Cp4.1LG06g07670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g07670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PsbP domain-containing protein
Location	Cp4.1LG06: 5912023 .. 5916728 (+)
RNA-Seq Expression	Cp4.1LG06g07670
Synteny	Cp4.1LG06g07670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGTTGAAGAAACCTAAAGCACAAGTTGTAATCCATATGGCGCCAAAGAGATGCAATTCCGCACCACATCCACACAAAAATCGAAGAACTAAATCCCTCTCGTCTTTGATCTCCCAATTTCCAGGCACTTCCATCTCCATCCCTTAATCATTCTGATTCTTCCATTTCTGCAATTCGTCTCCAGAAATCATCGTTTCTGGGTTCGAATGGGATCGACTATGTTCGCCTCTGTTCCATTCTCCTGCAACTTTCATCAATCAAAGCCTCCTTCCCACATCCTCCAAAAGGGTGTTCCGGGTGTCGGTGGCGAAAAGGAGAATCGGTCTCCCATTGTGAATCGGAGATCGGTTTTGCTATCCGGCGTTTCTCTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTCTTAACCTCTTGAACTCTGTATCTAAGTAATCCTTACTGTCGTTTTGTTTCTTGTTTACATCTATGATTTGTTTCTTTGTTTCAATTGGTGGAATCTTCTGGTTGCTGCAGATTGTGGATTGTGTAATACCTTTGTTCACTCTTTAAGTATATGAACTTTAATATCTAACCTTTTAGTTTCTATTCTTACAATTCTTTTTAAGTTGTAGAATTTTTTTGCATGTGTTGATGGATAAATCTTTAGGGAACAAATATGTTCTTAAATTAGAGAATAGATATTGAAAATGATGTATAATTTTCTATATTGATTTTGGTGATGTACTTAGTTAATTCCATCCTGTTAGTTTTTGGAGTTTCTAATCCCACTTAGAGAAGGGAACGACATCGATTGGAGAGGAGAACGAGTGCCAGTGAGGACGTTGGGTGTCACAATCGCGGTTTCTAGGCAGCGGATTTAGCGATTCTATGGCACCCACTCTCAGCACTGATTGGGTTAAGCCTACTTTGAATACAAACCTCAGTCTCGATTTCAAGAGAAGATTTTAGAAAGCAAGGGAGAGAGGTTTTAGAAAAAGAGTTTTGAAAGTAAGAGAGAGAGATTGGTGTTATATGGGAACGTAAGCAAAAAGGCAACAACAACGGCTTACTGCATATAACTTATCGGGTAGGGAGAAGTTGACAACTAGTCGTATCCCCCTATAGTACATTTTGAGGCATTTCATGTCTACTAGGCGTAGCCATGACATCTCTGAAACGTCATATTGGTAAAGAAAATAAGAAAGAAATAATACAACATGAAAGCGGTAAAAGAAAGCAATAAAGTAGTACAAGGCAAAGGTTTCGGCGTGTCACGAGCATGCAGCCATGGGCGACATGACTTGGACAAGCATGACCGTGACACTGGGCCTCGAAGGGAGGTGGATTGTCAGATCCCACATCGGCTGGGGAGGAGAACGAAACATTTTTAATAAAGGTGTGGAAACCTCTCCCTAGCATACACATTTTGACAACCTTGAGGTGAAGTTCGAAAGGGGACAGCCCAAAGAGGACAATATTTGCTAGCGGTGGGCTTGAGATGTTACAAAATGATATCAGAGCCAGACACCGCGGGGAGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACACGTTTTGATGACCTTGAGGGAAAGTACGAAAGGGGAAAGCCTAAAGAGGATAATATCTGCTAGCGGTGGGCTTGTGCTGTTACAAAATGGTATAAGAACCAAACACCGGGTAGTGTGCCAGCGAGGACGTTCGGCCTCGAAGGAGGGTGGATTGTGAGATCCTACATCATTAGAGAAGGGAACGACTGGAGAGGGGAACGAGTGCCAGTGAGCACGCTGGCCCTGAAGGGGGGTGGATTGTCAGATCTGCTGCCAGCGGTGGGCTTGGGCGGCTAGCGGTGAGATCCACTGCATCAAAAGAAGCAAACAGGGCTGATCATGCCATGTTTTCTATATCAAGTTTACATAGCATCTGTTGTGCTTGTGCAGGAATCTCTTGTATTAATCAGAATATATGCAGCAAATTTCATTTTTGACCATTGAAAGCTTTTAAACTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTAACTGCTGTTAGATGTCTTAGCCGGCGTTCTCCCTTAATTGCTTTAGTTCGTCCTTTGAGGTTGTTCCAATTATTGTCCAACGTTTCTGGGTCCGTTGTCTTTTGGTATTTGCATTGGGGTGCGTCAAGTTTCCAGTTTCCTGTTGATTAGAGGAGTAAGCACAATGTATCATGTAATGCCCTAAGCCCACCGCCAGCGGATATTGTCCTCTTTGGGCTTTTCCTTTCAAGCTTCCCCTTAAGGTTTTCAAAATGTGTCTGTCAGGGAGAGATTTACACACCTTTATAAATAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCTCCCTTCGGGGCCCAGCATCCTCACTGGCACTCCTTCCTTTCTCCAATCGATGTGGGACCCCCCAATCCACTCCGTTTCAGGTCCAACGCCCTTGTTGGCACATTGCCTCGTGTCCACCCCCTTTGAGGTTCAGCCTCCTCGCTGGCATATCGCCTGGTGTCTAGCTCTAATACCATTTGTAACACCACTAGCACAATGTATCATGTAATGCCCTAAGCCCACCGCCAGCGGATATTGTCCTCTTTGGGCTTTTCCTTTCAAGCTTCCCCTTAAGGTTTTCAAAATGTGTCTGTCAGGGAGAGATTTACACACCTTTATAAATAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCTCCCTTCGGGGCCCAGCATCCTCACTGGCACTCCTTCCTTTCTCCAATCGATGTGGGACCCCCCAATCCACTCCGTTTCAGGTCCAACGCCCTTGTTGGCACATTGCCTCGTGTCCACCCCCTTTGAGGTTCAGCCTCCTCGCTGGCATATCGCCTGGTGTCTAGCTCTAATACCATTTGTAACACCACTAGCACAATGTATCATGTAATGCCCTAAGCCCACCGCCAGCGGATATTGTCCTCTTTGGGCTTTTCCTTTCAAGCTTCCCCTTAAGGTTTTCAAAATGTGTCTGTCAGGGAGAGATTTACACACCTTTATAAATAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCACCTCCCTTCGGGGCCCAGCATCCTCACTGGCACTCCTTCCTTTCTCCAATCGATGTGGGACCCCCCAATCCACTCCGTTTCAGGTCCAACGCCCTTGTTGGCACATTGCCTCGTGTCCACCCCCTTTGAGGTTCAGCCTCCTTGCTGGCATATCGCCTGGTGTCTAGCTCTAATACCATTTGTAACACCACTAGCAGATATTATCCTTTTTGGGCTTTCTCTTCCAGACTTTCCCTCAAGGTTTTTAAAACGCATTTGCTAGAGAGATGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCTTCACCAACCGAATGTGGGACCTACTTTAATCAGCATCGAATGATATTGATATGTATTCCCAATTTATTTCTTTGCTAGGAATGGAAAAGTCTCGTGCTAGTTAGATATGTCCATGCAAGTTAACTTCATTTTTATTTTGATCAAAGCAGACATGACACAAAGTGGTTTTGAGTGGCAGGTTCCTGTGTCAATTGCTGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCAAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGGTGCATTTCCCCAAAACTTTATACTTCTTGTTCAACTTTCCATTGTAAAGAAACTACACTGCTAAATGATGCGTTCATTGTCATAATCCTGTGAAGTTATCGGCGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGTAAGACACCACCAAGAACGCTGCTGTATGATATGATATGATATCAATTGTTTTCCATTAGAACTGAAGGAAGCTTGTTTTTGTTTCTCTGGGTGTTCTTATAGGCCTTCAATGGAAGAGACATTACAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTCGTGTGATGAACTTGTTTCGGAGCTAGTTGGAGTATATACATATGCAGTGTGAATTACAGAACAACGGTTGATCAAGCTTTTTTCTCTAGTTGAATTGGTGACTCGAGAAACTCAAATGGAATTCACAACCCAACTCAACCCTCTACTTTCGAGCTGGGTTAGGTTGTGTTGTTGGGTTATTTTTTTAAAATTATTTTTAAAAAATTACTCGCATCACTAAGTTACCGTTAAAAAATAAAAAATAAAAAATTATCAAATAAATCGAAAATTCTTCCTAATACT

mRNA sequence

TAAAGTTGAAGAAACCTAAAGCACAAGTTGTAATCCATATGGCGCCAAAGAGATGCAATTCCGCACCACATCCACACAAAAATCGAAGAACTAAATCCCTCTCGTCTTTGATCTCCCAATTTCCAGGCACTTCCATCTCCATCCCTTAATCATTCTGATTCTTCCATTTCTGCAATTCGTCTCCAGAAATCATCGTTTCTGGGTTCGAATGGGATCGACTATGTTCGCCTCTGTTCCATTCTCCTGCAACTTTCATCAATCAAAGCCTCCTTCCCACATCCTCCAAAAGGGTGTTCCGGGTGTCGGTGGCGAAAAGGAGAATCGGTCTCCCATTGTGAATCGGAGATCGGTTTTGCTATCCGGCGTTTCTCTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTTCCTGTGTCAATTGCTGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCAAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGTTATCGGCGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGCCTTCAATGGAAGAGACATTACAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTCGTGTGATGAACTTGTTTCGGAGCTAGTTGGAGTATATACATATGCAGTGTGAATTACAGAACAACGGTTGATCAAGCTTTTTTCTCTAGTTGAATTGGTGACTCGAGAAACTCAAATGGAATTCACAACCCAACTCAACCCTCTACTTTCGAGCTGGGTTAGGTTGTGTTGTTGGGTTATTTTTTTAAAATTATTTTTAAAAAATTACTCGCATCACTAAGTTACCGTTAAAAAATAAAAAATAAAAAATTATCAAATAAATCGAAAATTCTTCCTAATACT

Coding sequence (CDS)

ATGGGATCGACTATGTTCGCCTCTGTTCCATTCTCCTGCAACTTTCATCAATCAAAGCCTCCTTCCCACATCCTCCAAAAGGGTGTTCCGGGTGTCGGTGGCGAAAAGGAGAATCGGTCTCCCATTGTGAATCGGAGATCGGTTTTGCTATCCGGCGTTTCTCTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTTCCTGTGTCAATTGCTGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCAAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGTTATCGGCGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGCCTTCAATGGAAGAGACATTACAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTCGTGTGA

Protein sequence

MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYSDLKRIADSFRVV

Homology

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy Swiss-Prot
Match: O49292 (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2)

HSP 1 Score: 360.5 bits (924), Expect = 1.5e-98
Identity = 179/234 (76.50%), Postives = 199/234 (85.04%), Query Frame = 0


Query: 25  LQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLS 84
           + K  PG G E E  + +++RRSV+ SG+ + S+  L    E LA VKQGLLAGR+PGLS
Sbjct: 29  IPKTSPG-GCEDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLS 88

Query: 85  EPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSS 144
           EPDE+GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLGGTEIDLRF S 
Sbjct: 89  EPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASP 148

Query: 145 KEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHN 204
           KEGRL VIVAPV RF+D +GDD  IE +G P KVI+AFGPEVIGENVEGKV++ +VAEH+
Sbjct: 149 KEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHD 208

Query: 205 GRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYSDLKRIADSFRVV 259
           GR YYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHY DLKRIA SFR+V
Sbjct: 209 GRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 63/241 (26.14%), Postives = 122/241 (50.62%), Query Frame = 0


Query: 32  VGGEKENRSPIVNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGW 91
           V   ++ + P   RR  LL   ++   A L L+   ++A ++  +   +P    P +  +
Sbjct: 31  VASSQQQQQP---RRRELLLKSAVAIPAILQLKEAPISAAREVEVGSYLP--LSPSDPSF 90

Query: 92  RTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGG--------TEIDLRFKS 151
             ++     +     G   + PY F +P +W+++ ++    G           I+++F++
Sbjct: 91  VLFKAKPSDTPALRAG--NVQPYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFEN 150

Query: 152 SKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEG-KVMNMSVAE 211
            K+G++ V+ +P+ R ++    +ATIE +G PEKVI++ GP V G + +  +++  S+ +
Sbjct: 151 EKQGKVQVVASPLIRLTN--KPNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEK 210

Query: 212 HNGRTYYQFELEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYSDLKRIADSFR 258
              +TYY++ LE P      H L  ATA G+ + LF V+    QW+     L+ I DSF+
Sbjct: 211 IGDQTYYKYVLETPFALTGSHNLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQ 262

[Close]

BLAST of Cp4.1LG06g07670 vs. NCBI nr
Match: XP_023534875.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525 bits (1352), Expect = 4.46e-188
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60
           MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHYSDLKRIADSFRVV 258
           WKRHYSDLKRIADSFRVV
Sbjct: 241 WKRHYSDLKRIADSFRVV 258

[Close]

BLAST of Cp4.1LG06g07670 vs. NCBI nr
Match: XP_022936523.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035.1 PsbP domain-containing protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 519 bits (1336), Expect = 1.23e-185
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60
           MGSTMFASVPFSCNFHQSKPPSHILQKGVP VGGEK+NRSPI+NRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHYSDLKRIADSFRVV 258
           WKRH+SDLKRIADSFRVV
Sbjct: 241 WKRHFSDLKRIADSFRVV 258

[Close]

BLAST of Cp4.1LG06g07670 vs. NCBI nr
Match: KAG6592174.1 (PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 519 bits (1336), Expect = 1.23e-185
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60
           MGSTMFA+VPFSCNFHQSKPPSHILQKGVP VGGEKENRSPI+NRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSHILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHYSDLKRIADSFRVV 258
           WKRH+SDLKRIADSFRVV
Sbjct: 241 WKRHFSDLKRIADSFRVV 258

[Close]

BLAST of Cp4.1LG06g07670 vs. NCBI nr
Match: XP_022975015.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 517 bits (1332), Expect = 5.00e-185
Identity = 254/258 (98.45%), Postives = 256/258 (99.22%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60
           MGSTMFA+VPFSCNFHQSKPPS ILQKGVP VGGEKENRSPI+NRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSQILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHYSDLKRIADSFRVV 258
           WKRHYSDLKRIADSFRVV
Sbjct: 241 WKRHYSDLKRIADSFRVV 258

[Close]

BLAST of Cp4.1LG06g07670 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 432 bits (1110), Expect = 3.55e-151
Identity = 214/260 (82.31%), Postives = 232/260 (89.23%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPI--VNRRSVLLSGVSLVSS 60
           MG+++F S  FSCNFH  K PS IL      V  + EN+ P+  +NRRS+L SG+SL+S+
Sbjct: 1   MGTSLFTSYRFSCNFHHPKLPSPILHPQSISVA-DGENQRPLGDLNRRSILASGISLLST 60

Query: 61  AGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSV 120
           A LGL   CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY FSV
Sbjct: 61  APLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYVFSV 120

Query: 121 PQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKV 180
           PQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGPPEKV
Sbjct: 121 PQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKV 180

Query: 181 ISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNG 240
           I+AFGPEVIGENVEGKV+NM+VAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+VT NG
Sbjct: 181 INAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNVTANG 240

Query: 241 LQWKRHYSDLKRIADSFRVV 258
           LQWKRHY DLKRIADSFRVV
Sbjct: 241 LQWKRHYGDLKRIADSFRVV 259

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy TrEMBL
Match: A0A6J1FDH1 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443110 PE=4 SV=1)

HSP 1 Score: 519 bits (1336), Expect = 5.94e-186
Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60
           MGSTMFASVPFSCNFHQSKPPSHILQKGVP VGGEK+NRSPI+NRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPAVGGEKDNRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHYSDLKRIADSFRVV 258
           WKRH+SDLKRIADSFRVV
Sbjct: 241 WKRHFSDLKRIADSFRVV 258

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy TrEMBL
Match: A0A6J1IFH3 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473925 PE=4 SV=1)

HSP 1 Score: 517 bits (1332), Expect = 2.42e-185
Identity = 254/258 (98.45%), Postives = 256/258 (99.22%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAG 60
           MGSTMFA+VPFSCNFHQSKPPS ILQKGVP VGGEKENRSPI+NRRSVLLSGVSLVSSAG
Sbjct: 1   MGSTMFATVPFSCNFHQSKPPSQILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAG 60

Query: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120
           LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ
Sbjct: 61  LGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQ 120

Query: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180
           DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS
Sbjct: 121 DWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVIS 180

Query: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240
           AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ
Sbjct: 181 AFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQ 240

Query: 241 WKRHYSDLKRIADSFRVV 258
           WKRHYSDLKRIADSFRVV
Sbjct: 241 WKRHYSDLKRIADSFRVV 258

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy TrEMBL
Match: A0A6J1DKA3 (psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021699 PE=4 SV=1)

HSP 1 Score: 432 bits (1110), Expect = 1.72e-151
Identity = 214/260 (82.31%), Postives = 232/260 (89.23%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSKPPSHILQKGVPGVGGEKENRSPI--VNRRSVLLSGVSLVSS 60
           MG+++F S  FSCNFH  K PS IL      V  + EN+ P+  +NRRS+L SG+SL+S+
Sbjct: 1   MGTSLFTSYRFSCNFHHPKLPSPILHPQSISVA-DGENQRPLGDLNRRSILASGISLLST 60

Query: 61  AGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSV 120
           A LGL   CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPY FSV
Sbjct: 61  APLGLHDHCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYVFSV 120

Query: 121 PQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKV 180
           PQDWEEVPVSIADLGGTEIDLRF SSKEGRLFVIVAPV+RFSDVIG+DATIEMVGPPEKV
Sbjct: 121 PQDWEEVPVSIADLGGTEIDLRFGSSKEGRLFVIVAPVRRFSDVIGEDATIEMVGPPEKV 180

Query: 181 ISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNG 240
           I+AFGPEVIGENVEGKV+NM+VAEH+GRTYYQFELEPPHVLITATAAGNRLYLF+VT NG
Sbjct: 181 INAFGPEVIGENVEGKVINMNVAEHSGRTYYQFELEPPHVLITATAAGNRLYLFNVTANG 240

Query: 241 LQWKRHYSDLKRIADSFRVV 258
           LQWKRHY DLKRIADSFRVV
Sbjct: 241 LQWKRHYGDLKRIADSFRVV 259

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy TrEMBL
Match: A0A0A0K501 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 4.42e-149
Identity = 213/268 (79.48%), Postives = 235/268 (87.69%), Query Frame = 0


Query: 1   MGSTMFASVPFSCNFHQSK------PPSHILQKGVPGVGGEKENRSPI----VNRRSVLL 60
           MG+T+F + PFS  FH         PP H L K V  V G   N++PI    +NRR  L+
Sbjct: 1   MGTTLFITNPFSSIFHHQYLPSPHLPPHHFLPKRVSAVHGA-HNQNPISSTALNRRWALV 60

Query: 61  SGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSL+SSA LGLQ++CLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNDCLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGR+FV+VAPV+RFSDVIG+DATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRVFVVVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLY 240
           MVGPPEKVI+AFGPEVIGENVEGKV++MSVAEH+GRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEHSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFSVTGNGLQWKRHYSDLKRIADSFRVV 258
           LF+VT NGLQWKRHY+DLKRIADSFR+V
Sbjct: 241 LFNVTANGLQWKRHYNDLKRIADSFRIV 267

[Close]

BLAST of Cp4.1LG06g07670 vs. ExPASy TrEMBL
Match: A0A5A7T2U1 (PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00200 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 5.92e-145
Identity = 211/268 (78.73%), Postives = 230/268 (85.82%), Query Frame = 0


Query: 1   MGST-MFASVPFSCNFHQSKPPSHILQ---------KGVPGVGGEKENRSPIVNRRSVLL 60
           MG+T +F + PFS  FHQ   PS +L            +     +    SP + RR VL+
Sbjct: 1   MGTTALFITNPFSSIFHQQNLPSPLLHPHRFLPKRVSALHRAHNQNPISSPALIRRWVLV 60

Query: 61  SGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120
           SGVSL+SSA LGLQ+ECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP
Sbjct: 61  SGVSLLSSAALGLQNECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSP 120

Query: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIE 180
           IIPYAFSVPQDWEEVPVSIADLGGTEIDLRF S KEGRLFVIVAPV+RFSDVIG+DATIE
Sbjct: 121 IIPYAFSVPQDWEEVPVSIADLGGTEIDLRFGSLKEGRLFVIVAPVRRFSDVIGEDATIE 180

Query: 181 MVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLY 240
           MVGPPEKVI+AFGPEVIGENVEGKV++MSVAE++GRTYYQFELEPPHV+ITATAAGNRLY
Sbjct: 181 MVGPPEKVINAFGPEVIGENVEGKVISMSVAEYSGRTYYQFELEPPHVIITATAAGNRLY 240

Query: 241 LFSVTGNGLQWKRHYSDLKRIADSFRVV 258
           LF+VT NGLQWKRHY DLKRIADSFRVV
Sbjct: 241 LFNVTANGLQWKRHYKDLKRIADSFRVV 268

[Close]

BLAST of Cp4.1LG06g07670 vs. TAIR 10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99
Identity = 179/234 (76.50%), Postives = 199/234 (85.04%), Query Frame = 0


Query: 25  LQKGVPGVGGEKENRSPIVNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLS 84
           + K  PG G E E  + +++RRSV+ SG+ + S+  L    E LA VKQGLLAGR+PGLS
Sbjct: 29  IPKTSPG-GCEDEWCARVLSRRSVMASGL-VSSTTALAFPREGLAVVKQGLLAGRVPGLS 88

Query: 85  EPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSS 144
           EPDE+GWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDW EVPVSIADLGGTEIDLRF S 
Sbjct: 89  EPDEEGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWNEVPVSIADLGGTEIDLRFASP 148

Query: 145 KEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHN 204
           KEGRL VIVAPV RF+D +GDD  IE +G P KVI+AFGPEVIGENVEGKV++ +VAEH+
Sbjct: 149 KEGRLSVIVAPVLRFADNLGDDVKIENIGQPAKVINAFGPEVIGENVEGKVLSSNVAEHD 208

Query: 205 GRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYSDLKRIADSFRVV 259
           GR YYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHY DLKRIA SFR+V
Sbjct: 209 GRLYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYKDLKRIASSFRIV 260

[Close]

BLAST of Cp4.1LG06g07670 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.8e-17
Identity = 63/241 (26.14%), Postives = 122/241 (50.62%), Query Frame = 0


Query: 32  VGGEKENRSPIVNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGW 91
           V   ++ + P   RR  LL   ++   A L L+   ++A ++  +   +P    P +  +
Sbjct: 31  VASSQQQQQP---RRRELLLKSAVAIPAILQLKEAPISAAREVEVGSYLP--LSPSDPSF 90

Query: 92  RTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGG--------TEIDLRFKS 151
             ++     +     G   + PY F +P +W+++ ++    G           I+++F++
Sbjct: 91  VLFKAKPSDTPALRAG--NVQPYQFVLPPNWKQLRIANILSGNYCQPKCAEPWIEVKFEN 150

Query: 152 SKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEG-KVMNMSVAE 211
            K+G++ V+ +P+ R ++    +ATIE +G PEKVI++ GP V G + +  +++  S+ +
Sbjct: 151 EKQGKVQVVASPLIRLTN--KPNATIEDLGEPEKVIASLGPFVTGNSYDSDELLKTSIEK 210

Query: 212 HNGRTYYQFELEPP------HVLITATAAGNRLYLFSVTGNGLQWKRHYSDLKRIADSFR 258
              +TYY++ LE P      H L  ATA G+ + LF V+    QW+     L+ I DSF+
Sbjct: 211 IGDQTYYKYVLETPFALTGSHNLAKATAKGSTVVLFVVSATEKQWQSSQKTLEAILDSFQ 262

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g07670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49292	1.5e-98	76.50	PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LXX5	2.5e-16	26.14	PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG06g07670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534875.1	4.46e-188	100.00	psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022936523.1	1.23e-185	98.45	psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035...	[more]
KAG6592174.1	1.23e-185	98.45	PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma...	[more]
XP_022975015.1	5.00e-185	98.45	psbP domain-containing protein 4, chloroplastic [Cucurbita maxima]	[more]
XP_022154428.1	3.55e-151	82.31	psbP domain-containing protein 4, chloroplastic [Momordica charantia]	[more]

BLAST of Cp4.1LG06g07670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDH1	5.94e-186	98.45	psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IFH3	2.42e-185	98.45	psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DKA3	1.72e-151	82.31	psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 G...	[more]
A0A0A0K501	4.42e-149	79.48	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 S...	[more]
A0A5A7T2U1	5.92e-145	78.73	PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Cp4.1LG06g07670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77090.1	1.1e-99	76.50	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]
AT3G56650.1	1.8e-17	26.14	Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 111..258 e-value: 1.5E-24 score: 89.0
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 34..258
None	No IPR available	PANTHER	PTHR31407:SF38	PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 34..258
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 114..257 e-value: 6.1E-12 score: 45.9
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 106..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g07670.1	Cp4.1LG06g07670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding