Cp4.1LG06g10070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG06g10070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionagamous-like MADS-box protein AGL12
LocationCp4.1LG06: 10224939 .. 10231576 (-)
RNA-Seq ExpressionCp4.1LG06g10070
SyntenyCp4.1LG06g10070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGAAAGAAGAAAAAACAATGGAAAAGAAAGTTGGTGACTTTAGAGATTCAAAGATGAGAGTTATAATAAAATAAAAGAAAAAGAAACCATAGTGATGGATAAAGGTAAACTTAGTAAATTAAATTACCGACCAAATTATATTCTTTGAGACATTAAAAACAATGAAAGAAGTTATATAAAGGGTTTTGAATCCCATTAGATTGGTTTAAGGGTTTGTGAGTTTGAGAGGTTAAGAGAAGTAGAGATATTGCATTGACCGGAAGCTAGTTCAAACTAGTGGAAGGTTGGGTGCAGAGCAGCTGCTGCAGAGTTCAAGAAATTGGTTGAAATGGCTCGTGGGAAGGTTCAATTGAAGAGGATTGAGAACCCTGTGCACAGGCAAGTGACGTTCTGTAAGCGCCGAGCTGGGCTGCTTAAGAAGGCTAAGGAGCTGTCTGTGTTGTGCGATGCTGAAATTGGAGTCTTCATTTTCTCCGCCCATGGAAAGCTCTATGAACTCGCCACTAAAGGGTATTGCTTTTTCTTATTATCTTGTTCATCTTTGTTTTTTTAGCTCCAAATGTGTTAAAAAGCTAGGACGTTTGGTGGAGAGTATAATGTTTCGGTCAGTTAAGCTATGTTCAAGTTGATTTTTTTTTTTCTTTTATAAAAGTTCAAGCCCACCGAGAGCAGATAGAATGTTTCGTTCTCCTCTGCAACCGATATGGAATCTCATAATCCACCTTCCTTCGGGGGCCACCGTTCTTGCTATGATACCATTTGTAATAGCCGAAGCCCACTGCTAACAGATATGGTTCTATTTGGATTTTTTCTTTTGGGTTTCCCCTTACCGTTTTTAAAACGCGTCTGCTAGGGAGAGATTTCTACAACCTTATAAAAAATACTTGATCTCCTCCCCAACCGATGAGGGATCTCACAATCCACCCTCCTTCGAGGTCCAGCGTCCTCGCTTGCATTCGTTCCCTTCTCCAATCGACGTGGGACCCCTCCAATTCACCTCCTTTCGGGGCCCAACGTTCTTACTAGCACACCGCCTCGTTTCCATCCCCTTTCAGGGCTCAGCCTCCTCGCTGACATATCGCCCCGTGTTTGGCTCTAATACCATTTGTAACAAGATAAGTCCACCGCTATCAGATATTATCTTCTTTGGGTTTTCCCTTTCGAGTTTCCCCTTACGCTTTTTAAAACACGTCTGATAGGGACAGGTTTCCACACCCTTCTAAAAAATACTTGTTCTCCTCTCAACGGACATGGAATCTCACAATTTCTATATTTTGTTTTTTTGTTTAATTCAACTCATATTAGGATTGGTTTCGAATTTCTAACCTTTTCGTCAAGAGCATAATACTTGGACCAAGTAAACCTCTATCTTTTGAGTAAGAGTGAATACAGGTTGGGTTGAGAGAATCTTTTAAACCAACCCGAAATTTCGAGTTAGTTGGGTTGGTGTCCCGAGCAACTCGAATATAGCTCACAACCTAACTCAACGCACCTAGATTAGATTGGGTTGTAAATTATTTTACATTAATGACTAAAATCTCATAAAATTCAAATATTAAATATTCATAAGTCACAAAGCATCACTATCATCGATTACAAACTTCAAATATTCTTAATTTTCATAACAATCTTAAAAGTAGAGTATGATAGAGTACGATTGTAATCTTATTTTTCACGTCGTAACGGAAAAAATGTTAACTCAGCTAACCAACCTGAATGTTTTCTATTTTCTTATTATTCAATTCAATTTAAACTGAACAATCTAACACAACCCAACTTTAAACGATCCAGATTGATGGAGTTACAGATCATATAAACACTTCTAGTTTTAAATATTGGTTTGATCTCCCTTATTTAAATGTGGGAGTACAGAACCATGCAAGGGCTTATTGAAAGGTACATGAACCACACCAATGGGAGTCAGCCACCAGAGCCACCCATAGACAACCAAACCCTGGTACTCTCTTTTTCTTTCTCTTAATTTTTTTATTTATTTTATTTTTAGATGTGACAAAAGCTGATTAAACAACTAAATAATCTCCGTGATTAAACAACTAAATAATTCCGGTTTTTTCTCTCGCTCTTAACTGGGGTAGAGATGAGAGTAGGGAATATAATCTCGTCTCCGATTCCATTTATGAAAAAAAATGTTTTCTACTCTCTCCCATCGTTCGTCTAAACGAGGAATCCCTTCCCCGTTCGGACGAGTCCTTGCAAGACAGGTTAAGGGCAGGTTCTTACCGATAAAATCGACATCTCTATTTATGATTTAGTAATGATGACTATCTTTTAGATACATTATTTTATTTCATGAATTGAGAAGTGTGGTAGAAAGCACTACACAGCTAAAGAAATTATAAATAAAAAGCTGAAACTTTTTCTTTCTTTTACACAAAGTTATCAAAAGGGATCCTTGATTATTTAACAAATGACTTGGTTAATTAGGTCTCCATTATAGTTGTTAGGGTTAGAGTGTAAAGTCATGTATGATACAAAATAGAAGATATTTCATTTTAATCATATAAACATTTTAAATAGAAAACACCCAACTTAGCTCTAAGGCGTTCAAGTAGCTTCTAATCGAAAACTCTTTCCAAGTTCAACCAAACAATACGAAAAGAGAGGCCTTGGAACCCGATGATGAGCCATATGTGGCAACCAAAGGTGAACATGCATAAGAGAGAATGTTGCATGAGAGAGATCGAGGACTAATCAAGAGAGAGACGAATTGCATTTAACGAAAACATGAGGAGAGTGACGCTATGCACGACAACCTAACATTAGAGGAGGGTTGAGCTGGGACAGATCAAGGGTATTGGGTGAAAGAGTCAACTGAGAAAGAAACCTAAGCAAGAGGAGTCTGACAATGAGAGCGAGACTGAGAGAAGTTGAGATGGATGAGTAGAGATGTCTATCTAACTTGGGTTTAAATAGAAAATGGATGAAAGAGTCGAAGAGAGATTTTTCTCCATTAGTAAATGGGAACGAGGGACGGGATTATATTCTCCACCCTAACCTCACTCCAATTCCTGTCCCACCCTACCCCACTTTTATATATAATATTTAAAGATAAAGATTTAGATATAGATATTTTACAAAAAGCAAGTTTTGATTCTAGAAAGAGCAAACTGTATTAGTCTCGAGAGTAATTGTGCCCGAACACATAGTTCACGTACAATTTCAAAATTGCTCAACCCTTTTTCCTGTATTTGTGTCCTATATAACCGATATATGACTCAACTCGTAAAATTTTATGGATATAATACTATTATATCATGGTTAATATTATTATGTCTTGATTAAAGTTATTTACATAAATGCATGGCTATCTAGGAAGTAAAGGAGGAGGTCAACAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGTATAAAGATTTCTTATTCGAATAGTTCAATTAATAGATCTTTTGATCGATGTTATGATATCATAAATACTTAATCTTCATTCAGGTTGATAAGACAAAACATATCCATCATAGTTTAATTAATGGTTCCATGCATATCCTAGGTTTTAAGAAAAAAAACATGTTTGCATGTTTGTGTCATGTCATGTTTTAACTTCTGTCGATATTCATAGTTCTTAAGTTGTGTACATCGATAGCATTGATTATGAAAAAACACTATCGAATGTGTATATATATATGTAGGAATGCTTTAGGAGGAGGAGGAGTGGAAGGAATAAGGACATTGGATGAGCTTGATATGCTTGAGAAGCAACTTGAGATTTGGATATGTCAAGTGCGTTCTACAAAGGTATGCTTTCAAAACAAACCAAACCAAAAAGTCTCTATCTTTTGGTCACTTTGATGTGTTCTTTAGGCATTGAAATTAATTGACCTTTGTGATGCAGATGAAGTTCATGTGTGAAGAGATTGATGCATTGAGGAACCAGGTTCAATTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTAATTTGTGTTATTTAGTTGATTAGGAATCAAATTGGGAAATAAAAAATGGGTTTGAGAAGAAAATGAACATTAATGGCCATCGTCGACCATGAATGTTCACCGACGATGACCGTTAACCACCACCCACTACTGGAGACTAACGACTAAGGGCTCGGGATTGGAAATTTATGATAGGCAACTGATGACTAGTAGTAAGTGATTGAGCACAGTGGCTTGTGATCGGGCCAGGAGTCTATTAACCCGTGACCACTTTGGTGACTAGTGGTCAATGACTAAAATCGAGACTAGGGATAGGCAATCAACTGTTGAGGATTGTTGGGAGAGGAGTTCCACATCGGCCAATTAAGGGATTGATTATGAGTTTATAAGTAAGGAATACATGTCCATTGGTATGAGACCTTTTAGGAAAACTAAAAATAAAGTCATGAGAACTTATGCTTAAAGTGCGCAATATCATACTATTATGGAGGTTCGTGGTTCCTAACATGATATTAGAGTCATGCTCTTAACTTAGCCATGTCAATAGAATCCTCAAATGTCGAACAAAAGAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGATTAAAGTGTCAAACAAATGGTGTATTATGTTCGAGGGCTTCAGAGGAGGAGTCGAGCTTCGATCAAGGAGAGGATGTCTGAGGGATCCATAGGCCTGAGGTAAGGCTCTATGGTGTATTTTGTTCGAGGGGGAGGATTATTGGGAGAGGAGTCCCACATTGGCTAATGAAGGGGTTGATCATGGGTTCTTAAATAAGAATACTCTCCATTAGATAATACCATGAGAACTTATGCTCAAAGTAGATAATATAATACCATTGTAGAGGTTCGTGGTTCCTAACATCAATAACCACCACCCAAGGATCTATTAACTAGTGACCAGTTGTTGGTTTTGGTCATCACCCTCAAACGATCACCACTGTCACTAGAGTGGTCATTGATTACGTGTCATTGTTCTCGATCACAAGTAATTGATTGTTGATCCCAAGTCCTCAGTCCAAATCATTGGAGTGGCAAATAGTCAGTAATCTAGTCGTTATCGATCATTCGTTGTTAATCCTCGGTCCTAGTTATTTGTCACTAGTCTCTTATCCATGGTCCTAATTGTTGGCCATTGGTTGTTGATTCAAGTCGTAGGTAAAAAATTCTCGATATTCGTCAACAATAATTGGTAGTTGGTGGCAAGACAAAGGAATGTGGACCAACGATTAGCAACGACCACCCCCTTTGGGGTCCAGCGTCCTTGTTGGCACACCGCCTCGTGTGGACCCCCTTGGGGGCTCAGCGTCCTTGCTGGTAAATCGTCCGGTGTATGGCTCTAATACCATTTGTAGCGGCCCAAGCCTACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCACTTTTGGACTTCCCCTCAAGGTTTTTAAAATGCGTCTGCTAGAGAGAAGTTTCCACACTCTTATAAAGAATACTTCGTTCTCCTCCCCAACCAACGTGCTCGCTGACAATCATTCCCTTCTCCAATCAATGTGGGACCCCCTAATCCACCCTCCCTCCTTTGATTCTTTGGGACCTAACGTCCTTGTTGGTAGACCGCCTCGTGTCCACCCTCTTCAGAGCTCAGCTCCTTGCTGGCATGTCGTCCAGTGTATGACTCTGATACCATTTGTAACGCCCCATGCCCACCGCTAGGAGATATTATCTTCTTTGGGCTTTCCCTTTTGGACTTCCCTTCTAGATTTTAAAACACCTCTGTTAAGCAGAAGTTTCCACATCTTTATAAATAATACTTTGTTCTCCTCCCAACGATGTGAGATCTCACATCGATGGAGTGATTGCTACCCACAATCCTTGGCCACAGTCGCTAGTCGTATGTCCTCAGTCTTAGTTGCTAGTTATCGATCCTTGATCTCGGTTATTAATCACTGATTCCTAAACCCAATTGCCAATGACCAAGGTTGGAGATCGAGGACCAAGACCAACGATTACTAGCAAGTGACAAAGGATTGAGACCAACGACAAACAATTAGTGACCAGGGTTCGTGATTAGTAACTAACTCTAGCAACTACTCAAATTTGAAATTATTAGTTCATTATGACATTAATAGAGTTACTTCTAGTGTTGGAACAAATTTATCAATAAACTTATGGAACAAATTTTTATTAAGAAAATGTTTACAAAAACATATATTTCCTAAAAAAATTTCTTTATGTTTTAAAGGAACTCATACTGAAAGCTGCCAACAAGTATCTTCACGATAAGGTAATCAACTCGAACATCAATAACTAAATTGTTATTTTCATAAAAGCGGTAACGTATGAACTTTAATGTATTTGCAGATGGAGGAAAACATTTGCAACACAACTAACATTGAAGCTGTGAATATTACCAACTGTCAATATCCACTAACTATACAGGATGAGTTATTTCAGCTTTGCACTTAAGTTAGCCGCTAGAAAAGCATATGTTATATGTTTTAATGTAAAGACATGAGGACATCTATGTAGCTACTTACCTGTGTGAGGTTGAGGTTGCTGTTTTACTACTTTTAGCAGACTTTAACGTTGTTTTTATGCAAATAATGACAATGCATGTACATTGCTAATTGCATTGTCGGCAATGATGATTAGTGTCATCATTATCAAG

mRNA sequence

GAGAGAAAGAAGAAAAAACAATGGAAAAGAAAGTTGGTGACTTTAGAGATTCAAAGATGAGAGTTATAATAAAATAAAAGAAAAAGAAACCATAGTGATGGATAAAGGTAAACTTAGTAAATTAAATTACCGACCAAATTATATTCTTTGAGACATTAAAAACAATGAAAGAAGTTATATAAAGGGTTTTGAATCCCATTAGATTGGTTTAAGGGTTTGTGAGTTTGAGAGGTTAAGAGAAGTAGAGATATTGCATTGACCGGAAGCTAGTTCAAACTAGTGGAAGGTTGGGTGCAGAGCAGCTGCTGCAGAGTTCAAGAAATTGGTTGAAATGGCTCGTGGGAAGGTTCAATTGAAGAGGATTGAGAACCCTGTGCACAGGCAAGTGACGTTCTGTAAGCGCCGAGCTGGGCTGCTTAAGAAGGCTAAGGAGCTGTCTGTGTTGTGCGATGCTGAAATTGGAGTCTTCATTTTCTCCGCCCATGGAAAGCTCTATGAACTCGCCACTAAAGGGTACATGAACCACACCAATGGGAGTCAGCCACCAGAGCCACCCATAGACAACCAAACCCTGGAAGTAAAGGAGGAGGTCAACAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGAATGCTTTAGGAGGAGGAGGAGTGGAAGGAATAAGGACATTGGATGAGCTTGATATGCTTGAGAAGCAACTTGAGATTTGGATATGTCAAGTGCGTTCTACAAAGGAACTCATACTGAAAGCTGCCAACAAGTATCTTCACGATAAGATGGAGGAAAACATTTGCAACACAACTAACATTGAAGCTGTGAATATTACCAACTGTCAATATCCACTAACTATACAGGATGAGTTATTTCAGCTTTGCACTTAAGTTAGCCGCTAGAAAAGCATATGTTATATGTTTTAATGTAAAGACATGAGGACATCTATGTAGCTACTTACCTGTGTGAGGTTGAGGTTGCTGTTTTACTACTTTTAGCAGACTTTAACGTTGTTTTTATGCAAATAATGACAATGCATGTACATTGCTAATTGCATTGTCGGCAATGATGATTAGTGTCATCATTATCAAG

Coding sequence (CDS)

ATGGCTCGTGGGAAGGTTCAATTGAAGAGGATTGAGAACCCTGTGCACAGGCAAGTGACGTTCTGTAAGCGCCGAGCTGGGCTGCTTAAGAAGGCTAAGGAGCTGTCTGTGTTGTGCGATGCTGAAATTGGAGTCTTCATTTTCTCCGCCCATGGAAAGCTCTATGAACTCGCCACTAAAGGGTACATGAACCACACCAATGGGAGTCAGCCACCAGAGCCACCCATAGACAACCAAACCCTGGAAGTAAAGGAGGAGGTCAACAGGCTGAAACAAGAAATTGAAGTCCTAAAGGGTCTCAGGAATGCTTTAGGAGGAGGAGGAGTGGAAGGAATAAGGACATTGGATGAGCTTGATATGCTTGAGAAGCAACTTGAGATTTGGATATGTCAAGTGCGTTCTACAAAGGAACTCATACTGAAAGCTGCCAACAAGTATCTTCACGATAAGATGGAGGAAAACATTTGCAACACAACTAACATTGAAGCTGTGAATATTACCAACTGTCAATATCCACTAACTATACAGGATGAGTTATTTCAGCTTTGCACTTAA

Protein sequence

MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATKGYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIRTLDELDMLEKQLEIWICQVRSTKELILKAANKYLHDKMEENICNTTNIEAVNITNCQYPLTIQDELFQLCT
Homology
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BLAST of Cp4.1LG06g10070 vs. ExPASy Swiss-Prot
Match: Q38841 (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-44
Identity = 112/212 (52.83%), Postives = 133/212 (62.74%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGK+QLKRIENPVHRQVTFCKRR GLLKKAKELSVLCDAEIGV IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  G--------YMNHTNGSQ-------PPEPPIDNQTLEVKEEVNRLKQEIEVL-KGLRNAL 120
           G        YM  T G +         +  +    L+ K+E+N LKQEIE+L KG+    
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMF 120

Query: 121 GGGGVEGIRTLDELDMLEKQLEIWICQVRS--------------TKELILKAANKYLHDK 180
           GGG  +G   L+EL +LEK LE WI Q+RS               KE +LK  NKYL +K
Sbjct: 121 GGG--DGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEK 180

Query: 181 MEENICNTTNIE-AVNITNCQYPLTIQDELFQ 182
           +EEN  +  +   AV  TN  YPLT+  E+FQ
Sbjct: 181 IEENNNSILDANFAVMETNYSYPLTMPSEIFQ 210

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy Swiss-Prot
Match: A2YQK9 (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS26 PE=2 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-36
Identity = 90/173 (52.02%), Postives = 116/173 (67.05%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQL+RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A+IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GYM-----NHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEGIRT 120
           G M      + + S        +Q ++ K+E   LKQEI +L KGLR   G    E + T
Sbjct: 61  GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM-T 120

Query: 121 LDELDMLEKQLEIWICQVRS--------------TKELILKAANKYLHDKMEE 154
           ++EL+ LE+ LEIW+  +RS              +KE +LKAAN+ L +K+ E
Sbjct: 121 VEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy Swiss-Prot
Match: Q0J8G8 (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS26 PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-36
Identity = 90/173 (52.02%), Postives = 116/173 (67.05%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQL+RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A+IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GYM-----NHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEGIRT 120
           G M      + + S        +Q ++ K+E   LKQEI +L KGLR   G    E + T
Sbjct: 61  GTMEELIERYKSASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHM-T 120

Query: 121 LDELDMLEKQLEIWICQVRS--------------TKELILKAANKYLHDKMEE 154
           ++EL+ LE+ LEIW+  +RS              +KE +LKAAN+ L +K+ E
Sbjct: 121 VEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSKEGMLKAANEILQEKIVE 172

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy Swiss-Prot
Match: Q2QW55 (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS33 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-35
Identity = 88/176 (50.00%), Postives = 116/176 (65.91%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RGKVQ++RIENPVHRQVTFCKRR GLLKKA+ELSVLCDA++GV IFS+ GKL+ELAT 
Sbjct: 1   MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
           G        Y ++  G Q     +  Q +  ++ +  L++EI++L +GLR+  GGG   G
Sbjct: 61  GNMHNLVERYQSNVAGGQMEPGALQRQQV-AEQGIFLLREEIDLLQRGLRSTYGGGA--G 120

Query: 121 IRTLDELDMLEKQLEIWICQVRST--------------KELILKAANKYLHDKMEE 154
             TLD+L  LEK LE+WI Q+R+T              KE ILK AN+ L +K++E
Sbjct: 121 EMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNKEGILKEANEMLQEKVKE 173

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy Swiss-Prot
Match: K4DEK0 (MADS-box protein J2 OS=Solanum lycopersicum OX=4081 GN=J2 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 8.9e-24
Identity = 76/179 (42.46%), Postives = 106/179 (59.22%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELAT- 60
           M RG+V+LKRIEN ++RQVTF KRR GLLKKA ELS+LCDAE+ + IFS+ GKLYE ++ 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSILCDAEVALIIFSSRGKLYEFSSA 60

Query: 61  -------KGYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVL-KGLRNALGGGGVEG 120
                  + Y   +  S  P  P+ +  +   E V RLK  +E+L +  R+ LG    E 
Sbjct: 61  SSMMTTLEKYQQCSYASLDPMLPVSDTQMNYNEYV-RLKARVELLQRSQRHILG----ED 120

Query: 121 IRTLD--ELDMLEKQLEIWICQVRS--------------TKELILKAANKYLHDKMEEN 155
           + TL+  EL+ LE QL+  + +VRS               KE +L+ ANK L +K+EE+
Sbjct: 121 LGTLNSKELEQLEHQLDASLKKVRSKKTQSMLDQLADLQEKEQMLEEANKQLKNKLEES 174

[Close]
BLAST of Cp4.1LG06g10070 vs. NCBI nr
Match: XP_022925494.1 (agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous-like MADS-box protein AGL12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355 bits (911), Expect = 5.75e-123
Identity = 184/206 (89.32%), Postives = 184/206 (89.32%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTK              ELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 184
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

[Close]
BLAST of Cp4.1LG06g10070 vs. NCBI nr
Match: KAG6592380.1 (Agamous-like MADS-box protein AGL12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025197.1 Agamous-like MADS-box protein AGL12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354 bits (908), Expect = 1.65e-122
Identity = 183/206 (88.83%), Postives = 184/206 (89.32%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHTNGSQPPEPP+DNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPMDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTK              ELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 184
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

[Close]
BLAST of Cp4.1LG06g10070 vs. NCBI nr
Match: XP_022973991.1 (agamous-like MADS-box protein AGL12 [Cucurbita maxima])

HSP 1 Score: 352 bits (902), Expect = 1.35e-121
Identity = 183/206 (88.83%), Postives = 183/206 (88.83%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHTNGSQPPEP IDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPRIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTK              ELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 184
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

[Close]
BLAST of Cp4.1LG06g10070 vs. NCBI nr
Match: XP_038891170.1 (agamous-like MADS-box protein AGL12 [Benincasa hispida])

HSP 1 Score: 327 bits (839), Expect = 5.41e-112
Identity = 169/205 (82.44%), Postives = 175/205 (85.37%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YM HTNG+QPP+PPID+QTLEVKEE+ RLKQEIEVLKGLRNALGGGG EGI
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKEEIIRLKQEIEVLKGLRNALGGGGAEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
            TLDELDM EKQLEIWICQVRSTK              ELILKAANKYLHDKMEENI NT
Sbjct: 121 MTLDELDMFEKQLEIWICQVRSTKMKFMCEEIEALRNQELILKAANKYLHDKMEENISNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLC 183
           TNIE VNITNCQYPL IQDELFQ+C
Sbjct: 181 TNIEPVNITNCQYPLIIQDELFQVC 205

[Close]
BLAST of Cp4.1LG06g10070 vs. NCBI nr
Match: XP_011656111.1 (agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical protein Csa_008811 [Cucumis sativus])

HSP 1 Score: 317 bits (811), Expect = 1.03e-107
Identity = 166/207 (80.19%), Postives = 174/207 (84.06%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YM HTNG+QPP+PPI +QTLEVKEE+ RLKQEIEVLKGLRNALGGGG EGI
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLRNALGGGGGEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKME-ENICN 180
            TLDELD+ EKQLEIWICQVRSTK              E IL AANKYLHDKME ENI N
Sbjct: 121 MTLDELDIFEKQLEIWICQVRSTKMKFMCEEIEALRNQEFILTAANKYLHDKMEAENISN 180

Query: 181 TTNIEAVNITNCQYPLTIQDELFQLCT 184
           TTN+E VNITNCQYPLTIQDELFQLCT
Sbjct: 181 TTNMEPVNITNCQYPLTIQDELFQLCT 207

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy TrEMBL
Match: A0A6J1ECC1 (agamous-like MADS-box protein AGL12 OS=Cucurbita moschata OX=3662 GN=LOC111432780 PE=4 SV=1)

HSP 1 Score: 355 bits (911), Expect = 2.78e-123
Identity = 184/206 (89.32%), Postives = 184/206 (89.32%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTK              ELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 184
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy TrEMBL
Match: A0A6J1IA69 (agamous-like MADS-box protein AGL12 OS=Cucurbita maxima OX=3661 GN=LOC111472603 PE=4 SV=1)

HSP 1 Score: 352 bits (902), Expect = 6.55e-122
Identity = 183/206 (88.83%), Postives = 183/206 (88.83%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHTNGSQPPEP IDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPRIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
           RTLDELDMLEKQLEIWICQVRSTK              ELILKAANKYLHDKMEENICNT
Sbjct: 121 RTLDELDMLEKQLEIWICQVRSTKMKFMCEEIDALRNQELILKAANKYLHDKMEENICNT 180

Query: 181 TNIEAVNITNCQYPLTIQDELFQLCT 184
           TNIEAVNITNCQYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNITNCQYPLTIQDELFQLCT 206

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy TrEMBL
Match: A0A0A0KW77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1)

HSP 1 Score: 317 bits (811), Expect = 5.01e-108
Identity = 166/207 (80.19%), Postives = 174/207 (84.06%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YM HTNG+QPP+PPI +QTLEVKEE+ RLKQEIEVLKGLRNALGGGG EGI
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLRNALGGGGGEGI 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKME-ENICN 180
            TLDELD+ EKQLEIWICQVRSTK              E IL AANKYLHDKME ENI N
Sbjct: 121 MTLDELDIFEKQLEIWICQVRSTKMKFMCEEIEALRNQEFILTAANKYLHDKMEAENISN 180

Query: 181 TTNIEAVNITNCQYPLTIQDELFQLCT 184
           TTN+E VNITNCQYPLTIQDELFQLCT
Sbjct: 181 TTNMEPVNITNCQYPLTIQDELFQLCT 207

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy TrEMBL
Match: A0A6J1D9I4 (agamous-like MADS-box protein AGL12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018277 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 5.53e-100
Identity = 161/207 (77.78%), Postives = 171/207 (82.61%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHT+ +QPP+P I+NQTLE+KEEVNRLKQEIEV KGLRNA GGG  EG+
Sbjct: 61  GTMQGLIERYMNHTSRTQPPDPSIENQTLEIKEEVNRLKQEIEVQKGLRNAFGGGA-EGM 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTK--------------ELILKAANKYLHDKMEENICNT 180
            TLDELDM EKQLEIWICQVRSTK              +L+LKA NKYLHDKMEENI  T
Sbjct: 121 -TLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQDLMLKAVNKYLHDKMEENIGYT 180

Query: 181 TNIEAVNI-TNCQYPLTIQDELFQLCT 184
           TNIEAVN  TN QYPLTIQDELFQLCT
Sbjct: 181 TNIEAVNNNTNFQYPLTIQDELFQLCT 205

[Close]
BLAST of Cp4.1LG06g10070 vs. ExPASy TrEMBL
Match: A0A6J1D898 (agamous-like MADS-box protein AGL12 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018277 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 8.52e-94
Identity = 151/193 (78.24%), Postives = 163/193 (84.46%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  G--------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGI 120
           G        YMNHT+ +QPP+P I+NQTLE+KEEVNRLKQEIEV KGLRNA GGG  EG+
Sbjct: 61  GTMQGLIERYMNHTSRTQPPDPSIENQTLEIKEEVNRLKQEIEVQKGLRNAFGGGA-EGM 120

Query: 121 RTLDELDMLEKQLEIWICQVRSTKELILKAANKYLHDKMEENICNTTNIEAVNI-TNCQY 180
            TLDELDM EKQLEIWICQVRSTK   +    + L ++MEENI  TTNIEAVN  TN QY
Sbjct: 121 -TLDELDMFEKQLEIWICQVRSTKMKFMCQEIEALKNQMEENIGYTTNIEAVNNNTNFQY 180

Query: 181 PLTIQDELFQLCT 184
           PLTIQDELFQLCT
Sbjct: 181 PLTIQDELFQLCT 191

[Close]
BLAST of Cp4.1LG06g10070 vs. TAIR 10
Match: AT1G71692.1 (AGAMOUS-like 12 )

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-45
Identity = 112/212 (52.83%), Postives = 133/212 (62.74%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           MARGK+QLKRIENPVHRQVTFCKRR GLLKKAKELSVLCDAEIGV IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  G--------YMNHTNGSQ-------PPEPPIDNQTLEVKEEVNRLKQEIEVL-KGLRNAL 120
           G        YM  T G +         +  +    L+ K+E+N LKQEIE+L KG+    
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQKGISYMF 120

Query: 121 GGGGVEGIRTLDELDMLEKQLEIWICQVRS--------------TKELILKAANKYLHDK 180
           GGG  +G   L+EL +LEK LE WI Q+RS               KE +LK  NKYL +K
Sbjct: 121 GGG--DGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEK 180

Query: 181 MEENICNTTNIE-AVNITNCQYPLTIQDELFQ 182
           +EEN  +  +   AV  TN  YPLT+  E+FQ
Sbjct: 181 IEENNNSILDANFAVMETNYSYPLTMPSEIFQ 210

[Close]
BLAST of Cp4.1LG06g10070 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RGK Q+KRIEN   RQVTF KRR GLLKKA ELSVLCDAE+ + IFS  GKLYE A+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 61  G-------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIR 120
                   Y+ HT      +P  +     +K E   + ++IE L+  +  L G G+ G  
Sbjct: 61  NMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGI-GTC 120

Query: 121 TLDELDMLEKQLEIWICQVRSTKELILKAANKYLHDK 151
           +++EL  +E+QLE  +  +R+ K  + K   + L  K
Sbjct: 121 SIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQK 156

[Close]
BLAST of Cp4.1LG06g10070 vs. TAIR 10
Match: AT3G58780.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-24
Identity = 63/153 (41.18%), Postives = 91/153 (59.48%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           + RGK+++KRIEN  +RQVTFCKRR GLLKKA ELSVLCDAE+ + IFS  G+LYE A  
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  GYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIRTLDELDM 120
            Y    + +  P    +  T   ++E ++L+++I  ++     + G  + G     EL  
Sbjct: 76  RYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESL-GSLNFKELKN 135

Query: 121 LEKQLEIWICQVRSTKELILKAANKYLHDKMEE 154
           LE +LE  I +VRS K  +L A  +Y+  +  E
Sbjct: 136 LEGRLEKGISRVRSKKNELLVAEIEYMQKREME 167

[Close]
BLAST of Cp4.1LG06g10070 vs. TAIR 10
Match: AT4G09960.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 110.2 bits (274), Expect = 1.8e-24
Identity = 64/160 (40.00%), Postives = 92/160 (57.50%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           M RGK+++KRIEN  +RQVTFCKRR GLLKKA ELSVLCDAE+ + +FS  G+LYE A  
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  G-------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIR 120
                   Y    + S       +      ++E  +L+Q+I+ ++     L G  +  + 
Sbjct: 61  NIRSTIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSL- 120

Query: 121 TLDELDMLEKQLEIWICQVRSTKELILKAANKYLHDKMEE 154
           ++ EL  +E +LE  I ++RS KE+ L   N YL  K+ E
Sbjct: 121 SVKELKQVENRLEKAISRIRSKKEIELDNENIYLRTKVAE 159

[Close]
BLAST of Cp4.1LG06g10070 vs. TAIR 10
Match: AT2G42830.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 108.6 bits (270), Expect = 5.4e-24
Identity = 64/160 (40.00%), Postives = 94/160 (58.75%), Query Frame = 0 

Query: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60
           + RGK+++KRIEN  +RQVTFCKRR GLLKKA ELSVLCDAE+ + IFS  G+LYE A  
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  G-------YMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLRNALGGGGVEGIR 120
                   Y    + +  P    +  T   ++E ++L+++I  ++ L   + G  + G  
Sbjct: 76  SVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESL-GSL 135

Query: 121 TLDELDMLEKQLEIWICQVRSTKELILKAANKYLHDKMEE 154
              EL  LE +LE  I +VRS K  +L A  +Y+  +++E
Sbjct: 136 NFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKRVKE 174

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g10070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q388412.0e-4452.83Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=... [more]
A2YQK96.0e-3652.02MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS2... [more]
Q0J8G86.0e-3652.02MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
Q2QW552.3e-3550.00MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
K4DEK08.9e-2442.46MADS-box protein J2 OS=Solanum lycopersicum OX=4081 GN=J2 PE=1 SV=1[more]
BLAST of Cp4.1LG06g10070 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022925494.15.75e-12389.32agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous... [more]
KAG6592380.11.65e-12288.83Agamous-like MADS-box protein AGL12, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022973991.11.35e-12188.83agamous-like MADS-box protein AGL12 [Cucurbita maxima][more]
XP_038891170.15.41e-11282.44agamous-like MADS-box protein AGL12 [Benincasa hispida][more]
XP_011656111.11.03e-10780.19agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical p... [more]
BLAST of Cp4.1LG06g10070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ECC12.78e-12389.32agamous-like MADS-box protein AGL12 OS=Cucurbita moschata OX=3662 GN=LOC11143278... [more]
A0A6J1IA696.55e-12288.83agamous-like MADS-box protein AGL12 OS=Cucurbita maxima OX=3661 GN=LOC111472603 ... [more]
A0A0A0KW775.01e-10880.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1[more]
A0A6J1D9I45.53e-10077.78agamous-like MADS-box protein AGL12 isoform X1 OS=Momordica charantia OX=3673 GN... [more]
A0A6J1D8988.52e-9478.24agamous-like MADS-box protein AGL12 isoform X2 OS=Momordica charantia OX=3673 GN... [more]
BLAST of Cp4.1LG06g10070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71692.11.5e-4552.83AGAMOUS-like 12 [more]
AT2G45660.16.3e-2542.04AGAMOUS-like 20 [more]
AT3G58780.21.1e-2441.18K-box region and MADS-box transcription factor family protein [more]
AT4G09960.21.8e-2440.00K-box region and MADS-box transcription factor family protein [more]
AT2G42830.25.4e-2440.00K-box region and MADS-box transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100
NoneNo IPR availablePANTHERPTHR48019:SF45AGAMOUS-LIKE MADS-BOX PROTEIN AGL12coord: 1..181
NoneNo IPR availablePANTHERPTHR48019SERUM RESPONSE FACTOR HOMOLOGcoord: 1..181
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 38..59
score: 50.51
coord: 3..23
score: 64.07
coord: 23..38
score: 80.42
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 2.8E-35
score: 133.2
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..56
e-value: 1.5E-22
score: 78.9
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 29.604259
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 15..92
e-value: 4.5E-21
score: 76.4
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 1..64
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 79..152
e-value: 4.1E-10
score: 39.7
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 2..70
e-value: 1.17225E-36
score: 120.35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g10070.1Cp4.1LG06g10070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding