Cp4.1LG06g06670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g06670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Exonuclease domain-containing protein
Location	Cp4.1LG06: 4149833 .. 4153829 (-)
RNA-Seq Expression	Cp4.1LG06g06670
Synteny	Cp4.1LG06g06670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGGCGGCGTCTGGTTTCACGAGAGAAAAGAGAGCGAAGAGGACGAGAAATTGAAACATGGAATTGGAGAGATTCATGTTTGATTTGTTAAATCTCCGGAATATCAGTGTCTGGATTAGAAGAACAATGATCTTCCATTGCAGGTATTTAAATCTGAAATCTGTGAAGCATTTGATTCATTGCTGCTTTGATTTTTTTTGAATTTGCATTTTCCATTTTTTCCATTTCGATCTTCAATGGTCTCCTTGAATTAATTATTTTCTTTCATTATAATTAGAAATTTTAAAACTACCAGAACTATAATTAAAAGAAAATTCAAAGTGATATTTCAATCAACTTTTTATAATATGGATATCTACAAATTTGATAATATTTATAAAATATGTATATATATATATATATATATGTATGTTCCTGCCGCAGAATTCGACCACCCCAACGTCCGTCGTCTTCTCTGCTCCGGTAGACCGTCGGAGTGTAGACTGTACATTAGCCGCTCACTTCCGCTCATTTCAAATCAATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGGTATTTTTTTTTAATTCTGGATTTGAGCTGTTGCACTTGCGTTTTTCGAATGCCTCGTTGTTTTCTTTGCTTACATTTTCTGAAGTGACTGAAGATTCTACTTGATTGTGTGTGCCATGTGGTTAGTTTGGTGTTGTACACCACATGTTCGACGATATTCCTCAGAGAACTTTTGCTCGTTTTTCTTGCGTGTTAAGCTGTCTGCTGGTTGAATTTGGTAACCCACCAGAACAAAATTGGAAATGATACGAATTTACGACCATTTTCCACTATTGATCAGACTATTGTCTTATGTTGTGTGTTCTAGTGGTTCTTACTGAAGTTCCCTAGCTGAAATTTTGCAGCCAAATTTAGATATATTCATGTGACCCTGTTTTGTAGATGGATGATCCACTCCACGTAAAGAAGTTCAACCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTCTACCTGCTTCTTTGTGACCTGCTCACTCTTGCTCTTTGTTATGCATTTATTATTTATCTTTCCGCTCGGCAGATTTCATATTTTATGCATCTCTATATTTCTCTGTTACCTGTTTTTTCAAGATTTTAATCTCAAAGAGCATGTAGAAAGAATCCCTTTTAGGCTTCCCCTCAAGATTTTTAAAACGATCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAATGAGGACAATATCTATTAGCGGTGGGCTTGAGATGTTATAGGATGACTTACTACCCGGATGGACATATTGATTGCATGTAATATAAGCATGGAGTAAAATGTTAGCTTAATTTGGAACCATTTTAGCATATGTAATGTGTATTTAGGAAAATCGGCTTCTGTGCGGTTGAGAGATGACACTGACCGGCTTATTATGCTTGTAACCCCATCATGTAAAATGGTTTAACTTCTAAGAACGCCAACAAATGTTCTTTGGATGATTAAGAACAAGAAATTTATGGTTTTTCTTTTTTGGTTCTACGTTCTTTGACGACTGCCTTAAATCCTTCCTCAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTATGTCTAATCTATGTGTGGTGAAGGCTTGATAATGTTCGACATTATTGTGGATTCATTTATTTCTTAGGATTTAGGACAAATATATTTCAAAACCTGATTGCATGGTGTACATGTCCAATGCTAATTAGGTAGGATGTGAGATCCCACATCGGTTAGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAAACTCTCCCTAGTAGACGCGTTTAAAAACCGTGAGGCTGACGGTGATATGTAATGGGCCAAAGTAGACAATATCTGCTATCGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGTTAGACACCGAACGGTACGCCATCGAGGACACTAGGCCCCCAAGGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGTGGAGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGCATTTTAGAACCGTGAGGCTGACAGCGATATGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGGGCTATTACATAGGACGACTTTTTCTTCGGTATGTTGACAAGTGCCGTTAAGATTCTAATAGACTTCTTTTTACTAGCTGATAGTTCCATATTATATTTTCAGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGCTGTGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGGTAAGCCTCCTTTTCTCGATCTACTTTTAAGTTTTACAATTCCTTGCTAAATTGTTCATTTATTCATATTGTGAATGTGCTATGTGTAACAGAAGTGTTGATGATTTATGCTATCTTTTACTTGTACCAGTGGAAACTGGGATATAAAAACTCAGGTCCCACATCAATGCAGTGTGTCAAACATGAAACTTCCCGACTATTTTATGGAGTGGATCAATATCAAAGATGTCTATCTCAACTTTTACCAAAAGAAGGTACGATAGTCCATCAAAATAAGAGTTTGTAGCATCTTGAGTGGGACGTAACATCGGCTAATTAAGGAGTTGATCATGGATTTATAAGTAAAGAATACATCTTCATTGGTTTGAGGCCTTTTGGGAACCAAAATCAAAGCCATGAGAACTTATGCTTAAAGTGGACAATATCATACCATTTTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTTACTTTTGACTACACCTTTGAGGCTAGCAACTTCTTTGTTTGACAATTGAGGATTCTATTGACATGGCTAAGTTAAGGACATGACTCTATACCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTCGAACCTAAGCTCTCATAGTTTTGTTTTGGACTTCTCAAAAGGCCTCGTACTAATAGAGATAGTATTCCTCACTTATGAACCCATGATCTTCCACCAAATTAGTCAACGTGGGACTCTCTCCCAACCATCCTAACACTATCTGCTTTTGGTCACGATTCAACCTTATGTTTAGTTTCTCTGAGAATGGAGCTTACACGACCGATTATCGATGAAGTTATTTACTTTGGATGGTAATTACTAGGCGACAGGAATGGCGACGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGACGGTGCGCATTTGCAGATCACTGCTCGTAGGAATCCCAATTCTCCTCAACAAGTTAAGTTCCGTTTTGAGAACCGTATTTAATGGCGGCCATCTTCAGCAACTTATCATCAATATTTGTCTGGATGATTCTTAAATTAGCTACAAGAGATCTCATGAGGTGTAAAACTATGAACTCGTGAACATGTCGTGTATTTTTTAGCGCCTTTTTTTCTCGTTCTAACAATGGCACAAAGGAGATTGAATATTTAGAAAATTTATATTTTATTTATTGAGTTAGACTCAAACATTAG

mRNA sequence

CAAGGCGGCGTCTGGTTTCACGAGAGAAAAGAGAGCGAAGAGGACGAGAAATTGAAACATGGAATTGGAGAGATTCATGTTTGATTTGTTAAATCTCCGGAATATCAGTGTCTGGATTAGAAGAACAATGATCTTCCATTGCAGAATTCGACCACCCCAACGTCCGTCGTCTTCTCTGCTCCGGTAGACCGTCGGAGTGTAGACTGTACATTAGCCGCTCACTTCCGCTCATTTCAAATCAATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACGTAAAGAAGTTCAACCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGCTGTGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGTGGAAACTGGGATATAAAAACTCAGGCGACAGGAATGGCGACGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGACGGTGCGCATTTGCAGATCACTGCTCGTAGGAATCCCAATTCTCCTCAACAAGTTAAGTTCCGTTTTGAGAACCGTATTTAATGGCGGCCATCTTCAGCAACTTATCATCAATATTTGTCTGGATGATTCTTAAATTAGCTACAAGAGATCTCATGAGGTGTAAAACTATGAACTCGTGAACATGTCGTGTATTTTTTAGCGCCTTTTTTTCTCGTTCTAACAATGGCACAAAGGAGATTGAATATTTAGAAAATTTATATTTTATTTATTGAGTTAGACTCAAACATTAG

Coding sequence (CDS)

ATGTTTGTGAGAGCGCCGCTGCTTAAGGTTTCGTCATTCTACTCAGTCCCATGTCATTCTCTGGTTCCGTTGTCTCTCTCTGCCGCAATTTGTTCTTCTCCACGGACACCTTTAGCTATCCGATGTCATTCATCTCTCCCCACAGCCCACGAACCATCTTCTTCGGCTCCCTCTGAATCCCTCGATGTGGTGCATAATCGTTGGAGGCCCATGTGTTTGTATTACACACAGAGCAAGTGTACAATGATGGATGATCCACTCCACGTAAAGAAGTTCAACCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGCTCAAAACATATGCGAACTCAGGATATTGAGTTTTTTCTAGTGCTTGATTTGGAGGGAAAAGTTGAAATAATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACACTGGATGTGACGGGTTTTTTCCACAGGTTTGTTAGGCCTTCAAGAATGAGTGAACGAAGGATAAATGAGTACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTACAAGGATGTTATACAACAGTTCGAAGATTGGCTGGTTGAGCATCAGCTGTGGAGGAAGGAACTGGGTGGTGTTCTTGATCGAGCAGCATTCGTGACATGTGGAAACTGGGATATAAAAACTCAGGCGACAGGAATGGCGACGATGATGAGACAACTCGAAATACCCTTGGTGGGAAGCCATCATCTTGGTATAGATGACACAAAGAACATCGTGAGAGTGTTGCAGAGAATGGTTGCTGACGGTGCGCATTTGCAGATCACTGCTCGTAGGAATCCCAATTCTCCTCAACAAGTTAAGTTCCGTTTTGAGAACCGTATTTAA

Protein sequence

MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSESLDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQQVKFRFENRI

Homology

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BLAST of Cp4.1LG06g06670 vs. ExPASy Swiss-Prot
Match: Q8W566 (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana OX=3702 GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.3e-81
Identity = 159/329 (48.33%), Postives = 213/329 (64.74%), Query Frame = 0


Query: 4   RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPS- 63
           R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  -ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIE 123
              ++   N RWRPMCLYYT  KCT MDDP H++ FNHD S+EL+V  A  +  ++Q+  
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 FFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVD 183
           FFLV+DLEGKVEI+EFP+++V+AKT++V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKT---------- 243
           RVWHDTAI +K V+++FE WL EH LW K+    L+ AAFVTCGNWDIKT          
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 -----------------------QATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM 293
                                  +A GM +MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy Swiss-Prot
Match: Q7TMF2 (3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 46/183 (25.14%), Postives = 79/183 (43.17%), Query Frame = 0


Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  TL++   F ++VRP      +++E+     G  G+ +   D A  + 
Sbjct: 146 EIIEFPVVLLNTHTLEIEDTFQQYVRPE--VNAQLSEFC---IGLTGITQDQVDRADAFP 205

Query: 188 DVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWD------------------------ 247
            V+++  +W+   +L      G   +   +T G+WD                        
Sbjct: 206 QVLKKVIEWMKSKEL------GTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWI 265

Query: 248 -----------IKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQI 276
                      +    T +  M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I
Sbjct: 266 NIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRI 317

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy Swiss-Prot
Match: Q5FVR4 (3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.0e-10
Identity = 46/183 (25.14%), Postives = 80/183 (43.72%), Query Frame = 0


Query: 128 EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWHDTAILYK 187
           EIIEFPV+L+N  +L++   F ++VRP   S+  ++E+     G  G+ +   D A  + 
Sbjct: 146 EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSEFC---IGLTGITQDQVDRADAFP 205

Query: 188 DVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWD------------------------ 247
            V+++  +W+   +L      G   +   +T G+WD                        
Sbjct: 206 QVLKKVIEWMKSKEL------GTKYKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWI 265

Query: 248 -----------IKTQATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADGAHLQI 276
                      +    T +  M+ +L +   G  H G+DD+KNI R+  RM+ DG  L+I
Sbjct: 266 NIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELRI 317

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy Swiss-Prot
Match: A6QLH5 (ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 8.9e-10
Identity = 48/208 (23.08%), Postives = 88/208 (42.31%), Query Frame = 0


Query: 113 QDIEFFLVLDLEGKV--------EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINE 172
           Q   +FLVLD E           EIIEFP++ +N +T+++   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 173 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLD---RAAFVTCGN 232
           +        G+ +   D     + V+++ ++W+ +         G+LD   ++ FVTCG+
Sbjct: 201 FCT---ELTGIIQAMVDGQPSLQQVLERVDEWMAKE--------GLLDPNVKSIFVTCGD 260

Query: 233 WDIKTQ----------------------------------ATGMATMMRQLEIPLVGSHH 276
           WD+K                                      G+  M + L +  +G  H
Sbjct: 261 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPH 320

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy Swiss-Prot
Match: O43414 (ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 8.9e-10
Identity = 48/208 (23.08%), Postives = 88/208 (42.31%), Query Frame = 0


Query: 113 QDIEFFLVLDLEGKV--------EIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINE 172
           Q   +FLVLD E           EIIEFP++ +N +T+++   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 173 YIEGKYGKFGVDRVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLD---RAAFVTCGN 232
           +        G+ +   D     + V+++ ++W+ +         G+LD   ++ FVTCG+
Sbjct: 201 FCT---ELTGIIQAMVDGQPSLQQVLERVDEWMAKE--------GLLDPNVKSIFVTCGD 260

Query: 233 WDIKTQ----------------------------------ATGMATMMRQLEIPLVGSHH 276
           WD+K                                      G+  M + L +  +G  H
Sbjct: 261 WDLKVMLPGQCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPH 320

[Close]

BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: XP_023535410.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574 bits (1480), Expect = 6.46e-206
Identity = 292/325 (89.85%), Postives = 292/325 (89.85%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES
Sbjct: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
           LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: XP_022976542.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima])

HSP 1 Score: 564 bits (1454), Expect = 5.92e-202
Identity = 284/325 (87.38%), Postives = 289/325 (88.92%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MFVRAPLLKVSSFYS+PCHSLVPLSLS+AICSSPRTPLAIRCHSSLPTAHEPSSSAPSES
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
           LDVVHNRWRPMCLYYTQSKCTMMDDPLH+KKFNHDISRELQVDVASSKHMRTQDIEFFLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLVEHQ+WRK+LGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGMA MMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: XP_022935722.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata])

HSP 1 Score: 564 bits (1454), Expect = 5.92e-202
Identity = 284/325 (87.38%), Postives = 289/325 (88.92%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MFVRAPLLKVSSFYS+PCHSLVPL LS+AICSSPRTPL+IRCHSSLPTAH+PSSSAPSES
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSES 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
           LDVVHNRWRPMCLYYTQSKCTMMDDPLH+KKFNHDISRELQVDVASSKHMRTQDIEFFLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGM TMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: KAG7024805.1 (putative exonuclease domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 541 bits (1393), Expect = 2.07e-193
Identity = 274/292 (93.84%), Postives = 276/292 (94.52%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAH+PSSSAPSES
Sbjct: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHDPSSSAPSES 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
           LDVVHNRWRPMCLYYTQSKCTMMDDPLH+KKFNHDISRELQVDVASSKHMRTQDIEFFLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTLDVTGFFHR   PSRMSERRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHR---PSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQATGMATMMRQLEI 240
           DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAF           ATGM TMMRQLEI
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAF-----------ATGMTTMMRQLEI 240

Query: 241 PLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQQVKFRFENRI 292
           PLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQ VKFRFENRI
Sbjct: 241 PLVGSHHLGIDDTKNIVRVLQRMVADGAHLQITARRNPNSPQHVKFRFENRI 278

[Close]

BLAST of Cp4.1LG06g06670 vs. NCBI nr
Match: XP_008463707.1 (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo])

HSP 1 Score: 506 bits (1304), Expect = 4.22e-179
Identity = 251/325 (77.23%), Postives = 272/325 (83.69%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK+SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+LP +HEPSSSAPS+ 
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILY DVIQQFEDWLV+HQLWRKE GGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGMATMMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy TrEMBL
Match: A0A6J1IG11 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita maxima OX=3661 GN=LOC111476907 PE=4 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 2.87e-202
Identity = 284/325 (87.38%), Postives = 289/325 (88.92%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MFVRAPLLKVSSFYS+PCHSLVPLSLS+AICSSPRTPLAIRCHSSLPTAHEPSSSAPSES
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
           LDVVHNRWRPMCLYYTQSKCTMMDDPLH+KKFNHDISRELQVDVASSKHMRTQDIEFFLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLVEHQ+WRK+LGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGMA MMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy TrEMBL
Match: A0A6J1F6E0 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita moschata OX=3662 GN=LOC111442549 PE=4 SV=1)

HSP 1 Score: 564 bits (1454), Expect = 2.87e-202
Identity = 284/325 (87.38%), Postives = 289/325 (88.92%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MFVRAPLLKVSSFYS+PCHSLVPL LS+AICSSPRTPL+IRCHSSLPTAH+PSSSAPSES
Sbjct: 1   MFVRAPLLKVSSFYSIPCHSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSES 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
           LDVVHNRWRPMCLYYTQSKCTMMDDPLH+KKFNHDISRELQVDVASSKHMRTQDIEFFLV
Sbjct: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGM TMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG
Sbjct: 241 DYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy TrEMBL
Match: A0A0A0L4N2 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930 PE=4 SV=1)

HSP 1 Score: 506 bits (1304), Expect = 2.04e-179
Identity = 251/325 (77.23%), Postives = 270/325 (83.08%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+ P +HEPSSSA SE 
Sbjct: 1   MFLRASLLKFSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSEF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD ++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILYKDVIQQFEDWLV+HQLWRKELGGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGMATMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy TrEMBL
Match: A0A1S3CJV9 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501789 PE=4 SV=1)

HSP 1 Score: 506 bits (1304), Expect = 2.04e-179
Identity = 251/325 (77.23%), Postives = 272/325 (83.69%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPSES 60
           MF+RA LLK+SSFYS+PCH L+P+SLS++ICSSPRTP +IRCHS+LP +HEPSSSAPS+ 
Sbjct: 1   MFLRASLLKLSSFYSIPCHPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQF 60

Query: 61  LDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIEFFLV 120
            DV  NRWRP CLY+T  +CTMMDDPLH+KKFNHDISRELQVDVA S HMRTQD+++FLV
Sbjct: 61  PDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLV 120

Query: 121 LDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVWH 180
           LDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWH
Sbjct: 121 LDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVWH 180

Query: 181 DTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ------------- 240
           DTAILY DVIQQFEDWLV+HQLWRKE GGVLDRAAFVTCGNWDIKTQ             
Sbjct: 181 DTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLP 240

Query: 241 --------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVADG 292
                               ATGMATMMRQLE+ LVGSHHLGIDDTKNIVRVLQRMV DG
Sbjct: 241 DYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGDG 300

[Close]

BLAST of Cp4.1LG06g06670 vs. ExPASy TrEMBL
Match: A0A6J1CCI3 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica charantia OX=3673 GN=LOC111010332 PE=4 SV=1)

HSP 1 Score: 481 bits (1237), Expect = 3.50e-169
Identity = 250/328 (76.22%), Postives = 265/328 (80.79%), Query Frame = 0


Query: 1   MFVRAPLLKVSSFYSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPS-E 60
           MF+RAPLLKVSSFYS+PC+ LVPLSL +++ SS RTP  IRCH+SLP AHEPSSSAP   
Sbjct: 1   MFLRAPLLKVSSFYSIPCYPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPPH 60

Query: 61  SLDVVHNRWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQ--DIEF 120
           S +   NRWRPMCLYYTQ KCTMMDDPLH+KKFNHDISR LQV+ A S H RTQ  DI+F
Sbjct: 61  SPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRVLQVN-ARSNHTRTQSQDIDF 120

Query: 121 FLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDR 180
           FLVLDLEGKVEIIEFPVILV+AKTL VTGFFHRFVRPS MSERRINEYIEGKYGKFGVDR
Sbjct: 121 FLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSNMSERRINEYIEGKYGKFGVDR 180

Query: 181 VWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQ---------- 240
           VWHDTAI YK+VIQQFEDWLVEHQLW+KELGG LDRAAFVTCGNWDIKTQ          
Sbjct: 181 VWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSNI 240

Query: 241 -----------------------ATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMV 292
                                  ATGM TMMRQLEIPL+GSHHLGIDDTKNIVRVLQRMV
Sbjct: 241 ELPNYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRMV 300

[Close]

BLAST of Cp4.1LG06g06670 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 303.1 bits (775), Expect = 2.4e-82
Identity = 159/329 (48.33%), Postives = 213/329 (64.74%), Query Frame = 0


Query: 4   RAPLLKVSSF----YSVPCHSLVPLSLSAAICSSPRTPLAIRCHSSLPTAHEPSSSAPS- 63
           R  L ++S F    +S P  +L        +C+S  +       S   ++   SSS+PS 
Sbjct: 9   RVSLSRISPFRDTRFSYPA-TLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPST 68

Query: 64  -ESLDVVHN-RWRPMCLYYTQSKCTMMDDPLHVKKFNHDISRELQVDVASSKHMRTQDIE 123
              ++   N RWRPMCLYYT  KCT MDDP H++ FNHD S+EL+V  A  +  ++Q+  
Sbjct: 69  FSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFN 128

Query: 124 FFLVLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVD 183
           FFLV+DLEGKVEI+EFP+++V+AKT++V   FHRFVRP++MSE+ IN+YIEGKYG+ GVD
Sbjct: 129 FFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVD 188

Query: 184 RVWHDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKT---------- 243
           RVWHDTAI +K V+++FE WL EH LW K+    L+ AAFVTCGNWDIKT          
Sbjct: 189 RVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSN 248

Query: 244 -----------------------QATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVLQRM 293
                                  +A GM +MMRQ  I L+GSHHLGIDDTKNI RV+QRM
Sbjct: 249 INLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRM 308

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g06670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W566	3.3e-81	48.33	Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis t...	[more]
Q7TMF2	3.1e-10	25.14	3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2	[more]
Q5FVR4	4.0e-10	25.14	3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1	[more]
A6QLH5	8.9e-10	23.08	ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1	[more]
O43414	8.9e-10	23.08	ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2	[more]

BLAST of Cp4.1LG06g06670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535410.1	6.46e-206	89.85	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita pepo ...	[more]
XP_022976542.1	5.92e-202	87.38	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxim...	[more]
XP_022935722.1	5.92e-202	87.38	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita mosch...	[more]
KAG7024805.1	2.07e-193	93.84	putative exonuclease domain-containing protein, partial [Cucurbita argyrosperma ...	[more]
XP_008463707.1	4.22e-179	77.23	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]

BLAST of Cp4.1LG06g06670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG11	2.87e-202	87.38	uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita max...	[more]
A0A6J1F6E0	2.87e-202	87.38	uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita mos...	[more]
A0A0A0L4N2	2.04e-179	77.23	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930...	[more]
A0A1S3CJV9	2.04e-179	77.23	uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cu...	[more]
A0A6J1CCI3	3.50e-169	76.22	uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica cha...	[more]

BLAST of Cp4.1LG06g06670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15140.1	2.4e-82	48.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 228..291 e-value: 2.7E-12 score: 48.4 coord: 105..227 e-value: 2.2E-25 score: 91.2
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 226..292 coord: 38..227
None	No IPR available	PANTHER	PTHR23044:SF68	OS06G0353400 PROTEIN	coord: 226..292 coord: 38..227
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 118..263 e-value: 1.78043E-32 score: 116.166
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 115..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g06670.1	Cp4.1LG06g06670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding