Cp4.1LG06g06660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTATTATCATAAGTTCTTTTGCCTTGTGCTCATATTGTTCTTGTGTTCTTCCTCCATTTCCGAAAGTCGCTTGCTTTCTTCTTCTTCTTCTTTCTCTTCTTCGGCGAATACGAAGAACGAGATCTTTGTAAAGAACGTCAAAGAACTCTTGAAGGTTATCATCGAAGAAAAAGAGAAGCTTGGACGACATTTCGTGTCCAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGA ATGGCTTATTATCATAAGTTCTTTTGCCTTGTGCTCATATTGTTCTTGTGTTCTTCCTCCATTTCCGAAAGTCGCTTGCTTTCTTCTTCTTCTTCTTTCTCTTCTTCGGCGAATACGAAGAACGAGATCTTTGTAAAGAACGTCAAAGAACTCTTGAAGGTTATCATCGAAGAAAAAGAGAAGCTTGGACGACATTTCGTGTCCAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGA ATGGCTTATTATCATAAGTTCTTTTGCCTTGTGCTCATATTGTTCTTGTGTTCTTCCTCCATTTCCGAAAGTCGCTTGCTTTCTTCTTCTTCTTCTTTCTCTTCTTCGGCGAATACGAAGAACGAGATCTTTGTAAAGAACGTCAAAGAACTCTTGAAGGTTATCATCGAAGAAAAAGAGAAGCTTGGACGACATTTCGTGTCCAAAAGACTCAGCCCTGGAGGACCTGATCCACGCCATCATTGA MAYYHKFFCLVLILFLCSSSISESRLLSSSSSFSSSANTKNEIFVKNVKELLKVIIEEKEKLGRHFVSKRLSPGGPDPRHH Homology
BLAST of Cp4.1LG06g06660 vs. ExPASy Swiss-Prot
Match: Q3EDH8 (CLAVATA3/ESR (CLE)-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=CLE3 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.2e-04 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. NCBI nr
Match: KGN55081.1 (hypothetical protein Csa_012463 [Cucumis sativus]) HSP 1 Score: 101 bits (252), Expect = 4.90e-26 Identity = 62/78 (79.49%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. NCBI nr
Match: KAF7836665.1 (CLAVATA3/ESR (CLE)-related protein 1-like [Senna tora]) HSP 1 Score: 54.7 bits (130), Expect = 1.86e-07 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. NCBI nr
Match: XP_031267366.1 (CLAVATA3/ESR (CLE)-related protein 3-like [Pistacia vera]) HSP 1 Score: 53.5 bits (127), Expect = 7.04e-07 Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. NCBI nr
Match: XP_031265123.1 (CLAVATA3/ESR (CLE)-related protein 3-like [Pistacia vera]) HSP 1 Score: 51.6 bits (122), Expect = 3.97e-06 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. NCBI nr
Match: KAE9617029.1 (hypothetical protein Lalb_Chr03g0031051 [Lupinus albus] >KAF1897280.1 hypothetical protein Lal_00034983 [Lupinus albus]) HSP 1 Score: 48.9 bits (115), Expect = 2.37e-05 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. ExPASy TrEMBL
Match: A0A0A0L4M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G627800 PE=4 SV=1) HSP 1 Score: 101 bits (252), Expect = 2.37e-26 Identity = 62/78 (79.49%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. ExPASy TrEMBL
Match: A0A6A5PKV4 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00034983 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.15e-05 Identity = 22/45 (48.89%), Postives = 31/45 (68.89%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. ExPASy TrEMBL
Match: A0A444Y3W2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B08g092417 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.90e-05 Identity = 21/41 (51.22%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. ExPASy TrEMBL
Match: A0A6A4MZR2 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lalb_Chr25g0286011 PE=4 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.49e-05 Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. ExPASy TrEMBL
Match: A0A2P5DTM2 (CLAVATA3/ESR (CLE)-related protein OS=Parasponia andersonii OX=3476 GN=PanCLE1 PE=4 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 4.62e-05 Identity = 36/74 (48.65%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of Cp4.1LG06g06660 vs. TAIR 10
Match: AT1G06225.1 (CLAVATA3/ESR-RELATED 3 ) HSP 1 Score: 47.0 bits (110), Expect = 8.5e-06 Identity = 37/84 (44.05%), Postives = 48/84 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|