Cp4.1LG06g04950 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g04950
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dehydration-responsive element-binding protein 3-like
Location	Cp4.1LG06: 2944013 .. 2944594 (-)
RNA-Seq Expression	Cp4.1LG06g04950
Synteny	Cp4.1LG06g04950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGCAACACAACCATCACAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTACCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACACCAGAGATGGCCGCTAGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCTGTCTCCTTCGCCCCTCGCGATGTTCAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCTTAATAACGAGTTCGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCATGGTTACGAACCATGGACGATTGCAGCTACAACCACAACGACGACGAGATGGGAATTGGGGACAGCAATTTCTTATGGGATTATTAA

mRNA sequence

ATGTCAGCAACACAACCATCACAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTACCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACACCAGAGATGGCCGCTAGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCTGTCTCCTTCGCCCCTCGCGATGTTCAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCTTAATAACGAGTTCGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCATGGTTACGAACCATGGACGATTGCAGCTACAACCACAACGACGACGAGATGGGAATTGGGGACAGCAATTTCTTATGGGATTATTAA

Coding sequence (CDS)

ATGTCAGCAACACAACCATCACAAATCACCCAACCATCCTCCTCTGACACCAACGCCCAATCCAACCCCAACAACAAGCGCGTTCGTGATTCCAGCAAGCACCCACTCTACCGCGGCGTAAGAATGCGCGCTTGGGGCAAATGGGTGTCCGAAATCCGCGAGCCTCGCAAGAAATCCCGCATTTGGTTAGGAACCTTCCCCACACCAGAGATGGCCGCTAGAGCCCACGACGTTGCTGCCTTGTCCATCAAAGGTAATTCCGCTATTCTCAACTTCCCTGAACTCGCTCACTCCCTTCCCCGCCCTGTCTCCTTCGCCCCTCGCGATGTTCAAGCCGCCGCTGCCAAGGCCGCCCACATGGACCCTTTTCAATACTCCACCGACGACTCCGACGAGCTCAGCGAAATCGTCAAGCTGCCTAGTCTCACCACCAATTACCTTAATAACGAGTTCGTCCTCATGGACTCCACCGATGGCTGGGTTTACCCGCCCCCATGGTTACGAACCATGGACGATTGCAGCTACAACCACAACGACGACGAGATGGGAATTGGGGACAGCAATTTCTTATGGGATTATTAA

Protein sequence

MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHNDDEMGIGDSNFLWDY

Homology

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy Swiss-Prot
Match: Q9LYD3 (Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=DREB3 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.3e-52
Identity = 117/203 (57.64%), Postives = 132/203 (65.02%), Query Frame = 0


Query: 7   SQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTF 66
           S+    S      QS    KR RDS KHP+YRGVRMR WGKWVSEIREPRKKSRIWLGTF
Sbjct: 21  SESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 80

Query: 67  PTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDP---F 126
           PTPEMAARAHDVAALSIKG +AILNFPELA S PRPVS +PRD+Q AA KAAHM+P   F
Sbjct: 81  PTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSF 140

Query: 127 QYSTD-----------------------DSDELSEIVKLPSLTTNY------LNNEFVLM 178
             ST                        +S+EL EIV+LPSL  +Y      L NEFV  
Sbjct: 141 SSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFY 200

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy Swiss-Prot
Match: Q39127 (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN=TINY PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 7.1e-48
Identity = 107/191 (56.02%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 7   SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLG 66
           S+ T+   +    Q N   K+  V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 67  TFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQ 126
           TFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP S +PRD+Q AA KAAHM+  Q
Sbjct: 64  TFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQ 123

Query: 127 ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMD 167
                                    S   S+EL EIV+LPSL ++Y     L NEF+  D
Sbjct: 124 SFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSD 183

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy Swiss-Prot
Match: Q9M080 (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 GN=ERF043 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.6e-45
Identity = 105/214 (49.07%), Postives = 130/214 (60.75%), Query Frame = 0


Query: 24  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 83
           ++K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SI
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 84  KGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD---------- 143
           KG SAILNFPEL+  LPRPVS +PRDV+AAA KAA MD     F+  T+           
Sbjct: 66  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMS 125

Query: 144 ---------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWV 194
                                      SD+L EIVKLPSL T+   +NEFV+ DS +  V
Sbjct: 126 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVIFDSLEDLV 185

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy Swiss-Prot
Match: Q52QU1 (Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 GN=ERF042 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-41
Identity = 104/223 (46.64%), Postives = 128/223 (57.40%), Query Frame = 0


Query: 15  SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR 74
           SDT   S    ++ ++     +YRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAAR
Sbjct: 7   SDTECSSKKKKEKTKEKG---VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAAR 66

Query: 75  AHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD- 134
           AHDVAALSIKG+SAILNFPELA  LPRPVS + +D+QAAAA+AA MD    PF    D  
Sbjct: 67  AHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDST 126

Query: 135 ------------------------------------SDELSEIVKLPSLTTNYLNNEFVL 194
                                               S EL +IV+LPSL  N +  +  L
Sbjct: 127 PLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENN-VKYDCAL 186

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy Swiss-Prot
Match: O80654 (Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 GN=ERF037 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.0e-39
Identity = 108/228 (47.37%), Postives = 129/228 (56.58%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           +S  Q S + +      + Q +      +     P YRGVRMR WGKWVSEIREPRKKSR
Sbjct: 7   ISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSR 66

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LPRP S +PRDVQAAAA AA M
Sbjct: 67  IWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAM 126

Query: 121 D-------------------------PFQYST--------------DDSDELSEIVKLPS 180
           D                            YST                ++ELSEIV+LPS
Sbjct: 127 DFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPS 186

Query: 181 LTTNYLN--NEFVLMDSTDGWVYPP--PWLRTMDDC-SYNHNDDEMGI 185
           L T+Y    +EFV +DS     YPP  PW   +++C S+ ++ DE GI
Sbjct: 187 LETSYDESLSEFVYVDS----AYPPSSPWY--INNCYSFYYHSDENGI 228

[Close]

BLAST of Cp4.1LG06g04950 vs. NCBI nr
Match: XP_023535238.1 (dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396 bits (1017), Expect = 3.60e-139
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR
Sbjct: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM
Sbjct: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120

Query: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHNDD 180
           DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHNDD
Sbjct: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHNDD 180

Query: 181 EMGIGDSNFLWDY 193
           EMGIGDSNFLWDY
Sbjct: 181 EMGIGDSNFLWDY 193

[Close]

BLAST of Cp4.1LG06g04950 vs. NCBI nr
Match: XP_022936152.1 (dehydration-responsive element-binding protein 3-like [Cucurbita moschata])

HSP 1 Score: 381 bits (979), Expect = 2.68e-133
Identity = 190/198 (95.96%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR
Sbjct: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM
Sbjct: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120

Query: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHND- 180
           DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDD SYN+N+ 
Sbjct: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNN 180

Query: 181 ----DEMGIGDSNFLWDY 193
               DEMGIGDSNFLWDY
Sbjct: 181 NNIIDEMGIGDSNFLWDY 198

[Close]

BLAST of Cp4.1LG06g04950 vs. NCBI nr
Match: KAG7024616.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381 bits (978), Expect = 3.95e-133
Identity = 190/199 (95.48%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR
Sbjct: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM
Sbjct: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120

Query: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHND- 180
           DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDD SYN+N+ 
Sbjct: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNN 180

Query: 181 -----DEMGIGDSNFLWDY 193
                DEMGIGDSNFLWDY
Sbjct: 181 NNNIIDEMGIGDSNFLWDY 199

[Close]

BLAST of Cp4.1LG06g04950 vs. NCBI nr
Match: KAG6591735.1 (Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378 bits (970), Expect = 6.78e-132
Identity = 188/200 (94.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR
Sbjct: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM
Sbjct: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120

Query: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHND- 180
           DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRT+DD SYN+N+ 
Sbjct: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTIDDSSYNNNNN 180

Query: 181 ------DEMGIGDSNFLWDY 193
                 D+MGIGDSNFLWDY
Sbjct: 181 NNNNIIDQMGIGDSNFLWDY 200

[Close]

BLAST of Cp4.1LG06g04950 vs. NCBI nr
Match: XP_022976323.1 (dehydration-responsive element-binding protein 3-like [Cucurbita maxima])

HSP 1 Score: 372 bits (954), Expect = 2.23e-129
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDT------NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIRE 60
           MSATQPSQITQPSSSDT      NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIRE
Sbjct: 1   MSATQPSQITQPSSSDTTFNSSNNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIRE 60

Query: 61  PRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAA 120
           PRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSA LNFPELAHSLPRPVSFAPRDVQAAA
Sbjct: 61  PRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSATLNFPELAHSLPRPVSFAPRDVQAAA 120

Query: 121 AKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCS 180
           AKAAHMDPFQYSTDDSDELSEIVKLPSL+TNYLNNEFVLMDSTDGWVYPPPWLRTMDDCS
Sbjct: 121 AKAAHMDPFQYSTDDSDELSEIVKLPSLSTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCS 180

Query: 181 YNHND------DEMGIGDSNFLWDY 193
           Y +N+      DEMGIGDSNFLWDY
Sbjct: 181 YYNNNNNNNIIDEMGIGDSNFLWDY 205

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy TrEMBL
Match: A0A6J1F7M6 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111442837 PE=4 SV=1)

HSP 1 Score: 381 bits (979), Expect = 1.30e-133
Identity = 190/198 (95.96%), Postives = 192/198 (96.97%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR
Sbjct: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM
Sbjct: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120

Query: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSYNHND- 180
           DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDD SYN+N+ 
Sbjct: 121 DPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDSSYNNNNN 180

Query: 181 ----DEMGIGDSNFLWDY 193
               DEMGIGDSNFLWDY
Sbjct: 181 NNIIDEMGIGDSNFLWDY 198

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy TrEMBL
Match: A0A6J1ILS4 (dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111476756 PE=4 SV=1)

HSP 1 Score: 372 bits (954), Expect = 1.08e-129
Identity = 188/205 (91.71%), Postives = 191/205 (93.17%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDT------NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIRE 60
           MSATQPSQITQPSSSDT      NAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIRE
Sbjct: 1   MSATQPSQITQPSSSDTTFNSSNNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIRE 60

Query: 61  PRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAA 120
           PRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSA LNFPELAHSLPRPVSFAPRDVQAAA
Sbjct: 61  PRKKSRIWLGTFPTPEMAARAHDVAALSIKGNSATLNFPELAHSLPRPVSFAPRDVQAAA 120

Query: 121 AKAAHMDPFQYSTDDSDELSEIVKLPSLTTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCS 180
           AKAAHMDPFQYSTDDSDELSEIVKLPSL+TNYLNNEFVLMDSTDGWVYPPPWLRTMDDCS
Sbjct: 121 AKAAHMDPFQYSTDDSDELSEIVKLPSLSTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCS 180

Query: 181 YNHND------DEMGIGDSNFLWDY 193
           Y +N+      DEMGIGDSNFLWDY
Sbjct: 181 YYNNNNNNNIIDEMGIGDSNFLWDY 205

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy TrEMBL
Match: A0A6J1FNI3 (dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111446782 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 4.42e-87
Identity = 143/199 (71.86%), Postives = 159/199 (79.90%), Query Frame = 0


Query: 6   PSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGT 65
           P+Q   P+SS++++ S    KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGT
Sbjct: 8   PTQSISPTSSNSSSSS----KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGT 67

Query: 66  FPTPEMAARAHDVAALSIKGN-SAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQ 125
           FPTPEMAARAHDVAALSIKGN SAILNFPELAHSLPRP SFAPRD+QAAAAKAAHMDP Q
Sbjct: 68  FPTPEMAARAHDVAALSIKGNNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQ 127

Query: 126 YST-----DDSDELSEIVKLPSLTTNYL----NNEFVLMDSTDG-WVYPPPWLRTMDDCS 185
           YS      DDSD+L+EI+KLP+L TNY     NNEFVLMDS++  W YPPPW+RTM+D +
Sbjct: 128 YSASSAAPDDSDDLAEIIKLPNLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTT 187

Query: 186 YNHNDDEMGIGDSNFLWDY 193
                      D NFL DY
Sbjct: 188 E----------DGNFLRDY 192

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy TrEMBL
Match: A0A6J1J127 (dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111480318 PE=4 SV=1)

HSP 1 Score: 261 bits (667), Expect = 2.86e-86
Identity = 137/178 (76.97%), Postives = 147/178 (82.58%), Query Frame = 0


Query: 26  KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 85
           KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG
Sbjct: 18  KRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKG 77

Query: 86  N-SAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQYST----DDSDELSEIVKLP 145
           N SAILNFPELAHSLPRP SFAPRD+QAAAAKAAHMDP QYS     DDSD+L+EI+KLP
Sbjct: 78  NNSAILNFPELAHSLPRPASFAPRDIQAAAAKAAHMDPSQYSASAADDDSDDLAEIIKLP 137

Query: 146 SLTTNYL----NNEFVLMDSTDG-WVYPPPWLRTMDDCSYNHNDDEMGIGDSNFLWDY 193
           +L TNY     NNEFVLMDS++  W YPPPW+RTM+D +           D NFL DY
Sbjct: 138 NLGTNYDHSIGNNEFVLMDSSESCWAYPPPWVRTMEDTAE----------DGNFLRDY 185

[Close]

BLAST of Cp4.1LG06g04950 vs. ExPASy TrEMBL
Match: A0A0A0LHV3 (AP2 domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G895680 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 3.18e-83
Identity = 142/199 (71.36%), Postives = 156/199 (78.39%), Query Frame = 0


Query: 24  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 83
           NNKRVR S    +YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI
Sbjct: 31  NNKRVRPSDS--IYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 90

Query: 84  KGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD-PFQYST--------------- 143
           KGNSAILNFPELAHSLPRPVSFAPRD+QAAA+KAAHMD  F YS+               
Sbjct: 91  KGNSAILNFPELAHSLPRPVSFAPRDIQAAASKAAHMDFNFHYSSTSSSSVSTSLSPSSP 150

Query: 144 -DDSD--ELSEIVKLPSL-TTNYLNNEFVLMDSTDGWVYPPPWLRTMDDCSY----NHND 193
            DD D  ELSEIVKLP+L ++NY ++EFVLMDST+GWVYPPPWLRTM+D  Y    N+ +
Sbjct: 151 EDDEDGHELSEIVKLPTLASSNYDDHEFVLMDSTEGWVYPPPWLRTMEDYYYGYHTNNIN 210

[Close]

BLAST of Cp4.1LG06g04950 vs. TAIR 10
Match: AT5G11590.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 8.9e-54
Identity = 117/203 (57.64%), Postives = 132/203 (65.02%), Query Frame = 0


Query: 7   SQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTF 66
           S+    S      QS    KR RDS KHP+YRGVRMR WGKWVSEIREPRKKSRIWLGTF
Sbjct: 21  SESDSVSDKSKAEQSEKKTKRGRDSGKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTF 80

Query: 67  PTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDP---F 126
           PTPEMAARAHDVAALSIKG +AILNFPELA S PRPVS +PRD+Q AA KAAHM+P   F
Sbjct: 81  PTPEMAARAHDVAALSIKGTAAILNFPELADSFPRPVSLSPRDIQTAALKAAHMEPTTSF 140

Query: 127 QYSTD-----------------------DSDELSEIVKLPSLTTNY------LNNEFVLM 178
             ST                        +S+EL EIV+LPSL  +Y      L NEFV  
Sbjct: 141 SSSTSSSSSLSSTSSLESLVLVMDLSRTESEELGEIVELPSLGASYDVDSANLGNEFVFY 200

[Close]

BLAST of Cp4.1LG06g04950 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 191.8 bits (486), Expect = 5.1e-49
Identity = 107/191 (56.02%), Postives = 123/191 (64.40%), Query Frame = 0


Query: 7   SQITQPSSSDTNAQSNPNNKR--VRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLG 66
           S+ T+   +    Q N   K+  V+DS KHP+YRGVR R WGKWVSEIREPRKKSRIWLG
Sbjct: 4   SESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWLG 63

Query: 67  TFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMDPFQ 126
           TFP+PEMAARAHDVAALSIKG SAILNFP+LA S PRP S +PRD+Q AA KAAHM+  Q
Sbjct: 64  TFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDIQVAALKAAHMETSQ 123

Query: 127 ------------------------YSTDDSDELSEIVKLPSLTTNY-----LNNEFVLMD 167
                                    S   S+EL EIV+LPSL ++Y     L NEF+  D
Sbjct: 124 SFSSSSSLTFSSSQSSSSLESLVSSSATGSEELGEIVELPSLGSSYDGLTQLGNEFIFSD 183

[Close]

BLAST of Cp4.1LG06g04950 vs. TAIR 10
Match: AT4G32800.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 6.8e-46
Identity = 105/214 (49.07%), Postives = 130/214 (60.75%), Query Frame = 0


Query: 24  NNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSI 83
           ++K  ++++K P+YRGVRMR+WGKWVSEIREPRKKSRIWLGTFPT EMA RAHDVAA+SI
Sbjct: 6   SDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAMRAHDVAAMSI 65

Query: 84  KGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD---------- 143
           KG SAILNFPEL+  LPRPVS +PRDV+AAA KAA MD     F+  T+           
Sbjct: 66  KGTSAILNFPELSKLLPRPVSLSPRDVRAAATKAALMDFDTTAFRSDTETSETTTSNKMS 125

Query: 144 ---------------------------SDELSEIVKLPSLTTNY-LNNEFVLMDSTDGWV 194
                                      SD+L EIVKLPSL T+   +NEFV+ DS +  V
Sbjct: 126 ESSESNETVSFSSSSWSSVTSIEESTVSDDLDEIVKLPSLGTSLNESNEFVIFDSLEDLV 185

[Close]

BLAST of Cp4.1LG06g04950 vs. TAIR 10
Match: AT2G25820.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.1e-42
Identity = 104/223 (46.64%), Postives = 128/223 (57.40%), Query Frame = 0


Query: 15  SDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAAR 74
           SDT   S    ++ ++     +YRG RMR+WGKWVSEIREPRKKSRIWLGTFPT EMAAR
Sbjct: 7   SDTECSSKKKKEKTKEKG---VYRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAAR 66

Query: 75  AHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHMD----PFQYSTDD- 134
           AHDVAALSIKG+SAILNFPELA  LPRPVS + +D+QAAAA+AA MD    PF    D  
Sbjct: 67  AHDVAALSIKGSSAILNFPELADFLPRPVSLSQQDIQAAAAEAALMDFKTVPFHLQDDST 126

Query: 135 ------------------------------------SDELSEIVKLPSLTTNYLNNEFVL 194
                                               S EL +IV+LPSL  N +  +  L
Sbjct: 127 PLQTRCDTEKIEKWSSSSSSASSSSSSSSSSSSSMLSGELGDIVELPSLENN-VKYDCAL 186

[Close]

BLAST of Cp4.1LG06g04950 vs. TAIR 10
Match: AT1G77200.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 4.3e-40
Identity = 108/228 (47.37%), Postives = 129/228 (56.58%), Query Frame = 0


Query: 1   MSATQPSQITQPSSSDTNAQSNPNNKRVRDSSKHPLYRGVRMRAWGKWVSEIREPRKKSR 60
           +S  Q S + +      + Q +      +     P YRGVRMR WGKWVSEIREPRKKSR
Sbjct: 7   ISVKQSSPVPEEEDHHHHQQDSHRTNTKKRVRSDPGYRGVRMRTWGKWVSEIREPRKKSR 66

Query: 61  IWLGTFPTPEMAARAHDVAALSIKGNSAILNFPELAHSLPRPVSFAPRDVQAAAAKAAHM 120
           IWLGTF TPEMAARAHD AAL+IKG SA+LNFPELA  LPRP S +PRDVQAAAA AA M
Sbjct: 67  IWLGTFSTPEMAARAHDAAALTIKGTSAVLNFPELATYLPRPASSSPRDVQAAAAVAAAM 126

Query: 121 D-------------------------PFQYST--------------DDSDELSEIVKLPS 180
           D                            YST                ++ELSEIV+LPS
Sbjct: 127 DFSPSSSSLVVSDPTTVIAPAETQLSSSSYSTCTSSSLSPSSEEAASTAEELSEIVELPS 186

Query: 181 LTTNYLN--NEFVLMDSTDGWVYPP--PWLRTMDDC-SYNHNDDEMGI 185
           L T+Y    +EFV +DS     YPP  PW   +++C S+ ++ DE GI
Sbjct: 187 LETSYDESLSEFVYVDS----AYPPSSPWY--INNCYSFYYHSDENGI 228

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g04950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LYD3	1.3e-52	57.64	Dehydration-responsive element-binding protein 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q39127	7.1e-48	56.02	Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M080	9.6e-45	49.07	Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q52QU1	2.9e-41	46.64	Ethylene-responsive transcription factor ERF042 OS=Arabidopsis thaliana OX=3702 ...	[more]
O80654	6.0e-39	47.37	Ethylene-responsive transcription factor ERF037 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG06g04950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535238.1	3.60e-139	100.00	dehydration-responsive element-binding protein 3-like [Cucurbita pepo subsp. pep...	[more]
XP_022936152.1	2.68e-133	95.96	dehydration-responsive element-binding protein 3-like [Cucurbita moschata]	[more]
KAG7024616.1	3.95e-133	95.48	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
KAG6591735.1	6.78e-132	94.00	Dehydration-responsive element-binding protein 3, partial [Cucurbita argyrosperm...	[more]
XP_022976323.1	2.23e-129	91.71	dehydration-responsive element-binding protein 3-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG06g04950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7M6	1.30e-133	95.96	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1ILS4	1.08e-129	91.71	dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1FNI3	4.42e-87	71.86	dehydration-responsive element-binding protein 3-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1J127	2.86e-86	76.97	dehydration-responsive element-binding protein 3-like OS=Cucurbita maxima OX=366...	[more]
A0A0A0LHV3	3.18e-83	71.36	AP2 domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G895680...	[more]

BLAST of Cp4.1LG06g04950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11590.1	8.9e-54	57.64	Integrase-type DNA-binding superfamily protein	[more]
AT5G25810.1	5.1e-49	56.02	Integrase-type DNA-binding superfamily protein	[more]
AT4G32800.1	6.8e-46	49.07	Integrase-type DNA-binding superfamily protein	[more]
AT2G25820.1	2.1e-42	46.64	Integrase-type DNA-binding superfamily protein	[more]
AT1G77200.1	4.3e-40	47.37	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 37..48 score: 70.15 coord: 59..75 score: 66.52
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 36..99 e-value: 9.7E-37 score: 138.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 35..85 e-value: 4.2E-14 score: 52.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 36..93 score: 23.327345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 35..95 e-value: 3.42895E-34 score: 113.906
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 36..94 e-value: 1.7E-24 score: 87.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 129..186
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 9..125
None	No IPR available	PANTHER	PTHR31985:SF177	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE	coord: 129..186
None	No IPR available	PANTHER	PTHR31985	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED	coord: 9..125
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 36..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g04950.1	Cp4.1LG06g04950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity