Cp4.1LG06g10230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g10230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pathogenesis-related protein 1-like
Location	Cp4.1LG06: 10651817 .. 10652302 (-)
RNA-Seq Expression	Cp4.1LG06g10230
Synteny	Cp4.1LG06g10230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATGCTAAAACTCTATTTATCTCTCTTTTATGTTTTGAGTATCACCGTATTTTCTTTCTCTTTTGGTCAAGATCTACCTCGAGACTATGTTGATGCTCACAATGTTGTTCGTGCCCAAGTGGGTGTCGAGCCTATCCAGTGGGATGAGAAACTAGCAAACTATGCTACGCAATATGCTAACAAACGTAGTAGTGATTGCCTACTATTGCACTCTCATGGGCCTTATGGAGAGAATCTTGCAATAAGTACCGGTGAAATGTCTGGCATTGAAGCAGTTCAAATGTGGGTGGATGAAGAACAATTCTATGATTATAACTCCAATACATGCGTTGATGACGAAATGTGTAGCCACTACACTCAAGTGGTATGGAGGAATTCGATGAGAGTTGGATGTGCGAAAGTTAGCTGTAACAATGAAGGTACATTCATCATTTGCAGTTATGATCCACCTGGCAATTTCATAGGCGAGTGGCCATACTAA

mRNA sequence

ATGAGTATGCTAAAACTCTATTTATCTCTCTTTTATGTTTTGAGTATCACCGTATTTTCTTTCTCTTTTGGTCAAGATCTACCTCGAGACTATGTTGATGCTCACAATGTTGTTCGTGCCCAAGTGGGTGTCGAGCCTATCCAGTGGGATGAGAAACTAGCAAACTATGCTACGCAATATGCTAACAAACGTAGTAGTGATTGCCTACTATTGCACTCTCATGGGCCTTATGGAGAGAATCTTGCAATAAGTACCGGTGAAATGTCTGGCATTGAAGCAGTTCAAATGTGGGTGGATGAAGAACAATTCTATGATTATAACTCCAATACATGCGTTGATGACGAAATGTGTAGCCACTACACTCAAGTGGTATGGAGGAATTCGATGAGAGTTGGATGTGCGAAAGTTAGCTGTAACAATGAAGGTACATTCATCATTTGCAGTTATGATCCACCTGGCAATTTCATAGGCGAGTGGCCATACTAA

Coding sequence (CDS)

ATGAGTATGCTAAAACTCTATTTATCTCTCTTTTATGTTTTGAGTATCACCGTATTTTCTTTCTCTTTTGGTCAAGATCTACCTCGAGACTATGTTGATGCTCACAATGTTGTTCGTGCCCAAGTGGGTGTCGAGCCTATCCAGTGGGATGAGAAACTAGCAAACTATGCTACGCAATATGCTAACAAACGTAGTAGTGATTGCCTACTATTGCACTCTCATGGGCCTTATGGAGAGAATCTTGCAATAAGTACCGGTGAAATGTCTGGCATTGAAGCAGTTCAAATGTGGGTGGATGAAGAACAATTCTATGATTATAACTCCAATACATGCGTTGATGACGAAATGTGTAGCCACTACACTCAAGTGGTATGGAGGAATTCGATGAGAGTTGGATGTGCGAAAGTTAGCTGTAACAATGAAGGTACATTCATCATTTGCAGTTATGATCCACCTGGCAATTTCATAGGCGAGTGGCCATACTAA

Protein sequence

MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY

Homology

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 9.2e-49
Identity = 89/162 (54.94%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 2   SMLKLYLSLFYVLSITVFSFSF-GQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 61
           S L  +L +  +L   V S S   Q+  +DY+DAHN  RA VGVEP+ WD+++A YA  Y
Sbjct: 7   SQLPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNY 66

Query: 62  ANKRSSDCLLLHSHGPYGENLAISTGE-MSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSH 121
           A++ ++DC L+HSHG YGENLA  +G+ M+  +AV+MWVDE+Q+YD++SNTC   ++C H
Sbjct: 67  ASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGH 126

Query: 122 YTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           YTQVVWRNS+RVGCA+V CNN G  + C+YDPPGN+ GE PY
Sbjct: 127 YTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.9e-48
Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 25  QDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDCLLLHSHGPYGENLAIS 84
           QD  +DYV+AHN  R+Q+GV P+QWDE LA YA  YAN+   DC L+HS GPYGENLA S
Sbjct: 27  QDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS 86

Query: 85  TGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNSMRVGCAKVSCNNEGTF 144
            G++SG+ AV +WV+E+  Y+Y++NTC  + +C HYTQVVWRNS+R+GCAKV CNN GT 
Sbjct: 87  GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTI 146

Query: 145 IICSYDPPGNFIGEWPY 162
           I C+YDPPGN+  + PY
Sbjct: 147 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-48
Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 0


Query: 3   MLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYAN 62
           M   +L    +L + +   S  Q+  +DY+DAHN  RA VGVEP+ WD  +A YA  Y +
Sbjct: 9   MPSFFLVSTLLLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVS 68

Query: 63  KRSSDCLLLHSHGPYGENLAISTGE-MSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYT 122
           + ++DC L+HSHG YGENLA  +G+ M+  +AV+MWVDE+Q+YD++SNTC   ++C HYT
Sbjct: 69  QLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYT 128

Query: 123 QVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           QVVWRNS+RVGCA+V CNN G  + C+YDPPGN IG+ PY
Sbjct: 129 QVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 7.8e-48
Identity = 88/161 (54.66%), Postives = 116/161 (72.05%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           M  L   ++ F   +I + S S  Q+ P+DY++ HN  R QVGV P+ WD +LA YA  Y
Sbjct: 1   MGFLTTIVACFITFAILIHS-SKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           AN+R  DC ++HSHGPYGENLA +  +++   AV+MWVDE++FYDYNSN+CV   +C HY
Sbjct: 61  ANQRIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGG-VCGHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           TQVVWRNS+R+GCA+V  NN   FI C+YDPPGNFIG+ P+
Sbjct: 121 TQVVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 187.2 bits (474), Expect = 1.5e-46
Identity = 82/160 (51.25%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 3   MLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYAN 62
           M   +L    +L + +      Q+  +DY+DAHN  RA VGVEP+ WD+++A YA  YA+
Sbjct: 9   MSSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYAS 68

Query: 63  KRSSDCLLLHSHGPYGENLAISTGE-MSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYT 122
           + ++DC L+HSHG YGENLA  +G+ ++  +AV+MWV+E+Q+Y ++SNTC   ++C HYT
Sbjct: 69  QLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYT 128

Query: 123 QVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           QVVWRNS+RVGCA+V CNN G  + C+YDPPGN IG+ PY
Sbjct: 129 QVVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: XP_023536579.1 (pathogenesis-related protein 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339 bits (870), Expect = 8.21e-118
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY
Sbjct: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY
Sbjct: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY
Sbjct: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: XP_022925422.1 (pathogenesis-related protein 1A-like [Cucurbita moschata])

HSP 1 Score: 311 bits (796), Expect = 1.59e-106
Identity = 146/161 (90.68%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           M M KL LSLFYVLSIT+FSFS GQDLP+DYVDAHNVVRAQVGVEPIQWD++LANYATQY
Sbjct: 1   MGMPKLSLSLFYVLSITIFSFSLGQDLPQDYVDAHNVVRAQVGVEPIQWDQELANYATQY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           ANKR SDCLLLHSHGPYGENLA+S GEMSGIEAVQMWVDEEQFYDY+SNTCVDDEMCSHY
Sbjct: 61  ANKRRSDCLLLHSHGPYGENLAMSIGEMSGIEAVQMWVDEEQFYDYDSNTCVDDEMCSHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           TQVVWRNSMRVGCAKVSCNN   FIICSYDPPGNFIGEWPY
Sbjct: 121 TQVVWRNSMRVGCAKVSCNNRDAFIICSYDPPGNFIGEWPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: XP_022973950.1 (pathogenesis-related protein 1B-like [Cucurbita maxima])

HSP 1 Score: 308 bits (788), Expect = 2.64e-105
Identity = 145/161 (90.06%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           MSMLKL  SLFYVLSIT+FSFS GQDLPRDYVDAHNVVRAQVGVEPIQWDE+LANYA QY
Sbjct: 1   MSMLKLSWSLFYVLSITIFSFSLGQDLPRDYVDAHNVVRAQVGVEPIQWDEELANYAMQY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           A+KRSSDCLLLHS+GPYGENLA+STGEM GIE VQMWVDEEQFYDY+SNTCVDDEMC HY
Sbjct: 61  ADKRSSDCLLLHSYGPYGENLAMSTGEMFGIEGVQMWVDEEQFYDYDSNTCVDDEMCGHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           TQVVWRNSMRVGCAKVSCNN G FIICSYDPPGN IGEWPY
Sbjct: 121 TQVVWRNSMRVGCAKVSCNNRGVFIICSYDPPGNVIGEWPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: XP_023511466.1 (pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252 bits (643), Expect = 3.96e-83
Identity = 115/166 (69.28%), Postives = 138/166 (83.13%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQV-----GVEPIQWDEKLAN 60
           M ++K+ LSLF V  IT+ S S  QD P+DYVDAHN+ R+QV     G++PIQWDE+LAN
Sbjct: 1   MGLVKISLSLFCVFCITILSSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60

Query: 61  YATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE 120
           YATQYAN+RS+DC LLHS+GPYGENLA+ + EM+GIEAVQMWVDE+QFYDY SNTC + +
Sbjct: 61  YATQYANERSNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGK 120

Query: 121 MCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           MC HYTQVVW+N+ +VGCAKV CNN GTFI C+YDPPGN IGEWPY
Sbjct: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Cp4.1LG06g10230 vs. NCBI nr
Match: XP_022952615.1 (pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 249 bits (637), Expect = 3.25e-82
Identity = 112/166 (67.47%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQV-----GVEPIQWDEKLAN 60
           M ++K+  SLF +  IT+   S  QD P+DYVDAHN+ R+QV     G++PIQWDE+LAN
Sbjct: 1   MGLVKISFSLFCIFCITILPSSLAQDFPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60

Query: 61  YATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE 120
           YATQYAN+RS+DC LLHS+GPYGENLA+ + EM+GIEAVQMWVDE+QFYDY SNTC + +
Sbjct: 61  YATQYANERSNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGK 120

Query: 121 MCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           MC HYTQVVW+N+ +VGCAKV CNN GTFI C+YDPPGN IGEWPY
Sbjct: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy TrEMBL
Match: A0A6J1EBN4 (pathogenesis-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC111432718 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 7.69e-107
Identity = 146/161 (90.68%), Postives = 152/161 (94.41%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           M M KL LSLFYVLSIT+FSFS GQDLP+DYVDAHNVVRAQVGVEPIQWD++LANYATQY
Sbjct: 1   MGMPKLSLSLFYVLSITIFSFSLGQDLPQDYVDAHNVVRAQVGVEPIQWDQELANYATQY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           ANKR SDCLLLHSHGPYGENLA+S GEMSGIEAVQMWVDEEQFYDY+SNTCVDDEMCSHY
Sbjct: 61  ANKRRSDCLLLHSHGPYGENLAMSIGEMSGIEAVQMWVDEEQFYDYDSNTCVDDEMCSHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           TQVVWRNSMRVGCAKVSCNN   FIICSYDPPGNFIGEWPY
Sbjct: 121 TQVVWRNSMRVGCAKVSCNNRDAFIICSYDPPGNFIGEWPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy TrEMBL
Match: A0A6J1ICN7 (pathogenesis-related protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111472574 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 1.28e-105
Identity = 145/161 (90.06%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           MSMLKL  SLFYVLSIT+FSFS GQDLPRDYVDAHNVVRAQVGVEPIQWDE+LANYA QY
Sbjct: 1   MSMLKLSWSLFYVLSITIFSFSLGQDLPRDYVDAHNVVRAQVGVEPIQWDEELANYAMQY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHY 120
           A+KRSSDCLLLHS+GPYGENLA+STGEM GIE VQMWVDEEQFYDY+SNTCVDDEMC HY
Sbjct: 61  ADKRSSDCLLLHSYGPYGENLAMSTGEMFGIEGVQMWVDEEQFYDYDSNTCVDDEMCGHY 120

Query: 121 TQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           TQVVWRNSMRVGCAKVSCNN G FIICSYDPPGN IGEWPY
Sbjct: 121 TQVVWRNSMRVGCAKVSCNNRGVFIICSYDPPGNVIGEWPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy TrEMBL
Match: A0A6J1GMA0 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455250 PE=4 SV=1)

HSP 1 Score: 249 bits (637), Expect = 1.57e-82
Identity = 112/166 (67.47%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQV-----GVEPIQWDEKLAN 60
           M ++K+  SLF +  IT+   S  QD P+DYVDAHN+ R+QV     G++PIQWDE+LAN
Sbjct: 1   MGLVKISFSLFCIFCITILPSSLAQDFPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60

Query: 61  YATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE 120
           YATQYAN+RS+DC LLHS+GPYGENLA+ + EM+GIEAVQMWVDE+QFYDY SNTC + +
Sbjct: 61  YATQYANERSNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGK 120

Query: 121 MCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           MC HYTQVVW+N+ +VGCAKV CNN GTFI C+YDPPGN IGEWPY
Sbjct: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy TrEMBL
Match: A0A6J1GL40 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455249 PE=4 SV=1)

HSP 1 Score: 249 bits (636), Expect = 2.23e-82
Identity = 111/166 (66.87%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQV-----GVEPIQWDEKLAN 60
           M ++K+  SLF +  IT+   S  QD P+DYVDAHN+ R+QV     G++PIQWDE+LAN
Sbjct: 1   MGLVKISFSLFCIFCITILPSSLAQDFPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60

Query: 61  YATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE 120
           YAT+YAN+RS+DC LLHS+GPYGENLA+ + EM+GIEAVQMWVDE+QFYDY SNTC++ +
Sbjct: 61  YATEYANERSNDCQLLHSNGPYGENLAMHSSEMTGIEAVQMWVDEQQFYDYASNTCIEGK 120

Query: 121 MCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           MC HYTQVVW+N+ +VGCAKV CNN GTFI C+YDPPGN IGEWPY
Sbjct: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGTFITCNYDPPGNIIGEWPY 166

[Close]

BLAST of Cp4.1LG06g10230 vs. ExPASy TrEMBL
Match: A0A6J1GJF8 (pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454909 PE=4 SV=1)

HSP 1 Score: 248 bits (634), Expect = 4.50e-82
Identity = 113/166 (68.07%), Postives = 136/166 (81.93%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQV-----GVEPIQWDEKLAN 60
           M ++K+ LSLF V  IT+   S  QD P+DYVDAHN+ R+QV     G++PIQWDE+LAN
Sbjct: 1   MGLVKISLSLFCVFCITILPSSLAQDSPQDYVDAHNIARSQVSAVQVGIKPIQWDEELAN 60

Query: 61  YATQYANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE 120
           YATQYAN+RS+DC LLHS+GPYGENLA+ + EM+GIEAVQMWVDE+QFYDY SNTC + +
Sbjct: 61  YATQYANERSNDCQLLHSNGPYGENLAVHSSEMTGIEAVQMWVDEQQFYDYASNTCTEGK 120

Query: 121 MCSHYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 161
           MC HYTQVVW+N+ +VGCAKV CNN G FI C+YDPPGN IGEWPY
Sbjct: 121 MCGHYTQVVWQNTTKVGCAKVRCNNGGKFITCNYDPPGNVIGEWPY 166

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 4.8e-53
Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 0


Query: 2   SMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYA 61
           S   L+L++ + L + V   +  QD P+D++  HN  RA+VGV P++WDEK+A YA  YA
Sbjct: 6   SSQNLFLAITFFLVLIVHLKA--QDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYA 65

Query: 62  NKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYT 121
           N+R  DC + HS G YGEN+A S+G M+G+ AV MWVDE+  YDY+SNTC  D+ C HYT
Sbjct: 66  NQRKGDCAMKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYT 125

Query: 122 QVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           QVVWRNS R+GCAKV CNN  TFI C+YDPPGN++GEWPY
Sbjct: 126 QVVWRNSERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-52
Identity = 87/163 (53.37%), Postives = 129/163 (79.14%), Query Frame = 0


Query: 1   MSMLKLYLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQY 60
           MS+LK   ++ ++L+I +F  S  +DL + +++AHN  R +VG++P+ WD+++A YA  Y
Sbjct: 1   MSLLK--TNILFLLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASY 60

Query: 61  ANKRSSDCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDE--MCS 120
           AN+R +DC L+HS+GP+GEN+A+S+GEMS  +A +MW++E+Q+YDY+SNTC D     C 
Sbjct: 61  ANQRINDCALVHSNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCL 120

Query: 121 HYTQVVWRNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           HYTQVVW+N++R+GCAKV CN+ GTFI C+YDPPGN+IGE P+
Sbjct: 121 HYTQVVWKNTVRLGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 191.8 bits (486), Expect = 4.2e-49
Identity = 83/137 (60.58%), Postives = 106/137 (77.37%), Query Frame = 0


Query: 25  QDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSDCLLLHSHGPYGENLAIS 84
           QD  +DYV+AHN  R+Q+GV P+QWDE LA YA  YAN+   DC L+HS GPYGENLA S
Sbjct: 27  QDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS 86

Query: 85  TGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWRNSMRVGCAKVSCNNEGTF 144
            G++SG+ AV +WV+E+  Y+Y++NTC  + +C HYTQVVWRNS+R+GCAKV CNN GT 
Sbjct: 87  GGDLSGVAAVNLWVNEKANYNYDTNTC--NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTI 146

Query: 145 IICSYDPPGNFIGEWPY 162
           I C+YDPPGN+  + PY
Sbjct: 147 ISCNYDPPGNYANQKPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 7   YLSLFYVLSITVFSFSFGQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSS 66
           +L +F  L   +   S  QD P+DY+  HN  R  VGV P+QWDE++A YA  YA +   
Sbjct: 9   FLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRG 68

Query: 67  DCLLLHSHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVWR 126
           +C L+HS GPYGENLA  +G++SG+ AV MWV E+  Y+Y +NTC  + +C HYTQVVWR
Sbjct: 69  NCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC--NGVCGHYTQVVWR 128

Query: 127 NSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
            S+R+GCAKV CNN GT I C+YDP GN++ E PY
Sbjct: 129 KSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

[Close]

BLAST of Cp4.1LG06g10230 vs. TAIR 10
Match: AT5G26130.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45
Identity = 84/156 (53.85%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 13  VLSITVFSFSF-----GQDLPRDYVDAHNVVRAQVGVEPIQWDEKLANYATQYANKRSSD 72
           +LS+ V   +F      QD P+DY+D HN  R QVGV P++W      YA  YA +R  D
Sbjct: 11  ILSVIVLFLAFAVPLKAQDQPQDYLDEHNRARTQVGVPPMKWHAGAEQYAWNYAQQRKGD 70

Query: 73  CLLLH--SHGPYGENLAISTGEMSGIEAVQMWVDEEQFYDYNSNTCVDDEMCSHYTQVVW 132
           C L H  S+G YGENLA S G +SG EAV++WV+E+  Y Y SNTC D + C HYTQVVW
Sbjct: 71  CSLTHSNSNGLYGENLAWSGGALSGAEAVKLWVNEKSDYIYASNTCSDGKQCGHYTQVVW 130

Query: 133 RNSMRVGCAKVSCNNEGTFIICSYDPPGNFIGEWPY 162
           R S  VGCAKV C+N GTF+ C+Y PPGN+ G WPY
Sbjct: 131 RTSEWVGCAKVKCDNGGTFVTCNYYPPGNYRGRWPY 166

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g10230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08299	9.2e-49	54.94	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
Q9ZNS4	5.9e-48	60.58	Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1	[more]
P07053	7.8e-48	53.13	Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P11670	7.8e-48	54.66	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
P09042	1.5e-46	51.25	Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3	[more]

BLAST of Cp4.1LG06g10230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536579.1	8.21e-118	100.00	pathogenesis-related protein 1A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925422.1	1.59e-106	90.68	pathogenesis-related protein 1A-like [Cucurbita moschata]	[more]
XP_022973950.1	2.64e-105	90.06	pathogenesis-related protein 1B-like [Cucurbita maxima]	[more]
XP_023511466.1	3.96e-83	69.28	pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952615.1	3.25e-82	67.47	pathogenesis-related protein 1-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG06g10230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBN4	7.69e-107	90.68	pathogenesis-related protein 1A-like OS=Cucurbita moschata OX=3662 GN=LOC1114327...	[more]
A0A6J1ICN7	1.28e-105	90.06	pathogenesis-related protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111472574...	[more]
A0A6J1GMA0	1.57e-82	67.47	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145525...	[more]
A0A6J1GL40	2.23e-82	66.87	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145524...	[more]
A0A6J1GJF8	4.50e-82	68.07	pathogenesis-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145490...	[more]

BLAST of Cp4.1LG06g10230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33720.1	4.8e-53	57.50	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT3G19690.1	2.4e-52	53.37	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT2G14580.1	4.2e-49	60.58	basic pathogenesis-related protein 1	[more]
AT2G14610.1	2.2e-45	52.90	pathogenesis-related gene 1	[more]
AT5G26130.1	2.2e-45	53.85	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 93..106 score: 43.01 coord: 144..157 score: 50.15 coord: 117..133 score: 59.01 coord: 47..65 score: 35.18
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 19..161
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 26..157 e-value: 5.4E-58 score: 208.6
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 32..149 e-value: 4.7E-21 score: 75.9
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 27..161 e-value: 1.7E-44 score: 153.5
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 20..161
None	No IPR available	PANTHER	PTHR10334:SF488	PATHOGENESIS-RELATED PROTEIN 1	coord: 19..161
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 28..161 e-value: 2.85093E-84 score: 242.154
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 144..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g10230.1	Cp4.1LG06g10230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005576	extracellular region