![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cp4.1LG06g07060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTACAATTTTCCAGTCTCAGCCCCAGCCTGCTCGGAGGCCCTCCCTCGCCGCCGCCGCCGCTGCCGCCGGCAGAGAACCCAGCCGGAGTATTAGATCCACTTGCAGGAGCTTTAGTTTTAGTGGGATGGTTAGGAGTGGCCGGAATGTGATGACGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCAGCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA ATGCCTACAATTTTCCAGTCTCAGCCCCAGCCTGCTCGGAGGCCCTCCCTCGCCGCCGCCGCCGCTGCCGCCGGCAGAGAACCCAGCCGGAGTATTAGATCCACTTGCAGGAGCTTTAGTTTTAGTGGGATGGTTAGGAGTGGCCGGAATGTGATGACGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCAGCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA ATGCCTACAATTTTCCAGTCTCAGCCCCAGCCTGCTCGGAGGCCCTCCCTCGCCGCCGCCGCCGCTGCCGCCGGCAGAGAACCCAGCCGGAGTATTAGATCCACTTGCAGGAGCTTTAGTTTTAGTGGGATGGTTAGGAGTGGCCGGAATGTGATGACGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCAGCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA MPTIFQSQPQPARRPSLAAAAAAAGREPSRSIRSTCRSFSFSGMVRSGRNVMTAGGDKFRRNQGRREVLRRALMPPSRKPTLRWLNFRPTPSRLSNMSMAEA Homology
BLAST of Cp4.1LG06g07060 vs. NCBI nr
Match: KAG7024857.1 (hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 180 bits (456), Expect = 1.30e-56 Identity = 97/102 (95.10%), Postives = 98/102 (96.08%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. NCBI nr
Match: XP_011652880.1 (uncharacterized protein LOC105435142 [Cucumis sativus]) HSP 1 Score: 139 bits (350), Expect = 1.83e-40 Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. NCBI nr
Match: KGN60027.2 (hypothetical protein Csa_001878 [Cucumis sativus]) HSP 1 Score: 139 bits (349), Expect = 9.62e-40 Identity = 76/103 (73.79%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. NCBI nr
Match: KAA0036871.1 (uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa] >TYJ95931.1 uncharacterized protein E5676_scaffold110G002460 [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (337), Expect = 1.75e-38 Identity = 74/104 (71.15%), Postives = 83/104 (79.81%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. NCBI nr
Match: KAG6607862.1 (hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037392.1 hypothetical protein SDJN02_01017, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 126 bits (317), Expect = 1.90e-35 Identity = 74/100 (74.00%), Postives = 79/100 (79.00%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. ExPASy TrEMBL
Match: A0A0A0LD23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852440 PE=4 SV=1) HSP 1 Score: 139 bits (350), Expect = 8.87e-41 Identity = 76/104 (73.08%), Postives = 85/104 (81.73%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. ExPASy TrEMBL
Match: A0A5A7T5L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002460 PE=4 SV=1) HSP 1 Score: 134 bits (337), Expect = 8.49e-39 Identity = 74/104 (71.15%), Postives = 83/104 (79.81%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. ExPASy TrEMBL
Match: B9N1L2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G404500 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.00e-15 Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. ExPASy TrEMBL
Match: A0A4U5P590 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000228140 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.00e-15 Identity = 40/68 (58.82%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. ExPASy TrEMBL
Match: A0A6N2MHB8 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS358945 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 2.01e-15 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Cp4.1LG06g07060 vs. TAIR 10
Match: AT3G15518.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 3.0e-08 Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|