Cp4.1LG06g09990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG06g09990
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUPF0481 protein At3g47200-like
LocationCp4.1LG06: 10097254 .. 10098745 (+)
RNA-Seq ExpressionCp4.1LG06g09990
SyntenyCp4.1LG06g09990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCTAACGTTAAATCAGGCTTATTAAACGTGATGGCATTTGAGAAGCTTTCTAGGATTGATAACATAGTAGGCTCTTACGTCATCCTGATGGGTAATCTGATGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCTAGAGGCACGGTTTTAGAAAGGTTGGGCAACTACTCCTACATCTACGAATTGGCGAATGAGCATTGTAAGAGGCCATGGAGAATATGGTGGACAACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTCTTGTTGGGTCGTTCACCTTTATGGACGTTGCCGCTTGAGGATGTACTGCGAGATGTGTTGCTGCCTGAGAATCAGCTGCCCATGAAGCTTCTTGCCAAGCTATGTTCCATGTTAATGCTAGAGGGAGAGGGAGAGCATAACAAAGTATGTCTTATCTCTACTTAGCTAAAGCACATTCTTTTTTTAGCTTTCCTTTTTCAAAATCGTGAGGAGAAGCCCGAGAGAGAGAGAAAGTCCAAAGGTGACAATATTTGCTCGCGGTGTACTTCGGTCGTGACACTAATAAGGGTGTAAAAATCTCTCCCTAATAACTGTGTTTTAAAAATCTTGAGGGAAAGCTCGAAAGGAAGAGCGCAAAGAGGATAATATCTGCTAGTGGTAGGCTTACGCAGTTACATTTGTAACTATCTTCTTTGCTATCTTATTGCTTCTAACTAATATAATTATGTTTGATCATTTGAAACATGCCTTGTGATGCATGCACAGAATGTCAAATCGCTTGTTAGGGAGTCGCAGAAGATACCCGCCTATTTAAAGAAAATGTTAATGGAGAACGACTACTCACACATTCTAGATATGTATAGGGCCGAATTGCAGTATTACGAGGGGGAATGAACAGGAACGACATCAAATCAGCCACCCAAAAATGAGATTCACACACTTTGAAATGATATTCGGACAGTTGGGAATGAGACTCAGCCACTTGGGAATGGGTCATGAGATTCAGCTAGCCAGACGCTTCCATAAAGCTGGGATCAAACTCAAGAAAGGGTGCAACCTTAGAGACGTGGATTTTGATCAAAACAAAGGTGTGTTGAGCCTCCCGTTCATCGAAATGAATGCTAACATTGAATCAGGCTTATTGAACGCGATGGCATTTGAGAAGCTTTTAGGGATTGGTAACATAGTAGGCTCTTTCGTCATCTTGATGGGTAATCTGCTGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCCAAAGGCACGGTTTTAGGCTTGTGGGGCCACTACCCTACGGTCTACAAATCGGTGAATAACCATTGTAAGAGGCCATGGAAAATATGGTGGACGACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTTTATGCTTTGATCGGTTTTGCACTCCTTATTATCCAAACCGTATACGGAGTGTATGGCTACTATCTCCCACGTCCATCTTGA

mRNA sequence

ATGAATGCTAACGTTAAATCAGGCTTATTAAACGTGATGGCATTTGAGAAGCTTTCTAGGATTGATAACATAGTAGGCTCTTACGTCATCCTGATGGGTAATCTGATGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCTAGAGGCACGGTTTTAGAAAGGTTGGGCAACTACTCCTACATCTACGAATTGGCGAATGAGCATTGTAAGAGGCCATGGAGAATATGGTGGACAACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTCTTGTTGGGTCGTTCACCTTTATGGACGTTGCCGCTTGAGGATGTACTGCGAGATGTGTTGCTGCCTGAGAATCAGCTGCCCATGAAGCTTCTTGCCAAGCTATGGCCGAATTGCAGTATTACGAGGGGGAATGAACAGGAACGACATCAAATCAGCCACCCAAAAATGAGATTCACACACTTTGAAATGATATTCGGACAGTTGGGAATGAGACTCAGCCACTTGGGAATGGGTCATGAGATTCAGCTAGCCAGACGCTTCCATAAAGCTGGGATCAAACTCAAGAAAGGGTGCAACCTTAGAGACGTGGATTTTGATCAAAACAAAGGTGTGTTGAGCCTCCCGTTCATCGAAATGAATGCTAACATTGAATCAGGCTTATTGAACGCGATGGCATTTGAGAAGCTTTTAGGGATTGGTAACATAGTAGGCTCTTTCGTCATCTTGATGGGTAATCTGCTGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCCAAAGGCACGGTTTTAGGCTTGTGGGGCCACTACCCTACGGTCTACAAATCGGTGAATAACCATTGTAAGAGGCCATGGAAAATATGGTGGACGACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTTTATGCTTTGATCGGTTTTGCACTCCTTATTATCCAAACCGTATACGGAGTGTATGGCTACTATCTCCCACGTCCATCTTGA

Coding sequence (CDS)

ATGAATGCTAACGTTAAATCAGGCTTATTAAACGTGATGGCATTTGAGAAGCTTTCTAGGATTGATAACATAGTAGGCTCTTACGTCATCCTGATGGGTAATCTGATGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCTAGAGGCACGGTTTTAGAAAGGTTGGGCAACTACTCCTACATCTACGAATTGGCGAATGAGCATTGTAAGAGGCCATGGAGAATATGGTGGACAACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTCTTGTTGGGTCGTTCACCTTTATGGACGTTGCCGCTTGAGGATGTACTGCGAGATGTGTTGCTGCCTGAGAATCAGCTGCCCATGAAGCTTCTTGCCAAGCTATGGCCGAATTGCAGTATTACGAGGGGGAATGAACAGGAACGACATCAAATCAGCCACCCAAAAATGAGATTCACACACTTTGAAATGATATTCGGACAGTTGGGAATGAGACTCAGCCACTTGGGAATGGGTCATGAGATTCAGCTAGCCAGACGCTTCCATAAAGCTGGGATCAAACTCAAGAAAGGGTGCAACCTTAGAGACGTGGATTTTGATCAAAACAAAGGTGTGTTGAGCCTCCCGTTCATCGAAATGAATGCTAACATTGAATCAGGCTTATTGAACGCGATGGCATTTGAGAAGCTTTTAGGGATTGGTAACATAGTAGGCTCTTTCGTCATCTTGATGGGTAATCTGCTGGAGAAAGATGAGGTAGATTCATTCAATCAGCTGGCCAAAGGCACGGTTTTAGGCTTGTGGGGCCACTACCCTACGGTCTACAAATCGGTGAATAACCATTGTAAGAGGCCATGGAAAATATGGTGGACGACTCTCAAAGATGTCAACTTTCAAAGTCCGTGGACCATTATCTCTACTTTTTATGCTTTGATCGGTTTTGCACTCCTTATTATCCAAACCGTATACGGAGTGTATGGCTACTATCTCCCACGTCCATCTTGA

Protein sequence

MNANVKSGLLNVMAFEKLSRIDNIVGSYVILMGNLMEKDEVDSFNQLARGTVLERLGNYSYIYELANEHCKRPWRIWWTTLKDVNFQSPWTIISTFLLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQISHPKMRFTHFEMIFGQLGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS
Homology
BLAST of Cp4.1LG06g09990 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 44/179 (24.58%), Postives = 78/179 (43.58%), Query Frame = 0

Query: 180 ARRFHKAGIKLK----KGCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKL-LG 239
           A+R    GIK +    K  ++ +V   +NK  L +P +  +  I S  LN +AFE+    
Sbjct: 282 AKRLRLQGIKFRLRRSKEDSILNVRLKKNK--LQIPQLRFDGFISSFFLNCVAFEQFYTD 341

Query: 240 IGNIVGSFVILMGNLLEKDE----------------------VDSFNQLAKGTVLGLWGH 299
             N + ++++ MG LL  +E                       + F  ++K  V  +   
Sbjct: 342 SSNEITTYIVFMGCLLNNEEDVTFLRNDKLIIENHFGSNNEVSEFFKTISKDVVFEVDTS 401

Query: 300 Y-PTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGY 331
           Y   V+K VN + K+ +   W   +  +F+SPWT +S+   L    L ++Q+   +  Y
Sbjct: 402 YLNNVFKGVNEYTKKWYNGLWAGFRHTHFESPWTFLSSCAVLFVILLTMLQSTVAILSY 458

BLAST of Cp4.1LG06g09990 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 7.6e-05
Identity = 41/173 (23.70%), Postives = 73/173 (42.20%), Query Frame = 0

Query: 184 HKAGIKLKKGC--NLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGS 243
           HKAG++ K     N+  V FD N G   LP I ++ N E+ L N +A+E     G +V +
Sbjct: 352 HKAGVRFKPTAHGNISTVTFDSNSGQFYLPVINLDINTETVLRNLVAYEATNTSGPLVFT 411

Query: 244 -FVILMGNLLEKDE---------------------VDSFNQLAKGTVLGLWGHYPTVYKS 303
            +  L+  +++ +E                      + +N ++K   L   G      + 
Sbjct: 412 RYTELINGIIDSEEDVRLLREQGVLVSRLKSDQEAAEMWNGMSKSVRLTKVGFLDKTIED 471

Query: 304 VNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYL 333
           VN +    WK+    L +V     W I++   A++   L+ +Q    V+  +L
Sbjct: 472 VNRYYTGRWKVKIGRLVEVYVYGSWQILAFLAAVLLLMLVSLQLFSLVFSSFL 524

BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_022925444.1 (UPF0481 protein At3g47200-like [Cucurbita moschata])

HSP 1 Score: 446 bits (1148), Expect = 4.47e-153
Identity = 232/293 (79.18%), Postives = 234/293 (79.86%), Query Frame = 0

Query: 93  ISTFLLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKLWPNCSIT--------------- 152
           I   LLGRSPLWTLPLEDVLRDVLL ENQLPMKLLAKL   CS+                
Sbjct: 137 IIQVLLGRSPLWTLPLEDVLRDVLLLENQLPMKLLAKL---CSMLMLEGEGEHNKNVESL 196

Query: 153 ----------------------------------RGNEQERHQISHPKMRFTHFEMIFGQ 212
                                              GNEQERHQISH +MRFTHFEMIFGQ
Sbjct: 197 VRESQKIPAYLKKMLMENDYSHILDMYRAELQYYEGNEQERHQISHTEMRFTHFEMIFGQ 256

Query: 213 LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGL 272
           LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGL
Sbjct: 257 LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGL 316

Query: 273 LNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNH 332
           LNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNH
Sbjct: 317 LNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNH 376

Query: 333 CKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS 336
           CKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS
Sbjct: 377 CKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS 426

BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: KAG7025179.1 (UPF0481 protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 325 bits (833), Expect = 9.73e-106
Identity = 176/264 (66.67%), Postives = 198/264 (75.00%), Query Frame = 0

Query: 97  LLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQER------------ 156
           LL   PL+ LPLEDV RD+LL ENQLPMKLL KL+   S+ + +E+E             
Sbjct: 140 LLYNLPLFKLPLEDVQRDMLLLENQLPMKLLDKLY---SMLKSDEKENIKSLVWRSPNLP 199

Query: 157 HQISHPKMRFTHFEMI--------FGQLG----MRLSHLGMGHEIQLARRFHKAGIKLKK 216
            ++    M   +  ++        FG       ++ SHLGMGHEIQLARRF KAGIKLKK
Sbjct: 200 TEVKEILMAMDYLHLLDMYRKELKFGTGNEPYLLQRSHLGMGHEIQLARRFDKAGIKLKK 259

Query: 217 GCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEK 276
           GCNL+DVDFDQNKGVLSLPFI+MNANIESGLLNAM FEKL+GI NIVGSFVILMGNLLEK
Sbjct: 260 GCNLKDVDFDQNKGVLSLPFIQMNANIESGLLNAMTFEKLVGIDNIVGSFVILMGNLLEK 319

Query: 277 DEVDSFNQLAKGTVLGLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYA 336
           DEVDSFNQLAKGTVL +W  Y  VY SVN HCKRPW+IWWTTLKD +F  PWTIIS+ YA
Sbjct: 320 DEVDSFNQLAKGTVLSMWDVYAHVYSSVNEHCKRPWRIWWTTLKD-SFIGPWTIISSLYA 379

BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_023535502.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (820), Expect = 9.54e-104
Identity = 171/261 (65.52%), Postives = 192/261 (73.56%), Query Frame = 0

Query: 97  LLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKL----------------WPNCSITRGN 156
           LLG SPL+ LPL+D  RD+LL ENQLPMKLL KL                W + ++    
Sbjct: 141 LLGNSPLFILPLKDGRRDMLLLENQLPMKLLDKLCFMLKLDNIENIKSLVWRSSNLPTEV 200

Query: 157 EQE---RHQISHPKMRFTHFEMIFGQ--LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCN 216
           +++      +    M  T  E   G     ++ SHLGM HEIQLARRF KAGIKLKKGCN
Sbjct: 201 KEKLMANDYLHLLDMYRTELEFHTGNELYLLQCSHLGMSHEIQLARRFDKAGIKLKKGCN 260

Query: 217 LRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEV 276
           +RDVDFD+NKGVLSLPFIEMNANIESGLLN M FEKL+GI NIVGSFVILMGNLLEKDEV
Sbjct: 261 IRDVDFDENKGVLSLPFIEMNANIESGLLNVMTFEKLVGIDNIVGSFVILMGNLLEKDEV 320

Query: 277 DSFNQLAKGTVLGLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIG 336
           DSFNQLAKGTVL +W  Y  VY SVN HCKRPW+IWWTTLK+V+FQSPW IIS   A+IG
Sbjct: 321 DSFNQLAKGTVLSMWDKYAYVYYSVNKHCKRPWRIWWTTLKNVSFQSPWIIISALSAIIG 380

BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_023535324.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315 bits (807), Expect = 8.76e-102
Identity = 168/249 (67.47%), Postives = 190/249 (76.31%), Query Frame = 0

Query: 110 DVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQI------------SHPKMRFTHF 169
           DVLRD+LL ENQLPMKLL KL+   S+   N++ +  +            +  +  ++H 
Sbjct: 154 DVLRDMLLLENQLPMKLLDKLYL-MSMPEHNKKVKSLVWEFRNLPTDVKKTLLERDYSHL 213

Query: 170 ------EMIFGQLG----MRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGV 229
                 E++F +      ++ SHLGMGHEIQLA RFHKAGIK KKGCNL DV FD+ +GV
Sbjct: 214 LDMYRAELVFYKGNEWKPLQRSHLGMGHEIQLATRFHKAGIKFKKGCNLMDVYFDRKRGV 273

Query: 230 LSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVL 289
           LSLPFIEMNA+IESGLLNAMAFEKL GI NIV SFVILMGNL+EKDEVDSFNQLAKG VL
Sbjct: 274 LSLPFIEMNAHIESGLLNAMAFEKLYGIDNIVDSFVILMGNLMEKDEVDSFNQLAKGEVL 333

Query: 290 GLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGV 336
           G+WGHY  VY SVN HCKRPW+IWWTTLKDVNFQSPWTIIST  ALIGFA LIIQTVYGV
Sbjct: 334 GMWGHYTYVYNSVNEHCKRPWRIWWTTLKDVNFQSPWTIISTLSALIGFAFLIIQTVYGV 393

BLAST of Cp4.1LG06g09990 vs. NCBI nr
Match: XP_022925442.1 (UPF0481 protein At3g47200-like [Cucurbita moschata])

HSP 1 Score: 311 bits (796), Expect = 4.01e-100
Identity = 165/249 (66.27%), Postives = 189/249 (75.90%), Query Frame = 0

Query: 110 DVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQI------------SHPKMRFTHF 169
           DVLRD+LL ENQLPMKLL KL+   S+   N++ +  +            +  +  + H 
Sbjct: 154 DVLRDMLLLENQLPMKLLDKLYL-MSMPEHNKKVKSLVWEFRNLPTEVKKTLLERDYLHL 213

Query: 170 ------EMIFGQLG----MRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGV 229
                 E++F +      ++ SHLGMGHEIQLA RFHKAGIK KKGCNL DV FD+ +GV
Sbjct: 214 LDMYRAELVFYKGNEWKPLQRSHLGMGHEIQLATRFHKAGIKFKKGCNLMDVYFDRKRGV 273

Query: 230 LSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVL 289
           LSLPFIEMNA+I+SGL+NAMAFEKL GI NIV SFVILMGNL+EKDEVDSFNQLAKG VL
Sbjct: 274 LSLPFIEMNAHIDSGLVNAMAFEKLYGIDNIVDSFVILMGNLMEKDEVDSFNQLAKGEVL 333

Query: 290 GLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGV 336
           G+WGHY  VY SVN HCKRPW+IWWTTLKDVNFQSPWTIIST  ALIGFA LIIQTVYGV
Sbjct: 334 GMWGHYNYVYNSVNEHCKRPWRIWWTTLKDVNFQSPWTIISTLSALIGFAFLIIQTVYGV 393

BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EC69 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432744 PE=4 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 2.17e-153
Identity = 232/293 (79.18%), Postives = 234/293 (79.86%), Query Frame = 0

Query: 93  ISTFLLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKLWPNCSIT--------------- 152
           I   LLGRSPLWTLPLEDVLRDVLL ENQLPMKLLAKL   CS+                
Sbjct: 137 IIQVLLGRSPLWTLPLEDVLRDVLLLENQLPMKLLAKL---CSMLMLEGEGEHNKNVESL 196

Query: 153 ----------------------------------RGNEQERHQISHPKMRFTHFEMIFGQ 212
                                              GNEQERHQISH +MRFTHFEMIFGQ
Sbjct: 197 VRESQKIPAYLKKMLMENDYSHILDMYRAELQYYEGNEQERHQISHTEMRFTHFEMIFGQ 256

Query: 213 LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGL 272
           LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGL
Sbjct: 257 LGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGL 316

Query: 273 LNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNH 332
           LNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNH
Sbjct: 317 LNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNH 376

Query: 333 CKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS 336
           CKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS
Sbjct: 377 CKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLPRPS 426

BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EBQ1 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432742 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 1.94e-100
Identity = 165/249 (66.27%), Postives = 189/249 (75.90%), Query Frame = 0

Query: 110 DVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQI------------SHPKMRFTHF 169
           DVLRD+LL ENQLPMKLL KL+   S+   N++ +  +            +  +  + H 
Sbjct: 154 DVLRDMLLLENQLPMKLLDKLYL-MSMPEHNKKVKSLVWEFRNLPTEVKKTLLERDYLHL 213

Query: 170 ------EMIFGQLG----MRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGV 229
                 E++F +      ++ SHLGMGHEIQLA RFHKAGIK KKGCNL DV FD+ +GV
Sbjct: 214 LDMYRAELVFYKGNEWKPLQRSHLGMGHEIQLATRFHKAGIKFKKGCNLMDVYFDRKRGV 273

Query: 230 LSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVL 289
           LSLPFIEMNA+I+SGL+NAMAFEKL GI NIV SFVILMGNL+EKDEVDSFNQLAKG VL
Sbjct: 274 LSLPFIEMNAHIDSGLVNAMAFEKLYGIDNIVDSFVILMGNLMEKDEVDSFNQLAKGEVL 333

Query: 290 GLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGV 336
           G+WGHY  VY SVN HCKRPW+IWWTTLKDVNFQSPWTIIST  ALIGFA LIIQTVYGV
Sbjct: 334 GMWGHYNYVYNSVNEHCKRPWRIWWTTLKDVNFQSPWTIISTLSALIGFAFLIIQTVYGV 393

BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EF72 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432743 PE=4 SV=1)

HSP 1 Score: 302 bits (773), Expect = 2.06e-96
Identity = 171/289 (59.17%), Postives = 189/289 (65.40%), Query Frame = 0

Query: 107 PLEDVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQI------SHP--------KM 166
           P  D LRD+L+ ENQLP+KLL KL+         +QE +Q+      S P        K+
Sbjct: 161 PPRDTLRDMLVLENQLPIKLLDKLYSML------KQENNQLGLFLLNSSPLLIDIVFFKL 220

Query: 167 RFTHFE----------MIFGQLG-----------------------------------MR 226
            F +F           +++G L                                    +R
Sbjct: 221 SFLNFSVRERFSTIKSLVWGTLNFPTPTGVKEMLMEEDYLHVLHMYRKEVMFYNEQNRLR 280

Query: 227 LSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAM 286
            SHLGMGHEIQLARRFHKAGIKLKKGCN  DV FD+ KG L+LPFIEMNAN+ESGLLN M
Sbjct: 281 QSHLGMGHEIQLARRFHKAGIKLKKGCNFMDVGFDEKKGGLTLPFIEMNANVESGLLNVM 340

Query: 287 AFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNHCKRP 336
           AFEKL GI NIVGSFVILMGNL EKDEVDSFNQLAKGTVL LWG +  VY SVN H KRP
Sbjct: 341 AFEKLSGIANIVGSFVILMGNLPEKDEVDSFNQLAKGTVLELWGRFFNVYDSVNKHSKRP 400

BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EC85 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432746 PE=4 SV=1)

HSP 1 Score: 295 bits (754), Expect = 5.99e-96
Identity = 164/271 (60.52%), Postives = 185/271 (68.27%), Query Frame = 0

Query: 97  LLGRSPLWTLPLEDVLRDVLLPENQLPMKLLAKLWPNCSITRGNEQERHQISHPKMRFTH 156
           LL  S L TLP +D  RD+LL EN+LPM LL KL     +      E  ++    ++FT+
Sbjct: 4   LLDPSSLQTLP-KDAARDMLLLENKLPMMLLDKLGSMLKL------ENKKVKLLVLKFTN 63

Query: 157 F----------------------EMIF----GQ-------LGMRLSHLGMGHEIQLARRF 216
           F                      E+ F    GQ       LGM+L H+ MGHEIQLA RF
Sbjct: 64  FPTNVNEGLTKKDYSHLLDMYRAELQFQEGNGQKLLQHNHLGMKLEHVEMGHEIQLATRF 123

Query: 217 HKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFV 276
           HKAGIKLKKGCNL +V+FD+NKGV SLPFIEMNANIES  LN M FEKL GI NIVGSF+
Sbjct: 124 HKAGIKLKKGCNLTNVNFDENKGVSSLPFIEMNANIESSYLNVMVFEKLFGIDNIVGSFI 183

Query: 277 ILMGNLLEKDEVDSFNQLAKGTVLGLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSP 334
           IL+GNLLEKD+VDSF QLAKG  L + GHYP VY S+N HCKRPW+IWWTTLKDVNFQSP
Sbjct: 184 ILVGNLLEKDKVDSFYQLAKGKFLDMSGHYPYVYNSLNEHCKRPWRIWWTTLKDVNFQSP 243

BLAST of Cp4.1LG06g09990 vs. ExPASy TrEMBL
Match: A0A6J1EI35 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432766 PE=4 SV=1)

HSP 1 Score: 282 bits (722), Expect = 2.05e-89
Identity = 153/250 (61.20%), Postives = 179/250 (71.60%), Query Frame = 0

Query: 110 DVLRDVLLPENQLPMKLLAKL----------------------WPNCSITRGNEQERHQI 169
           DV RD+LL ENQLPM LL KL                      W + S+  G  ++ +  
Sbjct: 143 DVQRDMLLLENQLPMMLLDKLYSILKPGKNKFVMHPLNVKSLVWESDSVGTGAMEKDYLH 202

Query: 170 SHPKMRFT-HFEMIFGQLGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDVDFDQNKG 229
                R+  +  ++     +++SHLG  HEI+LA RFHKAGIKL+KG NLR V FD+NKG
Sbjct: 203 LLDMYRWELNINVLPRWSKLQVSHLGTSHEIRLATRFHKAGIKLEKGWNLRAVSFDENKG 262

Query: 230 VLSLPFIEMNANIESGLLNAMAFEKLLGIGNIVGSFVILMGNLLEKDEVDSFNQLAKGTV 289
           +LSLPFIEMNANIESGLLNAMAFEKL GI NIVGSFV+LMGNLL+K EVDSFNQLAKG V
Sbjct: 263 ILSLPFIEMNANIESGLLNAMAFEKLSGIDNIVGSFVVLMGNLLKKGEVDSFNQLAKGEV 322

Query: 290 LGLWGHYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYG 336
           L    +Y +VY+ VN HCKRPW+IWWTTLKDVNFQ+PWTIIST  A IGF LLI+QTVYG
Sbjct: 323 LSFLDYY-SVYRLVNEHCKRPWRIWWTTLKDVNFQNPWTIISTLSASIGFVLLILQTVYG 382

BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 69.3 bits (168), Expect = 6.6e-12
Identity = 51/180 (28.33%), Postives = 75/180 (41.67%), Query Frame = 0

Query: 177 IQLARRFHKAGIKLKKGCNLRDVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKL-LGI 236
           I       +AGIK ++    R  D     G L +P + ++   +S  LN +AFE+  +  
Sbjct: 350 IHCVTELKEAGIKFRRRKTDRFWDMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDS 409

Query: 237 GNIVGSFVILMGNLLEKDE---------------------VDSFNQLAKGTVLGLWGHY- 296
            N + S++I M NL++  E                      D FN+L +  V      Y 
Sbjct: 410 SNDITSYIIFMDNLIDSHEDVSYLHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYL 469

Query: 297 PTVYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLP 334
             +   VN +    W  W  TLK   F +PW I+S   A+I   L   Q+ Y VY YY P
Sbjct: 470 SRLSIEVNRYYDHKWNAWRATLKHKYFNNPWAIVSFCAAVILLVLTFSQSFYAVYAYYKP 529

BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT5G22550.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-10
Identity = 44/178 (24.72%), Postives = 78/178 (43.82%), Query Frame = 0

Query: 180 ARRFHKAGIKLKKGCNLR-DVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKL-LGIGN 239
           AR+    GIK  +  N+   +D     G++ +P +  +  I + L+N +AFE+  +    
Sbjct: 262 ARKLRLRGIKFMRKENVETPLDISFKSGLVEIPLLVFDDFISNLLINCVAFEQFNMSCST 321

Query: 240 IVGSFVILMGNLLEKDEVDSF--------NQLAKGTVLGLW--------------GHYPT 299
            + SFVI MG L+  ++  +F        N    G  + L+                   
Sbjct: 322 EITSFVIFMGCLINTEDDATFLIEKGILENYFGTGEEVSLFFKNIGKDISFSISKSFLSN 381

Query: 300 VYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLP 334
           V++ VN +  + + + W   K  +F +PWT +S+  AL+   L I Q  +  Y Y+ P
Sbjct: 382 VFEGVNEYTSQGYHVHWAGFKYTHFNTPWTFLSSCAALVLLLLTIFQAFFAAYAYFRP 439

BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT5G22550.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 63.5 bits (153), Expect = 3.6e-10
Identity = 44/178 (24.72%), Postives = 78/178 (43.82%), Query Frame = 0

Query: 180 ARRFHKAGIKLKKGCNLR-DVDFDQNKGVLSLPFIEMNANIESGLLNAMAFEKL-LGIGN 239
           AR+    GIK  +  N+   +D     G++ +P +  +  I + L+N +AFE+  +    
Sbjct: 311 ARKLRLRGIKFMRKENVETPLDISFKSGLVEIPLLVFDDFISNLLINCVAFEQFNMSCST 370

Query: 240 IVGSFVILMGNLLEKDEVDSF--------NQLAKGTVLGLW--------------GHYPT 299
            + SFVI MG L+  ++  +F        N    G  + L+                   
Sbjct: 371 EITSFVIFMGCLINTEDDATFLIEKGILENYFGTGEEVSLFFKNIGKDISFSISKSFLSN 430

Query: 300 VYKSVNNHCKRPWKIWWTTLKDVNFQSPWTIISTFYALIGFALLIIQTVYGVYGYYLP 334
           V++ VN +  + + + W   K  +F +PWT +S+  AL+   L I Q  +  Y Y+ P
Sbjct: 431 VFEGVNEYTSQGYHVHWAGFKYTHFNTPWTFLSSCAALVLLLLTIFQAFFAAYAYFRP 488

BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT3G47250.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-09
Identity = 49/207 (23.67%), Postives = 84/207 (40.58%), Query Frame = 0

Query: 150 PKMRFTHFEMIFGQLGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDV-DFDQNKGVL 209
           P  +F H +   G++    S   +   I  A+R    GIK +   +   + D    K  L
Sbjct: 273 PSSKFQHSKGKSGEVSSSESTFPL---ILSAKRLRLQGIKFRLRSDAESILDIKLKKNKL 332

Query: 210 SLPFIEMNANIESGLLNAMAFEKLLGIG-NIVGSFVILMGNLLEKDEVDSFNQLAKGTVL 269
            +P + ++  I S  LN +AFE+      N + S+V+ MG LL   E  +F    K  + 
Sbjct: 333 QIPLLRLDGFISSIFLNCVAFEQFYTESTNDITSYVVFMGCLLNDQEDATFLNNDKRIIE 392

Query: 270 GLWG-----------------------HYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPW 329
             +G                       +   V++ VN +  + +   W   +  +F+SPW
Sbjct: 393 NYFGNENEVSQFFKTICKDVVFDTRRSYLRNVFEGVNEYTSKTYNGVWAGFRHTHFESPW 452

Query: 330 TIISTFYALIGFALLIIQTVYGVYGYY 332
           T +S+F  +    L + Q  Y +  YY
Sbjct: 453 TALSSFAVVFVILLTMTQAAYAIRSYY 476

BLAST of Cp4.1LG06g09990 vs. TAIR 10
Match: AT3G47250.2 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 62.0 bits (149), Expect = 1.1e-09
Identity = 49/207 (23.67%), Postives = 84/207 (40.58%), Query Frame = 0

Query: 150 PKMRFTHFEMIFGQLGMRLSHLGMGHEIQLARRFHKAGIKLKKGCNLRDV-DFDQNKGVL 209
           P  +F H +   G++    S   +   I  A+R    GIK +   +   + D    K  L
Sbjct: 273 PSSKFQHSKGKSGEVSSSESTFPL---ILSAKRLRLQGIKFRLRSDAESILDIKLKKNKL 332

Query: 210 SLPFIEMNANIESGLLNAMAFEKLLGIG-NIVGSFVILMGNLLEKDEVDSFNQLAKGTVL 269
            +P + ++  I S  LN +AFE+      N + S+V+ MG LL   E  +F    K  + 
Sbjct: 333 QIPLLRLDGFISSIFLNCVAFEQFYTESTNDITSYVVFMGCLLNDQEDATFLNNDKRIIE 392

Query: 270 GLWG-----------------------HYPTVYKSVNNHCKRPWKIWWTTLKDVNFQSPW 329
             +G                       +   V++ VN +  + +   W   +  +F+SPW
Sbjct: 393 NYFGNENEVSQFFKTICKDVVFDTRRSYLRNVFEGVNEYTSKTYNGVWAGFRHTHFESPW 452

Query: 330 TIISTFYALIGFALLIIQTVYGVYGYY 332
           T +S+F  +    L + Q  Y +  YY
Sbjct: 453 TALSSFAVVFVILLTMTQAAYAIRSYY 476

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SD532.4e-0624.58UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
P0C8977.6e-0523.70Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ... [more]
Match NameE-valueIdentityDescription
XP_022925444.14.47e-15379.18UPF0481 protein At3g47200-like [Cucurbita moschata][more]
KAG7025179.19.73e-10666.67UPF0481 protein [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023535502.19.54e-10465.52UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo][more]
XP_023535324.18.76e-10267.47UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo][more]
XP_022925442.14.01e-10066.27UPF0481 protein At3g47200-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1EC692.17e-15379.18UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432744 PE=... [more]
A0A6J1EBQ11.94e-10066.27UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432742 PE=... [more]
A0A6J1EF722.06e-9659.17UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432743 PE=... [more]
A0A6J1EC855.99e-9660.52UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432746 PE=... [more]
A0A6J1EI352.05e-8961.20UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111432766 PE=... [more]
Match NameE-valueIdentityDescription
AT3G50120.16.6e-1228.33Plant protein of unknown function (DUF247) [more]
AT5G22550.13.6e-1024.72Plant protein of unknown function (DUF247) [more]
AT5G22550.23.6e-1024.72Plant protein of unknown function (DUF247) [more]
AT3G47250.11.1e-0923.67Plant protein of unknown function (DUF247) [more]
AT3G47250.21.1e-0923.67Plant protein of unknown function (DUF247) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 255..317
e-value: 1.0E-8
score: 34.9
coord: 41..96
e-value: 7.0E-7
score: 28.8
coord: 176..254
e-value: 4.7E-11
score: 42.6
IPR004158Protein of unknown function DUF247, plantPANTHERPTHR31549PROTEIN, PUTATIVE (DUF247)-RELATED-RELATEDcoord: 38..97
IPR004158Protein of unknown function DUF247, plantPANTHERPTHR31549PROTEIN, PUTATIVE (DUF247)-RELATED-RELATEDcoord: 108..329
NoneNo IPR availablePANTHERPTHR31549:SF210PROTEIN, PUTATIVE (DUF247)-RELATEDcoord: 38..97
NoneNo IPR availablePANTHERPTHR31549:SF210PROTEIN, PUTATIVE (DUF247)-RELATEDcoord: 108..329

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g09990.1Cp4.1LG06g09990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane