Cp4.1LG06g09990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGCTAACGTTAAATCAGGCTTATTAAACGTGATGGCATTTGAGAAGCTTTCTAGGATTGATAACATAGTAGGCTCTTACGTCATCCTGATGGGTAATCTGATGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCTAGAGGCACGGTTTTAGAAAGGTTGGGCAACTACTCCTACATCTACGAATTGGCGAATGAGCATTGTAAGAGGCCATGGAGAATATGGTGGACAACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTCTTGTTGGGTCGTTCACCTTTATGGACGTTGCCGCTTGAGGATGTACTGCGAGATGTGTTGCTGCCTGAGAATCAGCTGCCCATGAAGCTTCTTGCCAAGCTATGTTCCATGTTAATGCTAGAGGGAGAGGGAGAGCATAACAAAGTATGTCTTATCTCTACTTAGCTAAAGCACATTCTTTTTTTAGCTTTCCTTTTTCAAAATCGTGAGGAGAAGCCCGAGAGAGAGAGAAAGTCCAAAGGTGACAATATTTGCTCGCGGTGTACTTCGGTCGTGACACTAATAAGGGTGTAAAAATCTCTCCCTAATAACTGTGTTTTAAAAATCTTGAGGGAAAGCTCGAAAGGAAGAGCGCAAAGAGGATAATATCTGCTAGTGGTAGGCTTACGCAGTTACATTTGTAACTATCTTCTTTGCTATCTTATTGCTTCTAACTAATATAATTATGTTTGATCATTTGAAACATGCCTTGTGATGCATGCACAGAATGTCAAATCGCTTGTTAGGGAGTCGCAGAAGATACCCGCCTATTTAAAGAAAATGTTAATGGAGAACGACTACTCACACATTCTAGATATGTATAGGGCCGAATTGCAGTATTACGAGGGGGAATGAACAGGAACGACATCAAATCAGCCACCCAAAAATGAGATTCACACACTTTGAAATGATATTCGGACAGTTGGGAATGAGACTCAGCCACTTGGGAATGGGTCATGAGATTCAGCTAGCCAGACGCTTCCATAAAGCTGGGATCAAACTCAAGAAAGGGTGCAACCTTAGAGACGTGGATTTTGATCAAAACAAAGGTGTGTTGAGCCTCCCGTTCATCGAAATGAATGCTAACATTGAATCAGGCTTATTGAACGCGATGGCATTTGAGAAGCTTTTAGGGATTGGTAACATAGTAGGCTCTTTCGTCATCTTGATGGGTAATCTGCTGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCCAAAGGCACGGTTTTAGGCTTGTGGGGCCACTACCCTACGGTCTACAAATCGGTGAATAACCATTGTAAGAGGCCATGGAAAATATGGTGGACGACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTTTATGCTTTGATCGGTTTTGCACTCCTTATTATCCAAACCGTATACGGAGTGTATGGCTACTATCTCCCACGTCCATCTTGA ATGAATGCTAACGTTAAATCAGGCTTATTAAACGTGATGGCATTTGAGAAGCTTTCTAGGATTGATAACATAGTAGGCTCTTACGTCATCCTGATGGGTAATCTGATGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCTAGAGGCACGGTTTTAGAAAGGTTGGGCAACTACTCCTACATCTACGAATTGGCGAATGAGCATTGTAAGAGGCCATGGAGAATATGGTGGACAACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTCTTGTTGGGTCGTTCACCTTTATGGACGTTGCCGCTTGAGGATGTACTGCGAGATGTGTTGCTGCCTGAGAATCAGCTGCCCATGAAGCTTCTTGCCAAGCTATGGCCGAATTGCAGTATTACGAGGGGGAATGAACAGGAACGACATCAAATCAGCCACCCAAAAATGAGATTCACACACTTTGAAATGATATTCGGACAGTTGGGAATGAGACTCAGCCACTTGGGAATGGGTCATGAGATTCAGCTAGCCAGACGCTTCCATAAAGCTGGGATCAAACTCAAGAAAGGGTGCAACCTTAGAGACGTGGATTTTGATCAAAACAAAGGTGTGTTGAGCCTCCCGTTCATCGAAATGAATGCTAACATTGAATCAGGCTTATTGAACGCGATGGCATTTGAGAAGCTTTTAGGGATTGGTAACATAGTAGGCTCTTTCGTCATCTTGATGGGTAATCTGCTGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCCAAAGGCACGGTTTTAGGCTTGTGGGGCCACTACCCTACGGTCTACAAATCGGTGAATAACCATTGTAAGAGGCCATGGAAAATATGGTGGACGACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTTTATGCTTTGATCGGTTTTGCACTCCTTATTATCCAAACCGTATACGGAGTGTATGGCTACTATCTCCCACGTCCATCTTGA ATGAATGCTAACGTTAAATCAGGCTTATTAAACGTGATGGCATTTGAGAAGCTTTCTAGGATTGATAACATAGTAGGCTCTTACGTCATCCTGATGGGTAATCTGATGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCTAGAGGCACGGTTTTAGAAAGGTTGGGCAACTACTCCTACATCTACGAATTGGCGAATGAGCATTGTAAGAGGCCATGGAGAATATGGTGGACAACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTCTTGTTGGGTCGTTCACCTTTATGGACGTTGCCGCTTGAGGATGTACTGCGAGATGTGTTGCTGCCTGAGAATCAGCTGCCCATGAAGCTTCTTGCCAAGCTATGGCCGAATTGCAGTATTACGAGGGGGAATGAACAGGAACGACATCAAATCAGCCACCCAAAAATGAGATTCACACACTTTGAAATGATATTCGGACAGTTGGGAATGAGACTCAGCCACTTGGGAATGGGTCATGAGATTCAGCTAGCCAGACGCTTCCATAAAGCTGGGATCAAACTCAAGAAAGGGTGCAACCTTAGAGACGTGGATTTTGATCAAAACAAAGGTGTGTTGAGCCTCCCGTTCATCGAAATGAATGCTAACATTGAATCAGGCTTATTGAACGCGATGGCATTTGAGAAGCTTTTAGGGATTGGTAACATAGTAGGCTCTTTCGTCATCTTGATGGGTAATCTGCTGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCCAAAGGCACGGTTTTAGGCTTGTGGGGCCACTACCCTACGGTCTACAAATCGGTGAATAACCATTGTAAGAGGCCATGGAAAATATGGTGGACGACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTTTATGCTTTGATCGGTTTTGCACTCCTTATTATCCAAACCGTATACGGAGTGTATGGCTACTATCTCCCACGTCCATCTTGA MNANVKSGLLNVMAFEKLSRIDNIVGSYVILMGNLMEKDEVDSFNQLARGTVLERLGNYSYIYELANEHCKRPWRIWWTTLKDVNFQSPWTIISTFLLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQISHPKMRFTHFEMIFGQLGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS Homology
BLAST of Cp4.1LG06g09990 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06 Identity = 44/179 (24.58%), Postives = 78/179 (43.58%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 7.6e-05 Identity = 41/173 (23.70%), Postives = 73/173 (42.20%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_022925444.1 (UPF0481 protein At3g47200-like [Cucurbita moschata]) HSP 1 Score: 446 bits (1148), Expect = 4.47e-153 Identity = 232/293 (79.18%), Postives = 234/293 (79.86%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: KAG7025179.1 (UPF0481 protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325 bits (833), Expect = 9.73e-106 Identity = 176/264 (66.67%), Postives = 198/264 (75.00%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_023535502.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 320 bits (820), Expect = 9.54e-104 Identity = 171/261 (65.52%), Postives = 192/261 (73.56%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_023535324.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 315 bits (807), Expect = 8.76e-102 Identity = 168/249 (67.47%), Postives = 190/249 (76.31%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_022925442.1 (UPF0481 protein At3g47200-like [Cucurbita moschata]) HSP 1 Score: 311 bits (796), Expect = 4.01e-100 Identity = 165/249 (66.27%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EC69 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432744 PE=4 SV=1) HSP 1 Score: 446 bits (1148), Expect = 2.17e-153 Identity = 232/293 (79.18%), Postives = 234/293 (79.86%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EBQ1 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432742 PE=4 SV=1) HSP 1 Score: 311 bits (796), Expect = 1.94e-100 Identity = 165/249 (66.27%), Postives = 189/249 (75.90%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EF72 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432743 PE=4 SV=1) HSP 1 Score: 302 bits (773), Expect = 2.06e-96 Identity = 171/289 (59.17%), Postives = 189/289 (65.40%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EC85 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432746 PE=4 SV=1) HSP 1 Score: 295 bits (754), Expect = 5.99e-96 Identity = 164/271 (60.52%), Postives = 185/271 (68.27%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EI35 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432766 PE=4 SV=1) HSP 1 Score: 282 bits (722), Expect = 2.05e-89 Identity = 153/250 (61.20%), Postives = 179/250 (71.60%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 69.3 bits (168), Expect = 6.6e-12 Identity = 51/180 (28.33%), Postives = 75/180 (41.67%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT5G22550.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 63.5 bits (153), Expect = 3.6e-10 Identity = 44/178 (24.72%), Postives = 78/178 (43.82%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT5G22550.2 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 63.5 bits (153), Expect = 3.6e-10 Identity = 44/178 (24.72%), Postives = 78/178 (43.82%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT3G47250.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-09 Identity = 49/207 (23.67%), Postives = 84/207 (40.58%), Query Frame = 0
BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT3G47250.2 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-09 Identity = 49/207 (23.67%), Postives = 84/207 (40.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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