Cp4.1LG06g07840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG06g07840
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionsmall RNA degrading nuclease 5-like
LocationCp4.1LG06: 5702528 .. 5712068 (+)
RNA-Seq ExpressionCp4.1LG06g07840
SyntenyCp4.1LG06g07840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACGCACAAAGAGTAAGGCAAATTGATGGGTTTTGATTCACAGCCTTCCATGGGCGCAGGGCTTTCGAGTTAAAGACTTGCAGGAACTTCTTTCGCCTCAGAAAACAACACTATGCCATCTTCCAGTGTTTCAGCTTTGGATGCCAAAGAAGAGGGCAAGTCGAACGTGGGCAATACGGAGGAGGAGGAGGATAAGCCCAGCTTCTTCGATATCTATGGAACCGATGTATGCATTCTCTTCTTCATCATTCAGCTGCCCATTTGCCTTTTCAAGCCCTTGATTCTTATTGTCGTTAAATCAATAAAGGGGTGTTAGTATTTCCTTGAATTGCATAGGTTTTTTATCCTCCAAGAACTTAATGGCATTGGATAACATAGTGAATTCTGCTTACTTTGATTCCTCTTGTAGGCTAAAGCTGAGGTTCTTTTCAAAACACCAGAATCTAATTCAACTTTAAGTCTGCAAGTGAGTTTGCTTAGTTGCCAAGTTTCTTATAATGTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGGATGTTCAAGGGCTTGTAACTTGGGTTCTTGCTGAAGGTTTCATGCCATCGTGGGTTTTTATCAAGGTCAATACCTTTTCAACTTTTACTTGATATCTCTAACTTGAAATTTTGTGTAAGAAGAGACCTGACTATGAACGTTATGTTGTTAGATGGAAATCGAATACGGTGTTGTTTGTTAATTTAAACGTCTACACTTTATGGTGTGATGTATCGTCATAACTCTCATTTAGTTCATAACCCTTTTGGTTCATATTCTCGTTTATTTGGTTCATGCCTATATAAAAGCTTGTCTAGCATTGTTTTGAGGTGTCGAGTCATTACCATTTTGTATTTGTCTAGAAGCAATTGAGAGGGACTTTGTAAAAGAAACTTTGTAGTGTGAGAGTGTGAGAGATACACTTGTAAACACTTTGGTTATAGTGATTGGCTACCACCCGTGGATATAGGGTAACTTCTTCTCTCCGAACCACGTAAATCGTTGTATCTCTTTGTTAGTATATATTTGTGGGTGTGTGAGTGCAATTGATCTTGCTTCCGCTTCCGCTACAACAATTGAGTATCAGAACATTTTGGTTGTGGCATTTGGGTACAACGAGTGGTATCAGAGCATTGAAAGTTGTGGCATTACGGCACAAACACTTCAGATATATGTTAGCTGCCTTCCGTCTTTTTTGCTTAAAGAGAGTTTCCTCCTTTCCTTTCTTCACTTCCATCACATATAATTATTTTTGAACTGAGATTGTTAGTTTGTCTTAGAAAGATTTCTTGGAAGTACTTAAAGAGTTAAATATTTGCAGAATAAACCCCTAATCCCAAAAGTGGTCATGGTTTATCTCCCTGGCCTGGATGCTGCTCTATACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGTGGCAGTCCAAGGCCAGTTTTAGCTCTTAGGTACACGTTCGTTTATTGAACGTTGCATTTATTTACGTTTTAGAATGTTTCTGGGATTTACTTATGGTGCAGTCCTTATGTTTTCATTCTTTGTATTTTGGTAGCTGTATTTCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGGAAGAGAGATGCAAACAGTGTAGACTTAAAGAATAAATTGACGTCTGAACAAGGTTTGTGAGCCATTGGCAAACTTAGATTTTGTCTAGCTCTTCGGCTGTTTATTTTCTTCTTGTGTTGTTTTAGTGTTCTTTTTATTCCTTTGTAGGAGTAGGGAATTTTATACTCTATTACCACATTGCTATTATCAATGTTACCATCTTGTTTTCGTCGTTGGGGGTATAACGCGGTGATAAACTTTTATGAGTGTAAAAATGTGCTACAAGGAGTTTAAAGGTGTGTCTACATAATTATGTGGGCATCAAGACCTATATTGTAATAGCCCAAGCCCATCCAACCGATGTGGGATCTATTAGGGTGTGAAAGCCTCTCCCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGCCTGAAAAGAAAAGCCCAAAGAAGACAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAAAACACTGGGCGATGTGCCAGTGAGGAAGCTGATCCTTGAAGGAGGGTGGACATGAGGCGGTGTGTCAGACGTTGGGTCCTGAAGGGGGGTGGATTGGGGAGTCCCACATCGATTCGAGAACGGAACGAGTGCCAGCGAGGATGTTGGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGGAACATTCTTTATAAGGGTGTGGAAACCATTTTCTAGTAGACGTGTTTTAAAAACCTTGAGGGGAAGCCAGAAAGAGAAAGCCCAAAGAGGACAATGTCTGCTAGTGGTGGGCTTGGGCTATTTCAAATGGTATCAGAGCCAGACACCGGGCGATGTGCCAGCGAGGAGACTGATCCCCGAAGGGGGGTGGACATAAGGCGGTGTGCCAGACGCTGAGTCCCGAAGGGGGTGGATTGGGGAGTCCCACATCGATTGGAGAAGGGAACTAGTGCCAGCGAGGACTCTGGGCCCTGAAGGGGGGTGGATTGTGAGAACTCACATCAGTTGGGGAGGAGAACGGAACATTCTTTATAAGGGTGTGGAAACTTTTCCCTAGTAGACGCGTTTTAAAAACCTTGAGAGGAAGCCATAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGAGTTGTCTCAAATGGTATCAGAGCCAGACACCGGGCAATGTACCAGCAAGGAGGTTGATCTCCGAAGGGGGGTGGATTGGGGAGTCTCACATCAATTAGAGAAGGGAACGAGTGCCAGCGAGGACTTTGGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAACCTTAAGGGGAAGCCCGAAAAAGGAAAAACCCAAATAGGACATTATCTGCTAGCAGTAGGCTTGAGCTGTTACATATACATTCTCCCAAGAAGAAGGCATTTTAGTGGCAATATATTTGTTGAAAGTGGTTTTGATGCCTTTTATCCACTCTTGCATTATGATGAACTAACCTTTTAGTGGCAATATACTTCTTGGACTGTGCAGAAATATTTGGCCCTGAAAAAGACTCACCAATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACACTAACTGCCAAAGAACTGGAAGACAATGGCTATCCATTCAATCAACCAGGTGATTTATCTTTATTACTTAATCGTTTTCGTTAGCTTTGAAAGCTCTATTTTCACCTTTTTCCGAAGTTAACTATCATGGATCCTCTCTCCCACCCTCACTGAAACTTCTTTTCGAGTTAGAAATTTCCGTAACTTAATTATTCATTTGATTCAGGTTTTATCCAAACACTTCCTGCTCCTATGGGATCTTCACCTTATGAAATGTTGGCACTTGACTGTGAAATGGTAAGTCTATTGTTTGTATGAAAGTTGTTTATAAGTGGAATGTTTATGTTACTGTCTACTTAGTCAGCGAAGACTCGATAATTCTCTTTGATTGTAACTCTTGATTTAAGATAATCATTTAATTCTTTTTTGGACTTCTATTAGTGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGACATGGCAGGACAGGTATGCACTCCATCTCTGCTTCGGTTACGTGCTTTGGCGAAAGCGTTGGATATTTGTACGAGGAAACTTAACTAATGCTTTGAAGACTTTAAATCATGTTCTTGATAGTTTGTGCAACCATCTGTATTTGAGACTTTAAATCCAGTTTGTTGAACTAAAGTTTTAAACCAGCTATGTCTGTTTTGAGTTAACATAGTACTACAATTTTTATTATGTCACAACTATCTGTATTTGATCTTGTTTTTATGTCAATATGTTATACTTCTACGTGTCCGATTTTTTTCATTTATTACCTTTTCCTGATTATTTCAGATCGTCCTCGACAAATTGGTAAAGCCATCAAATGCAATTGTTGATTACAATACGAGGTAAGATCTTCTTGAGCTTTTAGTAGACAATAGACTGGATGTCTCATATAAAACAAATCTCATCAAGAGAAGTTTTATGATGTGAAAATTGTAGCTTCCTGTATTTGATTGATATGATGGTTTATCAAGTCGTTTTAGTTATATTGCATGTTTTACTATTCTTTAAATTACTTACCTTCGACAATGATGCTTGTTTTGTTTTGTTTTTGGATAAGAACGTGTAAGTGTGTAATAGTCCAAGCCTATCGTTAGCAGATATTGTCTTCTTTGGGCTTTCCCTCTCGGGATTCCCTTTAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCATATAAAGAATGTTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCCCTTCAGGGTCCAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCACCCTCCAATCCACCCCTTTTGAGGTCTAGTGTCCTTGTTGGCACACCGCCTCGTGTCCACCCCCCTTCGAGGCTCAACCTCATTGCTGGCACATCACTCGGTATCTGGCTCTGATACCATTTGTAATAGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAGCACGTCTGCTAGGGAGAGGTTTCCACATCCATATAAAGAATGTTTCATTCTCCTCCCCAACCGATGTGGGATCTCACAATCCATCCACCCCCCTTCAGGACTAGAGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTAGGACCACCCCCCAATCCACCCCTTTTGAGGCCTAGCGTCCTTGCTGGCACACCGCCTCGTGCCAATCCCCTTCGGGGCTCAGCCTCATCGCTGGCACATTGCCCGGTGTTTAGCTCTGATATCATTTGTAATAGCCCAAATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCAGGCTTCCCTTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTTCACACCCTTATAAAGAGTGCATCGTTTTCCTATCTAAACCGATGTGGCATCTCACAAAAGTGAGTATATTCAAACTAACTAAACAGATACCTTTGGGCTCGGGGTAGAGGAATCCCCCTCCCAAAAAGAACTAACACAAAAAGGCTTTCTATTTTCTAATAATCATGGAAAACTGTAATCACAAAGATCTTTGCATAAAAAAATATAAAACTGTAATTAATGAAGAAATTTTTATGGTTTGAACACTACCAAGAGGTCAAGTTCTGATACTAAAAACAAAAGAAGCCTCAACATTCAACTTGTTCACAAATAGTCTAAGATTCCTTTCCTTTCACCGAAGCCAAAAGAAATCTTTATGGTTGATCTCCACTTAGGTAACTAATGCTTAAAGGGTAGAGAACTTTTGGGTGTACAAGAAGTTCTTAGGTTATCTTGGGTGTTAATGCCAGGCGCCCGACGTGACCGTATGGCTGCTTTTCTCTAATTCACTTGTCTTCATATAGTCTCAAGGCGGAATATACTAATGAAAAACGAGGAGCTAATCTCGTTCGCTTTTTCATGTGTCTTTTAACAGGTTTAGTGGAATTACATGTGAAATGTTAAATGAGGTTACCACTAGTCTAGAAGATGTTCAGGTTCTCTCTTTGACACTGTACTCACTGATGTTATCTACTTGCAGCAATCATTGTTTGAGGGAACTTTCTAATGTATTGGTGGTAAATGTACATTGCAGAAAGATTTTTTGAATCTTGTTCACAAGGAGACTGTTCTAGTTGGTCATTCACTGGAGAATGACCTGATGGCATTGAAGATCTCTCACGATCTCGTCGTTGATACTGCCGTTCTATATAAGCATCCCCGTGGTGGCTCTCATAAATCCGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAGGGAGATACAGCAATCTAGCAATGGCCACGATAGTGTCGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGTAAGTGACATTCTACCGTCATTTTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAACCACCATTTATATGGGTGTGGAAACCTTCCCCTAGTAGATGCGTTTAAAAGCCTTGAGGGGAAACCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACTGGACGATGTGTCAGCNACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATCAGAGCCAGACACTGGACGATGTGTCAGCCTTCTTGCTATTCTCCGAAGGGGGTAGACACGAGGCGGTGTGCTAGTAAGGACGCTGGGCTCCAAAGGGGGGTGGATTTGGGGGCGGTCCCACATCGATTAGAGGAAGGAAAGAGTACCAGCGAGGACGCTGGGCCTCGAAGGAGGGTGGATTATGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGGAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGATCTGGGTCGTTAAAAATGGTATCAGAGCCAGACACCGGACTATGTGCTAGCCTTCTCGTTGTTCCCCAAAGGGGGGTAGACACACCTTGAGGGGGAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGATCTGGGTCGTTAAAAATGGTATCAGAGCCAGACACCGGACTATGTGCTAGCCTTCTCGTTGTTCCCCAAAGGGGGATAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCAAAGGGGGGCGGTCTCACATCGATTGGAGGAAGGAAAGAGTGCAAGCGAGGACGCTGGTCCCCAAAGGAGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCTTTGAGGGGAAGCCCGAAAGGGAAAGGCCCAAAGAGGACAATATCTGCTAGCAGTGGATCTGGGTCGTTACGCTTTTGCATTGTAGAGTTCGGTCCTTAGCCTCACGTCGTGTTATAAACTCTGCAGGGTTCTTATTGTATGCCTTTTCTCTTGTTTTCAAACAGGACCGGAGTTCGGATCACCTCCATCGTTAGTCCGAAAGAAGCTACTTAACATACTTGGTGAGAGCGGAAAGATGTCTTCTTTCATTGACGATGTTTCAACCGTGAAGAGATATTCCTCCGAATCATCACATGCATTCCCTGTAACATCTGATGATGAAGCTCTTGCAAAGGCAAAAAAAGAGGTTGGCTAGCTGCTGATTGCATTTGTCTGAAAATTCATTCATAACTCATATCCTAATAGTTTGTTTGTGCCTATTATTGTTTTAGGCAATGAATGAAAGAGTTCACTTCGTTTGGACACAATTTTCTGAATTGAATTCTTACCATAAGAAGCAAGCAGATGATGAAGAAAGATTGAATGTAAAGCTTGCAGAGTTGTTGTCATTAGTTACTTGTGATACAAAATCTGTCAGCAAGAAAAGGAACAGCCCCAAGATCTGTGTCGAACAACGAGAAATTTTGGCTCGTATCGATTCAAGAATCGATAGCCTCTATGCCTCGCTACCTACGAATGCTATGCTTATTATTTGCACGGGTCACGGTGACATAGCACTTGTACAGAGGTATGTGCTTAATGCTTCTGAGATTAGATATCAGTTCCATTTAGTGTTGTATGTTCTTACTGCCTTTGAGTATCAATGTTAAGTTGCTAAGAATCTAGCACGTATTAGAACATGGATGATAAAATTCTGCGGACCACCTTTCTGTGTTACTGGGATTAACACTTTCTGCCTGCTCCATTAGAAGCTTTCATGTAGTAATTACTTTGATCCATGAAAAACTTGTTAGCTGAGTTCAATGTGATTAGTTTCGGGAACGAGTGCCAGCGAGGATGCTGGATCCCGAAGGAGGGTGGATTGTGAGATCCATCCCACTTTGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTAGAAACCTCTTCCTAGCAGACACGTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGGAAAGCCTGAAGAGGACAATATCTGCTAGCGGTGGGGTTGGGCTGTTATAAGCTTGTTCTGTTATCACCTTCCCTTGTGCTATATTAGTGGCCTTCATTTTCATCAATCGAATTATTTTGCTATTTGATGGTGGGAAAGATAATTAGCTTGTTGAAAGGGATATTAGTATTGGTGGGCACAACCGGTTATAACAGTGAGATCCCACGTTGGTTGGAGAGGGGAACGAAGCATTGTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAATCTTGAGGGGAAACCTGGAAGTGAAAGTCCAACGAAGACAATATCTGCTAGCGGTGAGCTTGGGCTGTTAGAAATGGTATTAGAACTAGACACCGGGTGGTGTGTGCCAGCAAGGACGCTGGCTCCCAAGGGGGGTGGATTGTGAAATCCCACTTGGTCGTAGAGGGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAGCCTTGAGGAGAATCCCAGAAAGGAAAGCCCAAAGACGATAATATCTACTAGCGGTGGGTTTGAGCTATGTGAGATCCCACATCAGTTGGGGAGGAGAACGAAACATACCTTATAAGAGTGTGGAAACCTCTCCCTAGCAGATACGTTTTAAAAACCTTGAGGGACACCCCGAAAGGGAAAATCCAAAGAGGACAATATCTCCTAGCGGTGGGCTCAGACGGTTACAGGGATACTTTTCTAAACATGAGAGTTATAGTTTAAGACGACCGTGGTAGACATAACTACTTCATCCTCTTTTTTCTTTAGCTACTTATGTGTATATTGACTTATTTCACGAGACAATATATTTGATCTTACAACATCTCGAGTCGATACCTTAGAGTTTGAACATATTTGGATGTCTATGTATATGAATGTAGATTGAGAAAAATGCTAGTGGAGAAAAGTGAAACAAGCATATGCCGTGACAAGGTTGTCAAGATCTTTGAAGAGCTCCATGCCCAAGCTGAGGTAGCTCTCTGTTTTGTATGTATAAAGCATTGATTACTCAAATCCTTCCAAATTATAAGAGTTCAATACATGGGAGTAACACTCAAACATCTTACCTTTTGGTCGTTTATATGGTCGTTTATATATATCTGAACGAGTTGAGCTATTCTCAAATTGGCATATTCT

mRNA sequence

TACGCACAAAGAGTAAGGCAAATTGATGGGTTTTGATTCACAGCCTTCCATGGGCGCAGGGCTTTCGAGTTAAAGACTTGCAGGAACTTCTTTCGCCTCAGAAAACAACACTATGCCATCTTCCAGTGTTTCAGCTTTGGATGCCAAAGAAGAGGGCAAGTCGAACGTGGGCAATACGGAGGAGGAGGAGGATAAGCCCAGCTTCTTCGATATCTATGGAACCGATGCTAAAGCTGAGGTTCTTTTCAAAACACCAGAATCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTTCTTGCTGAAGGTTTCATGCCATCGTGGGTTTTTATCAAGAATAAACCCCTAATCCCAAAAGTGGTCATGGTTTATCTCCCTGGCCTGGATGCTGCTCTATACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGTGGCAGTCCAAGGCCAGTTTTAGCTCTTAGCTGTATTTCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGGAAGAGAGATGCAAACAGTGTAGACTTAAAGAATAAATTGACGTCTGAACAAGAAATATTTGGCCCTGAAAAAGACTCACCAATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACACTAACTGCCAAAGAACTGGAAGACAATGGCTATCCATTCAATCAACCAGGTTTTATCCAAACACTTCCTGCTCCTATGGGATCTTCACCTTATGAAATGTTGGCACTTGACTGTGAAATGATCGTCCTCGACAAATTGGTAAAGCCATCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATGTGAAATGTTAAATGAGGTTACCACTAGTCTAGAAGATGTTCAGAAAGATTTTTTGAATCTTGTTCACAAGGAGACTGTTCTAGTTGGTCATTCACTGGAGAATGACCTGATGGCATTGAAGATCTCTCACGATCTCGTCGTTGATACTGCCGTTCTATATAAGCATCCCCGTGGTGGCTCTCATAAATCCGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAGGGAGATACAGCAATCTAGCAATGGCCACGATAGACCGGAGTTCGGATCACCTCCATCGTTAGTCCGAAAGAAGCTACTTAACATACTTGGTGAGAGCGGAAAGATGTCTTCTTTCATTGACGATGTTTCAACCGTGAAGAGATATTCCTCCGAATCATCACATGCATTCCCTGTAACATCTGATGATGAAGCTCTTGCAAAGGCAAAAAAAGAGGCAATGAATGAAAGAGTTCACTTCGTTTGGACACAATTTTCTGAATTGAATTCTTACCATAAGAAGCAAGCAGATGATGAAGAAAGATTGAATGTAAAGCTTGCAGAGTTGTTGTCATTAGTTACTTGTGATACAAAATCTGTCAGCAAGAAAAGGAACAGCCCCAAGATCTGTGTCGAACAACGAGAAATTTTGGCTCGTATCGATTCAAGAATCGATAGCCTCTATGCCTCGCTACCTACGAATGCTATGCTTATTATTTGCACGGGTCACGGTGACATAGCACTTGTACAGAGATTGAGAAAAATGCTAGTGGAGAAAAGTGAAACAAGCATATGCCGTGACAAGGTTGTCAAGATCTTTGAAGAGCTCCATGCCCAAGCTGAGGTAGCTCTCTGTTTTGTATGTATAAAGCATTGATTACTCAAATCCTTCCAAATTATAAGAGTTCAATACATGGGAGTAACACTCAAACATCTTACCTTTTGGTCGTTTATATGGTCGTTTATATATATCTGAACGAGTTGAGCTATTCTCAAATTGGCATATTCT

Coding sequence (CDS)

ATGCCATCTTCCAGTGTTTCAGCTTTGGATGCCAAAGAAGAGGGCAAGTCGAACGTGGGCAATACGGAGGAGGAGGAGGATAAGCCCAGCTTCTTCGATATCTATGGAACCGATGCTAAAGCTGAGGTTCTTTTCAAAACACCAGAATCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTTCTTGCTGAAGGTTTCATGCCATCGTGGGTTTTTATCAAGAATAAACCCCTAATCCCAAAAGTGGTCATGGTTTATCTCCCTGGCCTGGATGCTGCTCTATACATGTCACAGTCCAAGATACTTCCTACATTTAAAAGATTCTGTGGCAGTCCAAGGCCAGTTTTAGCTCTTAGCTGTATTTCAGATAGAATGCAAACAATTGATGCACTTTTGACGTGTAAGGTAAAGAGGAAGAGAGATGCAAACAGTGTAGACTTAAAGAATAAATTGACGTCTGAACAAGAAATATTTGGCCCTGAAAAAGACTCACCAATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACACTAACTGCCAAAGAACTGGAAGACAATGGCTATCCATTCAATCAACCAGGTTTTATCCAAACACTTCCTGCTCCTATGGGATCTTCACCTTATGAAATGTTGGCACTTGACTGTGAAATGATCGTCCTCGACAAATTGGTAAAGCCATCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATGTGAAATGTTAAATGAGGTTACCACTAGTCTAGAAGATGTTCAGAAAGATTTTTTGAATCTTGTTCACAAGGAGACTGTTCTAGTTGGTCATTCACTGGAGAATGACCTGATGGCATTGAAGATCTCTCACGATCTCGTCGTTGATACTGCCGTTCTATATAAGCATCCCCGTGGTGGCTCTCATAAATCCGCCCTTCGGATTCTTGCTAAAAGATTTCTTTCCAGGGAGATACAGCAATCTAGCAATGGCCACGATAGACCGGAGTTCGGATCACCTCCATCGTTAGTCCGAAAGAAGCTACTTAACATACTTGGTGAGAGCGGAAAGATGTCTTCTTTCATTGACGATGTTTCAACCGTGAAGAGATATTCCTCCGAATCATCACATGCATTCCCTGTAACATCTGATGATGAAGCTCTTGCAAAGGCAAAAAAAGAGGCAATGAATGAAAGAGTTCACTTCGTTTGGACACAATTTTCTGAATTGAATTCTTACCATAAGAAGCAAGCAGATGATGAAGAAAGATTGAATGTAAAGCTTGCAGAGTTGTTGTCATTAGTTACTTGTGATACAAAATCTGTCAGCAAGAAAAGGAACAGCCCCAAGATCTGTGTCGAACAACGAGAAATTTTGGCTCGTATCGATTCAAGAATCGATAGCCTCTATGCCTCGCTACCTACGAATGCTATGCTTATTATTTGCACGGGTCACGGTGACATAGCACTTGTACAGAGATTGAGAAAAATGCTAGTGGAGAAAAGTGAAACAAGCATATGCCGTGACAAGGTTGTCAAGATCTTTGAAGAGCTCCATGCCCAAGCTGAGGTAGCTCTCTGTTTTGTATGTATAAAGCATTGA

Protein sequence

MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDRPEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCDTKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKMLVEKSETSICRDKVVKIFEELHAQAEVALCFVCIKH
Homology
BLAST of Cp4.1LG06g07840 vs. ExPASy Swiss-Prot
Match: Q8L7M4 (Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2)

HSP 1 Score: 602.1 bits (1551), Expect = 6.4e-171
Identity = 318/559 (56.89%), Postives = 406/559 (72.63%), Query Frame = 0

Query: 16  KSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSW 75
           KSN GN        SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMPSW
Sbjct: 23  KSNTGN--------SFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMPSW 82

Query: 76  VFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDA 135
           VFIKNKPLIPKVV++YLPGLDAALY+S SK L + K  CG+P  +LALSC+ D M+TID 
Sbjct: 83  VFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTIDT 142

Query: 136 LLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELED 195
           +LTCK ++K+   S      L S  E       S   ++L K++PFPV+YYTL+ KE+E 
Sbjct: 143 ILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKS--FVELTKDIPFPVSYYTLSQKEMEQ 202

Query: 196 NGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM--------------------IVLDKLVK 255
           NGY F +     TLPAP GS P E++ALDCEM                    ++LDKLV 
Sbjct: 203 NGYTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVM 262

Query: 256 PSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISH 315
           P+N I DYNTR+SGIT  M+  VTT+L+D+Q++FL LV KET+LVGHSLENDL++LKISH
Sbjct: 263 PTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISH 322

Query: 316 DLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR----------------- 375
           +LV+DTAVLYKHP G S+K+ LRILAK+FL+REIQ+S +GHD                  
Sbjct: 323 NLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKH 382

Query: 376 -PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHAFPVTSDDEALAKAKK 435
            P+FGSPP ++RKKLL +L ESGK +S ID+++ VKRY+SESS+A PV+SDDEAL+KA K
Sbjct: 383 GPDFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASESSNAIPVSSDDEALSKAVK 442

Query: 436 EAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCDTKSVSKKRNSPKICV 495
           E  N+R  FVWTQFSELN++ + +ADD ++LN +LAE++SL+TC+ KS  KK N   +  
Sbjct: 443 EVKNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISLLTCNKKSGLKKSN---VSP 502

Query: 496 EQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKMLVEKSETSICRDKVVK 537
           E +EIL +++ R+ SLYA+LPTNAM I+CTGHGD ++V R+RKML ++ E    R+K+VK
Sbjct: 503 ETKEILKKMNERVQSLYAALPTNAMFIVCTGHGDTSIVHRVRKMLKDEDEIGFDREKLVK 562

BLAST of Cp4.1LG06g07840 vs. ExPASy Swiss-Prot
Match: O94443 (Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC637.09 PE=3 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 1.8e-32
Identity = 144/551 (26.13%), Postives = 237/551 (43.01%), Query Frame = 0

Query: 46  KTPESN--STLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ 105
           +T E+N    L + D+Q LV W LA+G  PSWV ++NK +I + V++ +PGL+ + +  Q
Sbjct: 90  QTTENNLQKPLKISDLQELVFWCLADGQAPSWVLVRNKQMIHRAVILLVPGLEPSQFGFQ 149

Query: 106 -------SKILP----------------TFKRFCGSPRPVLALSCISDRMQTIDALLTCK 165
                  S +LP                 F R   +  P       S     + + L+ +
Sbjct: 150 PVRGNKHSFLLPNLLNENGPIQLPDFCEVFDRAWPTRSPGDRFRVFSPVNAFLQSPLSNE 209

Query: 166 VKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPF 225
            K+KRD        K T     F    D  +S +   E  +P+    +  +E+       
Sbjct: 210 QKKKRD--------KETRAMASFSKPSDYLMSYESFIEDEYPLHPTVMKGEEV------- 269

Query: 226 NQPGFIQTLPAPMGSSPY--EMLALDCEM--------------------IVLDKLVKPSN 285
            QP           S P   ++LA+DCEM                    ++ D+ VKP +
Sbjct: 270 TQPSGWVASAGDFHSPPINPKILAIDCEMVRTENGLEIARVTIVDMKSEVIYDEFVKPES 329

Query: 286 AIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLV 345
            + DY T++SGIT E L  VTT L DVQ      V   TVL+GHSL +DL  LK +H  +
Sbjct: 330 PVTDYVTQYSGITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHI 389

Query: 346 VDTAVLYKHPRGGSHKSALRILAKRFLSREIQQS-SNGHDRPEFGSPPSLVRKKLLNILG 405
           +DTA +Y H RG   K +L+ LA ++L REIQ++ + GHD  E     +L    LL +  
Sbjct: 390 IDTANIYNHTRGPPSKPSLKWLATKWLRREIQKAGALGHDSAE----DALACVDLLKLKV 449

Query: 406 ESGKMSSFIDD-----------------VSTVKRYSSESS-------HAFPVTSDDEALA 465
           ++G      +                  +  +  Y +  S        +    +DDE ++
Sbjct: 450 KNGPAFGLFNQDFESIFHRLSRQQPTPLIGAIADYGNPESCIGKAAHKSVSCANDDEVVS 509

Query: 466 KAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCDTKSVSKKRNSP 522
                ++++  +FVW +F EL       A+   +         +    DT++ S + +  
Sbjct: 510 AV--VSLSDMHNFVWGRFRELEHAAMWNANRNTKQE-------NNSDTDTENDSVEEDQ- 569

BLAST of Cp4.1LG06g07840 vs. ExPASy Swiss-Prot
Match: P53331 (RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RNH70 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.1e-26
Identity = 121/491 (24.64%), Postives = 207/491 (42.16%), Query Frame = 0

Query: 54  LSLQDVQGLVTWVL-AEGFMPSWVFIKNKPLIPKVVMVYLPGL----------------D 113
           + ++DV+ +  ++L AE   P W+ I N+  + K++++++PGL                D
Sbjct: 65  IGIKDVRDMTQYLLQAENNSPKWIDICNRSSLQKMIVLFIPGLQPDDFENGKNTFNEISD 124

Query: 114 AALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKL 173
                   +I  TF  F     PV+A           ++ +   + +    N +      
Sbjct: 125 DNFKYIPGEIASTFHTF-----PVMAPGSKMTLFSPYNSFINVGLSKMEKINKLK----- 184

Query: 174 TSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFN------QPGFIQTLP 233
                            +L K+    +    L+ ++L  N YP +         ++QT+ 
Sbjct: 185 -----------------ELQKKKKITINDLVLSEQQLVANDYPLDSGDTNFDTDWVQTVD 244

Query: 234 APMGSSPYEMLALDCEM--------------------IVLDKLVKPSNAIVDYNTRFSGI 293
              G S   + ALDCEM                    ++ ++LVKP   IVDY TR+SGI
Sbjct: 245 FTHGGS--HIFALDCEMCLSEQGLVLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGI 304

Query: 294 TCEMLN-EVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPR 353
           T E L      +L +VQKD L ++ +  +L+GHSL+NDL  +K+ H LVVDTA++Y H  
Sbjct: 305 TEEKLTVGAKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKA 364

Query: 354 GGSHKSALRILAKRFLSREIQQSSNGHDRPEFG-SPPSLVRKKLLNILGESGKMSSFIDD 413
           G   K +L+ L++ FL++ IQ     HD  E   +   L + K+LN L       +F   
Sbjct: 365 GDPFKPSLKYLSETFLNKSIQNGE--HDSVEDARACLELTKLKILNGL-------AFGIG 424

Query: 414 VSTVKRYSSESSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDE--E 473
           ++T   ++    H F V          K   +N+ +    T+        +   DDE   
Sbjct: 425 INTENLFT--KLHRFEV----------KTVLLNDMIIKNHTEDDSKGQLIRCVEDDETWT 484

Query: 474 RLNVKLAELLSLVTCDTKSVSKKRNSPK------ICVEQREILARIDSRIDSLYASLPTN 492
            ++  L + + L+    K++ + RN  K         +   +L  I   +  LY +    
Sbjct: 485 HIHENLNKDVKLIVGRIKNLERSRNYNKKPRKETPSFDASMVLHDIGQHLTQLYENATPG 505

BLAST of Cp4.1LG06g07840 vs. ExPASy Swiss-Prot
Match: Q8IX06 (Putative exonuclease GOR OS=Homo sapiens OX=9606 GN=REXO1L1P PE=5 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-24
Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 0

Query: 190 AKELEDNGYPFNQPGFIQTLPAPMGSSPYE-MLALDCEM--------------------I 249
           AK+   +G   +  GF++T    +    Y  + ALDCEM                    +
Sbjct: 470 AKQHVRDGRKESLDGFVETFKKELSRDAYPGIYALDCEMCYTTHGLELTRVTVVDADMRV 529

Query: 250 VLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDL 309
           V D  VKP N IVDYNTRFSG+T   + + + +L  VQ   L+    +T+L+GHSLE+DL
Sbjct: 530 VYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDL 589

Query: 310 MALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDRPEFGS 344
           +ALK+ H  VVDTAVL+ H  G  +K +LR LA  +L++ IQ S +GH+  E  S
Sbjct: 590 LALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDSQDGHNSSEDAS 644

BLAST of Cp4.1LG06g07840 vs. ExPASy Swiss-Prot
Match: Q7TT28 (RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.1e-24
Identity = 67/175 (38.29%), Postives = 96/175 (54.86%), Query Frame = 0

Query: 190  AKELEDNGYPFNQPGFIQTLPAPMGSSPYE-MLALDCEM--------------------I 249
            AK+   +G   N  GF++T    +    +  + ALDCEM                    +
Sbjct: 1021 AKQHVQDGRKENLEGFVRTFQKELPEDAHAGVFALDCEMSYTTYGLELTRVTVVDTDMQV 1080

Query: 250  VLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDL 309
            V D  VKP N +VDYNTRFSG+T   L + + +L DVQ   L++   +T+L+GHSLE+DL
Sbjct: 1081 VYDTFVKPDNEVVDYNTRFSGVTEADLVDTSITLRDVQAVLLSMFSADTILIGHSLESDL 1140

Query: 310  MALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDRPEFGS 344
            +ALK+ H  VVDT+VL+ H  G  +K +LR L   +L + IQ + +GH   E  S
Sbjct: 1141 LALKVIHGTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAS 1195

BLAST of Cp4.1LG06g07840 vs. NCBI nr
Match: XP_023534811.1 (small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1028 bits (2657), Expect = 0.0
Identity = 536/575 (93.22%), Postives = 536/575 (93.22%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
           GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM             
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHD   
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDSVE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA
Sbjct: 361 DARATMELALLKIKHGPEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD
Sbjct: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML
Sbjct: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. NCBI nr
Match: XP_022937364.1 (small RNA degrading nuclease 5-like [Cucurbita moschata])

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 528/575 (91.83%), Postives = 532/575 (92.52%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
           GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM             
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH+   
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNSVE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           PEFGSPPSLVRKKLLNILGESGK SSFIDDVSTVKRYSSESSHA
Sbjct: 361 DARATMELALLKIKHGPEFGSPPSLVRKKLLNILGESGKTSSFIDDVSTVKRYSSESSHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADD+ERLNVKLAELLSLVTCD
Sbjct: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDDERLNVKLAELLSLVTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TKSVSKKRNSPKICVE REILA IDSRIDSLYASLPTNAMLI+CTGHGDIALVQRLRKML
Sbjct: 481 TKSVSKKRNSPKICVELREILAHIDSRIDSLYASLPTNAMLIMCTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. NCBI nr
Match: KAG6592160.1 (Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 998 bits (2579), Expect = 0.0
Identity = 522/576 (90.62%), Postives = 531/576 (92.19%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVSALDAKEEGKSNVGNTE+EE+KPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 28  MPSSSVSALDAKEEGKSNVGNTEKEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 87

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
           GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMS SKILPTFKRFCGSPRPV
Sbjct: 88  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSLSKILPTFKRFCGSPRPV 147

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKD+PISIKLPKE+P
Sbjct: 148 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDTPISIKLPKEIP 207

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM             
Sbjct: 208 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 267

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV
Sbjct: 268 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 327

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSS GHD   
Sbjct: 328 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSIGHDSVE 387

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           PEFGSPPSLVRKKLLNILGESGK SSFIDDVSTVKRYSSESSHA
Sbjct: 388 DARATMELAVLKIKHGPEFGSPPSLVRKKLLNILGESGKTSSFIDDVSTVKRYSSESSHA 447

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADD+ERLNVKLAELLSLVTCD
Sbjct: 448 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDDERLNVKLAELLSLVTCD 507

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TKSVSKKRNSPKICVE REILARI+SRIDSLYASLPTNAMLI+CTGHGDIALVQRLRKML
Sbjct: 508 TKSVSKKRNSPKICVELREILARINSRIDSLYASLPTNAMLIMCTGHGDIALVQRLRKML 567

BLAST of Cp4.1LG06g07840 vs. NCBI nr
Match: XP_022974960.1 (small RNA degrading nuclease 5-like [Cucurbita maxima])

HSP 1 Score: 994 bits (2569), Expect = 0.0
Identity = 523/579 (90.33%), Postives = 528/579 (91.19%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEED----KPSFFDIYGTDAKAEVLFKTPESNSTLSL 60
           MPSSSVSALDAKEEGKSNVGNTEEEE+    KPSFFDIYGTDAKAEVLFKTPESNSTLSL
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 60

Query: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120
           QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS
Sbjct: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120

Query: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLP 180
           PRPVLALSCISDRMQTIDALLTCKVKRKRDANSV LKNK+TSEQEIFGPEKDSPISIKLP
Sbjct: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVGLKNKMTSEQEIFGPEKDSPISIKLP 180

Query: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM--------- 240
           KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM         
Sbjct: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFEL 240

Query: 241 -----------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKE 300
                      IVLDKLVKPSNAIV+YNTRFSGITCEMLNEVTTSLEDVQKD LNLVHKE
Sbjct: 241 TRITLVDMAGQIVLDKLVKPSNAIVNYNTRFSGITCEMLNEVTTSLEDVQKDLLNLVHKE 300

Query: 301 TVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360
           TVLVGHSLENDLMALKISHD VVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH
Sbjct: 301 TVLVGHSLENDLMALKISHDRVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360

Query: 361 DR------------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSE 420
           D                   PEFGSPPSLVRKKLLNILGESGK SSFIDDVSTVKRYSSE
Sbjct: 361 DSVEDARATMELALLKIKHGPEFGSPPSLVRKKLLNILGESGKTSSFIDDVSTVKRYSSE 420

Query: 421 SSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSL 480
           SSHAFPV SDDEALAKAKKEAMN+RVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSL
Sbjct: 421 SSHAFPVISDDEALAKAKKEAMNQRVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSL 480

Query: 481 VTCDTKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRL 537
           VTCDTKSVSKKRNSPKICVE REILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRL
Sbjct: 481 VTCDTKSVSKKRNSPKICVELREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRL 540

BLAST of Cp4.1LG06g07840 vs. NCBI nr
Match: XP_038886453.1 (small RNA degrading nuclease 5 [Benincasa hispida])

HSP 1 Score: 933 bits (2412), Expect = 0.0
Identity = 483/575 (84.00%), Postives = 511/575 (88.87%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVSALD  +EGKSN G T+E   K SFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDCVDEGKSNAGKTQE---KSSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
           GLVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPR V
Sbjct: 61  GLVTWVLAEGFMPQWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRAV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRD NSVD+KNKLTSE EI G EK++PISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDENSVDIKNKLTSEPEISGLEKEAPISIKLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FP+TYYTLTAK LEDNGYPFNQPGFIQTLPAP+GSSP EMLALDCEM             
Sbjct: 181 FPITYYTLTAKALEDNGYPFNQPGFIQTLPAPVGSSPNEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  +VLDKLVKPSNAIVDYNTRFSGITCEML+EVTTSL+DVQ+DFLNLVHKETVLV
Sbjct: 241 LVDIEGRVVLDKLVKPSNAIVDYNTRFSGITCEMLSEVTTSLKDVQRDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLS+EIQQS NGHD   
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSKEIQQSGNGHDSIE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           P+FGSPPSL+RKKLLNILGESGK SSFID++STVKRYSSES+HA
Sbjct: 361 DARATMELALLKIKHGPDFGSPPSLIRKKLLNILGESGKTSSFIDNISTVKRYSSESTHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEAL++AKKEAMNERVHF+WTQFSELNSYHKKQADDEERLNVKLAELLSL+TCD
Sbjct: 421 FPVTSDDEALSRAKKEAMNERVHFIWTQFSELNSYHKKQADDEERLNVKLAELLSLLTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TK+V+KKRNSPKI  E REILAR+DSRI+ LY SLPTNAMLIICTGHGDIALVQRLRKML
Sbjct: 481 TKTVNKKRNSPKISAELREILARMDSRINDLYTSLPTNAMLIICTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. ExPASy TrEMBL
Match: A0A6J1FAZ1 (small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC111443672 PE=4 SV=1)

HSP 1 Score: 1013 bits (2618), Expect = 0.0
Identity = 528/575 (91.83%), Postives = 532/575 (92.52%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
           GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM             
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV
Sbjct: 241 LVDMAGQIVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH+   
Sbjct: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHNSVE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           PEFGSPPSLVRKKLLNILGESGK SSFIDDVSTVKRYSSESSHA
Sbjct: 361 DARATMELALLKIKHGPEFGSPPSLVRKKLLNILGESGKTSSFIDDVSTVKRYSSESSHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADD+ERLNVKLAELLSLVTCD
Sbjct: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDDERLNVKLAELLSLVTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TKSVSKKRNSPKICVE REILA IDSRIDSLYASLPTNAMLI+CTGHGDIALVQRLRKML
Sbjct: 481 TKSVSKKRNSPKICVELREILAHIDSRIDSLYASLPTNAMLIMCTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. ExPASy TrEMBL
Match: A0A6J1IFC2 (small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111473789 PE=4 SV=1)

HSP 1 Score: 994 bits (2569), Expect = 0.0
Identity = 523/579 (90.33%), Postives = 528/579 (91.19%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEED----KPSFFDIYGTDAKAEVLFKTPESNSTLSL 60
           MPSSSVSALDAKEEGKSNVGNTEEEE+    KPSFFDIYGTDAKAEVLFKTPESNSTLSL
Sbjct: 1   MPSSSVSALDAKEEGKSNVGNTEEEEEEEEEKPSFFDIYGTDAKAEVLFKTPESNSTLSL 60

Query: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120
           QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS
Sbjct: 61  QDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGS 120

Query: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLP 180
           PRPVLALSCISDRMQTIDALLTCKVKRKRDANSV LKNK+TSEQEIFGPEKDSPISIKLP
Sbjct: 121 PRPVLALSCISDRMQTIDALLTCKVKRKRDANSVGLKNKMTSEQEIFGPEKDSPISIKLP 180

Query: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM--------- 240
           KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM         
Sbjct: 181 KELPFPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEMCVTCEGFEL 240

Query: 241 -----------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKE 300
                      IVLDKLVKPSNAIV+YNTRFSGITCEMLNEVTTSLEDVQKD LNLVHKE
Sbjct: 241 TRITLVDMAGQIVLDKLVKPSNAIVNYNTRFSGITCEMLNEVTTSLEDVQKDLLNLVHKE 300

Query: 301 TVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360
           TVLVGHSLENDLMALKISHD VVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH
Sbjct: 301 TVLVGHSLENDLMALKISHDRVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGH 360

Query: 361 DR------------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSE 420
           D                   PEFGSPPSLVRKKLLNILGESGK SSFIDDVSTVKRYSSE
Sbjct: 361 DSVEDARATMELALLKIKHGPEFGSPPSLVRKKLLNILGESGKTSSFIDDVSTVKRYSSE 420

Query: 421 SSHAFPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSL 480
           SSHAFPV SDDEALAKAKKEAMN+RVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSL
Sbjct: 421 SSHAFPVISDDEALAKAKKEAMNQRVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSL 480

Query: 481 VTCDTKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRL 537
           VTCDTKSVSKKRNSPKICVE REILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRL
Sbjct: 481 VTCDTKSVSKKRNSPKICVELREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRL 540

BLAST of Cp4.1LG06g07840 vs. ExPASy TrEMBL
Match: A0A6J1J229 (small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111480556 PE=4 SV=1)

HSP 1 Score: 915 bits (2365), Expect = 0.0
Identity = 473/575 (82.26%), Postives = 505/575 (87.83%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSS VSALD++EEG+SNVG T+E    PSFFDIYGTDAKAE+LFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSGVSALDSEEEGRSNVGKTKE---NPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
           GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQ+KILPTFK+ CG+PR V
Sbjct: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDANSVDLKN LTSEQE FGPEK++PISIKLPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERFGPEKETPISIKLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAKELEDNGYPFNQPGFI TLPAP+GSSPYEMLALDCEM             
Sbjct: 181 FPVTYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  +VLDKLVKPSNAIVDYNTRFSGIT EML++VTTSLEDVQK FLNLVHKETVL+
Sbjct: 241 LVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLSQVTTSLEDVQKVFLNLVHKETVLI 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDLMALKISHDLV+DTAVLYKHPRGGSHKSALRIL K+FLSREIQQS NGHD   
Sbjct: 301 GHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           PEFGSPPSL+RKKLL ILGE+GK SSFIDDVSTVKRYSSESSHA
Sbjct: 361 DARATMELALLKIKHGPEFGSPPSLIRKKLLTILGENGKTSSFIDDVSTVKRYSSESSHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEAL++AKKE MNERVHF+WTQFSELNSYHKKQ DDEERLNVKLAELLSL+TCD
Sbjct: 421 FPVTSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           +KSV+KKRNS KI VE REIL+R+DSRI  LY SLPTNAMLI+CTGHGDIALVQRLRKML
Sbjct: 481 SKSVNKKRNSRKISVELREILSRMDSRIKDLYTSLPTNAMLIVCTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. ExPASy TrEMBL
Match: A0A5D3DMF7 (Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00380 PE=4 SV=1)

HSP 1 Score: 914 bits (2362), Expect = 0.0
Identity = 473/575 (82.26%), Postives = 504/575 (87.65%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVS LD+++EGKSNVG T+E   KP FFDIYG DAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQE---KPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
            LVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPR V
Sbjct: 61  QLVTWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDAN VDL NKLTSE EI G EK++PISI+LPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAK+LEDNGYPFNQPGFIQTLPAP G SP EMLALDCEM             
Sbjct: 181 FPVTYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  ++LDKLVKPSNAIVDYNTRFSGITCEML+ VTTSLEDVQ+DFLNLVHKETVLV
Sbjct: 241 LVDMEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDL+ALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQS NGHD   
Sbjct: 301 GHSLENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           P+FGSPPSL+RKKLLNILGE GK SSFIDD+STVKRYSSESSHA
Sbjct: 361 DARATMELALLKIKHGPDFGSPPSLIRKKLLNILGECGKTSSFIDDISTVKRYSSESSHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEAL++AKKEAMNE+VHF+WTQFSELNSYHKKQ DDEE+LNVKLAELLSL+TCD
Sbjct: 421 FPVTSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TKSV+KKRN  KI VE +EILAR+DSRI+ LY SLPTNAMLIICTGHGDIALVQRLRKML
Sbjct: 481 TKSVNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. ExPASy TrEMBL
Match: A0A1S3CT45 (small RNA degrading nuclease 5 OS=Cucumis melo OX=3656 GN=LOC103504042 PE=4 SV=1)

HSP 1 Score: 914 bits (2362), Expect = 0.0
Identity = 473/575 (82.26%), Postives = 504/575 (87.65%), Query Frame = 0

Query: 1   MPSSSVSALDAKEEGKSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQ 60
           MPSSSVS LD+++EGKSNVG T+E   KP FFDIYG DAKAEVLFKTPESNSTLSLQDVQ
Sbjct: 1   MPSSSVSGLDSEDEGKSNVGKTQE---KPCFFDIYGADAKAEVLFKTPESNSTLSLQDVQ 60

Query: 61  GLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPV 120
            LVTWVLAEGFMP WVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFK+FCGSPR V
Sbjct: 61  QLVTWVLAEGFMPRWVFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKKFCGSPRAV 120

Query: 121 LALSCISDRMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELP 180
           LALSCISDRMQTIDALLTCKVKRKRDAN VDL NKLTSE EI G EK++PISI+LPKELP
Sbjct: 121 LALSCISDRMQTIDALLTCKVKRKRDANKVDLNNKLTSEPEISGLEKEAPISIQLPKELP 180

Query: 181 FPVTYYTLTAKELEDNGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM------------- 240
           FPVTYYTLTAK+LEDNGYPFNQPGFIQTLPAP G SP EMLALDCEM             
Sbjct: 181 FPVTYYTLTAKQLEDNGYPFNQPGFIQTLPAPEGCSPNEMLALDCEMCVTCEGFELTRIT 240

Query: 241 -------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLV 300
                  ++LDKLVKPSNAIVDYNTRFSGITCEML+ VTTSLEDVQ+DFLNLVHKETVLV
Sbjct: 241 LVDMEGQVLLDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLEDVQRDFLNLVHKETVLV 300

Query: 301 GHSLENDLMALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR-- 360
           GHSLENDL+ALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQS NGHD   
Sbjct: 301 GHSLENDLIALKISHDLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSGNGHDSIE 360

Query: 361 ----------------PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHA 420
                           P+FGSPPSL+RKKLLNILGE GK SSFIDD+STVKRYSSESSHA
Sbjct: 361 DARATMELALLKIKHGPDFGSPPSLIRKKLLNILGECGKTSSFIDDISTVKRYSSESSHA 420

Query: 421 FPVTSDDEALAKAKKEAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCD 480
           FPVTSDDEAL++AKKEAMNE+VHF+WTQFSELNSYHKKQ DDEE+LNVKLAELLSL+TCD
Sbjct: 421 FPVTSDDEALSRAKKEAMNEKVHFIWTQFSELNSYHKKQVDDEEKLNVKLAELLSLLTCD 480

Query: 481 TKSVSKKRNSPKICVEQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKML 537
           TKSV+KKRN  KI VE +EILAR+DSRI+ LY SLPTNAMLIICTGHGDIALVQRLRKML
Sbjct: 481 TKSVNKKRNRAKISVELQEILARMDSRINDLYTSLPTNAMLIICTGHGDIALVQRLRKML 540

BLAST of Cp4.1LG06g07840 vs. TAIR 10
Match: AT5G25800.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 602.1 bits (1551), Expect = 4.5e-172
Identity = 318/559 (56.89%), Postives = 406/559 (72.63%), Query Frame = 0

Query: 16  KSNVGNTEEEEDKPSFFDIYGTDAKAEVLFKTPESNSTLSLQDVQGLVTWVLAEGFMPSW 75
           KSN GN        SFFDIYG +AKAE+ FK+PE  +TL+LQDVQGLVTWVLAEGFMPSW
Sbjct: 23  KSNTGN--------SFFDIYGPEAKAELDFKSPE--TTLNLQDVQGLVTWVLAEGFMPSW 82

Query: 76  VFIKNKPLIPKVVMVYLPGLDAALYMSQSKILPTFKRFCGSPRPVLALSCISDRMQTIDA 135
           VFIKNKPLIPKVV++YLPGLDAALY+S SK L + K  CG+P  +LALSC+ D M+TID 
Sbjct: 83  VFIKNKPLIPKVVLLYLPGLDAALYLSHSKTLSSLKSCCGNPMALLALSCVVDEMRTIDT 142

Query: 136 LLTCKVKRKRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELED 195
           +LTCK ++K+   S      L S  E       S   ++L K++PFPV+YYTL+ KE+E 
Sbjct: 143 ILTCKGRKKKTVTSSVEPPPLVSSPEACNLMGKS--FVELTKDIPFPVSYYTLSQKEMEQ 202

Query: 196 NGYPFNQPGFIQTLPAPMGSSPYEMLALDCEM--------------------IVLDKLVK 255
           NGY F +     TLPAP GS P E++ALDCEM                    ++LDKLV 
Sbjct: 203 NGYTFEKLELTPTLPAPSGSCPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVM 262

Query: 256 PSNAIVDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISH 315
           P+N I DYNTR+SGIT  M+  VTT+L+D+Q++FL LV KET+LVGHSLENDL++LKISH
Sbjct: 263 PTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISH 322

Query: 316 DLVVDTAVLYKHPRGGSHKSALRILAKRFLSREIQQSSNGHDR----------------- 375
           +LV+DTAVLYKHP G S+K+ LRILAK+FL+REIQ+S +GHD                  
Sbjct: 323 NLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDLALLKIKH 382

Query: 376 -PEFGSPPSLVRKKLLNILGESGKMSSFIDDVSTVKRYSSESSHAFPVTSDDEALAKAKK 435
            P+FGSPP ++RKKLL +L ESGK +S ID+++ VKRY+SESS+A PV+SDDEAL+KA K
Sbjct: 383 GPDFGSPPEVIRKKLLAVLNESGKTTSIIDNINIVKRYASESSNAIPVSSDDEALSKAVK 442

Query: 436 EAMNERVHFVWTQFSELNSYHKKQADDEERLNVKLAELLSLVTCDTKSVSKKRNSPKICV 495
           E  N+R  FVWTQFSELN++ + +ADD ++LN +LAE++SL+TC+ KS  KK N   +  
Sbjct: 443 EVKNKRSQFVWTQFSELNAHFQSRADDPQKLNSRLAEMISLLTCNKKSGLKKSN---VSP 502

Query: 496 EQREILARIDSRIDSLYASLPTNAMLIICTGHGDIALVQRLRKMLVEKSETSICRDKVVK 537
           E +EIL +++ R+ SLYA+LPTNAM I+CTGHGD ++V R+RKML ++ E    R+K+VK
Sbjct: 503 ETKEILKKMNERVQSLYAALPTNAMFIVCTGHGDTSIVHRVRKMLKDEDEIGFDREKLVK 562

BLAST of Cp4.1LG06g07840 vs. TAIR 10
Match: AT5G05540.1 (small RNA degrading nuclease 2 )

HSP 1 Score: 92.8 bits (229), Expect = 8.9e-19
Identity = 75/263 (28.52%), Postives = 122/263 (46.39%), Query Frame = 0

Query: 109 TFKRFCGSPRPVLALSCISD----RMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFG 168
           T+K F       L  S +SD    R   + A LT  +K+K D     L   L  + ++F 
Sbjct: 31  TWKEFLDFYDKQLGSSSLSDPSKRRKDDLVAFLT-TLKKKEDLQL--LAKSLKLDNDVFE 90

Query: 169 PEKDSPISIKLPKELPFPVTYYTLTAKELE-DNGYPFNQPGFIQT--LPAPMGSSPYEML 228
             K   +     + L       TLT  E   D  +P N   +++T      M  +  EM+
Sbjct: 91  KFKKKSLDETAEQRL----VRMTLTHDEYPLDYLFPSNAEDWVRTGLGKKKMEPTKIEMI 150

Query: 229 ALDCEM---------------------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTT 288
           A+DCEM                     ++LD+ VKP+  +VDY T  +G+T + L + T 
Sbjct: 151 AIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATI 210

Query: 289 SLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSH------K 338
           S+ D+Q+  L  + ++T+LVG SL +DL  LK+ H  V+DT++++K+   G+       +
Sbjct: 211 SVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKR 270

BLAST of Cp4.1LG06g07840 vs. TAIR 10
Match: AT5G05540.2 (small RNA degrading nuclease 2 )

HSP 1 Score: 92.8 bits (229), Expect = 8.9e-19
Identity = 75/263 (28.52%), Postives = 122/263 (46.39%), Query Frame = 0

Query: 109 TFKRFCGSPRPVLALSCISD----RMQTIDALLTCKVKRKRDANSVDLKNKLTSEQEIFG 168
           T+K F       L  S +SD    R   + A LT  +K+K D     L   L  + ++F 
Sbjct: 31  TWKEFLDFYDKQLGSSSLSDPSKRRKDDLVAFLT-TLKKKEDLQL--LAKSLKLDNDVFE 90

Query: 169 PEKDSPISIKLPKELPFPVTYYTLTAKELE-DNGYPFNQPGFIQT--LPAPMGSSPYEML 228
             K   +     + L       TLT  E   D  +P N   +++T      M  +  EM+
Sbjct: 91  KFKKKSLDETAEQRL----VRMTLTHDEYPLDYLFPSNAEDWVRTGLGKKKMEPTKIEMI 150

Query: 229 ALDCEM---------------------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEVTT 288
           A+DCEM                     ++LD+ VKP+  +VDY T  +G+T + L + T 
Sbjct: 151 AIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATI 210

Query: 289 SLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKHPRGGSH------K 338
           S+ D+Q+  L  + ++T+LVG SL +DL  LK+ H  V+DT++++K+   G+       +
Sbjct: 211 SVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKR 270

BLAST of Cp4.1LG06g07840 vs. TAIR 10
Match: AT3G50100.1 (small RNA degrading nuclease 1 )

HSP 1 Score: 87.8 bits (216), Expect = 2.9e-17
Identity = 62/218 (28.44%), Postives = 104/218 (47.71%), Query Frame = 0

Query: 144 KRDANSVDLKNKLTSEQEIFGPEKDSPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQP 203
           K  AN + ++N     Q+   PE+   + ++L  E P         +  L+ +  P+++ 
Sbjct: 74  KCHANHLLIENLKQESQDEDTPEQ---MLVRLTVEHP---------SYSLDYSFKPYSED 133

Query: 204 GFIQTLPAPMGS--SPYEMLALDCEM---------------------IVLDKLVKPSNAI 263
            F+  +   M        M+A+DCEM                     ++LD+ VKP+  +
Sbjct: 134 WFVSDVGMKMKKVMESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPV 193

Query: 264 VDYNTRFSGITCEMLNEVTTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVD 323
           VDY T  +GIT E +   + S+ D+Q+     +   T+LVGHSL  DL  LKI H  V+D
Sbjct: 194 VDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVID 253

Query: 324 TAVLYKHPRGGS-HKSALRILAKRFLSREIQQSSNGHD 338
           TA+++K+P      + +L  L K  L  E++++   HD
Sbjct: 254 TALVFKYPNTRKLRRPSLNNLCKSILGYEVRKTGVPHD 279

BLAST of Cp4.1LG06g07840 vs. TAIR 10
Match: AT5G67240.1 (small RNA degrading nuclease 3 )

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-16
Identity = 46/140 (32.86%), Postives = 70/140 (50.00%), Query Frame = 0

Query: 220 MLALDCEM---------------------IVLDKLVKPSNAIVDYNTRFSGITCEMLNEV 279
           ML++DCEM                     +VLDK VKP   ++DY T  +G+T E L   
Sbjct: 145 MLSIDCEMVTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDLERA 204

Query: 280 TTSLEDVQKDFLNLVHKETVLVGHSLENDLMALKISHDLVVDTAVLYKH-PRGGSHKSAL 338
           T S+ D+QK     +   T+LVGH L NDL  L+I H  V+DT+ +++      + + +L
Sbjct: 205 TLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEFVDAPKTQRPSL 264

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L7M46.4e-17156.89Small RNA degrading nuclease 5 OS=Arabidopsis thaliana OX=3702 GN=SDN5 PE=2 SV=2[more]
O944431.8e-3226.13Uncharacterized exonuclease C637.09 OS=Schizosaccharomyces pombe (strain 972 / A... [more]
P533311.1e-2624.64RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55... [more]
Q8IX061.1e-2439.43Putative exonuclease GOR OS=Homo sapiens OX=9606 GN=REXO1L1P PE=5 SV=2[more]
Q7TT283.1e-2438.29RNA exonuclease 1 homolog OS=Mus musculus OX=10090 GN=Rexo1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_023534811.10.093.22small RNA degrading nuclease 5-like [Cucurbita pepo subsp. pepo][more]
XP_022937364.10.091.83small RNA degrading nuclease 5-like [Cucurbita moschata][more]
KAG6592160.10.090.63Small RNA degrading nuclease 5, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022974960.10.090.33small RNA degrading nuclease 5-like [Cucurbita maxima][more]
XP_038886453.10.084.00small RNA degrading nuclease 5 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1FAZ10.091.83small RNA degrading nuclease 5-like OS=Cucurbita moschata OX=3662 GN=LOC11144367... [more]
A0A6J1IFC20.090.33small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111473789 ... [more]
A0A6J1J2290.082.26small RNA degrading nuclease 5-like OS=Cucurbita maxima OX=3661 GN=LOC111480556 ... [more]
A0A5D3DMF70.082.26Small RNA degrading nuclease 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A1S3CT450.082.26small RNA degrading nuclease 5 OS=Cucumis melo OX=3656 GN=LOC103504042 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G25800.14.5e-17256.89Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT5G05540.18.9e-1928.52small RNA degrading nuclease 2 [more]
AT5G05540.28.9e-1928.52small RNA degrading nuclease 2 [more]
AT3G50100.12.9e-1728.44small RNA degrading nuclease 1 [more]
AT5G67240.14.1e-1632.86small RNA degrading nuclease 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 219..362
e-value: 1.6E-13
score: 60.9
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 230..283
e-value: 4.3E-5
score: 24.1
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 218..338
e-value: 1.1E-33
score: 118.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR12801:SF115LD29573Pcoord: 229..522
coord: 20..228
NoneNo IPR availablePANTHERPTHR12801RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDcoord: 20..228
NoneNo IPR availablePANTHERPTHR12801RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATEDcoord: 229..522
IPR034922RNA exonuclease 1-like, exonuclease domainCDDcd06145REX1_likecoord: 221..337
e-value: 2.86952E-64
score: 204.256
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 215..333

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g07840.1Cp4.1LG06g07840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding