Cp4.1LG06g06090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g06090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	plastid transcriptionally active 6
Location	Cp4.1LG06: 3732649 .. 3736398 (-)
RNA-Seq Expression	Cp4.1LG06g06090
Synteny	Cp4.1LG06g06090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCTTTTAAAAAAAAAATTATCCATCCGACAATATCCATCTACAAACTCCAATCCCGCCATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGGCTACGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCCACACCTCCTTAGTTTTCCCTACCGAAAATCTACTCCCTCTGCATCCCCCCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGCGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGACAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCGGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAATGAAGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTTTATGATTTCAGAGAGGTTAGTGGCTGTTTTGCGTAATTCAATTCAATTCTTGCTTTCGCAGATTCATATGATAGTTGAAATAATTATTCGTTGATGTGTATTGTGGCTGTAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGGTACCATTCTTTGTGTTCATATACATCAAGAACATGTAAACTGTCTATTTTGGTCCTGAATTTTGGATTAGAAGACTATTTGAACCAGTTTCATTACTGATTAGCAAATTATTCATCAGAAACTTGGGATGTTCATTTAGCTTGTTGACCGATAATCGTTTATGTAACGGCTTAAGTCCACCGCTAGTGGATACTGTTCTCTTTGGGTTTTTCCTTTCGGGATTTCCCTCAAGGTTGTAAAACGCGTCTGGTAGGGAGTGGTTTCCACACCCTTATAAAGAATGTTTCATTTTCTTCCCAAACCGAGGTAGGATCTCACAATCCACCCGATTTAGGGACCATTGTCCTCGTTGACACCCGTTTCCTTCTCCAATCGATGTGGGACCCCCCAATTCACCTCCCTTTGGAGTTCAGTGTTCTTGTTGGCACACCGTCTTGTGTCCACCCCTCGCCTCGTGTGTCCTTGTTGGCACACCGCCTCATGTCCACCTCCTTCGGGGTTCAGCCTCCACGCTGGCACATTGCCTGGTGTCTGGCTTTGATACCATTTGTGACAGCCCAAGCTCACCGCTAGCGATATTGTCCTCTTTGGGCTTTCCCTTCTAGGCTTTCTCTCAAGTTTTTAAAACGCGTCTACTAGTGGTTTCCACACCCTTATGAAGAATGTTTCATTCTCTTCCCCAACCGATGTGAGGTCTCACAATCCATCCCTTTCAGGAGCCAGTGTTCTCGCCCACACTCGTTCCCTTCTCCAATCGACCCCCAACCCACCCCCTTCAGGGCCCAGTGTCCTTGTTGACACACCGCCTCGTGTCTACCCCCTCTCGCCTCGTGTGTTTCTGTTAGCATACCGTCTCGTGTCCACCCCCTTCGGGGCTTAGCCTCCTCGCTGGCACATCGCCTGGTGTCTGATTCTGATACCAATTGTAACAGCCCAAACCTACTGCTAGTAAATATTCTCCTCTTTGGACTTTCCCCTTCGGGCTTTTCCTCAAGGTTTTAAAACGAGATTGCTAGGGAGAGGTTTACACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACGAATGAGGAATCTGACCGTTTATGTTTTTGTTAAATGATTGTTGAAAAAATTGACAGTTAATTTCTTGGAAAGATTTGTGACTAAAACGGACTTATTGTACGTTAAGGGACCTAAACATAACTTCTAAAAGTTTAGAGATCATTATGGAACAAACATCATAGTTCAAGATATTATGATGCATAAGGATTGATTTTATTTGTGTATGGTCTTACTTTTCTTCACAACTGCAGTATATTAGATGTGCTCAGAGTGATTACGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTAAGGGTACACTCAGGGCTTTGGTATTTGTTCACTCTTTTCTTAATTTCTAGAGAAAATGATGATAATTTCAAATGGGATTCTACCATACTTCATTATTTCATTGACTCAGGGCTATGTATATTGAAGATTATAGGAATGCAGTTAGTTGACATTTCTTTGTAAATCGGAGTATGGGGTTTCCGATAGAATATTAGAATAGAAGTAGTCGGTAGGACATGAGAAATGCTGCTCGTAGACTCAGTAATGGTAACAACCCAAGCCCACCGCTAGTAGATATTGTCCACTTTAGGCTTCCCCTACCGGGCTTCCCTTCAAGGTTTTTAAAACACTTTTGCTAGGGGGAGGTTTCCACGCCCTTATAAAGAATGCTTTGTTCTCCCATATCGATTGGAGAGGAGAATGAAACATTCTTTATAAGAGTGTGGAAACCTCTTCCCAGCAGACGCGTTCTAAAAACCTCGAGAGGAAACTCGAAAGGGAAAACTGAAAGCGGATAATATCTGCTAGTGGTGGACTTGGGCGGTTACAATAATGCACGAAAGTCAAGTTTATATGCTCGTGATTATCCTTATGTTATCTGTCAGGGATGGGAATGTGACAGATTTAAGGACTTTTGTGTGAGCAATTCGTTTCTCTTTTGCAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTCGAGGAAATATATGTGATCGATTCAAAAACTAAGTCAATCACCAGGGCTAAAGTCTTGGTAAGACTCTTTGTTCTTGGGTTCTGCACTGTTTCGACGATAAGTTCAAAACTCGAGGTCGAAGAGTAGTTTTCAGGCTGCTTCCTATCTGTTAAAGTAGCTTAAAATACTTCCCTTTGCTCTCATGTAGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGGTATCGGTTTCTTATCTACCTGATTTCTGCAGCATTCTCTGCTCTGTTTTTTTCTTAATCCCCTGTACTTTTGATGCAATATAGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACCATGCAAAAGTTATTGTTTTGAAGTTTAAAGGTTGACATGAACGAGACATCCAGATTACCTGTCATGACGTTTCTCTCGTGCGAGTTCTCGACAGATCTCCTGCTCCATGCCCTCGTGATAGGTAATGTTTTCGGTTACGGCTAGTTACTTACACTTGCAATGATTGATCTTTCGGGTTCGTTCTACTCGCTTTCGTTCTTCGTCATCGTTAATCTAGGAAAGCTAGCTTTTTATAGATTTGTAATGCTTAGAAAAGAAAAAATGGTTGCATCTTTGGGCTGTTTGCTGCAGTTGTCGGTTCTATTTTGATTAACCATTGTAAGAAAATTTTGAATTCTTGTGTTATATGAGGTTAGAACTGCTGTGAACTGATGCAATTTGAAGCAAAGAAACATTCATAACTGTCCAATGGT

mRNA sequence

TACCTTTTAAAAAAAAAATTATCCATCCGACAATATCCATCTACAAACTCCAATCCCGCCATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGGCTACGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCCACACCTCCTTAGTTTTCCCTACCGAAAATCTACTCCCTCTGCATCCCCCCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGCGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGACAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCGGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAATGAAGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTACGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTCGAGGAAATATATGTGATCGATTCAAAAACTAAGTCAATCACCAGGGCTAAAGTCTTGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACCATGCAAAAGTTATTGTTTTGAAGTTTAAAGGTTGACATGAACGAGACATCCAGATTACCTGTCATGACGTTTCTCTCGTGCGAGTTCTCGACAGATCTCCTGCTCCATGCCCTCGTGATAGGTAATGTTTTCGGTTACGGCTAGTTACTTACACTTGCAATGATTGATCTTTCGGGTTCGTTCTACTCGCTTTCGTTCTTCGTCATCGTTAATCTAGGAAAGCTAGCTTTTTATAGATTTGTAATGCTTAGAAAAGAAAAAATGGTTGCATCTTTGGGCTGTTTGCTGCAGTTGTCGGTTCTATTTTGATTAACCATTGTAAGAAAATTTTGAATTCTTGTGTTATATGAGGTTAGAACTGCTGTGAACTGATGCAATTTGAAGCAAAGAAACATTCATAACTGTCCAATGGT

Coding sequence (CDS)

ATGAACTCCACCGTTTTTCTCCTCTCGTCGCCGTTGCCGCCGGCCACAATCCACCGGCTACGACCTCCTTCCATTTCCGCCGCAAGTTCTCTTCCACACCTCCTTAGTTTTCCCTACCGAAAATCTACTCCCTCTGCATCCCCCCTCTTCGTCCCTAGAAGAAACCCTTTCCGCGTCTTCTCCGATGACGGCGACGGAGATAGCGGCGGCCCCGATGACTACGATATGTACGACGACGAAATGGAAGAAGTCGACAACAAGAAAGATTTCGACATCGAGTACGATACTCTAGCCGCGGCGGCTGCGGCTGCGGCTGCGGGTTCTGAAGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTATCGACGCAGGGATGGGATTCGGAGATGATCGTGGATTATAGGATAAATGAAGAGGAGTTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCTGACAATGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCTGACACTGATGTTTATGCTATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTACGGATGCTACAATGTCACAGAACCACCCATTGATGCACCTAGAGATCCATTATACAAGTCTGAGAAGGAGGTTCTTAAGGTATTCTTGACGAAGCACTTCAGAAACCGAAGGCTGGGTGACCCGGAATTCGTCCTAGACTTCGAGGAAATATATGTGATCGATTCAAAAACTAAGTCAATCACCAGGGCTAAAGTCTTGGTCACAGTTCCAGGCGGACGAGCTAGGGACAGGAGAAGCGACTTACTTGTCGTTCGGGATAATGGGAACTCTTTCAAGATTATCCATTCGAGCGAACGAGATGATCCGACCACGGTGATAGAGAAGGAAGAGTGGACGAAAACTAGACAAGATATGGAGAGACATCTTAGAAAGCTAAGGGACTTCAGCATTTCAAATTGGTTTTAA

Protein sequence

MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

Homology

[Close]

BLAST of Cp4.1LG06g06090 vs. ExPASy Swiss-Prot
Match: Q9XI19 (PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC6 PE=1 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 1.5e-133
Identity = 241/329 (73.25%), Postives = 268/329 (81.46%), Query Frame = 0


Query: 26  SAASSLPHLLSFPYRKSTPSASP----------LFVP------RRNPFRVFSDDGDGDSG 85
           SAAS    LLSF  +   PS S           LF P      R     V  DD D D G
Sbjct: 4   SAASPSLSLLSFTSKPPYPSGSQRLFASFRTDGLFAPLTLKSRRGRGIVVKVDDVDADGG 63

Query: 86  GPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQG 145
           G D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQSKSF+STQG
Sbjct: 64  GADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGG----GDGDIAFVQSKSFISTQG 123

Query: 146 WDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVL 205
           WDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VL
Sbjct: 124 WDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVL 183

Query: 206 APMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVL 265
           APMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVL
Sbjct: 184 APMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRTNDPEFVL 243

Query: 266 DFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTV 325
           D EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTV
Sbjct: 244 DLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVGERDDPTTV 303

Query: 326 IEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           IE+EEWTKTR+DME+HLRKLRDFS+SNWF
Sbjct: 304 IEREEWTKTREDMEKHLRKLRDFSVSNWF 328

[Close]

BLAST of Cp4.1LG06g06090 vs. NCBI nr
Match: XP_023534952.1 (uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 678 bits (1749), Expect = 6.70e-246
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338

[Close]

BLAST of Cp4.1LG06g06090 vs. NCBI nr
Match: KAG6591867.1 (PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024734.1 hypothetical protein SDJN02_13552, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 669 bits (1727), Expect = 1.51e-242
Identity = 335/338 (99.11%), Postives = 335/338 (99.11%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSL HL S PYRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLPYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338

[Close]

BLAST of Cp4.1LG06g06090 vs. NCBI nr
Match: XP_022976812.1 (uncharacterized protein LOC111477076 [Cucurbita maxima])

HSP 1 Score: 663 bits (1710), Expect = 6.87e-240
Identity = 336/342 (98.25%), Postives = 336/342 (98.25%), Query Frame = 0


Query: 1   MNSTVFLLSSPLP--PATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFR 60
           MNSTVFLLSSPLP  PATIHRLRPPSISAASSLPHL S PYRKSTPSASPLFVPRRNPFR
Sbjct: 1   MNSTVFLLSSPLPLPPATIHRLRPPSISAASSLPHLPSLPYRKSTPSASPLFVPRRNPFR 60

Query: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA--GSEGVGDENI 120
           VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA  GSEGVGDENI
Sbjct: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENI 120

Query: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180
           SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT
Sbjct: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180

Query: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240
           PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH
Sbjct: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240

Query: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300
           FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
Sbjct: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300

Query: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 342

[Close]

BLAST of Cp4.1LG06g06090 vs. NCBI nr
Match: XP_022935749.1 (uncharacterized protein LOC111442572 [Cucurbita moschata])

HSP 1 Score: 660 bits (1704), Expect = 5.23e-239
Identity = 334/340 (98.24%), Postives = 334/340 (98.24%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSL HL S  YRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA--GSEGVGDENISI 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA  GSEGVGDENISI
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISI 120

Query: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180
           VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP
Sbjct: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180

Query: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240
           DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR
Sbjct: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240

Query: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300
           NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
Sbjct: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300

Query: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 340

[Close]

BLAST of Cp4.1LG06g06090 vs. NCBI nr
Match: XP_008444205.1 (PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo])

HSP 1 Score: 636 bits (1641), Expect = 1.87e-229
Identity = 321/338 (94.97%), Postives = 327/338 (96.75%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLS PLPP TI+RLR  SISAA+SLPHL S PYRKSTPSASPLF+PRRNPFRVF
Sbjct: 1   MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAAAAAAA GS+GVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAA-GSDGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 337

[Close]

BLAST of Cp4.1LG06g06090 vs. ExPASy TrEMBL
Match: A0A6J1IGR4 (uncharacterized protein LOC111477076 OS=Cucurbita maxima OX=3661 GN=LOC111477076 PE=4 SV=1)

HSP 1 Score: 663 bits (1710), Expect = 3.32e-240
Identity = 336/342 (98.25%), Postives = 336/342 (98.25%), Query Frame = 0


Query: 1   MNSTVFLLSSPLP--PATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFR 60
           MNSTVFLLSSPLP  PATIHRLRPPSISAASSLPHL S PYRKSTPSASPLFVPRRNPFR
Sbjct: 1   MNSTVFLLSSPLPLPPATIHRLRPPSISAASSLPHLPSLPYRKSTPSASPLFVPRRNPFR 60

Query: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA--GSEGVGDENI 120
           VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA  GSEGVGDENI
Sbjct: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENI 120

Query: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180
           SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT
Sbjct: 121 SIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVT 180

Query: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240
           PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH
Sbjct: 181 PPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKH 240

Query: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300
           FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK
Sbjct: 241 FRNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFK 300

Query: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 342

[Close]

BLAST of Cp4.1LG06g06090 vs. ExPASy TrEMBL
Match: A0A6J1F6A7 (uncharacterized protein LOC111442572 OS=Cucurbita moschata OX=3662 GN=LOC111442572 PE=4 SV=1)

HSP 1 Score: 660 bits (1704), Expect = 2.53e-239
Identity = 334/340 (98.24%), Postives = 334/340 (98.24%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLSSPLPPATIHRLRPPSISAASSL HL S  YRKSTPSASPLFVPRRNPFRVF
Sbjct: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLHHLPSLLYRKSTPSASPLFVPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA--GSEGVGDENISI 120
           SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAA  GSEGVGDENISI
Sbjct: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAAAGSEGVGDENISI 120

Query: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180
           VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP
Sbjct: 121 VQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPP 180

Query: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240
           DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR
Sbjct: 181 DTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFR 240

Query: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300
           NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII
Sbjct: 241 NRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKII 300

Query: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 340

[Close]

BLAST of Cp4.1LG06g06090 vs. ExPASy TrEMBL
Match: A0A1S3BAM8 (uncharacterized protein LOC103487613 OS=Cucumis melo OX=3656 GN=LOC103487613 PE=4 SV=1)

HSP 1 Score: 636 bits (1641), Expect = 9.07e-230
Identity = 321/338 (94.97%), Postives = 327/338 (96.75%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLS PLPP TI+RLR  SISAA+SLPHL S PYRKSTPSASPLF+PRRNPFRVF
Sbjct: 1   MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAAAAAAA GS+GVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAA-GSDGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 337

[Close]

BLAST of Cp4.1LG06g06090 vs. ExPASy TrEMBL
Match: A0A5A7UA32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00090 PE=4 SV=1)

HSP 1 Score: 631 bits (1628), Expect = 3.31e-227
Identity = 320/338 (94.67%), Postives = 326/338 (96.45%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAASSLPHLLSFPYRKSTPSASPLFVPRRNPFRVF 60
           MNSTVFLLS PLPP TI+RLR  SISAA+SLPHL S PYRKSTPSASPLF+PRRNPFRVF
Sbjct: 1   MNSTVFLLSLPLPPPTINRLRASSISAATSLPHLPSLPYRKSTPSASPLFLPRRNPFRVF 60

Query: 61  SDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQ 120
           SDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD LAAAAAAAA GS+GVGDENISIVQ
Sbjct: 61  SDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAA-GSDGVGDENISIVQ 120

Query: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180
           SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT
Sbjct: 121 SKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDT 180

Query: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240
           DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR
Sbjct: 181 DVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNR 240

Query: 241 RLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHS 300
           RL DPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Sbjct: 241 RLRDPEFVLDFEEIYVIDSKTKSITRARVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS 300

Query: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Sbjct: 301 SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNCF 337

[Close]

BLAST of Cp4.1LG06g06090 vs. ExPASy TrEMBL
Match: A0A2P5F197 (Plastid transcriptionally active protein OS=Trema orientale OX=63057 GN=TorRG33x02_125970 PE=4 SV=1)

HSP 1 Score: 506 bits (1303), Expect = 2.76e-178
Identity = 260/341 (76.25%), Postives = 293/341 (85.92%), Query Frame = 0


Query: 1   MNSTVFLLSSPLPPATIHRLRPPSISAA--SSLPHLLSFPYRKSTPSASPLFVPRRNPFR 60
           M +   LLSSP  P ++  L   + +++   S PHL +FP  K  PS +PL       F 
Sbjct: 1   MRAVTLLLSSP--PFSLRPLTATTSTSSFLHSPPHL-AFPPLKLKPSLNPLSPSPNRSFV 60

Query: 61  VFSDDGDGDSGGPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISI 120
           V +DDGD D GGPDDYDM D+E+EEVDNKKDFDIEYD LAAAAAA+A+   G  DE+IS+
Sbjct: 61  VRADDGDADGGGPDDYDMDDEELEEVDNKKDFDIEYDPLAAAAAASASVDVGP-DEDISM 120

Query: 121 V-QSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTP 180
           V QS++FVSTQGWDSEM+VDYRINE EFHKISL HCDFFIRKPPDPDNDVYDFREMYVTP
Sbjct: 121 VLQSETFVSTQGWDSEMVVDYRINENEFHKISLFHCDFFIRKPPDPDNDVYDFREMYVTP 180

Query: 181 PDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHF 240
           PDTDVYAIPKVLAPMPQKYIRCA+SDYG YNVTEPPIDAPRDP+YKSE+E++KVFLTKH+
Sbjct: 181 PDTDVYAIPKVLAPMPQKYIRCAKSDYGMYNVTEPPIDAPRDPMYKSEREIMKVFLTKHY 240

Query: 241 RNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKI 300
           RNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVT+P GR RDR++DLLV+RDNGNSFKI
Sbjct: 241 RNRRLGDPEFVLDFEEIYVIDSKTKSITRAKVLVTIPEGRKRDRKTDLLVIRDNGNSFKI 300

Query: 301 IHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF 338
           IHSSERDDPTTVIE+EEW K+R+DMERHLRKLRDF+ISNWF
Sbjct: 301 IHSSERDDPTTVIEREEWAKSREDMERHLRKLRDFNISNWF 337

[Close]

BLAST of Cp4.1LG06g06090 vs. TAIR 10
Match: AT1G21600.1 (plastid transcriptionally active 6 )

HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-134
Identity = 241/329 (73.25%), Postives = 268/329 (81.46%), Query Frame = 0


Query: 26  SAASSLPHLLSFPYRKSTPSASP----------LFVP------RRNPFRVFSDDGDGDSG 85
           SAAS    LLSF  +   PS S           LF P      R     V  DD D D G
Sbjct: 4   SAASPSLSLLSFTSKPPYPSGSQRLFASFRTDGLFAPLTLKSRRGRGIVVKVDDVDADGG 63

Query: 86  GPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQG 145
           G D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQSKSF+STQG
Sbjct: 64  GADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGG----GDGDIAFVQSKSFISTQG 123

Query: 146 WDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVL 205
           WDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VL
Sbjct: 124 WDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVL 183

Query: 206 APMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVL 265
           APMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVL
Sbjct: 184 APMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRTNDPEFVL 243

Query: 266 DFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTV 325
           D EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTV
Sbjct: 244 DLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVGERDDPTTV 303

Query: 326 IEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           IE+EEWTKTR+DME+HLRKLRDFS+SNWF
Sbjct: 304 IEREEWTKTREDMEKHLRKLRDFSVSNWF 328

[Close]

BLAST of Cp4.1LG06g06090 vs. TAIR 10
Match: AT1G21600.2 (plastid transcriptionally active 6 )

HSP 1 Score: 477.2 bits (1227), Expect = 1.1e-134
Identity = 241/329 (73.25%), Postives = 268/329 (81.46%), Query Frame = 0


Query: 26  SAASSLPHLLSFPYRKSTPSASP----------LFVP------RRNPFRVFSDDGDGDSG 85
           SAAS    LLSF  +   PS S           LF P      R     V  DD D D G
Sbjct: 4   SAASPSLSLLSFTSKPPYPSGSQRLFASFRTDGLFAPLTLKSRRGRGIVVKVDDVDADGG 63

Query: 86  GPDDYDMYDDEMEEVDNKKDFDIEYDTLAAAAAAAAAGSEGVGDENISIVQSKSFVSTQG 145
           G D+YDM D+E+EEVDNKKD+D+EYD LAAA AAA  G    GD +I+ VQSKSF+STQG
Sbjct: 64  GADEYDMDDEEVEEVDNKKDYDVEYDPLAAAIAAAGGG----GDGDIAFVQSKSFISTQG 123

Query: 146 WDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVL 205
           WDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VL
Sbjct: 124 WDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMYVTPPDTDIYSIPRVL 183

Query: 206 APMPQKYIRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRLGDPEFVL 265
           APMPQKYIRCA SDYGCYNVTEPPIDAPRDPLYKSE+E+ KVFLTKH+RNRR  DPEFVL
Sbjct: 184 APMPQKYIRCAMSDYGCYNVTEPPIDAPRDPLYKSEREISKVFLTKHYRNRRTNDPEFVL 243

Query: 266 DFEEIYVIDSKTKSITRAKVLVTVPGGRARDRRSDLLVVRDNGNSFKIIHSSERDDPTTV 325
           D EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTV
Sbjct: 244 DLEEIYVIDSKTKSITRARVLVTVPGGRKRDRKDDLLVIRDNGTSFKIIHVGERDDPTTV 303

Query: 326 IEKEEWTKTRQDMERHLRKLRDFSISNWF 339
           IE+EEWTKTR+DME+HLRKLRDFS+SNWF
Sbjct: 304 IEREEWTKTREDMEKHLRKLRDFSVSNWF 328

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g06090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI19	1.5e-133	73.25	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of Cp4.1LG06g06090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534952.1	6.70e-246	100.00	uncharacterized protein LOC111796527 [Cucurbita pepo subsp. pepo]	[more]
KAG6591867.1	1.51e-242	99.11	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita ar...	[more]
XP_022976812.1	6.87e-240	98.25	uncharacterized protein LOC111477076 [Cucurbita maxima]	[more]
XP_022935749.1	5.23e-239	98.24	uncharacterized protein LOC111442572 [Cucurbita moschata]	[more]
XP_008444205.1	1.87e-229	94.97	PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]	[more]

BLAST of Cp4.1LG06g06090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IGR4	3.32e-240	98.25	uncharacterized protein LOC111477076 OS=Cucurbita maxima OX=3661 GN=LOC111477076...	[more]
A0A6J1F6A7	2.53e-239	98.24	uncharacterized protein LOC111442572 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
A0A1S3BAM8	9.07e-230	94.97	uncharacterized protein LOC103487613 OS=Cucumis melo OX=3656 GN=LOC103487613 PE=...	[more]
A0A5A7UA32	3.31e-227	94.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2P5F197	2.76e-178	76.25	Plastid transcriptionally active protein OS=Trema orientale OX=63057 GN=TorRG33x...	[more]

BLAST of Cp4.1LG06g06090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21600.1	1.1e-134	73.25	plastid transcriptionally active 6	[more]
AT1G21600.2	1.1e-134	73.25	plastid transcriptionally active 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044710	PLASTID TRANSCRIPTIONALLY ACTIVE protein 6	PANTHER	PTHR35994	EXPRESSED PROTEIN	coord: 11..338

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g06090.1	Cp4.1LG06g06090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex