Cp4.1LG06g06610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g06610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	NAC domain-containing protein
Location	Cp4.1LG06: 4167350 .. 4169351 (+)
RNA-Seq Expression	Cp4.1LG06g06610
Synteny	Cp4.1LG06g06610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCTGGGTTTTGAGCTTTCTCTTCTGGGTTCCCCTTCCTTTTCCGACCTCTCCCCTGTTTCCTCTGTTTTTCCTCCACCAACATGGACGTTTCTTCATTCTCTCGCTACGACTCCGCCGCCGTCGACCACCCCCACCCCCACCACCTCCCCCCCGGCTTCCGCTTCCACCCCACCGACGAGGAACTCATCACCTACTACCTTCTCAAGAAAGTCCTCGACAGTAGCTTCAGTGGCAGAGCCATTGCAGAGGTCGACCTCAACAAGTGCGAGCCATGGGAGCTTCCCGGTAATTAGCTTCATTATCTCTTAATTTAAACAAACCCCATTTGATTTTGTTGTCTGTAATCGTTAATTAATGGAGGATTTTACGTAATTAATCAGAGAAAGCGAAAATGGGAGAGAAGGAGTGGTATTTCTTTAGCCTTAGAGACCGGAAGTATCCGACCGGTCTCCGGACCAACAGGGCGACGGAGGCTGGGTACTGGAAAGCCACCGGAAAAGACAGGGAAATTTATAGTGTCAAAACGTGTTCGTTGGTGGGGATGAAGAAGACGTTGGTGTTTTACAGAGGAAGAGCTCCCAAGGGTGAAAAGAGTAACTGGGTTATGCATGAATATCGCCTTGAAGGCAAATTTGCTTACCATTATCTCTCCACAAACTCCAAGGTTCTTCCCTTTTCTTCTTCTTCATCGATCGTACCCTACTTCCCAATTTTGTAACGGCCCGAGTACACCGCTAGTAAATATTGTCCTCGGATTTTAAAACCGGTATCTTAGGGAGAGGTTTCCACTCTTGTTAAGAATGTTTCATTCTCCTCCCCAACCGGTGTGGAATTTCACAATCTACCCTTTGTGGGTTCAGTTGTTTTCTACTCCAATTGACGTGGGATCTTAACGTCTTTGCTGGCACACTGACACGTGTCCACCCGCTTTCGGGACTCAGCTTCCTTGCTCGTACATGGACTAGTGTCTAGCTCTTACTCCATTTGAAACCGTACAAGTCCACTACTACTAGATATTGTCTTTTTTGTCCTTTTCTTTTCAGGGTTATCTTTGAATTCTTAAAACGTGTCTTTTAAGTAGAGGTTTCTTAGGCTCGATGCTTTAATTTGCACTAATTTTGTTAACCCTCGTGAAATTAGGGTTTTATTTGTGTGTTTTTCTATGAATTATGAACATATGATTTGAATGTGACATTAATTATCTAAATAATTATTGAATTAATTTCAATTTATTAAAAGCTTGGATTTTTAACTATATGTTATGTATGAATGTAATTCAGGATGAATGGGTGATTTCGAGGGTGTTTCAAAAGAGTGGCACCGGAGTTGGTGGCGGAGTTGACGGCGGCGGGGGTTCGAGGAAACCGAGGTTTATTCCCGGTACGGTGAGTGTATACCCAGAACCAAGCTCTCCGTCGTCTGTGTCTCTCCCGCCGCTGCTAGATTCGTCTTTATACTCTGCTCCGGTGGCCGCCACGGCTGTTTCCGGGAACATAACTGACCGTGACAGCTGCTCGTATAACAGCCCAAGAGAGCACGTGTCCTGTTTCTCCACCACCGCCGGCGGTAGCTTTAACATCCCAAGTTACGATTTTGCCACTCCCCCTCCACTTCTCGCCGCCGTTGACCCATCTCCCCGCTTCCACCGGAACATGGGTCTGTCGGCGTTCCCAAGTCTCCGGAGCTTGCAGGAGAATCTCCAACTTCCGTTCTTCTATTCGCCGGTCAATCTTCCTTCTCCGCCACCACCGCCGCTCCACCATGGCAACATGTCCTCGTCAGCTGACGTCGTCGCCTGTAATTCCGCCGGGAATTGGGGTGTCTCCGACGAACCCAGATCCATGAACTCCACTGAACTTGACTGCATGTGGTCCTACTGAATTTCTCAGTTCATCAGAAGTAGCTAGCTGCGTTGACTTTTTCGTTTCCAAAAGTCTACCTTAAATGATGTATGAATGTATTATCTTGTTTTAATTTCTATGTATTTTAAATGAATTTA

mRNA sequence

CACCTGGGTTTTGAGCTTTCTCTTCTGGGTTCCCCTTCCTTTTCCGACCTCTCCCCTGTTTCCTCTGTTTTTCCTCCACCAACATGGACGTTTCTTCATTCTCTCGCTACGACTCCGCCGCCGTCGACCACCCCCACCCCCACCACCTCCCCCCCGGCTTCCGCTTCCACCCCACCGACGAGGAACTCATCACCTACTACCTTCTCAAGAAAGTCCTCGACAGTAGCTTCAGTGGCAGAGCCATTGCAGAGGTCGACCTCAACAAGTGCGAGCCATGGGAGCTTCCCGAGAAAGCGAAAATGGGAGAGAAGGAGTGGTATTTCTTTAGCCTTAGAGACCGGAAGTATCCGACCGGTCTCCGGACCAACAGGGCGACGGAGGCTGGGTACTGGAAAGCCACCGGAAAAGACAGGGAAATTTATAGTGTCAAAACGTGTTCGTTGGTGGGGATGAAGAAGACGTTGGTGTTTTACAGAGGAAGAGCTCCCAAGGGTGAAAAGAGTAACTGGGATGAATGGGTGATTTCGAGGGTGTTTCAAAAGAGTGGCACCGGAGTTGGTGGCGGAGTTGACGGCGGCGGGGGTTCGAGGAAACCGAGGTTTATTCCCGGTACGGTGAGTGTATACCCAGAACCAAGCTCTCCGTCGTCTGTGTCTCTCCCGCCGCTGCTAGATTCGTCTTTATACTCTGCTCCGGTGGCCGCCACGGCTGTTTCCGGGAACATAACTGACCGTGACAGCTGCTCGTATAACAGCCCAAGAGAGCACGTGTCCTGTTTCTCCACCACCGCCGGCGGTAGCTTTAACATCCCAAGTTACGATTTTGCCACTCCCCCTCCACTTCTCGCCGCCGTTGACCCATCTCCCCGCTTCCACCGGAACATGGGTCTGTCGGCGTTCCCAAGTCTCCGGAGCTTGCAGGAGAATCTCCAACTTCCGTTCTTCTATTCGCCGGTCAATCTTCCTTCTCCGCCACCACCGCCGCTCCACCATGGCAACATGTCCTCGTCAGCTGACGTCGTCGCCTGTAATTCCGCCGGGAATTGGGGTGTCTCCGACGAACCCAGATCCATGAACTCCACTGAACTTGACTGCATGTGGTCCTACTGAATTTCTCAGTTCATCAGAAGTAGCTAGCTGCGTTGACTTTTTCGTTTCCAAAAGTCTACCTTAAATGATGTATGAATGTATTATCTTGTTTTAATTTCTATGTATTTTAAATGAATTTA

Coding sequence (CDS)

ATGGACGTTTCTTCATTCTCTCGCTACGACTCCGCCGCCGTCGACCACCCCCACCCCCACCACCTCCCCCCCGGCTTCCGCTTCCACCCCACCGACGAGGAACTCATCACCTACTACCTTCTCAAGAAAGTCCTCGACAGTAGCTTCAGTGGCAGAGCCATTGCAGAGGTCGACCTCAACAAGTGCGAGCCATGGGAGCTTCCCGAGAAAGCGAAAATGGGAGAGAAGGAGTGGTATTTCTTTAGCCTTAGAGACCGGAAGTATCCGACCGGTCTCCGGACCAACAGGGCGACGGAGGCTGGGTACTGGAAAGCCACCGGAAAAGACAGGGAAATTTATAGTGTCAAAACGTGTTCGTTGGTGGGGATGAAGAAGACGTTGGTGTTTTACAGAGGAAGAGCTCCCAAGGGTGAAAAGAGTAACTGGGATGAATGGGTGATTTCGAGGGTGTTTCAAAAGAGTGGCACCGGAGTTGGTGGCGGAGTTGACGGCGGCGGGGGTTCGAGGAAACCGAGGTTTATTCCCGGTACGGTGAGTGTATACCCAGAACCAAGCTCTCCGTCGTCTGTGTCTCTCCCGCCGCTGCTAGATTCGTCTTTATACTCTGCTCCGGTGGCCGCCACGGCTGTTTCCGGGAACATAACTGACCGTGACAGCTGCTCGTATAACAGCCCAAGAGAGCACGTGTCCTGTTTCTCCACCACCGCCGGCGGTAGCTTTAACATCCCAAGTTACGATTTTGCCACTCCCCCTCCACTTCTCGCCGCCGTTGACCCATCTCCCCGCTTCCACCGGAACATGGGTCTGTCGGCGTTCCCAAGTCTCCGGAGCTTGCAGGAGAATCTCCAACTTCCGTTCTTCTATTCGCCGGTCAATCTTCCTTCTCCGCCACCACCGCCGCTCCACCATGGCAACATGTCCTCGTCAGCTGACGTCGTCGCCTGTAATTCCGCCGGGAATTGGGGTGTCTCCGACGAACCCAGATCCATGAACTCCACTGAACTTGACTGCATGTGGTCCTACTGA

Protein sequence

MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSNWDEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDSCSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCMWSY

Homology

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.0e-81
Identity = 180/324 (55.56%), Postives = 207/324 (63.89%), Query Frame = 0


Query: 21  HLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYF 80
           +LPPGFRFHPTDEELIT+YLL+KVLD  FS RAIAEVDLNKCEPW+LP +AKMGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 81  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKS 140
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI+S KTC+LVGMKKTLVFY+GRAPKGEKS
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 141 NW---------------------DEWVISRVFQK---------SGTGVGGG----VDGGG 200
           NW                     DEWVISRVFQK         S  G GGG    V  G 
Sbjct: 136 NWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGT 195

Query: 201 GSRKPRFIPGTVS--VYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDSCSYNS 260
           G  K   +P T+S     +PSSPSSVSLPPLLD +       ++    + +   + + ++
Sbjct: 196 GPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTVTASA 255

Query: 261 PREHVSCFS----TTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQE 296
             EHVSCFS    TT     ++ S+    PPPL    DP PRF  +  +S   + RS QE
Sbjct: 256 ITEHVSCFSTVPTTTTALGLDVNSFS-RLPPPLGFDFDPFPRF-VSRNVSTQSNFRSFQE 315

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.4e-62
Identity = 153/307 (49.84%), Postives = 174/307 (56.68%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           +PPGFRFHPTDEELITYYLLKKVLDS+FS  AI++VDLNK EPWELPEKAKMGEKEWYFF
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFF 79

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
           +LRDRKYPTGLRTNRATEAGYWKATGKDREI S KT SL+GMKKTLVFY+GRAPKGEKS 
Sbjct: 80  TLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSC 139

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     DEWV+ +V  KSG            SR+   I      
Sbjct: 140 WVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGV----------VSRETNLI------ 199

Query: 202 YPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDSCSYNSPREHVSCFSTTAGGSF 261
               SS SS        +    AP+  T  +               EHVSCFS  +    
Sbjct: 200 ---SSSSSSAVTGEFSSAGSAIAPIINTFAT---------------EHVSCFSNNSAAHT 259

Query: 262 NIPSYDF-ATPPPLLAAVDPSPRFHRNMGLS-AFPSLRSLQENLQLPFFYSPV----NLP 302
           +   + F   PPP L      PR  R++G   AF     L  + Q+ F  +      NLP
Sbjct: 260 DASFHTFLPAPPPSL-----PPRQPRHVGDGVAFGQFLDLGSSGQIDFDAAAAAFFPNLP 287

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.7e-58
Identity = 124/202 (61.39%), Postives = 138/202 (68.32%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           LPPGFRFHPTDEELIT+YL KKVLD+SFS +AI EVDLNK EPWELP  AKMGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
            +RDRKYPTGLRTNRATEAGYWKATGKD+EIY  K  SLVGMKKTLVFYRGRAPKG+K+N
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     +EWVI RVFQKS           GG + P  I   + +
Sbjct: 136 WVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKS----------AGGKKIP--ISSLIRI 195

Query: 202 YPEPSSPSSVSLPPLLDSSLYS 203
               +  +   LP L DSS Y+
Sbjct: 196 GSLGTDFNPSLLPSLTDSSPYN 203

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 7.9e-58
Identity = 122/202 (60.40%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           LPPGFRFHPTDEELIT+YL KKVLD  FS +AI EVDLNK EPWELP KAK+GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI+  K  SLVGMKKTLVFYRGRAPKG+K+N
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     +EWVI RVF K+           GG + P      +  
Sbjct: 137 WVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKT----------AGGKKIPISTLIRIGS 196

Query: 202 YPEPSSPSSVSLPPLLDSSLYS 203
           Y   S     SLPPL DSS Y+
Sbjct: 197 YGTGS-----SLPPLTDSSPYN 201

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.8e-54
Identity = 100/152 (65.79%), Postives = 114/152 (75.00%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           LPPGFRFHPTDEELIT+YL  K+     SG  I+EVDLN+CEPWELPE AKMGE+EWYF+
Sbjct: 22  LPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFY 81

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
           SLRDRKYPTGLRTNRAT AGYWKATGKD+E++S     LVGMKKTLVFY+GRAP+G K+ 
Sbjct: 82  SLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTK 141

Query: 142 W------------------DEWVISRVFQKSG 156
           W                  +EWVI RVF K+G
Sbjct: 142 WVMHEYRLENDHSHRHTCKEEWVICRVFNKTG 173

[Close]

BLAST of Cp4.1LG06g06610 vs. NCBI nr
Match: XP_023536461.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 695 bits (1794), Expect = 2.57e-252
Identity = 341/362 (94.20%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN
Sbjct: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTGVG 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSGTGVG
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQKSGTGVG 180

Query: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS 240
           GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS
Sbjct: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS 240

Query: 241 CSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300
           CSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ
Sbjct: 241 CSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300

Query: 301 ENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCMW 341
           ENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCMW
Sbjct: 301 ENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCMW 360

[Close]

BLAST of Cp4.1LG06g06610 vs. NCBI nr
Match: XP_022935716.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata])

HSP 1 Score: 673 bits (1736), Expect = 1.85e-243
Identity = 334/364 (91.76%), Postives = 335/364 (92.03%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAV--DHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVD 60
           MDVSSFSR+DSAA   DH HPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVD
Sbjct: 1   MDVSSFSRHDSAAAAADH-HPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVD 60

Query: 61  LNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTC 120
           LNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTC
Sbjct: 61  LNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTC 120

Query: 121 SLVGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTG 180
           SLVGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSGTG
Sbjct: 121 SLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQKSGTG 180

Query: 181 VGGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDR 240
           VGGGVDGGGGSRKPRFIPGTVSVYPEP SPSSVSLPPLLDSSLYSAPVAATAVSGNITDR
Sbjct: 181 VGGGVDGGGGSRKPRFIPGTVSVYPEPGSPSSVSLPPLLDSSLYSAPVAATAVSGNITDR 240

Query: 241 DSCSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRS 300
           DSCSYNSPREHVSCFSTT GGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRS
Sbjct: 241 DSCSYNSPREHVSCFSTTTGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRS 300

Query: 301 LQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDC 341
           LQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADV ACNSAGNW VSDEPRSMNSTELDC
Sbjct: 301 LQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVAACNSAGNWAVSDEPRSMNSTELDC 360

[Close]

BLAST of Cp4.1LG06g06610 vs. NCBI nr
Match: KAG6591937.1 (Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 672 bits (1734), Expect = 3.88e-243
Identity = 335/364 (92.03%), Postives = 335/364 (92.03%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAV-DHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDL 60
           MDVSSFSRYDSAA  DH H HHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDL
Sbjct: 1   MDVSSFSRYDSAAAADHHHHHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDL 60

Query: 61  NKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCS 120
           NKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCS
Sbjct: 61  NKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCS 120

Query: 121 LVGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTGV 180
           LVGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSGTGV
Sbjct: 121 LVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQKSGTGV 180

Query: 181 GGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRD 240
           GGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRD
Sbjct: 181 GGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRD 240

Query: 241 SCSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSL 300
           SCSYNSPREHVSCFSTT GGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSL
Sbjct: 241 SCSYNSPREHVSCFSTTTGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSL 300

Query: 301 QENLQLPFFYSPVNLPSPPPPP-LHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDC 341
           QENLQLPFFYSPVNLPSPPPPP LHHGNMSSSADV ACNSAGNW VSDEPRSMNSTELDC
Sbjct: 301 QENLQLPFFYSPVNLPSPPPPPPLHHGNMSSSADVAACNSAGNWAVSDEPRSMNSTELDC 360

[Close]

BLAST of Cp4.1LG06g06610 vs. NCBI nr
Match: KAG7024810.1 (Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 667 bits (1720), Expect = 5.09e-241
Identity = 330/363 (90.91%), Postives = 333/363 (91.74%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFSRYDSAA    H HHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN
Sbjct: 1   MDVSSFSRYDSAAAADHHHHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTGVG 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSGTGVG
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQKSGTGVG 180

Query: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS 240
           GGVDGGGGSRKP+FIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS
Sbjct: 181 GGVDGGGGSRKPKFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS 240

Query: 241 CSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300
           CSYNSPREHVSCFSTT GGSFNIPSYDF+TPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ
Sbjct: 241 CSYNSPREHVSCFSTTTGGSFNIPSYDFSTPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300

Query: 301 ENLQLPFFYSPVNLPSPPPPP-LHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCM 341
           ENLQLPFFYSPVNLPSPPPPP LHHGNMSSSADV ACNS+GNW VSDEPRSMNSTELDCM
Sbjct: 301 ENLQLPFFYSPVNLPSPPPPPPLHHGNMSSSADVAACNSSGNWAVSDEPRSMNSTELDCM 360

[Close]

BLAST of Cp4.1LG06g06610 vs. NCBI nr
Match: XP_022976535.1 (protein CUP-SHAPED COTYLEDON 2 [Cucurbita maxima])

HSP 1 Score: 666 bits (1718), Expect = 9.89e-241
Identity = 328/362 (90.61%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFSRYDSAA    HPHHLPPGFRFHPTDEELITYYLLKKV+DSSFSGRAIAEVDLN
Sbjct: 1   MDVSSFSRYDSAAAADHHPHHLPPGFRFHPTDEELITYYLLKKVIDSSFSGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTGVG 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQ SGTGVG
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQXSGTGVG 180

Query: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS 240
           GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDR+S
Sbjct: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRES 240

Query: 241 CSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300
            SYNSPREHVSCFSTT GGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ
Sbjct: 241 FSYNSPREHVSCFSTTTGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300

Query: 301 ENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCMW 341
           ENLQLPFFYSPVNLPSPPPPPLHHGN+ SS DVVACNSAGNW VSDEPRSMNSTELDCMW
Sbjct: 301 ENLQLPFFYSPVNLPSPPPPPLHHGNIPSSTDVVACNSAGNWAVSDEPRSMNSTELDCMW 360

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy TrEMBL
Match: A0A6J1F5H7 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC111442545 PE=4 SV=1)

HSP 1 Score: 673 bits (1736), Expect = 8.97e-244
Identity = 334/364 (91.76%), Postives = 335/364 (92.03%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAV--DHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVD 60
           MDVSSFSR+DSAA   DH HPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVD
Sbjct: 1   MDVSSFSRHDSAAAAADH-HPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVD 60

Query: 61  LNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTC 120
           LNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTC
Sbjct: 61  LNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTC 120

Query: 121 SLVGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTG 180
           SLVGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSGTG
Sbjct: 121 SLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQKSGTG 180

Query: 181 VGGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDR 240
           VGGGVDGGGGSRKPRFIPGTVSVYPEP SPSSVSLPPLLDSSLYSAPVAATAVSGNITDR
Sbjct: 181 VGGGVDGGGGSRKPRFIPGTVSVYPEPGSPSSVSLPPLLDSSLYSAPVAATAVSGNITDR 240

Query: 241 DSCSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRS 300
           DSCSYNSPREHVSCFSTT GGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRS
Sbjct: 241 DSCSYNSPREHVSCFSTTTGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRS 300

Query: 301 LQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDC 341
           LQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADV ACNSAGNW VSDEPRSMNSTELDC
Sbjct: 301 LQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVAACNSAGNWAVSDEPRSMNSTELDC 360

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy TrEMBL
Match: A0A6J1IJR8 (protein CUP-SHAPED COTYLEDON 2 OS=Cucurbita maxima OX=3661 GN=LOC111476901 PE=4 SV=1)

HSP 1 Score: 666 bits (1718), Expect = 4.79e-241
Identity = 328/362 (90.61%), Postives = 331/362 (91.44%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFSRYDSAA    HPHHLPPGFRFHPTDEELITYYLLKKV+DSSFSGRAIAEVDLN
Sbjct: 1   MDVSSFSRYDSAAAADHHPHHLPPGFRFHPTDEELITYYLLKKVIDSSFSGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTGVG 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQ SGTGVG
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSTNSKDEWVISRVFQXSGTGVG 180

Query: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDS 240
           GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDR+S
Sbjct: 181 GGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRES 240

Query: 241 CSYNSPREHVSCFSTTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300
            SYNSPREHVSCFSTT GGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ
Sbjct: 241 FSYNSPREHVSCFSTTTGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQ 300

Query: 301 ENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTELDCMW 341
           ENLQLPFFYSPVNLPSPPPPPLHHGN+ SS DVVACNSAGNW VSDEPRSMNSTELDCMW
Sbjct: 301 ENLQLPFFYSPVNLPSPPPPPLHHGNIPSSTDVVACNSAGNWAVSDEPRSMNSTELDCMW 360

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy TrEMBL
Match: A0A0A0L3C7 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G629480 PE=4 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 2.73e-205
Identity = 295/366 (80.60%), Postives = 312/366 (85.25%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFS YDSAA D+ + HHLPPGFRFHPTDEELITYYLLKKVLD++F+GRAIAEVDLN
Sbjct: 1   MDVSSFSHYDSAASDNSN-HHLPPGFRFHPTDEELITYYLLKKVLDTNFTGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTGVG 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSG+G G
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSGSSKDEWVISRVFQKSGSGCG 180

Query: 181 GGVDGGGGS-RKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRD 240
           G     GGS +K RFIPG+++VYPEPSSPSSVSLPPLLDSSLYSAP   TA SGNITDRD
Sbjct: 181 GATSSNGGSSKKARFIPGSINVYPEPSSPSSVSLPPLLDSSLYSAPATGTAASGNITDRD 240

Query: 241 SCSYNSP--REHVSCFSTT-AGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSL 300
           SCSYNSP  REHVSCFSTT AGGSFN+P+YDFATP PLLAA DPSPRFHRN+GLSAFPSL
Sbjct: 241 SCSYNSPTAREHVSCFSTTTAGGSFNMPNYDFATPSPLLAA-DPSPRFHRNIGLSAFPSL 300

Query: 301 RSLQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTEL 341
           RSLQENLQLPFFYSPVNL SPP P L++GN     DV  C+S GNWGVSDEP+ MNSTEL
Sbjct: 301 RSLQENLQLPFFYSPVNLCSPPVPVLNNGN-----DVAGCSSGGNWGVSDEPKVMNSTEL 359

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy TrEMBL
Match: A0A5D3DXA0 (Protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001590 PE=4 SV=1)

HSP 1 Score: 570 bits (1470), Expect = 2.60e-203
Identity = 295/366 (80.60%), Postives = 312/366 (85.25%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFS YDSAA +    HHLPPGFRFHPTDEELITYYLLKKVLD++F+GRAIAEVDLN
Sbjct: 1   MDVSSFSYYDSAADNT--NHHLPPGFRFHPTDEELITYYLLKKVLDTNFTGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTG-V 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSG+G V
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSGSSKDEWVISRVFQKSGSGCV 180

Query: 181 GGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRD 240
           G     GGGS+K RFIPG+++V+PEPSSPSSVSLPPLLDSSLYSAP   TA SGNITDRD
Sbjct: 181 GATSSNGGGSKKARFIPGSINVHPEPSSPSSVSLPPLLDSSLYSAPATGTAASGNITDRD 240

Query: 241 SCSYNSP--REHVSCFSTT-AGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSL 300
           SCSYNSP  REHVSCFSTT AGGSFNIPSYDFATP PLLAA DPSPRFHRN+GLSAFPSL
Sbjct: 241 SCSYNSPTAREHVSCFSTTTAGGSFNIPSYDFATPSPLLAA-DPSPRFHRNIGLSAFPSL 300

Query: 301 RSLQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTEL 341
           RSLQENLQLPFFYSPVNL SPP P L++GN     DV AC+S GNWGV+DEP+ M+STEL
Sbjct: 301 RSLQENLQLPFFYSPVNLCSPPVPALNNGNN----DVAACSSGGNWGVADEPKVMSSTEL 359

[Close]

BLAST of Cp4.1LG06g06610 vs. ExPASy TrEMBL
Match: A0A1S3CJV4 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103501784 PE=4 SV=1)

HSP 1 Score: 570 bits (1470), Expect = 2.60e-203
Identity = 295/366 (80.60%), Postives = 312/366 (85.25%), Query Frame = 0


Query: 1   MDVSSFSRYDSAAVDHPHPHHLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLN 60
           MDVSSFS YDSAA +    HHLPPGFRFHPTDEELITYYLLKKVLD++F+GRAIAEVDLN
Sbjct: 1   MDVSSFSYYDSAADNT--NHHLPPGFRFHPTDEELITYYLLKKVLDTNFTGRAIAEVDLN 60

Query: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120
           KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL
Sbjct: 61  KCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSL 120

Query: 121 VGMKKTLVFYRGRAPKGEKSNW---------------------DEWVISRVFQKSGTG-V 180
           VGMKKTLVFYRGRAPKGEKSNW                     DEWVISRVFQKSG+G V
Sbjct: 121 VGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSGSSKDEWVISRVFQKSGSGCV 180

Query: 181 GGGVDGGGGSRKPRFIPGTVSVYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRD 240
           G     GGGS+K RFIPG+++V+PEPSSPSSVSLPPLLDSSLYSAP   TA SGNITDRD
Sbjct: 181 GATSSNGGGSKKARFIPGSINVHPEPSSPSSVSLPPLLDSSLYSAPATGTAASGNITDRD 240

Query: 241 SCSYNSP--REHVSCFSTT-AGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSL 300
           SCSYNSP  REHVSCFSTT AGGSFNIPSYDFATP PLLAA DPSPRFHRN+GLSAFPSL
Sbjct: 241 SCSYNSPTAREHVSCFSTTTAGGSFNIPSYDFATPSPLLAA-DPSPRFHRNIGLSAFPSL 300

Query: 301 RSLQENLQLPFFYSPVNLPSPPPPPLHHGNMSSSADVVACNSAGNWGVSDEPRSMNSTEL 341
           RSLQENLQLPFFYSPVNL SPP P L++GN     DV AC+S GNWGV+DEP+ M+STEL
Sbjct: 301 RSLQENLQLPFFYSPVNLCSPPVPALNNGNN----DVAACSSGGNWGVADEPKVMSSTEL 359

[Close]

BLAST of Cp4.1LG06g06610 vs. TAIR 10
Match: AT5G53950.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 305.1 bits (780), Expect = 7.2e-83
Identity = 180/324 (55.56%), Postives = 207/324 (63.89%), Query Frame = 0


Query: 21  HLPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYF 80
           +LPPGFRFHPTDEELIT+YLL+KVLD  FS RAIAEVDLNKCEPW+LP +AKMGEKEWYF
Sbjct: 16  YLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 75

Query: 81  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKS 140
           FSLRDRKYPTGLRTNRATEAGYWKATGKDREI+S KTC+LVGMKKTLVFY+GRAPKGEKS
Sbjct: 76  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 135

Query: 141 NW---------------------DEWVISRVFQK---------SGTGVGGG----VDGGG 200
           NW                     DEWVISRVFQK         S  G GGG    V  G 
Sbjct: 136 NWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGT 195

Query: 201 GSRKPRFIPGTVS--VYPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDSCSYNS 260
           G  K   +P T+S     +PSSPSSVSLPPLLD +       ++    + +   + + ++
Sbjct: 196 GPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTVTASA 255

Query: 261 PREHVSCFS----TTAGGSFNIPSYDFATPPPLLAAVDPSPRFHRNMGLSAFPSLRSLQE 296
             EHVSCFS    TT     ++ S+    PPPL    DP PRF  +  +S   + RS QE
Sbjct: 256 ITEHVSCFSTVPTTTTALGLDVNSFS-RLPPPLGFDFDPFPRF-VSRNVSTQSNFRSFQE 315

[Close]

BLAST of Cp4.1LG06g06610 vs. TAIR 10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.7e-63
Identity = 153/307 (49.84%), Postives = 174/307 (56.68%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           +PPGFRFHPTDEELITYYLLKKVLDS+FS  AI++VDLNK EPWELPEKAKMGEKEWYFF
Sbjct: 20  MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFF 79

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
           +LRDRKYPTGLRTNRATEAGYWKATGKDREI S KT SL+GMKKTLVFY+GRAPKGEKS 
Sbjct: 80  TLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSC 139

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     DEWV+ +V  KSG            SR+   I      
Sbjct: 140 WVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGV----------VSRETNLI------ 199

Query: 202 YPEPSSPSSVSLPPLLDSSLYSAPVAATAVSGNITDRDSCSYNSPREHVSCFSTTAGGSF 261
               SS SS        +    AP+  T  +               EHVSCFS  +    
Sbjct: 200 ---SSSSSSAVTGEFSSAGSAIAPIINTFAT---------------EHVSCFSNNSAAHT 259

Query: 262 NIPSYDF-ATPPPLLAAVDPSPRFHRNMGLS-AFPSLRSLQENLQLPFFYSPV----NLP 302
           +   + F   PPP L      PR  R++G   AF     L  + Q+ F  +      NLP
Sbjct: 260 DASFHTFLPAPPPSL-----PPRQPRHVGDGVAFGQFLDLGSSGQIDFDAAAAAFFPNLP 287

[Close]

BLAST of Cp4.1LG06g06610 vs. TAIR 10
Match: AT5G61430.1 (NAC domain containing protein 100 )

HSP 1 Score: 227.3 bits (578), Expect = 1.9e-59
Identity = 124/202 (61.39%), Postives = 138/202 (68.32%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           LPPGFRFHPTDEELIT+YL KKVLD+SFS +AI EVDLNK EPWELP  AKMGEKEWYFF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMGEKEWYFF 75

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
            +RDRKYPTGLRTNRATEAGYWKATGKD+EIY  K  SLVGMKKTLVFYRGRAPKG+K+N
Sbjct: 76  CVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRAPKGQKTN 135

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     +EWVI RVFQKS           GG + P  I   + +
Sbjct: 136 WVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKS----------AGGKKIP--ISSLIRI 195

Query: 202 YPEPSSPSSVSLPPLLDSSLYS 203
               +  +   LP L DSS Y+
Sbjct: 196 GSLGTDFNPSLLPSLTDSSPYN 203

[Close]

BLAST of Cp4.1LG06g06610 vs. TAIR 10
Match: AT5G07680.1 (NAC domain containing protein 80 )

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-59
Identity = 122/202 (60.40%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           LPPGFRFHPTDEELIT+YL KKVLD  FS +AI EVDLNK EPWELP KAK+GEKEWYFF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 76

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI+  K  SLVGMKKTLVFYRGRAPKG+K+N
Sbjct: 77  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 136

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     +EWVI RVF K+           GG + P      +  
Sbjct: 137 WVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKT----------AGGKKIPISTLIRIGS 196

Query: 202 YPEPSSPSSVSLPPLLDSSLYS 203
           Y   S     SLPPL DSS Y+
Sbjct: 197 YGTGS-----SLPPLTDSSPYN 201

[Close]

BLAST of Cp4.1LG06g06610 vs. TAIR 10
Match: AT5G07680.2 (NAC domain containing protein 80 )

HSP 1 Score: 225.7 bits (574), Expect = 5.6e-59
Identity = 122/202 (60.40%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 22  LPPGFRFHPTDEELITYYLLKKVLDSSFSGRAIAEVDLNKCEPWELPEKAKMGEKEWYFF 81
           LPPGFRFHPTDEELIT+YL KKVLD  FS +AI EVDLNK EPWELP KAK+GEKEWYFF
Sbjct: 3   LPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFF 62

Query: 82  SLRDRKYPTGLRTNRATEAGYWKATGKDREIYSVKTCSLVGMKKTLVFYRGRAPKGEKSN 141
            +RDRKYPTGLRTNRAT+AGYWKATGKD+EI+  K  SLVGMKKTLVFYRGRAPKG+K+N
Sbjct: 63  CVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRAPKGQKTN 122

Query: 142 W---------------------DEWVISRVFQKSGTGVGGGVDGGGGSRKPRFIPGTVSV 201
           W                     +EWVI RVF K+           GG + P      +  
Sbjct: 123 WVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKT----------AGGKKIPISTLIRIGS 182

Query: 202 YPEPSSPSSVSLPPLLDSSLYS 203
           Y   S     SLPPL DSS Y+
Sbjct: 183 YGTGS-----SLPPLTDSSPYN 187

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g06610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04017	1.0e-81	55.56	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
Q9FRV4	2.4e-62	49.84	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
Q9FLJ2	2.7e-58	61.39	NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2...	[more]
Q9FLR3	7.9e-58	60.40	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]
Q9S851	1.8e-54	65.79	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV...	[more]

BLAST of Cp4.1LG06g06610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536461.1	2.57e-252	94.20	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022935716.1	1.85e-243	91.76	protein CUP-SHAPED COTYLEDON 2-like [Cucurbita moschata]	[more]
KAG6591937.1	3.88e-243	92.03	Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024810.1	5.09e-241	90.91	Protein CUP-SHAPED COTYLEDON 2, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022976535.1	9.89e-241	90.61	protein CUP-SHAPED COTYLEDON 2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG06g06610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5H7	8.97e-244	91.76	protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita moschata OX=3662 GN=LOC11144254...	[more]
A0A6J1IJR8	4.79e-241	90.61	protein CUP-SHAPED COTYLEDON 2 OS=Cucurbita maxima OX=3661 GN=LOC111476901 PE=4 ...	[more]
A0A0A0L3C7	2.73e-205	80.60	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G629480 PE=4 SV...	[more]
A0A5D3DXA0	2.60e-203	80.60	Protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CJV4	2.60e-203	80.60	protein CUP-SHAPED COTYLEDON 2-like OS=Cucumis melo OX=3656 GN=LOC103501784 PE=4...	[more]

BLAST of Cp4.1LG06g06610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53950.1	7.2e-83	55.56	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15170.1	1.7e-63	49.84	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G61430.1	1.9e-59	61.39	NAC domain containing protein 100	[more]
AT5G07680.1	5.6e-59	60.40	NAC domain containing protein 80	[more]
AT5G07680.2	5.6e-59	60.40	NAC domain containing protein 80	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 23..147 e-value: 4.6E-35 score: 121.3
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 22..181 score: 46.711384
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 31..156 e-value: 6.8E-46 score: 157.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 19..153
None	No IPR available	PANTHER	PTHR31744:SF131	PROTEIN CUP-SHAPED COTYLEDON 2-LIKE	coord: 13..142
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 13..142
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 143..334
None	No IPR available	PANTHER	PTHR31744:SF131	PROTEIN CUP-SHAPED COTYLEDON 2-LIKE	coord: 143..334

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g06610.1	Cp4.1LG06g06610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding