Cp4.1LG06g08970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g08970
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein NDR1-like
Location	Cp4.1LG06: 4700435 .. 4701037 (-)
RNA-Seq Expression	Cp4.1LG06g08970
Synteny	Cp4.1LG06g08970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAATCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCCATCGAACATTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCTTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACACTCGTCGGCCGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAAGGCCGCGGCAAGAAGGCGTTCAGAAACGAGACCATCGAGACCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGATTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCAGAGTTCAAAGTCAACGGGCAGGGAGCGACGGAATACCCAGGGATTACGCTTAGCTCCGGCGCCGCCGTGCTCGACGGCTCGCCGGTGAGGGTTATTTGGAGTTTTTGGGTGTTTGTGTTGTGGAAACTTTTCTGA

mRNA sequence

ATGACGGAATCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCCATCGAACATTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCTTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACACTCGTCGGCCGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAAGGCCGCGGCAAGAAGGCGTTCAGAAACGAGACCATCGAGACCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGATTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCAGAGTTCAAAGTCAACGGGCAGGGAGCGACGGAATACCCAGGGATTACGCTTAGCTCCGGCGCCGCCGTGCTCGACGGCTCGCCGGTGAGGGTTATTTGGAGTTTTTGGGTGTTTGTGTTGTGGAAACTTTTCTGA

Coding sequence (CDS)

ATGACGGAATCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCCATCGAACATTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCTTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACACTCGTCGGCCGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAAGGCCGCGGCAAGAAGGCGTTCAGAAACGAGACCATCGAGACCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGATTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCAGAGTTCAAAGTCAACGGGCAGGGAGCGACGGAATACCCAGGGATTACGCTTAGCTCCGGCGCCGCCGTGCTCGACGGCTCGCCGGTGAGGGTTATTTGGAGTTTTTGGGTGTTTGTGTTGTGGAAACTTTTCTGA

Protein sequence

MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVLDGSPVRVIWSFWVFVLWKLF

Homology

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BLAST of Cp4.1LG06g08970 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 95/214 (44.39%), Postives = 127/214 (59.35%), Query Frame = 0


Query: 2   TESG-GCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI++F+IPAL +  NS  N+T++F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPL--------GNVTVPGFHQGRGKKA------ 121
            +R  N NKDK ++YD ++LN + +    +        GN TVP F+QG  KKA      
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 --FRNETIETRGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQG 181
               N+T+       +AV  NGSA+FRLDL T VRFKI+FW TKR  + VGA+ +VNG G
Sbjct: 128 KPLNNQTV------LRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 187

Query: 182 A-TEYPGITL---SSGAAVLDGSPVRVIWSFWVF 195
              +  GI +    S   +    P+ V+ +  VF
Sbjct: 188 VKAQKKGIKMKKSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of Cp4.1LG06g08970 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409 bits (1050), Expect = 5.71e-144
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWK 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWK
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWK 120

Query: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL 180
           AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL
Sbjct: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL 180

Query: 181 DGSPVRVIWSFWVFVLWKLF 200
           DGSPVRVIWSFWVFVLWKLF
Sbjct: 181 DGSPVRVIWSFWVFVLWKLF 200

[Close]

BLAST of Cp4.1LG06g08970 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 393 bits (1009), Expect = 1.26e-137
Identity = 195/206 (94.66%), Postives = 197/206 (95.63%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG------RRPLGNVTVPGFHQGRGKKAFRNETIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG      RRPLGNVTVPGFHQGRGKKAFRNETIET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVLDGSPVRVIWSFWVFVLWKLF 200
           SGAAV DGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of Cp4.1LG06g08970 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 391 bits (1005), Expect = 5.15e-137
Identity = 194/206 (94.17%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG------RRPLGNVTVPGFHQGRGKKAFRNETIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG      RRPLGNVTVPGFHQGRGKKAFRNETIET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVLDGSPVRVIWSFWVFVLWKLF 200
           SG AV DGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGVAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of Cp4.1LG06g08970 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390 bits (1003), Expect = 1.04e-136
Identity = 194/206 (94.17%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG------RRPLGNVTVPGFHQGRGKKAFRNETIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG      RRPLGNVTVPGFHQGRGKKAFRNE IET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVLDGSPVRVIWSFWVFVLWKLF 200
           SGAAV DGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of Cp4.1LG06g08970 vs. NCBI nr
Match: XP_022976581.1 (protein NDR1-like [Cucurbita maxima])

HSP 1 Score: 389 bits (1000), Expect = 2.41e-136
Identity = 193/200 (96.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWK 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG RPLGNVTVPGFHQGRGKKAFRNETIE RGVDWK
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120

Query: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL 180
           AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLSSGAAV 
Sbjct: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180

Query: 181 DGSPVRVIWSFWVFVLWKLF 200
           DGSPV VIWS WVFVLWKLF
Sbjct: 181 DGSPVTVIWSSWVFVLWKLF 200

[Close]

BLAST of Cp4.1LG06g08970 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 2.49e-137
Identity = 194/206 (94.17%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG------RRPLGNVTVPGFHQGRGKKAFRNETIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG      RRPLGNVTVPGFHQGRGKKAFRNETIET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVLDGSPVRVIWSFWVFVLWKLF 200
           SG AV DGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGVAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of Cp4.1LG06g08970 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 1.16e-136
Identity = 193/200 (96.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWK 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG RPLGNVTVPGFHQGRGKKAFRNETIE RGVDWK
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120

Query: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL 180
           AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLSSGAAV 
Sbjct: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180

Query: 181 DGSPVRVIWSFWVFVLWKLF 200
           DGSPV VIWS WVFVLWKLF
Sbjct: 181 DGSPVTVIWSSWVFVLWKLF 200

[Close]

BLAST of Cp4.1LG06g08970 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 313 bits (803), Expect = 1.37e-106
Identity = 158/201 (78.61%), Postives = 170/201 (84.58%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE+GGC RCCFSFILTSGF ALFLWLSLRT KPKCSIE FYIPALNQSLNS  +STV F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLV--GRRPLGNVTVPGFHQGRGKKAFRNETIETRGVD 120
           DLRLKNQNKDKSVFYD++NLNLTLV  GRRP+GN+TV GFHQGR KKAFR   +E RGVD
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVDGGRRPVGNLTVAGFHQGRDKKAFRKGQVEARGVD 120

Query: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYP-GITLSSGA 180
           WKAV RNGSA+FRLDLATAVR+KILFW TKR+NLRVGAE KVN QGA EYP GITLSSGA
Sbjct: 121 WKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLSSGA 180

Query: 181 AVLDGSPVRVIWSFWVFVLWK 198
           AV   SP   +WS    +LWK
Sbjct: 181 AVAGRSPAGALWSVGALILWK 201

[Close]

BLAST of Cp4.1LG06g08970 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 2.73e-104
Identity = 154/202 (76.24%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNST-VS 60
           MTESG CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NST + 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSLNLNLTLV--GRRPLGNVTVPGFHQGRGKKAFRNETIETRGV 120
           FDLRLKNQNKDKSV+YD++ LN TL+   RRP+GN+TVPGFHQGR KKA R E++E RGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYP-GITLSSG 180
           DWKAVSRNGS I RLDLATAVR+KIL W TKRENLR+G E KVNGQG  + P GITL+SG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVLDGSPVRVIWSFWVFVLWK 198
           AA+  G+ VRVIWSFWVFV WK
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWWK 202

[Close]

BLAST of Cp4.1LG06g08970 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 2.73e-104
Identity = 154/202 (76.24%), Postives = 172/202 (85.15%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNST-VS 60
           MTESG CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NST + 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSLNLNLTLV--GRRPLGNVTVPGFHQGRGKKAFRNETIETRGV 120
           FDLRLKNQNKDKSV+YD++ LN TL+   RRP+GN+TVPGFHQGR KKA R E++E RGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYP-GITLSSG 180
           DWKAVSRNGS I RLDLATAVR+KIL W TKRENLR+G E KVNGQG  + P GITL+SG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVLDGSPVRVIWSFWVFVLWK 198
           AA+  G+ VRVIWSFWVFV WK
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWWK 202

[Close]

BLAST of Cp4.1LG06g08970 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41
Identity = 95/214 (44.39%), Postives = 127/214 (59.35%), Query Frame = 0


Query: 2   TESG-GCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI++F+IPAL +  NS  N+T++F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPL--------GNVTVPGFHQGRGKKA------ 121
            +R  N NKDK ++YD ++LN + +    +        GN TVP F+QG  KKA      
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 --FRNETIETRGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQG 181
               N+T+       +AV  NGSA+FRLDL T VRFKI+FW TKR  + VGA+ +VNG G
Sbjct: 128 KPLNNQTV------LRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 187

Query: 182 A-TEYPGITL---SSGAAVLDGSPVRVIWSFWVF 195
              +  GI +    S   +    P+ V+ +  VF
Sbjct: 188 VKAQKKGIKMKKSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of Cp4.1LG06g08970 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-36
Identity = 81/175 (46.29%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKN 66
           CC C F FI T+   AL LWLSLR +KPKCSI++FYIPAL+++L+S  N+T++F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDSLNLNLTLVGRRP--------LGNVTVPGFHQGRGKKA--------FRNE 126
            NKDK ++YD ++L  + +            + N TVP F+QG  KKA          N+
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLNNQ 133

Query: 127 TIETRGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTK-RENLRVGAEFKVNGQG 165
           T+       +AV  NGSA+FRLDL T VRFKI+FW TK    ++VGA+ +VNG G
Sbjct: 134 TV------LRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDG 182

[Close]

BLAST of Cp4.1LG06g08970 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 118.6 bits (296), Expect = 5.6e-27
Identity = 75/187 (40.11%), Postives = 105/187 (56.15%), Query Frame = 0


Query: 13  SFILTSGFAALFLWLS-LRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKNQNKDK 72
           + +  S   AL LWLS L    P+CSI +FYIPALN+SL S  N+T++F +RLKN N  +
Sbjct: 19  TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQ 78

Query: 73  SVFYDSLNLNL-TLVGRRPL--GNVTVPGFHQGRGKKA--------FRNETIETRGVDWK 132
            ++Y+ L+L+  T +    L   N TVP F+QG  KKA        F N+T+       +
Sbjct: 79  GIYYEDLHLSFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV------IQ 138

Query: 133 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL 188
           AV  NGSAIFR+DL   V++K++ W TKR  L+     +VN  GAT+           + 
Sbjct: 139 AVLPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMKIS 198

[Close]

BLAST of Cp4.1LG06g08970 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-09
Identity = 45/168 (26.79%), Postives = 73/168 (43.45%), Query Frame = 0


Query: 11  CFSFILT---SGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKNQ 70
           C  F+L     G  A  LWLSLR  +P+  I+ F +  L+Q      N+ ++F++ + N 
Sbjct: 47  CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVE-NARIAFNVTILNP 106

Query: 71  NKDKSVFYDSLNLNL----TLVGRRPLGNVTVPGFHQGRGKK----AFRNETIETRGVDW 130
           N+   V++DS+  ++      VG  PL N   P F Q              ++      W
Sbjct: 107 NQHMGVYFDSMEGSIYYKDQRVGLIPLLN---PFFQQPTNTTIVTGTLTGASLTVNSNRW 166

Query: 131 KAVSRN---GSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQG 165
              S +   G+  FRLD+ + +RFK+  W +K   +       V   G
Sbjct: 167 TEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDG 210

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g08970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	1.5e-40	44.39	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of Cp4.1LG06g08970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535135.1	5.71e-144	100.00	protein NDR1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7024897.1	1.26e-137	94.66	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022935836.1	5.15e-137	94.17	protein NDR1-like [Cucurbita moschata]	[more]
KAG6592022.1	1.04e-136	94.17	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022976581.1	2.41e-136	96.50	protein NDR1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG06g08970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5U5	2.49e-137	94.17	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A6J1IH99	1.16e-136	96.50	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]
A0A6J1CEH8	1.37e-106	78.61	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A5A7TYN2	2.73e-104	76.24	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	2.73e-104	76.24	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]

BLAST of Cp4.1LG06g08970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	1.1e-41	44.39	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	2.3e-36	46.29	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	5.6e-27	40.11	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	5.3e-09	26.79	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 1..178
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g08970.1	Cp4.1LG06g08970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane