Cp4.1LG06g06570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG06g06570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionrab3 GTPase-activating protein non-catalytic subunit
LocationCp4.1LG06: 4070153 .. 4080852 (-)
RNA-Seq ExpressionCp4.1LG06g06570
SyntenyCp4.1LG06g06570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATCTCCAGAATTGGCTAATGATCGACTGAGAGGCTCGCCATTCAACACAATGGTTGGAAGTCGATCAATATCCCAACCAAAAACCCTGCATACGGCCTGTCCAAAAGCCCTATGAGCCACCTTCTTCTTCGTTCTAGATATCGAATTCGAATGATGAACAAGCCCAATGCAGTTCTTAAACCTTTTCCCAGATTTCTTCTTCCCCATTCCATCACAAACCAAGCAACAAAACAACCCATCTTCAGAATTCTTCTCGTAATAGCCCCTAAGTTCATCATTCTCCATAAACAGATTCAAAAAGAATTTGTACTCTTCACTTTCCATAATCTCCCCATCATTCCCCTCTTCCTCCTCCACCTCTTCATCACTCCCTGAATCGGCATTTCTAATGAGAAATCTCCGGCAAGCCTCGATACCCTTGTACTGCAATTGCAACGCCACACGATTTGCTCGCTCTTCAGACGACACCAGCCGAGCCGCCGGAGTAGCACAGGGCATTGGCGGCCACCCAGATGACGTCGAGGGCTGATTTTGCACTGGCTCCGGGCAGGGCCATTCGGGGCCGGTGTCTTGTAATGGCTCGAGGCGTGGCTTCTTCTTCTTTTGCTTTCGATTCTTTGTGTCTCTGGGTCTCTTATTCGTAGCAGCGGCGACGGCGGTGGATAAATAATAGCGAGTGGGCTTAGGGCCCCTCGGCGGACCTCGCCGCCACAGAGAGTGAAGATAGAGAACCTCTTCGGTGAGTCTTTCCTCGGAGTAGGGATTCATTGGTGGAAAGATGACGGAATCAAGAGTAATGGAGGTTGGGGATCATCGCTCTTGTCTCATCCTCTCCGATCATAAATCACAAATAGGCGCTTATGATTTATGTGCTCTCTCTCTCTCTCTCTATATATATCTCTCTCTCTCTCTATATATATCTCTCTCTCTCTATATATATCTCTCTCTCTCTATATATATCTCTCTCTCTCTATATATATATATCTCAATTAGAATTTAGAAGGGGAATTTCGTCGCTCGTCGTCTTCTACCTTGTGCGTTCTACCCTCGTCCGTACGCTGATCGGCTCCACAGTCCGTACCAGTCATATGACCTACTGTAACAACCACATACTTTCTTCCCTTCTTCAAATTCCCAACTCCCCACTGAGCCATTTCTCTCGTTTCTCTTCTCACAGTCGCCGTATTTTCTTTCAAGGTTCATCAATGTCTACATCTGCTGTAAAAATTGTTGCCGAGTACGCCAAGTCGAATCGTTCTACATGCAAGAACTGCTCCAAAACCATTCCTGCAAAGGCACTGAGGTTGGGTTTTGTGAGCAGAGATGGGCGGGGATTCGACATGACCCGTTGGTTTCATTCTGATTGCGCTTCTTTTGGTTCCGACCCTGTTTCTTCCGCCGACAAGATTAATGGGTTCGCGCTCTTGAAGGCATGTTCGAATACAAAACTTCAGTAGTGTCTGTTTTCGATTCTTTGAAATGGGGAAACGTTGACTGTTCATCCAGGGAAAGAGATGTTGTTTTTTACAGGGTTCGCTACCTGTTTGATAAAATGCTTCTAAGATTCAAACTGTGTTCATTCTATCTGCTTGGTTTTGTTTGCTTTTCTTTACAGGGGGATGACCAGGAAGCTCTGAAGAAATTAGTTAGCAGAAGCCATGAATCTAAGGTGACTGTTATGCCCATCAGTTCCAGTTTGGGTCTGGATTGATCTAATGTTAGGTTTTCATGAATTGGGTGTCATTTGAGCGATCATTATGCATTGTTTGGTTGAATATTTTCTTTGATTCAATGGTTTATGTGTCTATAATCTTCTCATTTTGGCTACTCAATGCACCTTCAATAAACAGGTCCGCAAAAGGGATGAGGATGAAGAAGATGGCATTGAAGAAAGAGATCAAAAGAAAGTCGAGGTATGCATCTGGAAACTGATGCCCTTTGTAGAGTACTGAACAATGTGACATGCTGCTATAGATTTCTAGTTGTAGCAACCGTTGAAATCATTTTTCTGAGTTCATATCCATTTGAAGTCATACTTTCTTGATATCCATCTAAAACTGAAAGAAATAATTTGGTTTAGCTACTGAGTTGGAAAGTGGAATGGAATCCGTTGAATAAAGCCTCTGCAATTGTAACATCTCGAGACCACCGCTAGTAGATATTATCCGCTTTGGCCCATTACGTATCGCCGTCAGTCTCACGGTTTTAAAACACGTCTACTAGAGAGAGATTTCCACATCCTTGTAAGGAATGTTTCGTTCCCCTTCCCAATTGATGTGGGATCTCGAAATCCACCCCCCTTGGGGGCCCAGCATCCTCGCTGGCACACCGCTCAATGTCTTGCTCTGATACCAATTTGTAACAACCCGAGACCATTGCTAGTAGATATTGTCCACTTTGGCCCGTTACGTAGCACCGGCAGCCTCACGGTTTTAAAATGCGTTTACTAGGTAGAGATTTCCACACCTTTGTAAGAAATGTTTCGTTCCCCTCCCAATCGATGTGGGATCTCACAATCCACCCCCCTTGGGAACCCAGTGTCCTCGCTGGCACACCGTTCAATGTCTGGCTTTGATATCAATCTGTAATAACCCGAGACCACCGCTAGTAGATATTGTCAGCTTTGGTCCATTACATATTACCGTCAGCCTCACGGTTTTAAAACGCGTCTACTAAGGAGAGATTTCCACACCCTTGTAAGTAACGTTTCGTGATTGCCTTATAATCTGGATTTTGAATTGGTTTTCTTAACTCGTTAACTTCGCTCAAATCTTCATCCTATATGATTTCCTTGCTTATTCTGGCTGCAGCACTTGCTTTCTTGTTTATTGTCTCTAGATATCTGTTCTATGCTCTCTCTTATCTTCCCCATTTTGTACTTCCTTATTCTTTAATGATTCTATAGCTCTGTTCTACATGTTTACTAGCAAAAGTGTAAAGCTATCTAATATAATACCTTTATTTTTTATCAATTCTATTATTTGCAGTTGTCTGCCTCTAGTTTGCTGCCAAAGTTAGACCTTGTCCTTACAGCTTCCAACATAAAGACCAAGTATAAGGTAGGATCCAATTACTGTTTCATTCTCATTACTAGCTGCCTTTGTCCCTTTTCCTTTACTGAAATGGATTTGTTAGCTACATGAACTCACTTGAGCATAGCTAGTTTAGGGGCCCCGACGACATTTCCTTTTAAGCTGTGGCGTCGGGGACATTATTTTGCTCTTACGTAGTCCTAAGCATGATGCATACATAACTAAGCTGTTGAATGATTCAGGACGCTACACTTTTACCTAAATGGAAGGCATTCCAGACACTCATCTTTCTTGAGCAGGTAAAAAGTAAATTATTATAAGCCACCATGTTGATTCTGATCGATCAACATGAACACTCATGAATGAAAATTTAATCGAATCTTTATTTCTTCTGGTGAAACTCTCTGGATTTGTTTCAATTTATTTGTTTTTTCAGGATGATGGGTTACATCATTCAAGTAAAATAGCTGCATTTGATTTTGATGGCTGTCTAGCAAACACATCTGTCAAAAGGTAAGGCTTTTTCTGATGCAGAAGTTTGAAAGGTTTGGTTATAGGTCAGAAGCATTTTTTTTCTTAGAAAGTAAACACTTGCCAAGTTTTTTCGATAACATTATCCTTGCGATTGGGGCGTTTTAATTTCAGAGTAGGTGCTGAGGCGTGGTCTCTGATGTACCCTTCCATACCACAAAAACTCCAGAGCTTGTATAATGAAGGCTACAAGCTGGTTGGTCAATCTTCCTCCATGAATCATGCTTAATGGCTCTCGAAAATATTATTCATTACTATAACTATTAAGCAGGTAGTATTTACGAACGAATCCAACATTGAGAGATGGAAGAACAAGAGACAGGTCGCTGTGGACTCCAAACTTGGGCGTCTCGATAGTTTTATTAGTCGAGTCAATGTCCCAGTTCAGGTAAATACCAGACCAGACTCACCAGAAGACACATTGCAATTGCAGCCATGTTGAATTGTGAGTGTATGGTGTTGTTTTGTTGCCTGTGGATGCAGGTGTTTGTTGCCTGTGGAATTGGAGGCGGATCGGGTAAATCCGAAGAGGATCCCTTCAGGAAACCAAAACCTGGGATGTGGCAGATCATGGAGAACCACTTCAATGGCGGCATCCCCATTAATCTAGACCAGTTATTTCTCTCACTCTCCCTCATTATCTTTCATTTGGAAGAAGATTTGATATTTTAACTAATGAACTATGCCTATGTTGTTCATCCTGGTTCCTGGTTCCTGTTGACAGATGTTTTTACGTGGGGGATGCAGCTGGGAGAGCTAAGGATCACAGTGATGCTGATCTCAGATTTGCCCAGGTACTACTAATTTCTCATACTAACAGCAATAACATAGCTCAGGCCAACATCTTGAATCTGTTTTATTGCCATTTTGCAGGTCATTGGGTTGAAGTTTTATGTTCCTGAAGAATTTTTTGTTGAGGAATAATTTAATTTACCTTTCACCAGCCTAGAACAAGAAGAAAACTGTGTAGTAGCAATAGCTTTGTAATGAATTACTTCAGTGGAGCATTGTGAATTCAGGCACATCTTTTAGAACTAAATTTTACAAACCTATGACTCTTGTATTCTATTCTGAAAATGAATGCAATGAGATGAGATCATACCCCGATTTCACCTTCCAAAATGGCATGCCTTGTCAATACAATTTCCTTCACAAGGTTTCTGTAAGTGAAAGGCCTGACTGTAGATCTCAAGAACAGCTCTGGAGGAATTTGGCTTTTCTTTATCTTCTTCCTCCATGGCCCATACCCTATACGTTCCCATTCTTCTGGTTTCACTTTTGCTCTCTTCCCTCTCAATTCTGTCTCATCCCCATCTTCTTCCATGGCCTTCCTACTTCCCGCATTCCGCCCCTTCTGCTTCTCGTAAAATTCATCACTCGCTTCTTCACTGCGTTTCAACAGCTTCTCCAGTTCTTCTGGACTACTTATCGCCTTCCTGAACCGTTCATCCCAATAATCCTCATCTTCTTCCTCGTTTTGATGCTCTCCTCCATCTTCCTCGTCCTCCGCTTCTTCGTTTGTCTCCATCACCACATCCTCGGCCTCATCTTCATAGTCATGGTCATTGTCATCATCAGTCTCAATCCACTCCATGATCACATTTTCGTCACTGGGTCGATTCTCGCTGTCGTCGTCCGGGGCATCACAGCCCAACTCCTCCTCCTCCAACTTAGCTTTCCACTCTTTTGTATATGGATGCAGCAGTGGAACAGGGTGGTTAGTCAAAAGAAACTCTAAACACTTGGATTTCTTCTCATCACTCAGCTTCTCATATGCATTTGCAACATCATCCACAAATGCCTTTGGATTTACCCTCAAAATCTTACACAGCCCACCAAAATATGTCACCCATTCAACATTTCCTTCATCATCCTGCAACTCAAACAGAACATCTTGCTCTGTTTTGGGATCGAGAAATGGCATTAACGCCTGGAAAAACTCTGCCTGAGGCTCAAATCTGCATTGGTAAACAGGCTTTTTCACATATATGATATCAGGTCTCATCCATGCTGCACATTGAGTTATATTCTTTCTTGACTTATTTCCAAGCCGACCCATCAAGCTCCATTTGTCCAACCTTTCTTCTTTACCAGCTTCAAGCACAACCTCTGCAATCAAAGTCCACTGCTGCCATGGCAGCTCCGAAATCCTCCACCGTGGGTGCCTCACGAACACCCAAAAGTGCTGAAACCCTTTGCTCCTGTCCATTCGCTGCAATCCCTCGCTGAAATCAGAAGCCATTTCTGATTGCTCGATCTTCTCCCACTCCTCGTGATCCTTAACCTCGCGGATCATCGTAACTCGCTCGTCCGTAAACCGACCACGAATAGGCTCCCCGATGACGACTCCACGCCACGAATACGGACCGAACTCGCCGTACTTGTACCAGTCATGGGGATGCCGCAGATTCGGGTCGTCTTTCTCCATGAATCGAACCATCCGATCGTAGCCAAGGCCAATCTGCTGAAGCTCATCCTCACTAAAGTTATCCGCATAGTTACTGTTCGAGTTCTTACGGCGGTAGAAATGGGACTCGGCAGGCTTCTGGCTCTTCCGACGGACATTGTTCCTCAACTTCCGCCGGAACTCAGCGTTGCCTTCTATCCGGCCGGGAGAAGGCCCTCCACCCTTCTTCTTGCTCCGGCCGGCGCATGTACGAATGTCTGGACGGGAGTTTGCAAATGGAAACTGCGAAATTTGGCGAAAGATCGGAAGAACAGAAGCATTTGGAAGACCGGATATAATGGTGAGTGGCTTACGGGTTTTATGGGATTTTAGGGTTAGGGTTTGAAGAAGAGGATTGGAGAATGGTGTGAGGGAGGTGGAGGGGAGGAATGGCGATGAAGGGTTTAGGGTTTTACAGAGAGGGAACTGTGAAGTGGCCATTTTCACAGTTTTGGAAACATTGAAAACAGAGCAAAGAAGATAACGTTGATGTGTATTTATTTACAACATTTTTTAATTAATTTTCCAAAATAAATGATAACGATAATTGAGTTCTAATTTCTTATTATTTCGCGGCATCTTATATGAGCCCTAGCTCAGTTTCAATTTCATCGCCATTAAAGCAAAGGATTCAAGGTTTTTTCTTCCCGGCAATGGCGAGACGACCCTACACCACGGTGTTGGGCTGCATAACTTGCGAGGAGCTCGATGATTTTGGCGCTGGGAAGGAAGGCTGGCTCGTCGACAACCCTAATCTTATATGCGCCCTCGATTCGCACTTTCTGGCGCTGGCCAATCGATCTATCATCCTTGTTCTTGGTTGGGCGGGTTCCGATGGATATAAGGTGAAGATCAGGCCTTCTGATTTGTCTCCGATCAAAGCGGAGTACATCTCCGCTTTAGAATGGTTGGTGTTCGATGAATTTAAGGTGCTTTTGGTCGGGACTTCTTGTGGGTATTTGCTGATTTACTCCTCAAATGGGGATTTGATTCTCAAGCAGGTAGTCCCTTTTCATCATCGCGCGATCACTGTTCTTAAATCTATGACAAAAAAATCAAAATCTGGTTTCTATCAACAGAGATGTTTGACTAAGAAAGCATTATCGTTTAGCTTATAGGTTTTGTATGATCTTTCACCTGGGAAGATGCTGGTGGAATGGTAGATGTTCTTATTTATTTGATCAATGTTTTCGTAGTTTAGAATCCAGATGCCAATATGATTGTTGGCGTTCATATCTTCAAGATTTCACAAAATTTGCAATTTCCTGACATCATTTGAGGAATGTATTATGAACTTGATTTTCTTGGACACCGAATATGGCTCCAATTTTTCATTGCTGATGGATTTTATTGCTAATTTGTGGGTTTTTAGATGATCCATCCTGGAAGAATTCTAAAGATTAGGGTTCATGGTTCGAAGAGAGATTCATCCCATGAATCTTTGTTCGAGGAGGTTTCGGTTGCTATGCCCGGTGTAATTGCTCGCATTGAAGCATCTGATATTCAGGTTCTTGCTACCTTCCTTAATTACTAATAGCGTAGCTTTAGATTCTTGTGTTGTTGAGATAATCGTTCATAACCTCTGTGCTCTACAGCCAGATATGTTCTTCATCATAACCTCTGTGCTTCAACTTAAGGAAACATTGCCTCTGCCTTTATGGATCTTGATATGTTTTGGACTAGTATAACATAGCCTGACACATGCTTTGGTCACAGAACACACTGCAAAAATGGTTTGAAGAATCGAAGGCACGTTTTCGGGATCCAAAATCAGACAGTCGAGATACGGAGGATTCTGGAAATTCTTTTGAAAAGTTAGCCTATCAAGTATGGAATGTCAGCAAATACGGTTCTTGTGCCGATGCAGCAATCGTCGGTGTTATGCCTCCGCCATTGATGGAACTCCAGGTAAAAGAATGGCCTCGTTATTTCATGGGAAAAACTAGGAGACTGTTTCTAGGAGCAGTGCTTATGTCGTGGAAGCTCTCTGAAATTATTCTGGTATTTGAATTCAGCTGCTTTTATTGTTGGGCAGTCGAGTGAACGTTATTTTTGTGCAGTCACTGTTGGAAAGGATGCTGTAATTTCAGCATTCAGGTCAGTTTGTCTGGTTTTTTGCTATTTATGATTCTGAAGTTATTGTGTACAATGACATTATTGTTACATTTTGTATACTTTGTGGTGGCATCATGTAAAAAGACTGTCTGAAGACAAGAGCAGGTCTTTAGTTGGAGCCATTTTATCAAAAGTTGTCCCTGCAACATTTTCAACAATAGCTTCGTTTTCGAAAGTGATTTGGCGAAGAGAACCAAAAACATCTAAAAAGCCAGATGCGAAGGGTCAAGATTTTGCTCGAGGTGCGTGTTGATTCTAGTAATTGATCATTATAATGCATGCTTACTAACTATCGATTTCCTAAGATTCTATGACTCGTTTCGCTCGAATTATTTTTTCAAGCAAGCTTGACGTACAAAGATATTAAATTATGTATTTGTGATTGTGAACTGTGAGATCTCGCATCAGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTAGAAACCTCTCTCTAGTAGACGTGTTTTAAAATCTTGAGGCTGAGGGCAATACGTAATGGGCCAAAGCTGATAATATTTGCTAGCGGTGGGGTTGGGTTGTTACAAATGGTATTAGAACTAGTCATTGGGTGTGTGCCAGCGAGGACGCTGGCCCCGAGGGGGTTGGGTTGTTACAAATGGTATCAGAACTAGTCATTGGGTGTGTGCCAGCGAGGACGCTGGGCCCCGAGGGGGGTGGATTGTGAGATCTTATATCGGTTGGAGAGAGGAATGAAACATTTCTTATAAGAGTGTGGAAAGCTCTCTCTAGCAGATGCGTTTTAAAATCGTGAGGCTGACGGCGATACGTAACGGGCCAAAGAGAAGTTAAATACTTAGTTTATCATACAATATTGGTTTAAAGGTTTATTATGAGCATTTTTAGTTCAAATGCGGTATTTGTTATTGTTGGTAACTTCTGCTCATTACGGTTTTCTTTCTCCTTCTTTATCTTTATGAGTCCTGTGCTTAGTATTGAGTTCATGCCACTGTTAGATACATGATGCTCGAGTGTTCTAACAGCTACGCATCAGCTATTGCACAATTTTTACAAAAATTTTAGGAACTTCTTGGCATCATGATTGCTGCAGCCTCTTCTTTGACGTGCTTGAAGGACCATCCAAGGAAGGGTGAGAAACTGACTTTGTCTCCAAGCGGTACGTTGGCAGCAGTTACGGATTCACTGGGTCGAATATTGCTCCTGGACACGCAAGCTCTTGTCGTGGTTCGGCTATGGAAGGTCATCCTTTTTATTTTTACTTAGATATATATATCATTTCACAATCTCTGCTCGAACGTTTCAAAGTGAACCCGCGATTAACATTTGGTTCCTCTTTCTCCTGAACAAACTCCTTAAAATGAAATACAGGGATATCGTGATGCTAACTGTCTGTTCATGGAGATGTTGATCAATAGAGATACTGCATCATCAAGTTCTAATTCCATAGAGTATGAACCTGCAAAGAATGATTACTGCTTGTGTTTGGCTATTCATGCACCAAGAAAGGGGATAGTTGAGGTACTTTTTCCACTCGAATTGAGTTTACTCTTTACATCTTCTCAAGTGTTCTTTTGAACGTTCTTGACAGTCATTTTTCGCTTTGTGTGAGATCTCACGTCAGTTGGAGAGGGGGACGAAGCATTCTTTATAAGGGTGTGGACACTTCTCCCTAGTAGATGCGTTTTAAAAACTTGAGGGGAGACCCAAAAGAGAAAAACCCAAAGAGGACAATATCTGCTAGCGGTGAGTTTGGACTCTTACACTTGGAGTCCAAGTCAGACTATGATATAAAAGTTAATACGATTTGCACCATTGGAATATAAAACACAACCTTCTTAGTTCTTAGTGGATAACATTACTTTTAGTGTGAGATCCTACATTAATTGGAGAGATGAACGAGTGCCAGCGAGGACATTGGGGGAGTGGATTGTGAGATCCCATATGGAGAGGCGAACAAGTGCCAACGAGGACGCTAGACCCTGAAGGGGGGTGGGGATTGTGAGATCCCATATCGGTTGGGGAGGAGAACGAAACATTCTTTATAATGATGTGGAAATCCCTTCCTAACAGACATGTTTTAAAAACCTTAAGGGGAAGTTCGAAAGGGAAAGCCCAAAAAGGACCATATCTGCTAGCGGTGGATTTGAGCTATTACATTTAGATTATAGCAGAGACAAACGGACTACCCTCCACACTAGGATTAAAAAAAGATGCTCTTTTTGTTTATAATTCTGCATTTGTGCGAGCATACGAGCAAAAGTTCGTAGATTTAAAGCATAGGCTTAGGGTTCTCCCAAGTGACTGAAAATGATTTGTGTGATCTACGGCAGATATGGCAGATGAGAACAGGTGGTCGACTCCGAACCATTCGATGTGCAACGGGTAGCAAACTACTGCAACCATCCTCCAGGTTTGGATCGTCCATAGCTTCCTCTTATATCCCCTTGGAAGTTTTGTTATTAAATGGAGATTCTGGTCAAATTTCTGTTCTAAACCGAATCCTTTGATGAACTTTGAAACAGATTGAATCATTCATTCTCTCATTTCTTGATACAAAAAAAAAAAAAAAAAAAAAAAATTAAATTAAAT

mRNA sequence

GAAATCTCCAGAATTGGCTAATGATCGACTGAGAGGCTCGCCATTCAACACAATGGTTGGAAGTCGATCAATATCCCAACCAAAAACCCTGCATACGGCCTGTCCAAAAGCCCTATGAGCCACCTTCTTCTTCGTTCTAGATATCGAATTCGAATGATGAACAAGCCCAATGCAGTTCTTAAACCTTTTCCCAGATTTCTTCTTCCCCATTCCATCACAAACCAAGCAACAAAACAACCCATCTTCAGAATTCTTCTCGTAATAGCCCCTAAGTTCATCATTCTCCATAAACAGATTCAAAAAGAATTTGTACTCTTCACTTTCCATAATCTCCCCATCATTCCCCTCTTCCTCCTCCACCTCTTCATCACTCCCTGAATCGGCATTTCTAATGAGAAATCTCCGGCAAGCCTCGATACCCTTGTACTGCAATTGCAACGCCACACGATTTGCTCGCTCTTCAGACGACACCAGCCGAGCCGCCGGAGTAGCACAGGGCATTGGCGGCCACCCAGATGACGTCGAGGGCTGATTTTGCACTGGCTCCGGGCAGGGCCATTCGGGGCCGGTGTCTTGTAATGGCTCGAGGCGTGGCTTCTTCTTCTTTTGCTTTCGATTCTTTGTGTCTCTGGGTCTCTTATTCGTAGCAGCGGCGACGGCGGTGGATAAATAATAGCGAGTGGGCTTAGGGCCCCTCGGCGGACCTCGCCGCCACAGAGAGTGAAGATAGAGAACCTCTTCGGTGAGTCTTTCCTCGGAGTAGGGATTCATTGGTGGAAAGATGACGGAATCAAGAGTAATGGAGGTTGGGGATCATCGCTCTTGTCTCATCCTCTCCGATCATAAATCACAAATAGGCGCTTATGATTTATGTGCTCTCTCTCTCTCTCTCTATATATATCTCTCTCTCTCTCTATATATATCTCTCTCTCTCTATATATATCTCTCTCTCTCTATATATATCTCTCTCTCTCTATATATATATATCTCAATTAGAATTTAGAAGGGGAATTTCGTCGCTCGTCGTCTTCTACCTTGTGCGTTCTACCCTCGTCCGTACGCTGATCGGCTCCACAGTCCGTACCAGTCATATGACCTACTGTTCATCAATGTCTACATCTGCTGTAAAAATTGTTGCCGAGTACGCCAAGTCGAATCGTTCTACATGCAAGAACTGCTCCAAAACCATTCCTGCAAAGGCACTGAGGTTGGGTTTTGTGAGCAGAGATGGGCGGGGATTCGACATGACCCGTTGGTTTCATTCTGATTGCGCTTCTTTTGGTTCCGACCCTGTTTCTTCCGCCGACAAGATTAATGGGTTCGCGCTCTTGAAGGGGGATGACCAGGAAGCTCTGAAGAAATTAGTTAGCAGAAGCCATGAATCTAAGGTCCGCAAAAGGGATGAGGATGAAGAAGATGGCATTGAAGAAAGAGATCAAAAGAAAGTCGAGTTGTCTGCCTCTAGTTTGCTGCCAAAGTTAGACCTTGTCCTTACAGCTTCCAACATAAAGACCAAGTATAAGGACGCTACACTTTTACCTAAATGGAAGGCATTCCAGACACTCATCTTTCTTGAGCAGGATGATGGGTTACATCATTCAAGTAAAATAGCTGCATTTGATTTTGATGGCTGTCTAGCAAACACATCTGTCAAAAGAGTAGGTGCTGAGGCGTGGTCTCTGATGTACCCTTCCATACCACAAAAACTCCAGAGCTTGTATAATGAAGGCTACAAGCTGGTAGTATTTACGAACGAATCCAACATTGAGAGATGGAAGAACAAGAGACAGGTCGCTGTGGACTCCAAACTTGGGCGTCTCGATAGTTTTATTAGTCGAGTCAATGTCCCAGTTCAGGTGTTTGTTGCCTGTGGAATTGGAGGCGGATCGGGTAAATCCGAAGAGGATCCCTTCAGGAAACCAAAACCTGGGATGTGGCAGATCATGGAGAACCACTTCAATGGCGGCATCCCCATTAATCTAGACCAATGTTTTTACGTGGGGGATGCAGCTGGGAGAGCTAAGGATCACAGTGATGCTGATCTCAGATTTGCCCAGGTCATTGGGTTGAAGTTTTATGTTCCTGAAGAATTTTTTGTTGAGGAATAATTTAATTTACCTTTCACCAGCCTAGAACAAGAAGAAAACTGTGTAGTAGCAATAGCTTTGTAATGAATTACTTCAGTGGAGCATTGTGAATTCAGGCACATCTTTTAGAACTAAATTTTACAAACCTATGACTCTTGTATTCTATTCTGAAAATGAATGCAATGAGATGAGATCATACCCCGATTTCACCTTCCAAAATGGCATGCCTTGTCAATACAATTTCCTTCACAAGGTTTCTGTAAGTGAAAGGCCTGACTGTAGATCTCAAGAACAGCTCTGGAGGAATTTGGCTTTTCTTTATCTTCTTCCTCCATGGCCCATACCCTATACGTTCCCATTCTTCTGGTTTCACTTTTGCTCTCTTCCCTCTCAATTCTGTCTCATCCCCATCTTCTTCCATGGCCTTCCTACTTCCCGCATTCCGCCCCTTCTGCTTCTCGTAAAATTCATCACTCGCTTCTTCACTGCGTTTCAACAGCTTCTCCAGTTCTTCTGGACTACTTATCGCCTTCCTGAACCGTTCATCCCAATAATCCTCATCTTCTTCCTCGTTTTGATGCTCTCCTCCATCTTCCTCGTCCTCCGCTTCTTCGTTTGTCTCCATCACCACATCCTCGGCCTCATCTTCATAGTCATGGTCATTGTCATCATCAGTCTCAATCCACTCCATGATCACATTTTCGTCACTGGGTCGATTCTCGCTGTCGTCGTCCGGGGCATCACAGCCCAACTCCTCCTCCTCCAACTTAGCTTTCCACTCTTTTGTATATGGATGCAGCAGTGGAACAGGGTGGTTAGTCAAAAGAAACTCTAAACACTTGGATTTCTTCTCATCACTCAGCTTCTCATATGCATTTGCAACATCATCCACAAATGCCTTTGGATTTACCCTCAAAATCTTACACAGCCCACCAAAATATGTCACCCATTCAACATTTCCTTCATCATCCTGCAACTCAAACAGAACATCTTGCTCTGTTTTGGGATCGAGAAATGGCATTAACGCCTGGAAAAACTCTGCCTGAGGCTCAAATCTGCATTGGTAAACAGGCTTTTTCACATATATGATATCAGGTCTCATCCATGCTGCACATTGAGTTATATTCTTTCTTGACTTATTTCCAAGCCGACCCATCAAGCTCCATTTGTCCAACCTTTCTTCTTTACCAGCTTCAAGCACAACCTCTGCAATCAAAGTCCACTGCTGCCATGGCAGCTCCGAAATCCTCCACCGTGGGTGCCTCACGAACACCCAAAAGTGCTGAAACCCTTTGCTCCTGTCCATTCGCTGCAATCCCTCGCTGAAATCAGAAGCCATTTCTGATTGCTCGATCTTCTCCCACTCCTCGTGATCCTTAACCTCGCGGATCATCGTAACTCGCTCGTCCGTAAACCGACCACGAATAGGCTCCCCGATGACGACTCCACGCCACGAATACGGACCGAACTCGCCGTACTTGTACCAGTCATGGGGATGCCGCAGATTCGGGTCGTCTTTCTCCATGAATCGAACCATCCGATCGTAGCCAAGGCCAATCTGCTGAAGCTCATCCTCACTAAAGTTATCCGCATAGTTACTGTTCGAGTTCTTACGGCGGTAGAAATGGGACTCGGCAGGCTTCTGGCTCTTCCGACGGACATTGTTCCTCAACTTCCGCCGGAACTCAGCGTTGCCTTCTATCCGGCCGGGAGAAGGCCCTCCACCCTTCTTCTTGCTCCGGCCGGCGCATGTACGAATGTCTGGACGGGAGTTTGCAAATGGAAACTGCGAAATTTGGCGAAAGATCGGAAGAACAGAAGCATTTGGAAGACCGGATATAATGTTTCAATTTCATCGCCATTAAAGCAAAGGATTCAAGGTTTTTTCTTCCCGGCAATGGCGAGACGACCCTACACCACGGTGTTGGGCTGCATAACTTGCGAGGAGCTCGATGATTTTGGCGCTGGGAAGGAAGGCTGGCTCGTCGACAACCCTAATCTTATATGCGCCCTCGATTCGCACTTTCTGGCGCTGGCCAATCGATCTATCATCCTTGTTCTTGGTTGGGCGGGTTCCGATGGATATAAGGTGAAGATCAGGCCTTCTGATTTGTCTCCGATCAAAGCGGAGTACATCTCCGCTTTAGAATGGTTGGTGTTCGATGAATTTAAGGTGCTTTTGGTCGGGACTTCTTGTGGGTATTTGCTGATTTACTCCTCAAATGGGGATTTGATTCTCAAGCAGATGATCCATCCTGGAAGAATTCTAAAGATTAGGGTTCATGGTTCGAAGAGAGATTCATCCCATGAATCTTTGTTCGAGGAGGTTTCGGTTGCTATGCCCGGTGTAATTGCTCGCATTGAAGCATCTGATATTCAGAACACACTGCAAAAATGGTTTGAAGAATCGAAGGCACGTTTTCGGGATCCAAAATCAGACAGTCGAGATACGGAGGATTCTGGAAATTCTTTTGAAAAGTTAGCCTATCAAGTATGGAATGTCAGCAAATACGGTTCTTGTGCCGATGCAGCAATCGTCGGTGTTATGCCTCCGCCATTGATGGAACTCCAGTCGAGTGAACGTTATTTTTGTGCAGTCACTGTTGGAAAGGATGCTGTAATTTCAGCATTCAGACTGTCTGAAGACAAGAGCAGGTCTTTAGTTGGAGCCATTTTATCAAAAGTTGTCCCTGCAACATTTTCAACAATAGCTTCGTTTTCGAAAGTGATTTGGCGAAGAGAACCAAAAACATCTAAAAAGCCAGATGCGAAGGGTCAAGATTTTGCTCGAGCCTCTTCTTTGACGTGCTTGAAGGACCATCCAAGGAAGGGTGAGAAACTGACTTTGTCTCCAAGCGGTACGTTGGCAGCAGTTACGGATTCACTGGGTCGAATATTGCTCCTGGACACGCAAGCTCTTGTCGTGGTTCGGCTATGGAAGGGATATCGTGATGCTAACTGTCTGTTCATGGAGATGTTGATCAATAGAGATACTGCATCATCAAGTTCTAATTCCATAGAGTATGAACCTGCAAAGAATGATTACTGCTTGTGTTTGGCTATTCATGCACCAAGAAAGGGGATAGTTGAGATATGGCAGATGAGAACAGGTGGTCGACTCCGAACCATTCGATGTGCAACGGGTAGCAAACTACTGCAACCATCCTCCAGGTTTGGATCGTCCATAGCTTCCTCTTATATCCCCTTGGAAGTTTTGTTATTAAATGGAGATTCTGGTCAAATTTCTGTTCTAAACCGAATCCTTTGATGAACTTTGAAACAGATTGAATCATTCATTCTCTCATTTCTTGATACAAAAAAAAAAAAAAAAAAAAAAAATTAAATTAAAT

Coding sequence (CDS)

ATGGGGATGCCGCAGATTCGGGTCGTCTTTCTCCATGAATCGAACCATCCGATCGTAGCCAAGGCCAATCTGCTGAAGCTCATCCTCACTAAAGTTATCCGCATAGTTACTGTTCGAGTTCTTACGGCGGTAGAAATGGGACTCGGCAGGCTTCTGGCTCTTCCGACGGACATTGTTCCTCAACTTCCGCCGGAACTCAGCGTTGCCTTCTATCCGGCCGGGAGAAGGCCCTCCACCCTTCTTCTTGCTCCGGCCGGCGCATGTACGAATGTCTGGACGGGAGTTTGCAAATGGAAACTGCGAAATTTGGCGAAAGATCGGAAGAACAGAAGCATTTGGAAGACCGGATATAATGTTTCAATTTCATCGCCATTAAAGCAAAGGATTCAAGGTTTTTTCTTCCCGGCAATGGCGAGACGACCCTACACCACGGTGTTGGGCTGCATAACTTGCGAGGAGCTCGATGATTTTGGCGCTGGGAAGGAAGGCTGGCTCGTCGACAACCCTAATCTTATATGCGCCCTCGATTCGCACTTTCTGGCGCTGGCCAATCGATCTATCATCCTTGTTCTTGGTTGGGCGGGTTCCGATGGATATAAGGTGAAGATCAGGCCTTCTGATTTGTCTCCGATCAAAGCGGAGTACATCTCCGCTTTAGAATGGTTGGTGTTCGATGAATTTAAGGTGCTTTTGGTCGGGACTTCTTGTGGGTATTTGCTGATTTACTCCTCAAATGGGGATTTGATTCTCAAGCAGATGATCCATCCTGGAAGAATTCTAAAGATTAGGGTTCATGGTTCGAAGAGAGATTCATCCCATGAATCTTTGTTCGAGGAGGTTTCGGTTGCTATGCCCGGTGTAATTGCTCGCATTGAAGCATCTGATATTCAGAACACACTGCAAAAATGGTTTGAAGAATCGAAGGCACGTTTTCGGGATCCAAAATCAGACAGTCGAGATACGGAGGATTCTGGAAATTCTTTTGAAAAGTTAGCCTATCAAGTATGGAATGTCAGCAAATACGGTTCTTGTGCCGATGCAGCAATCGTCGGTGTTATGCCTCCGCCATTGATGGAACTCCAGTCGAGTGAACGTTATTTTTGTGCAGTCACTGTTGGAAAGGATGCTGTAATTTCAGCATTCAGACTGTCTGAAGACAAGAGCAGGTCTTTAGTTGGAGCCATTTTATCAAAAGTTGTCCCTGCAACATTTTCAACAATAGCTTCGTTTTCGAAAGTGATTTGGCGAAGAGAACCAAAAACATCTAAAAAGCCAGATGCGAAGGGTCAAGATTTTGCTCGAGCCTCTTCTTTGACGTGCTTGAAGGACCATCCAAGGAAGGGTGAGAAACTGACTTTGTCTCCAAGCGGTACGTTGGCAGCAGTTACGGATTCACTGGGTCGAATATTGCTCCTGGACACGCAAGCTCTTGTCGTGGTTCGGCTATGGAAGGGATATCGTGATGCTAACTGTCTGTTCATGGAGATGTTGATCAATAGAGATACTGCATCATCAAGTTCTAATTCCATAGAGTATGAACCTGCAAAGAATGATTACTGCTTGTGTTTGGCTATTCATGCACCAAGAAAGGGGATAGTTGAGATATGGCAGATGAGAACAGGTGGTCGACTCCGAACCATTCGATGTGCAACGGGTAGCAAACTACTGCAACCATCCTCCAGGTTTGGATCGTCCATAGCTTCCTCTTATATCCCCTTGGAAGTTTTGTTATTAAATGGAGATTCTGGTCAAATTTCTGTTCTAAACCGAATCCTTTGA

Protein sequence

MGMPQIRVVFLHESNHPIVAKANLLKLILTKVIRIVTVRVLTAVEMGLGRLLALPTDIVPQLPPELSVAFYPAGRRPSTLLLAPAGACTNVWTGVCKWKLRNLAKDRKNRSIWKTGYNVSISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL
Homology
BLAST of Cp4.1LG06g06570 vs. ExPASy Swiss-Prot
Match: Q9H2M9 (Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens OX=9606 GN=RAB3GAP2 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-25
Identity = 102/395 (25.82%), Postives = 175/395 (44.30%), Query Frame = 0

Query: 226 EFKVLLVGTSCGYLLIYSSNGDLILKQMIH--PGRILKIRVHGSKRDSSHESLFEEVSVA 285
           ++  ++VG + GY+  Y+ NG L+L Q+++  P   LK R +   R        EE+S+ 
Sbjct: 152 DWTCIVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSIL 211

Query: 286 MPGVIARIEASDIQNTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGS 345
            P  I  I+   +  +L+          R+  + +  + +       LAY+ W +    +
Sbjct: 212 YPAAIVTIDGFSLFQSLR--------ACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDT 271

Query: 346 CADAAIVGVM---PPPLMELQSSERYFCA------------VTVGKDAVISAFRLSEDKS 405
             D A VG+M   P   M+  S+   F A            +TVG +     F   E  +
Sbjct: 272 IIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGST 331

Query: 406 RSLVG----AILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARASSLTCLKDH 465
           + L+     A+ SK+  A F+  + +     + E +  +K   K +     +    L D 
Sbjct: 332 QPLLSHVALAVASKLTSALFNAASGWLGWKSKHEEEAVQKQKPKVEPATPLAVRFGLPDS 391

Query: 466 PRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLINRDTAS 525
            R GE + LSP  TLAAVTD  GR++LLD    + +R+WKGYRDA   +++ +   D   
Sbjct: 392 RRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQTV--EDLHE 451

Query: 526 SSSNSIEYEPAKND-----YCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLLQPS 585
                 ++ P  N          L I+APR+GI+E+W  + G R+         +LL P 
Sbjct: 452 RVPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFNVGKHCRLLYPG 511

Query: 586 SR---FGSSIASSYIP--LEVLLLNGDSGQISVLN 590
            +     +  + S+ P   ++ L++  SG +  +N
Sbjct: 512 YKIMGLNNVTSQSWQPQTYQICLVDPVSGSVKTVN 536

BLAST of Cp4.1LG06g06570 vs. ExPASy Swiss-Prot
Match: Q5U1Z0 (Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=10116 GN=Rab3gap2 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 1.1e-25
Identity = 111/440 (25.23%), Postives = 189/440 (42.95%), Query Frame = 0

Query: 161 KEGWLVDNP-NLICALDSHFLALANRSIILVLGWAGSDGYKVKIR-----PSDLSPIKAE 220
           K  WL +   +L    D   +A   ++  LV  W  SD  K +++        +S  + E
Sbjct: 70  KHSWLQECVLSLSPTSDLMVIAREQKAAFLVRKWKHSDKGKEEMQFAVGWSGSVSAEEGE 129

Query: 221 YISALEWLVF----------DEFKVLLVGTSCGYLLIYSSNGDLILKQMIHPGRI--LKI 280
           Y+++   +             ++  ++VG + GY+  Y + G L+L Q+++  R+  LK 
Sbjct: 130 YVTSALCIPLASQKRSSTGRPDWTCIVVGFTSGYVRFY-TEGVLLLAQLLNEDRVLQLKC 189

Query: 281 RVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKSDSRDTE 340
           R +   R        EE+S+  P  I  I+   +  +L+          R+  + +  + 
Sbjct: 190 RTYEIPRHPGVTEQNEELSILYPAAIVTIDGFSLFQSLR--------ACRNQVAKAAASG 249

Query: 341 DSGNSFEKLAYQVWNVSKYGSCADAAIVGVM---PPPLMELQSSERYFCA---------- 400
           +       LAY+ W +    +  D A +G+M   P   M+  S+   F A          
Sbjct: 250 NENIQPPPLAYKKWGLQDIDTIIDHASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMS 309

Query: 401 --VTVGKDAVISAFRLSEDKSRSLVG----AILSKVVPATFSTIASFSKVIWRREPKTSK 460
             +TVG       F   E  ++ L+     A+ SK+  A FS  + +     + E +T +
Sbjct: 310 QYITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGWLGWKSKHEEETVQ 369

Query: 461 KPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLW 520
           K   K +     +    L D  R GE + LSP  TLAAVTD  GR++LLD    + +R+W
Sbjct: 370 KQKPKMEPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMW 429

Query: 521 KGYRDANCLFMEMLINRDTASSSSNSIEYEPAKND-----YCLCLAIHAPRKGIVEIWQM 559
           KGYRDA   +++++   D         ++ P  N          L I+APR+GI+E+W  
Sbjct: 430 KGYRDAQIGWIQIV--EDLHERVPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILEVWST 489

BLAST of Cp4.1LG06g06570 vs. ExPASy Swiss-Prot
Match: Q8BMG7 (Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN=Rab3gap2 PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 1.3e-23
Identity = 96/357 (26.89%), Postives = 155/357 (43.42%), Query Frame = 0

Query: 226 EFKVLLVGTSCGYLLIYSSNGDLILKQMIHPGRI--LKIRVHGSKRDSSHESLFEEVSVA 285
           ++  ++VG + GY+  Y + G L+L Q+++  ++  LK R +   R        EE+S+ 
Sbjct: 151 DWTCIVVGFTSGYVRFY-TEGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSIL 210

Query: 286 MPGVIARIEASDIQNTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGS 345
            P  I  I+   +  +L+          R+  + +  + +       LAY+ W +    +
Sbjct: 211 YPAAIVTIDGFSLFQSLR--------ACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDT 270

Query: 346 CADAAIVGVM---PPPLMELQSSERYFCA------------VTVGKDAVISAFRLSEDKS 405
             D A VG+M   P   M+  S+   F A            +TVG       F   E  +
Sbjct: 271 IIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGST 330

Query: 406 RSLVG----AILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARASSLTCLKDH 465
           + L+     A+ SK+  A FS  + +     + E  T +K   K +     +    L D 
Sbjct: 331 QPLLSHVALAVASKLTSALFSAASGWLGWKSKHEEDTVQKQKPKMEPATPLAVRFGLPDS 390

Query: 466 PRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDAN---CLFMEMLINRD 525
            R GE + LSP  TLAAVTD  GR++LLD    + +R+WKGYRDA       +E L  R 
Sbjct: 391 RRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDLHERV 450

Query: 526 TASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLLQP 559
                 +        +     L I+APR+GI+E+W  + G R+         +LL P
Sbjct: 451 PEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFNVGKHCRLLYP 498

BLAST of Cp4.1LG06g06570 vs. ExPASy Swiss-Prot
Match: Q9VKB9 (Rab3 GTPase-activating protein regulatory subunit OS=Drosophila melanogaster OX=7227 GN=Rab3-GAP PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 6.9e-17
Identity = 82/350 (23.43%), Postives = 144/350 (41.14%), Query Frame = 0

Query: 226 EFKVLLVGTSCGYLLIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMP 285
           E+  + VG   G +  Y+ +G  +  Q      ++ +++  + R S  +SL   + +  P
Sbjct: 102 EWTCVAVGLCSGMVTFYTDSGVKLFSQCCQEDPVIGVKLQSAPRHSEADSL---LYIIYP 161

Query: 286 GVIARIEASDIQNTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCA 345
             +  I+  DI  TL       +   R     S         F+K  ++     +     
Sbjct: 162 RCLCFIQGQDILPTLNNCRHNVQ---RGALERSSYPTADVVPFQKYKFK---QEREAVIN 221

Query: 346 DAAIVGVMPPP----LMELQSSERYFCAV-----------TVGKDAVISAFRLSEDKSRS 405
           DAAI     PP    +++      YF  V             G +  +  F+  E     
Sbjct: 222 DAAISTTQRPPTYDYIVQQTIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 281

Query: 406 LVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARASS---LTC-LKDHPR 465
            +G +   V+   +  +      I+RR P+    P+          +   + C L D  R
Sbjct: 282 SLGEVAKDVIGIAYKNLLG---GIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKR 341

Query: 466 KGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEMLINRDTASSS 525
            G  L+++P G LA VTD+L R++L+DT   +++R+WKGYRDA C F+ +         S
Sbjct: 342 DGLTLSVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV------KEKS 401

Query: 526 SNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 557
              I+    K    L L I+APR G ++IW ++ G ++     +   +L+
Sbjct: 402 VRGIKTHKRK---ALFLVIYAPRMGCLDIWALQNGPKVAAFNVSKSGQLM 430

BLAST of Cp4.1LG06g06570 vs. NCBI nr
Match: XP_023535256.1 (rab3 GTPase-activating protein non-catalytic subunit-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 941 bits (2431), Expect = 0.0
Identity = 474/475 (99.79%), Postives = 475/475 (100.00%), Query Frame = 0

Query: 118 NVSISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDS 177
           +VSISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDS
Sbjct: 5   SVSISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDS 64

Query: 178 HFLALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCG 237
           HFLALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCG
Sbjct: 65  HFLALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCG 124

Query: 238 YLLIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQ 297
           YLLIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQ
Sbjct: 125 YLLIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQ 184

Query: 298 NTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPL 357
           NTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPL
Sbjct: 185 NTLQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPL 244

Query: 358 MELQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRR 417
           MELQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRR
Sbjct: 245 MELQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRR 304

Query: 418 EPKTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQAL 477
           EPKTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQAL
Sbjct: 305 EPKTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQAL 364

Query: 478 VVVRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQ 537
           VVVRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQ
Sbjct: 365 VVVRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQ 424

Query: 538 MRTGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           MRTGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL
Sbjct: 425 MRTGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 479

BLAST of Cp4.1LG06g06570 vs. NCBI nr
Match: XP_022937205.1 (rab3 GTPase-activating protein non-catalytic subunit [Cucurbita moschata])

HSP 1 Score: 926 bits (2393), Expect = 0.0
Identity = 467/473 (98.73%), Postives = 468/473 (98.94%), Query Frame = 0

Query: 120 SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF 179
           SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF
Sbjct: 7   SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF 66

Query: 180 LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 239
           LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL
Sbjct: 67  LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 126

Query: 240 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNT 299
           LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHES FEEVSVAMPGVIARIEASDIQNT
Sbjct: 127 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESSFEEVSVAMPGVIARIEASDIQNT 186

Query: 300 LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME 359
           LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME
Sbjct: 187 LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME 246

Query: 360 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP 419
           LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP
Sbjct: 247 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP 306

Query: 420 KTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 479
           KTSKKPDAKGQ FARAS LTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV
Sbjct: 307 KTSKKPDAKGQAFARASPLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 366

Query: 480 VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 539
           VRLWKGYRDANCLFMEMLINRDTASSS NSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR
Sbjct: 367 VRLWKGYRDANCLFMEMLINRDTASSSCNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 426

Query: 540 TGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           TGGRLRTI+CATGSKLLQPSSRFGSSIAS YIPLEVLLLNGDSGQISVLNRIL
Sbjct: 427 TGGRLRTIQCATGSKLLQPSSRFGSSIASPYIPLEVLLLNGDSGQISVLNRIL 479

BLAST of Cp4.1LG06g06570 vs. NCBI nr
Match: XP_022976490.1 (rab3 GTPase-activating protein non-catalytic subunit [Cucurbita maxima])

HSP 1 Score: 920 bits (2377), Expect = 0.0
Identity = 460/473 (97.25%), Postives = 467/473 (98.73%), Query Frame = 0

Query: 120 SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF 179
           SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFG+GKEGWLVDNPNLICALDSHF
Sbjct: 7   SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGSGKEGWLVDNPNLICALDSHF 66

Query: 180 LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 239
           LALANRSIIL+LGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL
Sbjct: 67  LALANRSIILILGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 126

Query: 240 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNT 299
           LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHES FEEVS+AMPGVIARIEASDIQNT
Sbjct: 127 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESSFEEVSIAMPGVIARIEASDIQNT 186

Query: 300 LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME 359
           LQKWFEESKARFRDPKSDSRD EDSGNSFEKLAYQVWNVSKYGSCADAAI+GVMPPPLME
Sbjct: 187 LQKWFEESKARFRDPKSDSRDMEDSGNSFEKLAYQVWNVSKYGSCADAAIIGVMPPPLME 246

Query: 360 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP 419
           LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSK+IW+ EP
Sbjct: 247 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWQSEP 306

Query: 420 KTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 479
           KTSKKPD KGQDFARAS LTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV
Sbjct: 307 KTSKKPDPKGQDFARASPLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 366

Query: 480 VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 539
           VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR
Sbjct: 367 VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 426

Query: 540 TGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           TGGRLRTIRCATGSKLLQPSSRFGSSIA+ YIPLEVLLLNGDSGQISVLNRIL
Sbjct: 427 TGGRLRTIRCATGSKLLQPSSRFGSSIATPYIPLEVLLLNGDSGQISVLNRIL 479

BLAST of Cp4.1LG06g06570 vs. NCBI nr
Match: KAG6591918.1 (hypothetical protein SDJN03_14264, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 843 bits (2179), Expect = 6.91e-296
Identity = 428/448 (95.54%), Postives = 432/448 (96.43%), Query Frame = 0

Query: 137 MARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGS 196
           MARRPYTTVLGCITCEELDDFGAGKE WLVDNPNLICALDSHFLALANRSIILVLGWAGS
Sbjct: 1   MARRPYTTVLGCITCEELDDFGAGKESWLVDNPNLICALDSHFLALANRSIILVLGWAGS 60

Query: 197 DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 256
           DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP
Sbjct: 61  DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 120

Query: 257 GRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 316
           GRILKIRVHGSKRDSSHES FEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS
Sbjct: 121 GRILKIRVHGSKRDSSHESSFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 180

Query: 317 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 376
           DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA
Sbjct: 181 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 240

Query: 377 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARAS 436
           VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQ FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQAFARAS 300

Query: 437 SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 496
           SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 497 LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 556
           LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL
Sbjct: 361 LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 420

Query: 557 QPSSRFGSSIAS-----SYIPLEVLLLN 579
           QPSSR   +I S     +Y P   LL++
Sbjct: 421 QPSSRRVVTIHSMPPLMAYFPSSSLLIS 448

BLAST of Cp4.1LG06g06570 vs. NCBI nr
Match: XP_038898701.1 (rab3 GTPase-activating protein non-catalytic subunit [Benincasa hispida])

HSP 1 Score: 819 bits (2115), Expect = 2.25e-295
Identity = 408/456 (89.47%), Postives = 427/456 (93.64%), Query Frame = 0

Query: 137 MARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGS 196
           MARR +TT LGCI CEEL DFGAGKEGWLVDNPNL+CALDSH LALANRSIILVLGWAGS
Sbjct: 1   MARRTFTTELGCIACEELADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWAGS 60

Query: 197 DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 256
           DGY+ KIRPSDLSPI+AEYISALEWLVFDE KVLLVGTSCGYLLIYS +GDLILKQMIHP
Sbjct: 61  DGYQAKIRPSDLSPIEAEYISALEWLVFDEIKVLLVGTSCGYLLIYSLSGDLILKQMIHP 120

Query: 257 GRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 316
           GRI+KIRVHGSKRD SH S FEEVS+AMPGVIARIE SD+QNTLQKWF+ES ARF DPKS
Sbjct: 121 GRIIKIRVHGSKRDLSHGSSFEEVSIAMPGVIARIEGSDMQNTLQKWFQESNARFWDPKS 180

Query: 317 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 376
           D  D EDS NSFEKLAYQVWNVSKYG+CADAAI GVMPPPLMELQSSERYFCAVTVG+DA
Sbjct: 181 DRWDMEDSENSFEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 377 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARAS 436
           VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSK+IWR EPKTSKKPD KGQ FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKLIWRSEPKTSKKPDVKGQAFARAS 300

Query: 437 SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 496
            LTCLKDHPRKGEKLTLSPSGTLAA+TDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 497 LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 556
           L+NRDTASSSSNSI+YEP+KNDYCLCLAIHAPRKGIVEIWQMRTG RLRTIRC  GSKLL
Sbjct: 361 LVNRDTASSSSNSIDYEPSKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLL 420

Query: 557 QPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           QPSSRFGSS+AS Y+PLEV LLNGDSGQISV+NR L
Sbjct: 421 QPSSRFGSSMASPYVPLEVFLLNGDSGQISVINRTL 456

BLAST of Cp4.1LG06g06570 vs. ExPASy TrEMBL
Match: A0A6J1FFX8 (rab3 GTPase-activating protein non-catalytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111443570 PE=4 SV=1)

HSP 1 Score: 926 bits (2393), Expect = 0.0
Identity = 467/473 (98.73%), Postives = 468/473 (98.94%), Query Frame = 0

Query: 120 SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF 179
           SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF
Sbjct: 7   SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF 66

Query: 180 LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 239
           LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL
Sbjct: 67  LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 126

Query: 240 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNT 299
           LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHES FEEVSVAMPGVIARIEASDIQNT
Sbjct: 127 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESSFEEVSVAMPGVIARIEASDIQNT 186

Query: 300 LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME 359
           LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME
Sbjct: 187 LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME 246

Query: 360 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP 419
           LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP
Sbjct: 247 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP 306

Query: 420 KTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 479
           KTSKKPDAKGQ FARAS LTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV
Sbjct: 307 KTSKKPDAKGQAFARASPLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 366

Query: 480 VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 539
           VRLWKGYRDANCLFMEMLINRDTASSS NSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR
Sbjct: 367 VRLWKGYRDANCLFMEMLINRDTASSSCNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 426

Query: 540 TGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           TGGRLRTI+CATGSKLLQPSSRFGSSIAS YIPLEVLLLNGDSGQISVLNRIL
Sbjct: 427 TGGRLRTIQCATGSKLLQPSSRFGSSIASPYIPLEVLLLNGDSGQISVLNRIL 479

BLAST of Cp4.1LG06g06570 vs. ExPASy TrEMBL
Match: A0A6J1IJM5 (rab3 GTPase-activating protein non-catalytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111476873 PE=4 SV=1)

HSP 1 Score: 920 bits (2377), Expect = 0.0
Identity = 460/473 (97.25%), Postives = 467/473 (98.73%), Query Frame = 0

Query: 120 SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHF 179
           SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFG+GKEGWLVDNPNLICALDSHF
Sbjct: 7   SISSPLKQRIQGFFFPAMARRPYTTVLGCITCEELDDFGSGKEGWLVDNPNLICALDSHF 66

Query: 180 LALANRSIILVLGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 239
           LALANRSIIL+LGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL
Sbjct: 67  LALANRSIILILGWAGSDGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYL 126

Query: 240 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNT 299
           LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHES FEEVS+AMPGVIARIEASDIQNT
Sbjct: 127 LIYSSNGDLILKQMIHPGRILKIRVHGSKRDSSHESSFEEVSIAMPGVIARIEASDIQNT 186

Query: 300 LQKWFEESKARFRDPKSDSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLME 359
           LQKWFEESKARFRDPKSDSRD EDSGNSFEKLAYQVWNVSKYGSCADAAI+GVMPPPLME
Sbjct: 187 LQKWFEESKARFRDPKSDSRDMEDSGNSFEKLAYQVWNVSKYGSCADAAIIGVMPPPLME 246

Query: 360 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREP 419
           LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSK+IW+ EP
Sbjct: 247 LQSSERYFCAVTVGKDAVISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWQSEP 306

Query: 420 KTSKKPDAKGQDFARASSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 479
           KTSKKPD KGQDFARAS LTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV
Sbjct: 307 KTSKKPDPKGQDFARASPLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVV 366

Query: 480 VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 539
           VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR
Sbjct: 367 VRLWKGYRDANCLFMEMLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMR 426

Query: 540 TGGRLRTIRCATGSKLLQPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           TGGRLRTIRCATGSKLLQPSSRFGSSIA+ YIPLEVLLLNGDSGQISVLNRIL
Sbjct: 427 TGGRLRTIRCATGSKLLQPSSRFGSSIATPYIPLEVLLLNGDSGQISVLNRIL 479

BLAST of Cp4.1LG06g06570 vs. ExPASy TrEMBL
Match: A0A5A7VI11 (Rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00990 PE=4 SV=1)

HSP 1 Score: 809 bits (2089), Expect = 9.86e-292
Identity = 403/456 (88.38%), Postives = 424/456 (92.98%), Query Frame = 0

Query: 137 MARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGS 196
           MARR +TT LGCI CE+L DFGAGKEGWLVDNPNL+CALDSH LALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 197 DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 256
           DGY++KIRPSDLSPI+AEYISALEWLV DE KV+LVGTSCGY LIYS +GDLILKQMIHP
Sbjct: 61  DGYRLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLSGDLILKQMIHP 120

Query: 257 GRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 316
           GRILKIRVHGSKRD SH S  EEVSVAMPGVIARIE SDIQNTLQKWF+ES ARF DPKS
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSVAMPGVIARIEGSDIQNTLQKWFQESNARFWDPKS 180

Query: 317 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 376
             +D  DS NS EKLAYQVWNVSKYG+CADAAI GVMPPPLMELQSSERYFCAVTVG+DA
Sbjct: 181 QQQDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 377 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARAS 436
           VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSK+IWR EPKTSKKPDAKGQ FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 437 SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 496
            LTCLKDHPRKGEKLTLSPSGTLAA+TDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 497 LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 556
           L+NRDTASSSSNS++YEPAKNDYCLCLAIHAPRKGIVEIWQMRTG RLRTIRC+ GSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCSKGSKLL 420

Query: 557 QPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           QPSSRFGSS+ S Y+PLEV LLNGDSGQISVLNR L
Sbjct: 421 QPSSRFGSSMVSPYVPLEVFLLNGDSGQISVLNRTL 456

BLAST of Cp4.1LG06g06570 vs. ExPASy TrEMBL
Match: A0A1S3CJY7 (rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501813 PE=4 SV=1)

HSP 1 Score: 809 bits (2089), Expect = 9.86e-292
Identity = 403/456 (88.38%), Postives = 424/456 (92.98%), Query Frame = 0

Query: 137 MARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGS 196
           MARR +TT LGCI CE+L DFGAGKEGWLVDNPNL+CALDSH LALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDNPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 197 DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 256
           DGY++KIRPSDLSPI+AEYISALEWLV DE KV+LVGTSCGY LIYS +GDLILKQMIHP
Sbjct: 61  DGYRLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLSGDLILKQMIHP 120

Query: 257 GRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 316
           GRILKIRVHGSKRD SH S  EEVSVAMPGVIARIE SDIQNTLQKWF+ES ARF DPKS
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSVAMPGVIARIEGSDIQNTLQKWFQESNARFWDPKS 180

Query: 317 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 376
             +D  DS NS EKLAYQVWNVSKYG+CADAAI GVMPPPLMELQSSERYFCAVTVG+DA
Sbjct: 181 QQQDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 377 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARAS 436
           VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSK+IWR EPKTSKKPDAKGQ FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 437 SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 496
            LTCLKDHPRKGEKLTLSPSGTLAA+TDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 497 LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 556
           L+NRDTASSSSNS++YEPAKNDYCLCLAIHAPRKGIVEIWQMRTG RLRTIRC+ GSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCSKGSKLL 420

Query: 557 QPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           QPSSRFGSS+ S Y+PLEV LLNGDSGQISVLNR L
Sbjct: 421 QPSSRFGSSMVSPYVPLEVFLLNGDSGQISVLNRTL 456

BLAST of Cp4.1LG06g06570 vs. ExPASy TrEMBL
Match: A0A0A0L025 (RAB3GAP2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627180 PE=4 SV=1)

HSP 1 Score: 795 bits (2053), Expect = 2.97e-286
Identity = 396/456 (86.84%), Postives = 418/456 (91.67%), Query Frame = 0

Query: 137 MARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGS 196
           MARR +TT LGCI CE+L DFGAGKEGWLVD+PNL+CALDSH LALANRSIILVLGW+GS
Sbjct: 1   MARRTFTTELGCIACEDLADFGAGKEGWLVDSPNLLCALDSHSLALANRSIILVLGWSGS 60

Query: 197 DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 256
           DGY +KIRPSDLSPI+AEYISALEWLV DE KV+LVGTSCGY LIYS  GDLILKQMIHP
Sbjct: 61  DGYPLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLRGDLILKQMIHP 120

Query: 257 GRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 316
           GRILKIRVHGSKRD SH S  EEVS+AMPGVIARIE SDIQNTLQKWF+ES ++F DPKS
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSIAMPGVIARIEGSDIQNTLQKWFQESSSQFWDPKS 180

Query: 317 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 376
             RD  DS NS EKLAYQVWNVSKYG+CADAAI GVMPPPLMELQSSERYFCAVTVG+DA
Sbjct: 181 HQRDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240

Query: 377 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSKKPDAKGQDFARAS 436
           VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSK+IWR EPKTSKKPDAKGQ FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300

Query: 437 SLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 496
            LTCLKDHPRKGEKLTLSPSGTLAA+TDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360

Query: 497 LINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKLL 556
           L+NRDTASSSSNS++YEPAKNDYCLCLAIHAPRKGIVEIWQMRTG RLRTIRC  GSKLL
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGRRLRTIRCTKGSKLL 420

Query: 557 QPSSRFGSSIASSYIPLEVLLLNGDSGQISVLNRIL 592
           QPS R GSS+ S Y+PLEV LLNGDSGQI V+NR L
Sbjct: 421 QPSFRLGSSMDSPYVPLEVFLLNGDSGQICVINRTL 456

BLAST of Cp4.1LG06g06570 vs. TAIR 10
Match: AT3G14910.1 (unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). )

HSP 1 Score: 627.5 bits (1617), Expect = 1.1e-179
Identity = 309/458 (67.47%), Postives = 376/458 (82.10%), Query Frame = 0

Query: 137 MARRPYTTVLGCITCEELDDFGAGKEGWLVDNPNLICALDSHFLALANRSIILVLGWAGS 196
           MA+R + T LGCI CEEL + GAGKEGWLV+NPNL+ ALDSH LALANR +IL++ W   
Sbjct: 1   MAKRIHLTELGCIACEELTELGAGKEGWLVNNPNLLSALDSHSLALANRFLILIVNWGDP 60

Query: 197 DGYKVKIRPSDLSPIKAEYISALEWLVFDEFKVLLVGTSCGYLLIYSSNGDLILKQMIHP 256
           D  +VKIRP DLSPI+AE I+A+EWLVFD+ +V++ GTSCGYLL+YS  GDLI KQ++H 
Sbjct: 61  DAPRVKIRP-DLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVTGDLIHKQIVHQ 120

Query: 257 GRILKIRVHGSKRDSSHESLFEEVSVAMPGVIARIEASDIQNTLQKWFEESKARFRDPKS 316
            RILKIRV G+K+D   E+  EE+ + +PGVIAR + S+IQ+ +QKW +E  + F D K+
Sbjct: 121 SRILKIRVRGTKKDLMQETSSEEICIVLPGVIARFDGSNIQSMVQKWVQEKNSNFWDQKN 180

Query: 317 DSRDTEDSGNSFEKLAYQVWNVSKYGSCADAAIVGVMPPPLMELQSSERYFCAVTVGKDA 376
              D ED+G+ +++L YQ+WNV+K G C DA + GVMPPPL+ELQSS+RY+CAVT+G+D+
Sbjct: 181 RKGDAEDTGSLYQRLPYQIWNVNKNGVCVDATVTGVMPPPLLELQSSQRYYCAVTIGEDS 240

Query: 377 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKVIWRREPKTSK-KPDAKGQDFARA 436
           VISA+RLSED+ RSLVGAILSKVVPA  STIASFSK+IWR   ++ K KP+AK Q FARA
Sbjct: 241 VISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQSPKRKPEAKTQSFARA 300

Query: 437 SSLTCLKDHPRKGEKLTLSPSGTLAAVTDSLGRILLLDTQALVVVRLWKGYRDANCLFME 496
           SSLTC+KD+PRKGEKLTLSPSGTLAA+TDSLGRILLLDTQALVVVRLWKGYRDA+C+FME
Sbjct: 301 SSLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 360

Query: 497 MLINRDTASSSSNSIEYEPAKNDYCLCLAIHAPRKGIVEIWQMRTGGRLRTIRCATGSKL 556
           ML  +D   S    I  EP K+DYCLCLAIHAPRKGI+E+WQMRTG RL TI+CA GSKL
Sbjct: 361 MLAKKDKGKS---VIHTEPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCAKGSKL 420

Query: 557 LQPSSRFGSSIASS-YIPLEVLLLNGDSGQISVLNRIL 593
           LQP+ RFGS+ +SS YIPLEV LLNGDSGQ+S+LNR L
Sbjct: 421 LQPAYRFGSNSSSSPYIPLEVFLLNGDSGQVSMLNRSL 454

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9H2M91.1e-2525.82Rab3 GTPase-activating protein non-catalytic subunit OS=Homo sapiens OX=9606 GN=... [more]
Q5U1Z01.1e-2525.23Rab3 GTPase-activating protein non-catalytic subunit OS=Rattus norvegicus OX=101... [more]
Q8BMG71.3e-2326.89Rab3 GTPase-activating protein non-catalytic subunit OS=Mus musculus OX=10090 GN... [more]
Q9VKB96.9e-1723.43Rab3 GTPase-activating protein regulatory subunit OS=Drosophila melanogaster OX=... [more]
Match NameE-valueIdentityDescription
XP_023535256.10.099.79rab3 GTPase-activating protein non-catalytic subunit-like [Cucurbita pepo subsp.... [more]
XP_022937205.10.098.73rab3 GTPase-activating protein non-catalytic subunit [Cucurbita moschata][more]
XP_022976490.10.097.25rab3 GTPase-activating protein non-catalytic subunit [Cucurbita maxima][more]
KAG6591918.16.91e-29695.54hypothetical protein SDJN03_14264, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038898701.12.25e-29589.47rab3 GTPase-activating protein non-catalytic subunit [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1FFX80.098.73rab3 GTPase-activating protein non-catalytic subunit OS=Cucurbita moschata OX=36... [more]
A0A6J1IJM50.097.25rab3 GTPase-activating protein non-catalytic subunit OS=Cucurbita maxima OX=3661... [more]
A0A5A7VI119.86e-29288.38Rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo ... [more]
A0A1S3CJY79.86e-29288.38rab3 GTPase-activating protein non-catalytic subunit isoform X1 OS=Cucumis melo ... [more]
A0A0A0L0252.97e-28686.84RAB3GAP2_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G627180 ... [more]
Match NameE-valueIdentityDescription
AT3G14910.11.1e-17967.47unknown protein; Has 158 Blast hits to 158 proteins in 77 species: Archae - 0; B... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032839Rab3-GAP regulatory subunit, N-terminalPFAMPF14655RAB3GAP2_Ncoord: 164..556
e-value: 1.1E-108
score: 364.1
IPR026059Rab3-GAP regulatory subunitPANTHERPTHR12472RAB3-GAP REGULATORY DOMAINcoord: 138..586
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 215..549

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g06570.1Cp4.1LG06g06570.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043087 regulation of GTPase activity
molecular_function GO:0005515 protein binding