSLVYENADYLTHMHHPPKHN 116

BLAST of Cp4.1LG07g01050 vs. ExPASy TrEMBL
Match: A0A0A0KHA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401420 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.60e-14
Identity = 47/91 (51.65%), Postives = 56/91 (61.54%), Query Frame = 0

Query: 32  LLSNNIGGRRRLEVKEGMPLESSKS----------SKMAVPSSFNGENGKKKKKKK---- 91
           L +NNIGGRR    KE M +E+SKS          S M   S+ N ENGKKK KKK    
Sbjct: 4   LRNNNIGGRRLGAAKEFMEMENSKSFGKNGSKEKISNMVFSSASNEENGKKKNKKKEVSS 63

Query: 92  -----LG-NGSSLVYENADYLTHMHHPPKHN 102
                +G +GS++VY NADYLT+MHHPPKHN
Sbjct: 64  LETKKMGISGSTVVYNNADYLTYMHHPPKHN 94

BLAST of Cp4.1LG07g01050 vs. ExPASy TrEMBL
Match: A0A1S3BDD4 (uncharacterized protein LOC103488445 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488445 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.65e-11
Identity = 51/112 (45.54%), Postives = 60/112 (53.57%), Query Frame = 0

Query: 14  EYKDVAQARDSFASREKELLSNNIGGRRRLEV--KEGMPLESSKS----------SKMAV 73
           E KD A+ R      E  L +NNIGGRR L V  KE M +E+SKS          S M  
Sbjct: 28  EDKDAAEDRVGSLKMEP-LRNNNIGGRR-LGVLNKELMEMENSKSFGKNGSKEKTSNMVF 87

Query: 74  PSSFNGENGKKKKKKK-----------LGNGSSLVYENADYLTHMHHPPKHN 102
            S+ N ENGKKK  KK           +   + +VY NADYLT+MHHPPKHN
Sbjct: 88  SSAANEENGKKKNDKKKVSSLETKKMGISGSTVVVYNNADYLTYMHHPPKHN 137

BLAST of Cp4.1LG07g01050 vs. ExPASy TrEMBL
Match: A0A1S3BDI1 (uncharacterized protein LOC103488445 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488445 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.41e-11
Identity = 48/110 (43.64%), Postives = 57/110 (51.82%), Query Frame = 0

Query: 16  KDVAQARDSFASREKELLSNNIGGRRRLEV--KEGMPLESSKS----------SKMAVPS 75
           +D   A D   S + E L NN  G RRL V  KE M +E+SKS          S M   S
Sbjct: 27  QDKDAAEDRVGSLKMEPLRNNNIGGRRLGVLNKELMEMENSKSFGKNGSKEKTSNMVFSS 86

Query: 76  SFNGENGKKKKKKK-----------LGNGSSLVYENADYLTHMHHPPKHN 102
           + N ENGKKK  KK           +   + +VY NADYLT+MHHPPKHN
Sbjct: 87  AANEENGKKKNDKKKVSSLETKKMGISGSTVVVYNNADYLTYMHHPPKHN 136

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585262.13.02e-6096.08hypothetical protein SDJN03_17995, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022951917.16.30e-5494.68uncharacterized protein LOC111454657 [Cucurbita moschata][more]
XP_023002074.11.18e-5193.62uncharacterized protein LOC111496054 [Cucurbita maxima][more]
KAG7020185.14.81e-5192.55hypothetical protein SDJN02_16868, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_031743130.15.09e-1650.91uncharacterized protein LOC105435861 isoform X1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1GIZ13.05e-5494.68uncharacterized protein LOC111454657 OS=Cucurbita moschata OX=3662 GN=LOC1114546... [more]
A0A6J1KPF05.72e-5293.62uncharacterized protein LOC111496054 OS=Cucurbita maxima OX=3661 GN=LOC111496054... [more]
A0A0A0KHA31.60e-1451.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401420 PE=4 SV=1[more]
A0A1S3BDD44.65e-1145.54uncharacterized protein LOC103488445 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BDI16.41e-1143.64uncharacterized protein LOC103488445 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..81

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g01050.1Cp4.1LG07g01050.1mRNA