Cp4.1LG06g06070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATGGTCCACAAGAACATTTTCCCATTTGAGCAATGCAAAATGGGGCAAATGTGCACTTTCAATGGTGCCCTTAAAAGGTACTAAGTTCCCCATAAAATGGATGCATAGAATTTCCCATGCGCACTTCCAATGGTGCCCATAAAGTACTTCCATATCTTCCATGAAATGATTATTATTGTGCATTTTTTTAGTTCCAATGGACATTGATGGAATAGGGTATAGAAGAGATTGAAAAAAAGGAGAACTTTTCCTCTATTGAAGGAGATTTCATTTAGTGTAAATTACTTTCTTTAACTTCTTTACTTTAGAATCATACATCTAATCTTATAATTTGACTGATATACCCAATACTTTCTTCCATTAAAGAATAGAATGAAGGGATTAAAAGGTAAAAAAAAGGTGGGGAAAGTAATAAATTTCAAATAGATGAAACTTTCCATGTGAATACTCTAATTTCCTTAAGGAAATAGGAAAAGTTACAGTCTTCGGATTGAAACGTGTGAATCTGTTGGATTCACCATTTACAGACTCTCCTTCATGGGGTCCTTACTTTACTACTTACTCAACAGTTAAAAAAAAAAGAGAGAAATTTAACCATTACAAAAGTTACTGAAGCTATAAGAGAGAAGTGCAGTAGGGATTGCATTTATGGGTGTTGTTTTGTGGTCGTTCTTGTTCAGCAGCGTAGTAATAATTTAATGACGAAGGTAAATTTTGAATTGAATTAGTAGATGGTTTGAAAAGGCTTAATTGACTTGGAATCTTGAATAACTCCAGCTACAGATCCAGATGCTGCTGCAATGGTGATTATGAGGCAAGCCAAGCTGAGAATTTGGAGGCTGACCCATCTTGTGCTCCATTTTGGGATCTTCATTTGTGCAATGTACATTTCAACAGGGAAGTAGACAGTGAGAGGCCAAAATCCCAAGGCTCCGAGAAGTCCGACGATGTCGTTGAAGAACGGGAGGAGCATCGAGATGATAGTGGTGATGATCACGAAGATTGTCCTCCAAACTAACCTGAAGAGGTTGAGTTTCAAGGAGCGAAAGCCTGGGATTGGGATACTGATGTCTTCGTTGATGAATTGACTATCTGGGAATCGGTTTGACGCGAATTTCTCGATGAAAGCAAAGAGCGGTTGGCAAAAAACTTGATACGCACCGACAAGATGGACAACAATGGCTACGTTCGCTATGTCGAGAAGCCAAAACGGGTTGTAGAAGCCGAAACCAGTGAGGAGATTGCCAGGAGCAAAGTCTCCAAAGGCTGCATAACCCATACACCCACACA GATGGTCCACAAGAACATTTTCCCATTTGAGCAATGCAAAATGGGGCAAATGTGCACTTTCAATGGTGCCCTTAAAAGCTACAGATCCAGATGCTGCTGCAATGGTGATTATGAGGCAAGCCAAGCTGAGAATTTGGAGGCTGACCCATCTTGTGCTCCATTTTGGGATCTTCATTTGTGCAATGTACATTTCAACAGGGAAGTAGACAGTGAGAGGCCAAAATCCCAAGGCTCCGAGAAGTCCGACGATGTCGTTGAAGAACGGGAGGAGCATCGAGATGATAGTGGTGATGATCACGAAGATTGTCCTCCAAACTAACCTGAAGAGGTTGAGTTTCAAGGAGCGAAAGCCTGGGATTGGGATACTGATGTCTTCGTTGATGAATTGACTATCTGGGAATCGGTTTGACGCGAATTTCTCGATGAAAGCAAAGAGCGGTTGGCAAAAAACTTGATACGCACCGACAAGATGGACAACAATGGCTACGTTCGCTATGTCGAGAAGCCAAAACGGGTTGTAGAAGCCGAAACCAGTGAGGAGATTGCCAGGAGCAAAGTCTCCAAAGGCTGCATAACCCATACACCCACACA ATGGTCCACAAGAACATTTTCCCATTTGAGCAATGCAAAATGGGGCAAATGTGCACTTTCAATGGTGCCCTTAAAAGCTACAGATCCAGATGCTGCTGCAATGGTGATTATGAGGCAAGCCAAGCTGAGAATTTGGAGGCTGACCCATCTTGTGCTCCATTTTGGGATCTTCATTTGTGCAATGTACATTTCAACAGGGAAGTAGACAGTGAGAGGCCAAAATCCCAAGGCTCCGAGAAGTCCGACGATGTCGTTGAAGAACGGGAGGAGCATCGAGATGATAGTGGTGATGATCACGAAGATTGTCCTCCAAACTAA MVHKNIFPFEQCKMGQMCTFNGALKSYRSRCCCNGDYEASQAENLEADPSCAPFWDLHLCNVHFNREVDSERPKSQGSEKSDDVVEEREEHRDDSGDDHEDCPPN Homology
BLAST of Cp4.1LG06g06070 vs. NCBI nr
Match: BAS75576.1 (Os01g0882900, partial [Oryza sativa Japonica Group]) HSP 1 Score: 62.4 bits (150), Expect = 1.14e-08 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. NCBI nr
Match: KAB8084618.1 (hypothetical protein EE612_007205, partial [Oryza sativa]) HSP 1 Score: 61.2 bits (147), Expect = 2.92e-08 Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. NCBI nr
Match: KAB8114528.1 (hypothetical protein EE612_053998, partial [Oryza sativa]) HSP 1 Score: 55.8 bits (133), Expect = 2.38e-06 Identity = 34/67 (50.75%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. NCBI nr
Match: BAT78679.1 (hypothetical protein VIGAN_02139000 [Vigna angularis var. angularis]) HSP 1 Score: 52.4 bits (124), Expect = 3.32e-06 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. NCBI nr
Match: BAT13040.1 (Os11g0195650, partial [Oryza sativa Japonica Group]) HSP 1 Score: 54.7 bits (130), Expect = 5.15e-06 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. ExPASy TrEMBL
Match: A0A0P0VB87 (Os01g0882900 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0882900 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.54e-09 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. ExPASy TrEMBL
Match: A0A0S3RDM5 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G139000 PE=4 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 1.61e-06 Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. ExPASy TrEMBL
Match: A0A0P0Y029 (Os11g0195650 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0195650 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.49e-06 Identity = 32/63 (50.79%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. ExPASy TrEMBL
Match: A0A0P0WML0 (Os05g0424100 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0424100 PE=4 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 1.24e-05 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 0
BLAST of Cp4.1LG06g06070 vs. ExPASy TrEMBL
Match: A0A0P0X247 (Os07g0134101 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0134101 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 4.32e-04 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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