Cp4.1LG06g04180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g04180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WD and tetratricopeptide repeats protein 1-like
Location	Cp4.1LG06: 2596156 .. 2609129 (-)
RNA-Seq Expression	Cp4.1LG06g04180
Synteny	Cp4.1LG06g04180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAATTCGAAATTATAACTTATATATAAAAAAAATTATTATGTAAGTGACATTATTGATATATTTTGAGACAATATATAATGGTAATATCGAGTATACCTTTTATTATAATTATTTTTATAATTTATTTTAACTTTTTTTTTTGTGTAATATATTTTAATATTAATTTGAAATTAAACCGATAAAATTTAATGTAACCTAATACTGATAAAATAAAATAACTAAATTTTAATTCCCTCTTCATTAATTATTTGTCACACGAGCTTCTTCTATTTCGCACGCAGAGCTCTCTCTATAAATACTTGGACAGACTTCAGAGACGGTTCCCGGCTTGGGGAGCGCGAAAATTGTAGAATGATCGGAACCTTCACTGCTGCAACTGCAGATTATTGGTCGGAGATTGATCACCGCTAGGGTTTCTCTGAGTTATCTCTAATCTCATGGAGGACTTCGCCTTTCACGATGGTAACGTTTGCGGTTTGCTCGAGAGCAGGCACATCAACTTTCGTCAAGTATGTCTGATTAATTTATTTTTTCCTTTCATACCTTCTCATCGAGGTCGCATTTGTTCAACTTCAAGTGTCGAGTTACTTGAATTGTTTTATTGTATTGGATGTGAATTGGCGGCGTGTTTGGTTGTTGTAGCGTGAGCGTACTTTCGCGAGGAGGAGATTGTTAGCGTGAATTTTAGATATATCGTTCTCCTTATTTGATTTAGTTGAATTGTTTTGTTGGAGGTGAAGCGAGAAGTATATTGATATGAGATGAACGTAAGAGGTTTCGGATTGTTTGAAGGCTGTCTTTGGACGATAAGCAATGCTATTTTGGTTCTGTCGATTTGAAAGTTTCCGAAATTGCTAAAATAAACTCTCATTCGACTGCGCCTATTCTTCTTTGGTCATTTTCCTTGATGCGTCATGAGTCGAAGCATGATAATAATAGTAAGGCCTTTGATTGTGATCTTTATTGTTTCCATTCGGACTCTTGACACTGGAAGCATCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTTAGGCATGAGCTATTGCAGTTTGGCTGTTCATAAAAAATTTCCGGATTAAATTATATTTTTATGTTCTCACTCTTTCATTCTCTTTTCTATAGAACACGACAGACAGCATAGTTTTGACGATTAATAAGTTATTCATTCATCGATAAATATATAAGGAAGAATCTATCTATATAAAAACCAGACTATACGTATATATAATAAGAGTAAGGAGGTCTAGGTTCCAAAAGAAAAGAACACTTGCTCTTTTCTTACTTTAAAGTTTATGTTTAGCCTTAATTTCTTGGTGGCTCGTTTTACATATTATAATTTTTCAATGGTTGTAAATTAGTCTTGCATTCTGAAGGTTGGGGAAATTTGTTATTTGTTTTAATTAATATAGAAACGTAAAGGTCTGCTTGAAATCGTCCATAGTGAAGCTTTTAATTTTCTCTCTTATGAATTTGTTTCATTTTTCCAAGTCATATATGTTTGCAGGATCCCACCTATAGTTTGCCGATGCACTCATCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGGTCTGTATGGATTTAAGTTTCTATCCCCTGTGATTTCTTAACATTGTTCTATCCACTTTGTGATGCTTGCTTTACTGTAAACTTTATGTTCTACATTCTGTCATGCATGGTGTACCTGGTAATAGTATAATTATCCATGTCATTTGGCATTGTGTTTTATGGTCTGTTTCATGTCATTTAAAATGCCTGCACAAGCATCTGATATACAGCTGGATTTCTTTCCCGTTTATTGTAGAGATAAAAACACTTCTTAATATGTTAAAAGATTGAGGTGTGGTCTCTTGTTAGATTTTAATGTTTTCCTCTGGACATTAGTTACTAAAGCTTTTTGCGAGTACCTTTGGGTTTCGTTGTTTCATATTGAACCCCTGTCTTGTGTAGTTTGGGGTTTAGGCACCCCTTTTGGTGGCTGTTTTTGTTTTCCATTTTGTCCTCTTTCACTTCTACTTGATGAAAAGAAATTTTCTCATTAAAAAACATGTTGATGGAGGATAAGTGGCCCATTTCTTTCAATTGGAGTTCATTTCTTATTTGTTGTCTTAAGCTGGATGAACAGTAGTTATTGACTATCATATTAACATGGTAGAGAAATGGAACTCTGAAATGGGGTTCATAATTTACCTGATGGAGTTAGTCTTCAGTTCTTCAAGAACTGAGACATTTGTTCAAACTCATGAAACGGACACTACTACTTACACTCCATGATCTAGTTTGTGTGTTTATTTTTCCAAATTCTGTGCAAATGTTGTTTTTCCTCCCATCCCTTTCATTTCCATATTCTTTGCTCTCTCTATCTGTCATTCCAGTTTCGTAAATTAAATTCTGCTCCCCCCCACCTCCCAAACTCTCTCCAGGGGCACCAGGGGTGTGTCAATGCAGTGGCCTGGAATTCTCGTGGTTCGCTTTTGATATCTGGATCAGATGATACGCGGGTAAGATAGTTTCCCTTCAGTTCTATGACTTAATTATCTAAGATCTGCAGTAGCCTGTGGATGACTCATGTTTTTCTTTTGGTGGTGGACAAGCTTTGTCGTTGGACTGTGTGTAGTGAATACTAGGTTGTTATTCTTGAAGATTGAATCAACGAACTTTTCTTTTTTGGTTTAAATTTGTGGCCCTTTATGTGAATATGTTAGTATTTATTGCGCATATTACTGAATGTTCTTTCCTGTGACAACAATTTTTAGTAAAAGAATTTAAGCCAATGATGCCCGTAGTAAAGTTGAACTAAATGCATGCTTGTATAAATCTGACTCTATTTTTATGGAGAAAGGTATCCTATGTTGATAACCTTACCCATGCGGCAAGTGTGATTATTGCAGGTGGTGGTGCATGCAGATTGAAATAGAAATGCCTAAAATCTGAAATCCAAGTTAGTTAATTTGTCCTGCATGTAGGATAAGTCTTCAGATGCCTAAAATTTGAGTAGAGGATATGTTTTCTTACAGTTAGATATTTAGACGGCGAATGTTATTTCTATCAAATTTATGGATATTATTAGTTTCTAAACTCTTCAGATTTGACTTATCAAATTTGCTCTCAAGAATTTTTCTTTATATGGACAATAAAAAAAAAGGAAAAATAGAGTTTTAGAACTTGATAATGAAGATAGCACCAAAGAAAGAGATAGCCCTGGATATCTCATCTGATTTTTGTTGGACTTGATGTAGTTAAAGCAGTAATGATAAATTGACACCGAAGGATTGGCATGTTTCTTCCTGACCTGTTAGATGATAATTGATTTATGTGTATTTGTATTGCAAAATGCCTTACTGTTACTCTTTTTTACTAACCTCCATCCGCTAAAGAAAAATTAAGTTTTCTTGAAGTTTTTTGTTAATCATATATATATATTTGTGTAGATCAACATTTGGAGCTATTCTGGTCAAAAGCTATTGCACTCTGTGGAAACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACTTCTGATGAGCTTGTGGTCTCAGGAGCTGGGGATGCAGAGGTGTAATAGGCTGTAGTGTAAAATTTTCATGAATGTTTGTACTTGCAGTTGGATTTTGCTCACTACTTTTTATGGAGTTGGGTTTTTTTTTTTTTTTTTTTTTTTACAGGTGCGATTGTTTAATTTATCTCGCTTGAAAGGGAGAAGACATGATGATAGTCCCATAGCTTCATCTGCTTTATATCAGTGTCACACCAGAAGAGTAAAAAAATTAGCTGTAAGAGTTATGAACTCAATGGGAAATATATATTGAAAATTTCTTCTACTAGACGTAATGAAATAATTTATTCATTATGAACAACCAGGTTACGTTCTAGTAATTATAGGTTAAATAATATGTTTATCGTTTTGACAAGGTTTGTCTTCAATTCGTTGAAGGTTGAAATAGGGAATCCAAATGTAGTATGGAGTGCTAGTGAGGATGGGACTCTTAGACAGCATGACTTTCGAGAGGGGATGTCCTGTTCTCCCGAGGGAGCTTCTCACCAAGAATGTCACAATGTTCTTGTAAGTATTGCTTTCTCTTGAATTTTCTGTTTTGTGAAAACACCCATCATATCCGGGAAACTTGAGTTAATGGGTTATGGTAAATTTAATCTTATGTCAATACTTTGACCTTTCTTTTGACACTCCTTCTCATTTGTGGGCTTAAAAATTTATTTAAGGCCCAACGAGTAGTTTTTAATTTTAATTGAGGACGAAATGACATTACAAGGGTTAAGCTAGTGGGTTACGGTAAATTGAATCTTATATAATTACTTTGACATCACTTTTGACACTTCCATTCAATGAACAAGATCAAGAGATGCCGGTCTGCTTGTTTTCCTAACATTTCTTGCCTTTTGACAATGTTCAAGCTAAATGGACAATGCAACAATTTCACGTTTTTGGGTAGTGGTGCGGGAGGGGTTAGCTGTGATGCTCAATTCAGTATTATGGCAGCAGCATTTACTATGTTTTATGTACTCATAAAAATGACCATTTTGAAAAAAAATTAGTTGCATTAATTAATGAGATAGCGTGTTTGGTTATATGATAGTTAACAAGCCTTGCTAACATGAGCTTAGTTCAACGATTAAGATATTTCTATTTCTATTTCTTTTAGGAGTTTGTAGGTTTAAATTCCTCTACGCCACATCTGATGCAATATTCTATATAAAAAAAAAAGCAACAAGCCTTAAAAGAGGCTTATTCAAAAATTTTAACCGCAATAGTTGATTACAACATTTTATTATTTTTTTTTAAATTTTTTTTTTATTTATAGAAATGGCATCAGTTATTGGGTTCATTGTTTTCACATTAAACTCATTGTCAGATTGATTTGCGGTGTGGAGCAAAGAGGTCACTTGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACATTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGGTATTCTGCAATTGTTAACCCTTTGCGTAGAGGAATTGCTTAAAAGGAAGTAGAAGTAAAAGAGCCTAATTGTTCCTCTTCAACTTCTTTTAATTCCTATTTGCAGTGACGCATTTGCACGGTTATATGATAGAAGGATGTTGCCACCCTTGTCGTCCAGCCAGAAAAGGATGTCGCCACCTCCTTGTGTTAACTACTTTTGCCCAATGCATCTCTCTGAACGGGTGTGTTCAGAAATTGTTTTTTATTAATCATGGTGCATATCAATCTGGCTACAAAATGTTGTTATTGCTTGATTGTAGAAACACAATCGAATAGTATATACTCTACAAAGTCAATTTAGCGTATGCAAAATATGATATAAAGACAGTTTTTATGGTCAATATGAATCTGCACAACCCATGATTTTGATGCAGGTCTCAAATGTTTCTCTCTACTTGGGGGAAAAAAAAAACGTTCATTCATGTTAATCTGACGTCATTGTTATTAGTAATAAAATGAGAATTCACTATTTATTCATGCATACTCAGCAGTACAGTATGATTGTCAACAAAATTCTCTCGGCATGATACTATCCTAATAGACTATTCCGATTAGAAGAATCTCATTTTGTTGTTGTTGTATATGTTTGTTTTTTTAAAAAGGAAACGATGTTGTTTTAAAACATACGATTGCTAATTCTAATTCTAACCTTCTCTGGTTGTACCAATTCAGACTTCTGATCTTATACTCTCTCTGTTTTCATAGGTTCGACCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATCCTTCTTAGCTATAGTGGAGAACATGTATACTTGATGAATGTAAATCATGGTATCTTAATTTGTCTTAAAATTTAAGCTTCTTATGCATTTCCTTTTTTTTTTTTTTTTATCAATCGTTCTGATTTATTTTAAATTTACAATCAGTGTTTTATTTATTAGTTAGATAATGGAAGAGAATTGATGGATTTTGTTTTAAATTTACAGTAAAATGTTATTTTATGTAATTAACATGTATAATGGCTGTTTCGAAACTAAGATGTGATGATTTCTTAGGAAAGGATCATATTTTGAATTTTCTGTTTTAGTTTACAATCATTGTTTTATTTATTAGTTAGATAATGGCATTTACCGTATTTGTGAAACCATATTTTTATATTTAATGTGTTTCGATTTAGTTCTGTCGAATTGCATTTATATATTTTTCCCCACAGCTGGTTTAGGTACAATGCAGTATACATCAGGAGATGTTTCTAAATTAATGAGTTTCACTCCCATACTCAACGGATTGGAATTGCAGCATCCTGTTCCGAATCTTTCTAACGGCTTGCCTTTAAATGGTGGTGTTAATGCGAAGGTGCGACTCTCAAACAAATGCTATAATTGAACAATCTTATTGCTCGAATGGTTCAAAGGTTTAATTTAACAAGTATTTTTCAGCTTGATAAATGCAGAAAATTATTACAAATTGCTGAAAAATGCTTGGAGGGTGGCAACTACTTCGGTGGAATTGAGGCATGTAATGAAATTTTGGATGGATTTGGTCGTATTATTGGAGTTATTCTCAAGCACGATTCATTATGCACACGTGCTGCTTTATTGCTCAAGGTAATGCGTTATATTTATTGCTTCAAATTCATGTTCCATTTCAAATTTATGTATCCCAACCTATCTTTTGTCCTTTTTTTTTTTCGTATCTAGTACCAAGAGACAGATATTTGTGGGGTTGGATGTTATGGAGATTCCTTGAGGAATCACATATTTAGGCTAGTAAATGAAACAAGCTTTTCTTTTTCCAAATATATTCCTAAAGGAGCCAATGTCATTTTTTCGAAAAGAAATTTAAAATATCTTCTAATCTCATTTGATGGTTTTTTTTTTTNTCCAGAAATCTTTTTAATCTTCTTTCCCTTGTGATTATTCACCATCTCCCGATCATAAGTTGTTCGTTTGGTCCAATAGCCCCATCATCTTCTCATTTTCTTTTAATATAATTCAACTTCCAAAAGAAAGTTCAAGACGTCACGATTTATGGATTCTTAATCTTCTCTTTTTTATATTATTTATTTTTATTATCATCACAGCATAAGTTTGAAGAGTTCCATTAGCTGTTTTCTCTCTGAGGGGCAGAATAGAATTACTATATACTTTTGAACTGCTGCTTCATAGTTGTTTGGTGATGTTAATTTTTCAGTAGTCAGGAACATCTGTGGTGATGTGCTATTTTCCTGTTTCCTTTTGATACTTTATATGTATTCAAGTTCAGGTGGAGGGCCCTTTTCCTCATTACTTTCTTTTATGAACTCTTACATGCTAGTATCTTCTTTGGTTTCTAATTGAGAAAAGCTGAAATCTTTTTCAGCGGAAGTGGAAAAATGATGTTCATATGGCCATAAGAGATTGTTACAGTGCTAGGAAAATAGATAATTCTTCTTTCAGAGCACATTACTACATGTGTGAAGCTCTATCACAGGTAATTTTTATGTCATTCTGTTCTACCGCTTGCTGCAGTTTTCTTTCTTTGGGAACTATCTCGTACAATCTTTTTTCTCGTTTAATATAAAATTATTTGAAATTTTTTTTAATTTTCATGTTGGTCTTTATCTATGTGTGGAAGTTAAGACTGTTTGTTGTGGTCGTTTGGTTCATATAAAGTTATATATATATATATATATATATATATTCTGTTTACAAGTTGTGAAAAATTCAATCCTTCTTTTTTTTCATTTTCCCTTCTTCTCTTGCAGCTAGGTAGACATAAGGAAGCCCTAGATTTTGCCTTTGCTGCTCAGTGTTTAGCCCCATCTAATCCCGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGACCTCGCTGCAGGTAAATGGTAGTCTAGAACTTGTAATTTCATTTGGTTCATATTTATCTTGGAGTGGAGGTCTGGGAGAACTTGCACACCAAAACTCCTTCCAGTGGAGGATTGTGGGATTTAAATGAACATATTGCTGTTGAATGTCTGTACCCACCAACATTTGCTAGTTTCTTCTCATTATTATTTTTTAAAGAAGAATAGTTGAAAGAAGGTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCACCCTTTATAAGGGTATGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCCGCTAGCGGTGGATCTGGGTCATTACAAATGATATTAGAGCTAGACATCAGACGATGTGCTAGCCTTCTCGCTGTTCCCCGAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGCCCCAAAAGGGAGTGGATTTAGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAATGCCAGCGAGGACGCTAGGCCCCAAAGAGGAGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCACCCTTTATAAGAGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTATAGAAGGAATCAACTGTTGTTGTTAACTGAAATTAGCATGGTTTTTGTTGACTATTTGTATATTTATTTTTAATTAAGGATGGATTGACGTCCATCGTAACATTATACTAGTTTTTGCTGCGCAAATTGGAAAGATATCTCGAGATCTCTTTATGATTGAAAATATTTTTTTTTTGTCTGATAAGGGTATATGTTTTTGCTGGGCAAATTGGGAAGATATTCAACTTGTTTCAACAGTTTTGCATCTTGCCATCTCCTTCTCATTTTTGGCTTTTGATTTATTTGATTTTATATTATAACCAGCTGAATTGGAAAAATCAAATAAAGACAATGATGGAGCTATAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACCTTCTTCACCGCTCAGATGCAAACAGTGATGTTTCACAAGATGGGGTGAGATCAGAAAGAGAAGATTCTGACTATGATGACGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCAAGACGTCGATTCTAACGTTCTACATGGAAGTGTAAATCTTAGAATACATAGACGAGTTGATCCAGCAATAGAAAGGGTTGGCGCGAATGGCTCCTGTGGGTCTCCTTCATCGTCACACAATGATGGAATACTCTATCAGGTTCTAGTAATACTTTGACAGAATCTTCTATACATTTACCTTTAGTTGATGATGTCTTCATTCCGACTAAGCTTTGTGTTACATTACATGCAGCCTGAACCTGTCATTGATATGAAGCAAAGATATGTCGGTCATTGCAATATCGGAACTGATATTAAACAAGCTAGTTTTCTTGGGCAAAGAGGTATTAACTGAACCATGGGAATGGCTAATTGTGTTACAAGTTGATTAAATTTTAGGTTCATGTGATCTCTTTAGAGTGGGTCCTATATGGGGGTGTGAGATGGTACCATTATTTCCTATGCCATGATTATTGTCATAGGAGCCCAATTTTTTACAGACACAGCCATGATTATTGCAGGTCACAACACAGTCGTTTCCTTGTTTTATATATCGTCCCCATTTCTCTACGAGGAAATTGCAACCTCTCTTTTCCCTATAGAATTCTTTTAACTTTTTTCCTCCAAATCTCCTAAAGAATAGCTTTGAACGTTAATGGATTAGATTGAATTGTGCTGTAAATGATGGTGTATTGCAGTGTCGGTTGAAGGGCAACGTCTTCGTTTGTGTTAAAATATAATTGCCAAATTTGGTTTTTAGAAACAAGCATAGGTCGTTAAAATGATAAATACTTGTGATAATTTGGGAAGTTGATCTCTGTAAAATGATATTTGCAGGTGAATATGTTGCCAGTGGAAGTGATGACGGGAGATGGTTTATTTGGGAGAAGAAAACTGGTAGACTGATTAAAATTCTTGTTGGAGATGGAGCTGGTAAATACCATCCAAATAATTTTATAGATGAATAATTTGTTTTCAATTACCAAAACCGAAACTGAAGTACGAATTTTCTCTTCATACACTTTTTCAGTTGTGAATTGCGTCCAGAGTCATCCATTTGATTGTGCCATTGCTACTAGCGGGATCGATAATACCATTAAGGTACGTATGTATGTACGAGTGTTGACAATTCCATAAATGACCTTTTTTTTTTGTTTGTTTCGGAGCTGTTTTGGCAGGACGTACTAAACCCACTTTGTACCACACCACCGGGTGGCTTGTCGAATGCCTCATCTCTCTTATCTCTCAGTTATTGATGACCTCCTCCTTTGTTGTCACAGCTATGGACTCCAACTGCTCCAGTCCGATCAGTCGTAGCCGGTGGAGGGATTGGACCGCAGGCTGCCGATGTGTTGGCTGCAATAGAGAACAATCAGCGCCGACTCTGCCGTAATAGAGAAGCCATACTGTAAGCCCCTCGTGGATTCCTTGACCTTCATAATATAGGATTTGTTAATTATTATATGCATTGTTTTGTTGGTCTTAATTAATTATCTAATTAGTTTAAAAAACACTAAGCTTTCACGAAGATAGATGAAAGAATGTAATATATGGAATCTTGACAGTAATTAACTTATCAGAGAATGTTTACCGTACGAGTTCCGCTATCATTATACATGGTATATATAAGTTTTCAATATCCTAAATAGCCTCTGTAGGAGATTTGGACCCATTCTCCAGAATCTTTAGGCCAACCCAACCCCATTGCTCTTATCAGAAATAAGATTAGATATCGAACGAGGTGTTTCCCTAATCATAATATATCGAATACGTGGAAATCTTTCCCTATGTTCAACTATGTTGGTACGTACCATTGTATGTTAATGTTCATATTTTCATTGTGTGTGGTGCTGGCTGCGGGCAGGCCTTTTGAAATTTTAGAGCGGTTTAGGATGCATGATTTCTCAGAAGGAAGCCTTCATCCATTTGAATGTGCTCAGAGTTGATGATATGTAGGGGATGCACGCAGGTAAGTGTGACTATGTTTTTGTTTTTCGAAGTTTTAGTTAGTGTTGGACTATTTGTTTAGAGCTTGTTTACTATACCCCTTCGGCCCTTCTAATTTTTTTCGTTTTTTTCCGTTGTAAGTTCGGTTTCTTATCCCAAAAAAAAAGAACAAAAAAACCATTATATATATGTCTCAAGTTCTTTTTTTTCTTTTTAGCACCACAATTTGCGTGTGCATCTTTATTTCATAATTATGTACAATCTTTGAATTTTTATTATTTTTTAATGTTTTTAATTTTTGACAGAAATTGGAATAGTGATAGTTGGTGGAGTAGCAGTTAGCACACCGAACATTTTGTTCTAACAGACACTCCTATGAGAAGTCTGGTTCAAGCTCTCTTAATATAGAACATTTACCAGCCAAGCTAGTACTATTCAATTTTTGTTCTTTCTATTGCCTTGTAAATTATTGTAAATTTTGCTGCATTTTTTTTTTCCTTTGACAATTTGCTGTTTTTGCCATTACAATTTCCTTGCTTATTTTCTTTTTTTTCTTTTCGCTTTCTTTTATATGCGGTGTTAATGTTGTAATGTACAGAATAAGATGAAGCAGGAAGCGGGCAAATCAAGTTCAAGTATGTATATCATGTTATCTGGTCTTTCTTCCCATTTTGAGCATGCATTTTTGGATGTATAGTAAATAATTTCAACAGAATCAAAGAAAACGATACACATATTTACAAAAATCACACTTTTCTTTTATATAAAAATTAAAAAAAACATCTCTAAAAATTTAAATATATCTGGCCAGTTTAAGGAAATATTTCAAGAAAGTAAACCAATCAAAATAACTAACAACTAACCTATATTCCATTTGTCTAACATTCCTGTTAAAAAAAATTACTGAAAAAAGCTTAATTTTTTACGATTATGTGTGGATTTATTTTGATAGTAAAAAAATGGTTATTACAAACACTGTTATTAGTATTCACATTTAATAGGCATAATTTTTCTAAATGATATCATCCACATATTTCCGGTGTTTTCCCATGCGAAGTTGTCCTCCCATTAGTGTTCTCTCTCTCCCTTCATTTACTACATTGATTTAATGTTAATATTGTTACTTAATATGGCCCTGTTGAAGTGATGAGGAATGATAATGAGAAGGTGAATAATCAACCTCAGGTGGGTGGAGTATGGATTTTGGGAAGCATGTCGAAGTGTTAATAATACATGCTTTAGAAATTGTACACATCCTATACAATTTCAGACTCCCTATTGCTTCCACTGGTTGAGCAAGATCACACTGTTGTGCGGGAAGAATTATCATTAGTTACTGCACTGCAGGAATGCCCTTTACTACCCCCTAAAGAAGGAAGAGCTCCCTGTCCCTCCCTAGTGGCATTCAAGCCAGGTTTCATGAATGGATCGAGAATTGTCATGAAAATTTGGTCCATGAATTTATTGAATTCATTTGGTTCATCTTCCATATTGGTATGTTCTCTCATCTCGTACCTGATCTTCATTCATGTATGAGCATTAGTGGTATGTTCCATATTGTCATATTGTGTTTACCTCGAGTTAAATAATGTTCCTCCAGATCTGGCATTCGATATCAGTAAACAAGAGAGAGATTAGGAGGAGGCAGGGGTTGTAGAGGTGGCATTAAAAGCTTTGGTGACATCTGTGGGTCTTGCTGTCCGTTGGAGGGTTGATGAACTAAGAGATCCAAGAACATTATTATCCTTTCTCTAAGATCATTAATAGCAAGGGGATCGTTGTAGGTAATCGATCTTACAAGAAACTTTTGTTTTTCGTGATTCACATGGGAGGTGGTCTAGGCCATTGATGAAAGGGCTAAAAACCGAGTAGGATTCTTCTCTTCCCCTAAAAATGATAATGTTTCTTTCTTTCTAATCAGAGGA

mRNA sequence

ATTTAATTCGAAATTATAACTTATATATAAAAAAAATTATTATTATATAATGGTAATATCGAGTATACCTTTTATTATAATTATTTTTATAATTTATTTTAACTTTTTTTTTTGTGTAATATATTTTAATATTAATTTGAAATTAAACCGATAAAATTTAATGTAACCTAATACTGATAAAATAAAATAACTAAATTTTAATTCCCTCTTCATTAATTATTTGTCACACGAGCTTCTTCTATTTCGCACGCAGAGCTCTCTCTATAAATACTTGGACAGACTTCAGAGACGGTTCCCGGCTTGGGGAGCGCGAAAATTGTAGAATGATCGGAACCTTCACTGCTGCAACTGCAGATTATTGGTCGGAGATTGATCACCGCTAGGGTTTCTCTGAGTTATCTCTAATCTCATGGAGGACTTCGCCTTTCACGATGGTAACGTTTGCGGTTTGCTCGAGAGCAGGCACATCAACTTTCGTCAAGATCCCACCTATAGTTTGCCGATGCACTCATCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTTTCGTAAATTAAATTCTGCTCCCCCCCACCTCCCAAACTCTCTCCAGGGGCACCAGGGGTGTGTCAATGCAGTGGCCTGGAATTCTCGTGGTTCGCTTTTGATATCTGGATCAGATGATACGCGGATCAACATTTGGAGCTATTCTGGTCAAAAGCTATTGCACTCTGTGGAAACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACTTCTGATGAGCTTGTGGTCTCAGGAGCTGGGGATGCAGAGATTGATTTGCGGTGTGGAGCAAAGAGGTCACTTGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACATTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGACGCATTTGCACGGTTATATGATAGAAGGATGTTGCCACCCTTGTCGTCCAGCCAGAAAAGGATGTCGCCACCTCCTTGTGTTAACTACTTTTGCCCAATGCATCTCTCTGAACGGGTTCGACCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATCCTTCTTAGCTATAGTGGAGAACATGTATACTTGATGAATGTAAATCATGCTGGTTTAGGTACAATGCAGTATACATCAGGAGATGTTTCTAAATTAATGAGTTTCACTCCCATACTCAACGGATTGGAATTGCAGCATCCTGTTCCGAATCTTTCTAACGGCTTGCCTTTAAATGGTGGTGTTAATGCGAAGCTTGATAAATGCAGAAAATTATTACAAATTGCTGAAAAATGCTTGGAGGGTGGCAACTACTTCGGTGGAATTGAGGCATGTAATGAAATTTTGGATGGATTTGGTCGTATTATTGGAGTTATTCTCAAGCACGATTCATTATGCACACGTGCTGCTTTATTGCTCAAGCGGAAGTGGAAAAATGATGTTCATATGGCCATAAGAGATTGTTACAGTGCTAGGAAAATAGATAATTCTTCTTTCAGAGCACATTACTACATGTGTGAAGCTCTATCACAGCTAGGTAGACATAAGGAAGCCCTAGATTTTGCCTTTGCTGCTCAGTGTTTAGCCCCATCTAATCCCGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGACCTCGCTGCAGCTGAATTGGAAAAATCAAATAAAGACAATGATGGAGCTATAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACCTTCTTCACCGCTCAGATGCAAACAGTGATGTTTCACAAGATGGGGTGAGATCAGAAAGAGAAGATTCTGACTATGATGACGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCAAGACGTCGATTCTAACGTTCTACATGGAAGTGTAAATCTTAGAATACATAGACGAGTTGATCCAGCAATAGAAAGGGTTGGCGCGAATGGCTCCTGTGGGTCTCCTTCATCGTCACACAATGATGGAATACTCTATCAGCCTGAACCTGTCATTGATATGAAGCAAAGATATGTCGGTCATTGCAATATCGGAACTGATATTAAACAAGCTAGTTTTCTTGGGCAAAGAGGTGAATATGTTGCCAGTGGAAGTGATGACGGGAGATGGTTTATTTGGGAGAAGAAAACTGGTAGACTGATTAAAATTCTTGTTGGAGATGGAGCTGTCCGATCAGTCGTAGCCGGTGGAGGGATTGGACCGCAGGCTGCCGATGTGTTGGCTGCAATAGAGAACAATCAGCGCCGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGGTTTAGGATGCATGATTTCTCAGAAGGAAGCCTTCATCCATTTGAATGTGCTCAGAGTTGATGATATGTAGGGGATGCACGCAGAAATTGGAATAGTGATAGTTGGTGGAGTAGCAGTTAGCACACCGAACATTTTGTTCTAACAGACACTCCTATGAGAAGTCTGGTTCAAGCTCTCTTAATATAGAACATTTACCAGCCAAGCTAGTACTATTCAATTTTTGTTCTTTCTATTGCCTTGTAAATTATTGTAAATTTTGCTGCATTTTTTTTTTCCTTTGACAATTTGCTGTTTTTGCCATTACAATTTCCTTGCTTATTTTCTTTTTTTTCTTTTCGCTTTCTTTTATATGCGGTGTTAATGTTGTAATGTACAGAATAAGATGAAGCAGGAAGCGGGCAAATCAAGTTCAAGTGGGTGGAGTATGGATTTTGGGAAGCATGTCGAAGTGTTAATAATACATGCTTTAGAAATTGTACACATCCTATACAATTTCAGACTCCCTATTGCTTCCACTGGTTGAGCAAGATCACACTGTTGTGCGGGAAGAATTATCATTAGTTACTGCACTGCAGGAATGCCCTTTACTACCCCCTAAAGAAGGAAGAGCTCCCTGTCCCTCCCTAGTGGCATTCAAGCCAGGTTTCATGAATGGATCGAGAATTGTCATGAAAATTTGGTCCATGAATTTATTGAATTCATTTGGTTCATCTTCCATATTGATCTGGCATTCGATATCAGTAAACAAGAGAGAGATTAGGAGGAGGCAGGGGTTGTAGAGGTGGCATTAAAAGCTTTGGTGACATCTGTGGGTCTTGCTGTCCGTTGGAGGGTTGATGAACTAAGAGATCCAAGAACATTATTATCCTTTCTCTAAGATCATTAATAGCAAGGGGATCGTTGTAGGTAATCGATCTTACAAGAAACTTTTGTTTTTCGTGATTCACATGGGAGGTGGTCTAGGCCATTGATGAAAGGGCTAAAAACCGAGTAGGATTCTTCTCTTCCCCTAAAAATGATAATGTTTCTTTCTTTCTAATCAGAGGA

Coding sequence (CDS)

ATGGAGGACTTCGCCTTTCACGATGGTAACGTTTGCGGTTTGCTCGAGAGCAGGCACATCAACTTTCGTCAAGATCCCACCTATAGTTTGCCGATGCACTCATCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTTTCGTAAATTAAATTCTGCTCCCCCCCACCTCCCAAACTCTCTCCAGGGGCACCAGGGGTGTGTCAATGCAGTGGCCTGGAATTCTCGTGGTTCGCTTTTGATATCTGGATCAGATGATACGCGGATCAACATTTGGAGCTATTCTGGTCAAAAGCTATTGCACTCTGTGGAAACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACTTCTGATGAGCTTGTGGTCTCAGGAGCTGGGGATGCAGAGATTGATTTGCGGTGTGGAGCAAAGAGGTCACTTGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACATTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGACGCATTTGCACGGTTATATGATAGAAGGATGTTGCCACCCTTGTCGTCCAGCCAGAAAAGGATGTCGCCACCTCCTTGTGTTAACTACTTTTGCCCAATGCATCTCTCTGAACGGGTTCGACCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATCCTTCTTAGCTATAGTGGAGAACATGTATACTTGATGAATGTAAATCATGCTGGTTTAGGTACAATGCAGTATACATCAGGAGATGTTTCTAAATTAATGAGTTTCACTCCCATACTCAACGGATTGGAATTGCAGCATCCTGTTCCGAATCTTTCTAACGGCTTGCCTTTAAATGGTGGTGTTAATGCGAAGCTTGATAAATGCAGAAAATTATTACAAATTGCTGAAAAATGCTTGGAGGGTGGCAACTACTTCGGTGGAATTGAGGCATGTAATGAAATTTTGGATGGATTTGGTCGTATTATTGGAGTTATTCTCAAGCACGATTCATTATGCACACGTGCTGCTTTATTGCTCAAGCGGAAGTGGAAAAATGATGTTCATATGGCCATAAGAGATTGTTACAGTGCTAGGAAAATAGATAATTCTTCTTTCAGAGCACATTACTACATGTGTGAAGCTCTATCACAGCTAGGTAGACATAAGGAAGCCCTAGATTTTGCCTTTGCTGCTCAGTGTTTAGCCCCATCTAATCCCGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGACCTCGCTGCAGCTGAATTGGAAAAATCAAATAAAGACAATGATGGAGCTATAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACCTTCTTCACCGCTCAGATGCAAACAGTGATGTTTCACAAGATGGGGTGAGATCAGAAAGAGAAGATTCTGACTATGATGACGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCAAGACGTCGATTCTAACGTTCTACATGGAAGTGTAAATCTTAGAATACATAGACGAGTTGATCCAGCAATAGAAAGGGTTGGCGCGAATGGCTCCTGTGGGTCTCCTTCATCGTCACACAATGATGGAATACTCTATCAGCCTGAACCTGTCATTGATATGAAGCAAAGATATGTCGGTCATTGCAATATCGGAACTGATATTAAACAAGCTAGTTTTCTTGGGCAAAGAGGTGAATATGTTGCCAGTGGAAGTGATGACGGGAGATGGTTTATTTGGGAGAAGAAAACTGGTAGACTGATTAAAATTCTTGTTGGAGATGGAGCTGTCCGATCAGTCGTAGCCGGTGGAGGGATTGGACCGCAGGCTGCCGATGTGTTGGCTGCAATAGAGAACAATCAGCGCCGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGGTTTAGGATGCATGATTTCTCAGAAGGAAGCCTTCATCCATTTGAATGTGCTCAGAGTTGA

Protein sequence

MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPETSDELVVSGAGDAEIDLRCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPNLSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANSDVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKKTGRLIKILVGDGAVRSVVAGGGIGPQAADVLAAIENNQRRLCRNREAILPFEILERFRMHDFSEGSLHPFECAQS

Homology

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BLAST of Cp4.1LG06g04180 vs. ExPASy Swiss-Prot
Match: Q94BQ3 (Protein ALTERED SEED GERMINATION 2 OS=Arabidopsis thaliana OX=3702 GN=ASG2 PE=1 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 1.4e-223
Identity = 430/784 (54.85%), Postives = 513/784 (65.43%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYS----LPMHSSFIQRLSQEKELEFRKLNSAPP 60
           M++ +FHDGN+  LL +R     QDP++     +  HSS ++RLSQE+ELE         
Sbjct: 1   MDNLSFHDGNIFNLLHTR----SQDPSHEVDQRMQFHSSLVRRLSQEQELE--------- 60

Query: 61  HLPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTK 120
                  GHQGCVNA+AWNS GSLLISGSDD RINIW+YS +KLLHS++TGH+ANIFCTK
Sbjct: 61  -------GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTK 120

Query: 121 FVPETSDELVVSGAGDAEI----------------------------------------- 180
           FVPETSDELVVSGAGDAE+                                         
Sbjct: 121 FVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNP 180

Query: 181 --------------------------------------DLRCGAKRSLADPPRQTLALKS 240
                                                 DLR GAKR+LADPP+QTL+LKS
Sbjct: 181 NVVWSASEDGTLRQHDFRESTSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKS 240

Query: 241 CDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGL 300
           CDIS+TRPHLLLVGGSDAFARLYDRRMLPPL+SS+KRM PPPCVNYFCPMHLSER R  L
Sbjct: 241 CDISATRPHLLLVGGSDAFARLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNL 300

Query: 301 HLTHVTFSPNGEEILLSYSGEHVYLMNVNH--AGLGTMQYTSGDVSKLMSFTPILNGLEL 360
           HLTHVTFSPNGEE+LLSYSGEHVYLMNVN+     G MQYT GDV  L SF+  L+ +E 
Sbjct: 301 HLTHVTFSPNGEEVLLSYSGEHVYLMNVNNGICSTGIMQYTPGDVDNLFSFSNNLHDVES 360

Query: 361 QHPVPNL-SNGLPLNGGVNAKLDKCRKLLQIAEKCL-EGGNYFGGIEACNEILDGFGRII 420
              V     NG   +    A + KC +L++IA+  L EG + F  IEA NE+LD     I
Sbjct: 361 PPQVSTTPQNGFHRSSNA-ATVKKCTELVEIAKWSLEEGTDVFYAIEAANEVLDAHSNDI 420

Query: 421 GVILKHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHK 480
              L+H+ LCTRAALLLKRKWKND HMA+RDC++AR+ID SSF+AHYYM EAL QLG+ K
Sbjct: 421 ESALRHECLCTRAALLLKRKWKNDAHMAVRDCHNARRIDASSFKAHYYMSEALQQLGKCK 480

Query: 481 EALDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDL 540
           EALDFA AAQ + PS+ ++  KVES+KRDL AA  EK+ +   G  R      VLSLSD+
Sbjct: 481 EALDFATAAQHMNPSDADIVAKVESIKRDLQAAGAEKNEETGAGTTR------VLSLSDI 540

Query: 541 LHRSDANSDVSQDGVRSEREDSDYDDEVELDFET-LSGDEAQDVDSNVLHGSVNLRIHR- 600
           L+RS+ANSD S D  RSEREDSDYD+E+ELD +T LS DE +D DSN + GS+NLRIHR 
Sbjct: 541 LYRSEANSDSSHDMSRSEREDSDYDEELELDIQTSLSDDEGRDTDSNSMRGSLNLRIHRV 600

Query: 601 RVDPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRG 660
             D  +E    N S G+ SSS ND   YQPE  IDMK+RYVGHCN+GTDIKQASFLGQRG
Sbjct: 601 GDDKPMENTVDNASSGTASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRG 660

Query: 661 EYVASGSDDGRWFIWEKKTGRLIKILVGD------------------------------- 665
           EY+ASGSDDGRWFIWEK+TGRL+K+LVGD                               
Sbjct: 661 EYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPT 720

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BLAST of Cp4.1LG06g04180 vs. ExPASy Swiss-Prot
Match: Q8N5D0 (WD and tetratricopeptide repeats protein 1 OS=Homo sapiens OX=9606 GN=WDTC1 PE=1 SV=2)

HSP 1 Score: 188.0 bits (476), Expect = 3.5e-46
Identity = 177/634 (27.92%), Postives = 260/634 (41.01%), Query Frame = 0


Query: 58  LPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKF 117
           L   LQGH GCVN + WN +G LL SGSDD    +W     K L S+ TGH+ANIF  KF
Sbjct: 39  LEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKF 98

Query: 118 VPETSDELVVSGAGDAEI------------------------------------------ 177
           +P   D ++++GA D+++                                          
Sbjct: 99  LPHAGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGL 158

Query: 178 ----DLRCGAKRS-----LADPPRQTLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLP 237
               DLR  +K S     L +   Q +  K   ++    + L VG S  F RLYD RM+ 
Sbjct: 159 IRQYDLRENSKHSEVLIDLTEYCGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIH 218

Query: 238 PLSSSQKRMSPPPCVNYFC-------------------PMHL---SERVRPGLHLTHVTF 297
               S K+ SP   V+ FC                   P+ L   + R+R  L  T+VTF
Sbjct: 219 NHRKSMKQ-SPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRV-LVATYVTF 278

Query: 298 SPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN-LS 357
           SPNG E+L++  GE VYL ++ +       YT     K  S   + NG    + V N +S
Sbjct: 279 SPNGTELLVNMGGEQVYLFDLTYK---QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVS 338

Query: 358 NGLPLNGGVNAKLDKCR-------KLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVI 417
           NGL L+     +L + R       +L    E+  +  N     +   + +  + + +   
Sbjct: 339 NGLHLHSN-GFRLPESRGHVSPQVELPPYLERVKQQANEAFACQQWTQAIQLYSKAV-QR 398

Query: 418 LKHDSLC--TRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKE 477
             H+++    RAA  +KRKW  D + A+RDC  A  ++    +AH+ +   L +L    E
Sbjct: 399 APHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAE 458

Query: 478 ALDFAFAAQCLAPSNPEVAEKVES-----VKRDLAAAELEKSNKDNDGAIRSAPLGGVLS 537
           AL      +CL     +  E+  S     + RD+ AA   K    NDG  +  P GG   
Sbjct: 459 AL------ECLDDFKGKFPEQAHSSACDALGRDITAALFSK----NDGEEKKGPGGG--- 518

Query: 538 LSDLLHRSDANSDVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRI 597
            + +  RS            + R+DS  +DE+ L                          
Sbjct: 519 -APVRLRS------------TSRKDSISEDEMVL-------------------------- 578

Query: 598 HRRVDPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQ 604
                                           E   D + RY GHCN  TDIK+A+F G 
Sbjct: 579 -------------------------------RERSYDYQFRYCGHCNTTTDIKEANFFGS 582

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BLAST of Cp4.1LG06g04180 vs. ExPASy Swiss-Prot
Match: Q80ZK9 (WD and tetratricopeptide repeats protein 1 OS=Mus musculus OX=10090 GN=Wdtc1 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.3e-45
Identity = 175/641 (27.30%), Postives = 256/641 (39.94%), Query Frame = 0


Query: 58  LPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKF 117
           L   LQGH GCVN + WN +G LL SGSDD    +W     K L S+ TGH+ANIF  KF
Sbjct: 39  LEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKF 98

Query: 118 VPETSDELVVSGAGDAEI------------------------------------------ 177
           +P   D ++++GA D+++                                          
Sbjct: 99  LPHAGDRILITGAADSKVHVHDLTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGL 158

Query: 178 ----DLRCGAKRS-----LADPPRQTLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLP 237
               DLR  +K S     L +     +  K   ++    + L VG S  F RLYD RM+ 
Sbjct: 159 IRQYDLRENSKHSEVLIDLTEYCGPMVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIH 218

Query: 238 PLSSSQKRMSPPPCVNYFC-------------------PMHL---SERVRPGLHLTHVTF 297
               S  R SP   V+ FC                   P+ L   + R+R  L  T+VTF
Sbjct: 219 NHRKSM-RQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNSRLRV-LVATYVTF 278

Query: 298 SPNGEEILLSYSGEHVYLMNVNH----------AGLGTMQYTSGDVSKLMSFTPILNGLE 357
           SPNG E+L++  GE VYL ++ +              +++  +G +S       + NGL 
Sbjct: 279 SPNGTELLVNMGGEQVYLFDLTYKQRPYTFLLPRKCHSVEVQNGKMSTNGVSNGVSNGLH 338

Query: 358 LQHPVPNLSNGLPL---NGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGR 417
           L       SNG  L    G ++ +++    L ++ ++  E         AC +       
Sbjct: 339 LH------SNGFRLPESKGCISPQVELPPYLERVKQQANEA-------FACQQWTQAIQL 398

Query: 418 IIGVILK--HDSLC--TRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALS 477
               + K  H+++    RAA  +KRKW  D + A+RDC  A  ++    +AH+ +   L 
Sbjct: 399 YSQAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLF 458

Query: 478 QLGRHKEALDFAFAAQCLAPSNPEVAEKVES-----VKRDLAAAELEKSNKDNDGAIRSA 537
           +L    EAL      +CL     +  E+  S     + RD+ AA   KS    DG  + A
Sbjct: 459 ELKYVAEAL------ECLDDFKGKFPEQAHSSACDALGRDITAALFSKS----DGEEKKA 518

Query: 538 PLGGVLSLSDLLHRSDANSDVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLH 597
             GG                                                        
Sbjct: 519 AGGG-------------------------------------------------------G 578

Query: 598 GSVNLRIHRRVDPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIK 604
           G V LR   R D               S S ++ +L   E   D + RY GHCN  TDIK
Sbjct: 579 GPVRLRSTSRKD---------------SISEDEMVL--RERSYDYQFRYCGHCNTTTDIK 582

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy Swiss-Prot
Match: Q9DC22 (DDB1- and CUL4-associated factor 6 OS=Mus musculus OX=10090 GN=Dcaf6 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 5.1e-21
Identity = 72/242 (29.75%), Postives = 107/242 (44.21%), Query Frame = 0


Query: 58  LPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKF 117
           L  +L  H GCVN + WN  G  ++SGSDDT++ I +   +K+L ++ +GH ANIF  KF
Sbjct: 43  LEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANIFSAKF 102

Query: 118 VPETSDELVVSGAG-----------DAEIDLRC------GAKRSLADPPRQTLALKSCDI 177
           +P T D+ +VS +G           DAE + +C      G    +   P       SC  
Sbjct: 103 LPCTDDKQIVSCSGDGVIFYTNIEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGE 162

Query: 178 SST-------------------------------------RPHLLLVGGSDAFARLYDRR 237
             T                                      P+ L VG SD+  R+YDRR
Sbjct: 163 DGTVRWFDTRIKTSCTKEDCKDDILINCRRAATSVAICPPVPYYLAVGCSDSSVRIYDRR 222

Query: 238 ML-PPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTHVTFSPNGEEILLSYSGEHVYL 245
           ML    + +         V  F P HLS +      +T + +S +G+EIL+SYS +++YL
Sbjct: 223 MLGTRATGNYAGRGTTGMVARFIPSHLSNK---SCRVTSLCYSEDGQEILVSYSSDYIYL 281

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy Swiss-Prot
Match: Q58WW2 (DDB1- and CUL4-associated factor 6 OS=Homo sapiens OX=9606 GN=DCAF6 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 8.8e-21
Identity = 71/242 (29.34%), Postives = 108/242 (44.63%), Query Frame = 0


Query: 58  LPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKF 117
           L  +L  H GCVN + WN  G  ++SGSDDT++ I +   +K+L ++ +GH ANIF  KF
Sbjct: 43  LEATLNVHDGCVNTICWNDTGEYILSGSDDTKLVISNPYSRKVLTTIRSGHRANIFSAKF 102

Query: 118 VPETSDELVVSGAG-----------DAEIDLRC------GAKRSLADPPRQTLALKSCDI 177
           +P T+D+ +VS +G           DAE + +C      G    +   P       SC  
Sbjct: 103 LPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGE 162

Query: 178 SST-------------------------------------RPHLLLVGGSDAFARLYDRR 237
             T                                      P+ L VG SD+  R+YDRR
Sbjct: 163 DGTVRWFDTRIKTSCTKEDCKDDILINCRRAATSVAICPPIPYYLAVGCSDSSVRIYDRR 222

Query: 238 ML-PPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTHVTFSPNGEEILLSYSGEHVYL 245
           ML    + +         V  F P HL+ +      +T + +S +G+EIL+SYS +++YL
Sbjct: 223 MLGTRATGNYAGRGTTGMVARFIPSHLNNK---SCRVTSLCYSEDGQEILVSYSSDYIYL 281

[Close]

BLAST of Cp4.1LG06g04180 vs. NCBI nr
Match: XP_023535998.1 (WD and tetratricopeptide repeats protein 1-like [Cucurbita pepo subsp. pepo] >XP_023535999.1 WD and tetratricopeptide repeats protein 1-like [Cucurbita pepo subsp. pepo] >XP_023536000.1 WD and tetratricopeptide repeats protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1248 bits (3228), Expect = 0.0
Identity = 648/774 (83.72%), Postives = 648/774 (83.72%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAE---------------------------------------------- 180
           TSDELVVSGAGDAE                                              
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLKGRRHDDSPIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ---------------------------------IDLRCGAKRSLADPPRQTLALKSCDIS 240
                                            IDLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCSPEGASHQECHNVLIDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS
Sbjct: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG
Sbjct: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEKKTGRLIKILVGDGAV                               RSVVAGG
Sbjct: 661 RWFIWEKKTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVRSVVAGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. NCBI nr
Match: XP_022976302.1 (WD and tetratricopeptide repeats protein 1-like [Cucurbita maxima])

HSP 1 Score: 1235 bits (3196), Expect = 0.0
Identity = 641/774 (82.82%), Postives = 644/774 (83.20%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQDPTYS PMHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSFPMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAEI--------------------------------------------- 180
           TSDELVVSGAGDAE+                                             
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLKGRRHDDSPIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ----------------------------------DLRCGAKRSLADPPRQTLALKSCDIS 240
                                             DLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCSPEGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVR GLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRQGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPV N
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVSN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS
Sbjct: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LC+RAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCSRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVES+KRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESIKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG
Sbjct: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEKKTGRLIKILVGDGAV                               RSVVAGG
Sbjct: 661 RWFIWEKKTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVRSVVAGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. NCBI nr
Match: XP_022937077.1 (WD and tetratricopeptide repeats protein 1-like [Cucurbita moschata])

HSP 1 Score: 1235 bits (3195), Expect = 0.0
Identity = 642/774 (82.95%), Postives = 643/774 (83.07%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAE---------------------------------------------- 180
           TSDELVVSGAGDAE                                              
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLKGRRHDDSPIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ---------------------------------IDLRCGAKRSLADPPRQTLALKSCDIS 240
                                            IDLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCSPEGASHQECHNVLIDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVN AGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNRAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGLPLNGGVNAKLDKCR LLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS
Sbjct: 361 LSNGLPLNGGVNAKLDKCRNLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVES+KRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESIKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG
Sbjct: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           AN SCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANDSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEKKTGRLIKILVGDGAV                               RSVV GG
Sbjct: 661 RWFIWEKKTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPFRSVVDGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. NCBI nr
Match: KAG6591690.1 (WD and tetratricopeptide repeats protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1232 bits (3188), Expect = 0.0
Identity = 642/774 (82.95%), Postives = 642/774 (82.95%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAE---------------------------------------------- 180
           TSDELVVSGAGDAE                                              
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLKGRRHDDSPIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ---------------------------------IDLRCGAKRSLADPPRQTLALKSCDIS 240
                                            IDLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCSPEGASHQECHNVLIDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGL LNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGV LKHDS
Sbjct: 361 LSNGLLLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVSLKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LC RAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCIRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG
Sbjct: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEKKTGRLIKILVGDGAV                               RSVV GG
Sbjct: 661 RWFIWEKKTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVRSVVDGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. NCBI nr
Match: XP_038899403.1 (WD and tetratricopeptide repeats protein 1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1167 bits (3018), Expect = 0.0
Identity = 607/774 (78.42%), Postives = 625/774 (80.75%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHI+FRQDPTY L MHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHISFRQDPTYGLQMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSG+KLL SV+TGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGRKLLDSVDTGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAEI--------------------------------------------- 180
           TSDELVVSGAGDAE+                                             
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLRGRGQDDNPIASSALYRCHARRVKKLAVEIGNPNVVW 180

Query: 181 ----------------------------------DLRCGAKRSLADPPRQTLALKSCDIS 240
                                             DLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLS+RVR GLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTP+LNGLELQ  + N
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPVLNGLELQPSISN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGLPLN GVNAKLDKCRKLLQIAEKCL+ GNYFGGIEACNEILDG+GR IGVI KHD+
Sbjct: 361 LSNGLPLNCGVNAKLDKCRKLLQIAEKCLDSGNYFGGIEACNEILDGYGRSIGVIFKHDT 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LCTRAALLLKRKWKNDVHMAIRDCYSARK+D+SSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVESVKRDLAAAELEKSNK NDGAIRSAPLGGVLSLSD L+RSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKGNDGAIRSAPLGGVLSLSDFLYRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDG RSEREDSDYD+EVELDFETLSGDEA DVDSNVLHGS+NLRIHRRVDPA +RVG
Sbjct: 541 DVSQDGPRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARDRVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
            NGSCGSPSSS ND  LYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 PNGSCGSPSSSQNDTTLYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEK TGRLIKILVGDGAV                                S+VAGG
Sbjct: 661 RWFIWEKGTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTASVPSLVAGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy TrEMBL
Match: A0A6J1IFD4 (WD and tetratricopeptide repeats protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476738 PE=4 SV=1)

HSP 1 Score: 1235 bits (3196), Expect = 0.0
Identity = 641/774 (82.82%), Postives = 644/774 (83.20%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQDPTYS PMHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSFPMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAEI--------------------------------------------- 180
           TSDELVVSGAGDAE+                                             
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLKGRRHDDSPIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ----------------------------------DLRCGAKRSLADPPRQTLALKSCDIS 240
                                             DLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCSPEGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVR GLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRQGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPV N
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVSN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS
Sbjct: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LC+RAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCSRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVES+KRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESIKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG
Sbjct: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEKKTGRLIKILVGDGAV                               RSVVAGG
Sbjct: 661 RWFIWEKKTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVRSVVAGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy TrEMBL
Match: A0A6J1FA45 (WD and tetratricopeptide repeats protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111443487 PE=4 SV=1)

HSP 1 Score: 1235 bits (3195), Expect = 0.0
Identity = 642/774 (82.95%), Postives = 643/774 (83.07%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAE---------------------------------------------- 180
           TSDELVVSGAGDAE                                              
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLKGRRHDDSPIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ---------------------------------IDLRCGAKRSLADPPRQTLALKSCDIS 240
                                            IDLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCSPEGASHQECHNVLIDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH
Sbjct: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVN AGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNRAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSNGLPLNGGVNAKLDKCR LLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS
Sbjct: 361 LSNGLPLNGGVNAKLDKCRNLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA
Sbjct: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQCLAPSNPEVAEKVES+KRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS
Sbjct: 481 AQCLAPSNPEVAEKVESIKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG
Sbjct: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           AN SCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANDSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEKKTGRLIKILVGDGAV                               RSVV GG
Sbjct: 661 RWFIWEKKTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPFRSVVDGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy TrEMBL
Match: A0A6J1BW21 (WD and tetratricopeptide repeats protein 1 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111006244 PE=4 SV=1)

HSP 1 Score: 1164 bits (3010), Expect = 0.0
Identity = 599/739 (81.06%), Postives = 622/739 (84.17%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           ME+FAFHDGNVCGLL+SRHINFRQD T +L MHSSFIQRLSQEKELE             
Sbjct: 1   MEEFAFHDGNVCGLLDSRHINFRQDSTCNLQMHSSFIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNS GSLLISGSDDTRINIWSYSG+KLLHSV+TGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSSGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAEI-------------------------------------------DL 180
           TSDELVVSGAGD+E+                                           DL
Sbjct: 121 TSDELVVSGAGDSEVEIGNPNVVWSASEDGTLRQHDFREGMSCPPDGSPHQECHNVLLDL 180

Query: 181 RCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSP 240
           RCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSP
Sbjct: 181 RCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSP 240

Query: 241 PPCVNYFCPMHLSERVRPGLHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTS 300
           PPCVNYFCPMHLS+RVR  LHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAG  TMQYTS
Sbjct: 241 PPCVNYFCPMHLSDRVRSSLHLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGQNTMQYTS 300

Query: 301 GDVSKLMSFTPILNGLELQHPVPNLSNGLPLNGGVNA-KLDKCRKLLQIAEKCLEGGNYF 360
           GDVSKLMSFTPILNGLELQ+P+ N SNGLP+N GVN+ KLDKCRKLLQIAEKCLEGGNYF
Sbjct: 301 GDVSKLMSFTPILNGLELQYPISNFSNGLPVNCGVNSSKLDKCRKLLQIAEKCLEGGNYF 360

Query: 361 GGIEACNEILDGFGRIIGVILKHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSF 420
           GGIEACNEILDG GR IGVI KHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKID+SS 
Sbjct: 361 GGIEACNEILDGHGRNIGVIFKHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKIDHSSV 420

Query: 421 RAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDND 480
           RAHYYM EALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNK ND
Sbjct: 421 RAHYYMSEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNKGND 480

Query: 481 GAIRSAPLGGVLSLSDLLHRSDANSDVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDV 540
           GA+RSAPLGGVLSLSD L+RSDANSDVSQDG+RSEREDSDYD+EVELDFETLSGDEA DV
Sbjct: 481 GALRSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDV 540

Query: 541 DSNVLHGSVNLRIHRRVDPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCN 600
           DSN+LHGS+NLRIHRRVDPA ERVGANGSCGSPSSS NDGILYQPEPVIDMKQRYVGHCN
Sbjct: 541 DSNILHGSLNLRIHRRVDPARERVGANGSCGSPSSSQNDGILYQPEPVIDMKQRYVGHCN 600

Query: 601 IGTDIKQASFLGQRGEYVASGSDDGRWFIWEKKTGRLIKILVGDGAV------------- 660
           IGTDIKQASFLGQRGEYVASGSDDGRWFIWEK TGRLIKIL GDGAV             
Sbjct: 601 IGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLIKILFGDGAVVNCVQCHPYDCAI 660

Query: 661 ------------------RSVVAGGGIGPQAADVLAAIENNQRRLCRNREAILPFEILER 664
                              S+VAGG +GPQA+DVL A+ENNQRRLCRNREAILPFEILER
Sbjct: 661 ATSGIDNTIKLWTPTAPVPSIVAGGAVGPQASDVLTAMENNQRRLCRNREAILPFEILER 720

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy TrEMBL
Match: A0A6J1FJT8 (WD and tetratricopeptide repeats protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446086 PE=4 SV=1)

HSP 1 Score: 1151 bits (2978), Expect = 0.0
Identity = 600/774 (77.52%), Postives = 620/774 (80.10%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQ+P YSL MHSS IQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQNPNYSLQMHSSLIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNS GSLLISGSDDTRINIW+YSGQKLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSSGSLLISGSDDTRINIWNYSGQKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAEI--------------------------------------------- 180
           TSDELVVSGAGDAE+                                             
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLRGRGHDDNAIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ----------------------------------DLRCGAKRSLADPPRQTLALKSCDIS 240
                                             DLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           +TRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRM+PPPCVNYFCPMHLS+RVR GLHLTH
Sbjct: 241 TTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMTPPPCVNYFCPMHLSDRVRSGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAG  TMQYTSGDVSKLMSFTPILNGLELQ+P+ N
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGQSTMQYTSGDVSKLMSFTPILNGLELQYPISN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSN LP++ G+NAKLDKCRKLLQIAEKC E GNYFGGIEACNEILDG+GR IGVI KHDS
Sbjct: 361 LSNSLPVSCGLNAKLDKCRKLLQIAEKCTEVGNYFGGIEACNEILDGYGRNIGVIFKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LCTRA LLLKRKWKNDVHMAIRDCYSARKID SSFRAHYYM EALSQLGRHKEALDFAFA
Sbjct: 421 LCTRAGLLLKRKWKNDVHMAIRDCYSARKIDQSSFRAHYYMSEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQ LAPSNPEVAEKVESVKRDLAAAE EKSNK NDGA+RSAPLGGVLSLSD L+RSDANS
Sbjct: 481 AQYLAPSNPEVAEKVESVKRDLAAAESEKSNKSNDGALRSAPLGGVLSLSDFLYRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDG+RSEREDSDYD+EVELDFETLSGDEA DVDSNVL GS+NLRIHRR+DPA ERVG
Sbjct: 541 DVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLQGSLNLRIHRRIDPARERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           ANG+CGSPSSS NDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANGTCGSPSSSQNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEK TGRLIKILVGDGAV                                SVVAGG
Sbjct: 661 RWFIWEKGTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPIPSVVAGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. ExPASy TrEMBL
Match: A0A6J1J4N6 (WD and tetratricopeptide repeats protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481283 PE=4 SV=1)

HSP 1 Score: 1151 bits (2977), Expect = 0.0
Identity = 600/774 (77.52%), Postives = 620/774 (80.10%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYSLPMHSSFIQRLSQEKELEFRKLNSAPPHLPN 60
           MEDFAFHDGNVCGLLESRHINFRQ+P YSL MHSS IQRLSQEKELE             
Sbjct: 1   MEDFAFHDGNVCGLLESRHINFRQNPNYSLQMHSSLIQRLSQEKELE------------- 60

Query: 61  SLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTKFVPE 120
              GHQGCVNAVAWNS GSLLISGSDDTRINIW+YSG+KLLHSVETGHSANIFCTKFVPE
Sbjct: 61  ---GHQGCVNAVAWNSSGSLLISGSDDTRINIWNYSGRKLLHSVETGHSANIFCTKFVPE 120

Query: 121 TSDELVVSGAGDAEI--------------------------------------------- 180
           TSDELVVSGAGDAE+                                             
Sbjct: 121 TSDELVVSGAGDAEVRLFNLSRLRGRGHDDNAIASSALYQCHTRRVKKLAVEIGNPNVVW 180

Query: 181 ----------------------------------DLRCGAKRSLADPPRQTLALKSCDIS 240
                                             DLRCGAKRSLADPPRQTLALKSCDIS
Sbjct: 181 SASEDGTLRQHDFRESMSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDIS 240

Query: 241 STRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTH 300
           +TRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLS+RVR GLHLTH
Sbjct: 241 TTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTH 300

Query: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQHPVPN 360
           VTFSPNGEEILLSYSGEHVYLMNVNHAG  TMQYTSGDVSKLMSFTPILNGLELQ+P+ N
Sbjct: 301 VTFSPNGEEILLSYSGEHVYLMNVNHAGQSTMQYTSGDVSKLMSFTPILNGLELQYPISN 360

Query: 361 LSNGLPLNGGVNAKLDKCRKLLQIAEKCLEGGNYFGGIEACNEILDGFGRIIGVILKHDS 420
           LSN LP++ G+NAKLDKCRKLLQIAEKC E GNYFGGIEACNEILDG+GR IGVI KHDS
Sbjct: 361 LSNSLPVSCGLNAKLDKCRKLLQIAEKCTEVGNYFGGIEACNEILDGYGRNIGVIFKHDS 420

Query: 421 LCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEALDFAFA 480
           LCTRA LLLKRKWKNDVHMAIRDCYSARKID SSFRAHYYM EALSQLGRHKEALDFAFA
Sbjct: 421 LCTRAGLLLKRKWKNDVHMAIRDCYSARKIDQSSFRAHYYMSEALSQLGRHKEALDFAFA 480

Query: 481 AQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLHRSDANS 540
           AQ LAPSNPEVAEKVESVKRDLAAAE EKSNK NDGA+RSAPLGGVLSLSD L+RSDANS
Sbjct: 481 AQYLAPSNPEVAEKVESVKRDLAAAESEKSNKSNDGALRSAPLGGVLSLSDFLYRSDANS 540

Query: 541 DVSQDGVRSEREDSDYDDEVELDFETLSGDEAQDVDSNVLHGSVNLRIHRRVDPAIERVG 600
           DVSQDG+RSEREDSDYD+EVELDFETLSGDEA DVDSNVL GS+NLRIHRR+DPA ERVG
Sbjct: 541 DVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLQGSLNLRIHRRIDPARERVG 600

Query: 601 ANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660
           ANG+CGSPSSS NDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG
Sbjct: 601 ANGTCGSPSSSQNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDG 660

Query: 661 RWFIWEKKTGRLIKILVGDGAV-------------------------------RSVVAGG 664
           RWFIWEK TGRLIKILVGDGAV                                SVVAGG
Sbjct: 661 RWFIWEKGTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTAPVPSVVAGG 720

[Close]

BLAST of Cp4.1LG06g04180 vs. TAIR 10
Match: AT5G10940.2 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 780.0 bits (2013), Expect = 1.5e-225
Identity = 431/782 (55.12%), Postives = 514/782 (65.73%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYS----LPMHSSFIQRLSQEKELEFRKLNSAPP 60
           M++ +FHDGN+  LL +R     QDP++     +  HSS ++RLSQE+ELE         
Sbjct: 1   MDNLSFHDGNIFNLLHTR----SQDPSHEVDQRMQFHSSLVRRLSQEQELE--------- 60

Query: 61  HLPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTK 120
                  GHQGCVNA+AWNS GSLLISGSDD RINIW+YS +KLLHS++TGH+ANIFCTK
Sbjct: 61  -------GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTK 120

Query: 121 FVPETSDELVVSGAGDAEI----------------------------------------- 180
           FVPETSDELVVSGAGDAE+                                         
Sbjct: 121 FVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNP 180

Query: 181 --------------------------------------DLRCGAKRSLADPPRQTLALKS 240
                                                 DLR GAKR+LADPP+QTL+LKS
Sbjct: 181 NVVWSASEDGTLRQHDFRESTSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKS 240

Query: 241 CDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGL 300
           CDIS+TRPHLLLVGGSDAFARLYDRRMLPPL+SS+KRM PPPCVNYFCPMHLSER R  L
Sbjct: 241 CDISATRPHLLLVGGSDAFARLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNL 300

Query: 301 HLTHVTFSPNGEEILLSYSGEHVYLMNVNHAGLGTMQYTSGDVSKLMSFTPILNGLELQH 360
           HLTHVTFSPNGEE+LLSYSGEHVYLMNVN+ G G MQYT GDV  L SF+  L+ +E   
Sbjct: 301 HLTHVTFSPNGEEVLLSYSGEHVYLMNVNN-GTGIMQYTPGDVDNLFSFSNNLHDVESPP 360

Query: 361 PVPNL-SNGLPLNGGVNAKLDKCRKLLQIAEKCL-EGGNYFGGIEACNEILDGFGRIIGV 420
            V     NG   +    A + KC +L++IA+  L EG + F  IEA NE+LD     I  
Sbjct: 361 QVSTTPQNGFHRSSNA-ATVKKCTELVEIAKWSLEEGTDVFYAIEAANEVLDAHSNDIES 420

Query: 421 ILKHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHKEA 480
            L+H+ LCTRAALLLKRKWKND HMA+RDC++AR+ID SSF+AHYYM EAL QLG+ KEA
Sbjct: 421 ALRHECLCTRAALLLKRKWKNDAHMAVRDCHNARRIDASSFKAHYYMSEALQQLGKCKEA 480

Query: 481 LDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDLLH 540
           LDFA AAQ + PS+ ++  KVES+KRDL AA  EK+ +   G  R      VLSLSD+L+
Sbjct: 481 LDFATAAQHMNPSDADIVAKVESIKRDLQAAGAEKNEETGAGTTR------VLSLSDILY 540

Query: 541 RSDANSDVSQDGVRSEREDSDYDDEVELDFET-LSGDEAQDVDSNVLHGSVNLRIHR-RV 600
           RS+ANSD S D  RSEREDSDYD+E+ELD +T LS DE +D DSN + GS+NLRIHR   
Sbjct: 541 RSEANSDSSHDMSRSEREDSDYDEELELDIQTSLSDDEGRDTDSNSMRGSLNLRIHRVGD 600

Query: 601 DPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEY 660
           D  +E    N S G+ SSS ND   YQPE  IDMK+RYVGHCN+GTDIKQASFLGQRGEY
Sbjct: 601 DKPMENTVDNASSGTASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEY 660

Query: 661 VASGSDDGRWFIWEKKTGRLIKILVGD-------------------------------GA 665
           +ASGSDDGRWFIWEK+TGRL+K+LVGD                                +
Sbjct: 661 IASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPTAS 720

[Close]

BLAST of Cp4.1LG06g04180 vs. TAIR 10
Match: AT5G10940.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 777.3 bits (2006), Expect = 9.7e-225
Identity = 430/784 (54.85%), Postives = 513/784 (65.43%), Query Frame = 0


Query: 1   MEDFAFHDGNVCGLLESRHINFRQDPTYS----LPMHSSFIQRLSQEKELEFRKLNSAPP 60
           M++ +FHDGN+  LL +R     QDP++     +  HSS ++RLSQE+ELE         
Sbjct: 1   MDNLSFHDGNIFNLLHTR----SQDPSHEVDQRMQFHSSLVRRLSQEQELE--------- 60

Query: 61  HLPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSYSGQKLLHSVETGHSANIFCTK 120
                  GHQGCVNA+AWNS GSLLISGSDD RINIW+YS +KLLHS++TGH+ANIFCTK
Sbjct: 61  -------GHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTK 120

Query: 121 FVPETSDELVVSGAGDAEI----------------------------------------- 180
           FVPETSDELVVSGAGDAE+                                         
Sbjct: 121 FVPETSDELVVSGAGDAEVRLFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNP 180

Query: 181 --------------------------------------DLRCGAKRSLADPPRQTLALKS 240
                                                 DLR GAKR+LADPP+QTL+LKS
Sbjct: 181 NVVWSASEDGTLRQHDFRESTSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKS 240

Query: 241 CDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGL 300
           CDIS+TRPHLLLVGGSDAFARLYDRRMLPPL+SS+KRM PPPCVNYFCPMHLSER R  L
Sbjct: 241 CDISATRPHLLLVGGSDAFARLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNL 300

Query: 301 HLTHVTFSPNGEEILLSYSGEHVYLMNVNH--AGLGTMQYTSGDVSKLMSFTPILNGLEL 360
           HLTHVTFSPNGEE+LLSYSGEHVYLMNVN+     G MQYT GDV  L SF+  L+ +E 
Sbjct: 301 HLTHVTFSPNGEEVLLSYSGEHVYLMNVNNGICSTGIMQYTPGDVDNLFSFSNNLHDVES 360

Query: 361 QHPVPNL-SNGLPLNGGVNAKLDKCRKLLQIAEKCL-EGGNYFGGIEACNEILDGFGRII 420
              V     NG   +    A + KC +L++IA+  L EG + F  IEA NE+LD     I
Sbjct: 361 PPQVSTTPQNGFHRSSNA-ATVKKCTELVEIAKWSLEEGTDVFYAIEAANEVLDAHSNDI 420

Query: 421 GVILKHDSLCTRAALLLKRKWKNDVHMAIRDCYSARKIDNSSFRAHYYMCEALSQLGRHK 480
              L+H+ LCTRAALLLKRKWKND HMA+RDC++AR+ID SSF+AHYYM EAL QLG+ K
Sbjct: 421 ESALRHECLCTRAALLLKRKWKNDAHMAVRDCHNARRIDASSFKAHYYMSEALQQLGKCK 480

Query: 481 EALDFAFAAQCLAPSNPEVAEKVESVKRDLAAAELEKSNKDNDGAIRSAPLGGVLSLSDL 540
           EALDFA AAQ + PS+ ++  KVES+KRDL AA  EK+ +   G  R      VLSLSD+
Sbjct: 481 EALDFATAAQHMNPSDADIVAKVESIKRDLQAAGAEKNEETGAGTTR------VLSLSDI 540

Query: 541 LHRSDANSDVSQDGVRSEREDSDYDDEVELDFET-LSGDEAQDVDSNVLHGSVNLRIHR- 600
           L+RS+ANSD S D  RSEREDSDYD+E+ELD +T LS DE +D DSN + GS+NLRIHR 
Sbjct: 541 LYRSEANSDSSHDMSRSEREDSDYDEELELDIQTSLSDDEGRDTDSNSMRGSLNLRIHRV 600

Query: 601 RVDPAIERVGANGSCGSPSSSHNDGILYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRG 660
             D  +E    N S G+ SSS ND   YQPE  IDMK+RYVGHCN+GTDIKQASFLGQRG
Sbjct: 601 GDDKPMENTVDNASSGTASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRG 660

Query: 661 EYVASGSDDGRWFIWEKKTGRLIKILVGD------------------------------- 665
           EY+ASGSDDGRWFIWEK+TGRL+K+LVGD                               
Sbjct: 661 EYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPT 720

[Close]

BLAST of Cp4.1LG06g04180 vs. TAIR 10
Match: AT3G45620.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 3.3e-23
Identity = 89/289 (30.80%), Postives = 124/289 (42.91%), Query Frame = 0


Query: 33  HSSFIQRLSQEKELEFRKLNSAPPHLPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINI 92
           H   I R     E   +KL+     L   L GH+GCVNAV +NS G +L+SGSDD +I +
Sbjct: 27  HPITISRRISASEGRVKKLD-----LYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIML 86

Query: 93  WSY-SGQKLLHSVETGHSANIFCTKFVPETSDELVVSGAGDAEIDL-------------- 152
           W++ SG + L S  +GH  N+F TKF+P T D  +++   D ++ L              
Sbjct: 87  WNWLSGSRKL-SYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQILENGKVETKRL 146

Query: 153 ---------------------RCG--------------AKRSLADPP----------RQT 212
                                 CG              A   L   P             
Sbjct: 147 GRHHGRVYKLAVLPGDPNVFYSCGEDGFVQHFDIRSNSATMVLYSSPFTQGCRRHHSSSR 206

Query: 213 LALKSCDISSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSER 262
           + L S  I     + L VGGSD +AR+YD R +  L+   + + P   VN FCP HL E 
Sbjct: 207 IRLNSIAIDPRNSYYLAVGGSDEYARVYDTRRV-QLAPVCRHVLPDAPVNTFCPRHLRE- 266

HSP 2 Score: 62.8 bits (151), Expect = 1.2e-09
Identity = 40/112 (35.71%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 510 HRRVDPAIERVG-ANGSCGSPSSSHNDGILY---------------QPEPVIDMK--QRY 569
           H R   ++   G A    G    S+ND ++Y                PE + +M+  Q Y
Sbjct: 255 HLRETNSVHITGLAYSKAGELLVSYNDELIYLFEKNMGYGSSPVSVSPEKLQEMEEPQVY 314

Query: 570 VGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKKTGRLIKILVGDGAV 604
           +GH N  T +K  +F G   EYV SGSD G  FIW+KK G+L++ +VGD  V
Sbjct: 315 IGHRNAQT-VKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRV 365

[Close]

BLAST of Cp4.1LG06g04180 vs. TAIR 10
Match: AT3G45620.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 5.6e-23
Identity = 83/264 (31.44%), Postives = 116/264 (43.94%), Query Frame = 0


Query: 58  LPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWSY-SGQKLLHSVETGHSANIFCTK 117
           L   L GH+GCVNAV +NS G +L+SGSDD +I +W++ SG + L S  +GH  N+F TK
Sbjct: 81  LYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKL-SYPSGHCENVFQTK 140

Query: 118 FVPETSDELVVSGAGDAEIDL-----------------------------------RCG- 177
           F+P T D  +++   D ++ L                                    CG 
Sbjct: 141 FIPFTDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGE 200

Query: 178 -------------AKRSLADPP----------RQTLALKSCDISSTRPHLLLVGGSDAFA 237
                        A   L   P             + L S  I     + L VGGSD +A
Sbjct: 201 DGFVQHFDIRSNSATMVLYSSPFTQGCRRHHSSSRIRLNSIAIDPRNSYYLAVGGSDEYA 260

Query: 238 RLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTHVTFSPNGEEILLSYSG 262
           R+YD R +  L+   + + P   VN FCP HL E     +H+T + +S  G E+L+SY+ 
Sbjct: 261 RVYDTRRV-QLAPVCRHVLPDAPVNTFCPRHLRE--TNSVHITGLAYSKAG-ELLVSYND 320

HSP 2 Score: 62.8 bits (151), Expect = 1.2e-09
Identity = 40/112 (35.71%), Postives = 56/112 (50.00%), Query Frame = 0


Query: 510 HRRVDPAIERVG-ANGSCGSPSSSHNDGILY---------------QPEPVIDMK--QRY 569
           H R   ++   G A    G    S+ND ++Y                PE + +M+  Q Y
Sbjct: 289 HLRETNSVHITGLAYSKAGELLVSYNDELIYLFEKNMGYGSSPVSVSPEKLQEMEEPQVY 348

Query: 570 VGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKKTGRLIKILVGDGAV 604
           +GH N  T +K  +F G   EYV SGSD G  FIW+KK G+L++ +VGD  V
Sbjct: 349 IGHRNAQT-VKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRV 399

[Close]

BLAST of Cp4.1LG06g04180 vs. TAIR 10
Match: AT4G38480.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-18
Identity = 77/275 (28.00%), Postives = 114/275 (41.45%), Query Frame = 0


Query: 35  SFIQRLSQEKELEFRKLNSAPPHLPNSLQGHQGCVNAVAWNSRGSLLISGSDDTRINIWS 94
           SF  R S  ++L  R+L      L   L  H+GCVN V++N+ G +L+SGSDD ++ +W 
Sbjct: 30  SFSNRFSASEDL-LRRLG-----LDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWD 89

Query: 95  YSGQKLLHSVETGHSANIFCTKFVPETSDELVVSGAGDAEI----------------DLR 154
           +    +  S ++GH  NIF  KF+P + D  +V+ A D ++                   
Sbjct: 90  WQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQVRYSKILESGQVETSLLGKH 149

Query: 155 CGAKRSLADPPRQTLALKSCD------------------------------------ISS 214
            G    LA  P    +  +C                                     +  
Sbjct: 150 QGPVHKLAVEPGSPFSFYTCGEDGAVKHFDLRTRVATNLFTCKEAKFNLVVYLHAIAVDP 209

Query: 215 TRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSERVRPGLHLTHV 258
             P LL V G D +AR+YD R     S      + P  +++FCP HL      G  +T +
Sbjct: 210 RNPGLLAVAGMDEYARVYDIRSY--RSEGWYNFTQP--IDHFCPGHLIGDDHVG--ITGL 269

HSP 2 Score: 50.1 bits (118), Expect = 8.2e-06
Identity = 25/52 (48.08%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 549 QRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKKTGRLIKILVGD 601
           Q Y  H N  T +K  +F G + EYV SGSD GR FIW KK G L++ +  D
Sbjct: 301 QVYKEHTNRET-VKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEAD 351

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g04180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94BQ3	1.4e-223	54.85	Protein ALTERED SEED GERMINATION 2 OS=Arabidopsis thaliana OX=3702 GN=ASG2 PE=1 ...	[more]
Q8N5D0	3.5e-46	27.92	WD and tetratricopeptide repeats protein 1 OS=Homo sapiens OX=9606 GN=WDTC1 PE=1...	[more]
Q80ZK9	2.3e-45	27.30	WD and tetratricopeptide repeats protein 1 OS=Mus musculus OX=10090 GN=Wdtc1 PE=...	[more]
Q9DC22	5.1e-21	29.75	DDB1- and CUL4-associated factor 6 OS=Mus musculus OX=10090 GN=Dcaf6 PE=1 SV=1	[more]
Q58WW2	8.8e-21	29.34	DDB1- and CUL4-associated factor 6 OS=Homo sapiens OX=9606 GN=DCAF6 PE=1 SV=1	[more]

BLAST of Cp4.1LG06g04180 vs. NCBI nr


Match Name	Identity	Description
XP_023535998.1	83.72	WD and tetratricopeptide repeats protein 1-like [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022976302.1	82.82	WD and tetratricopeptide repeats protein 1-like [Cucurbita maxima]	[more]
XP_022937077.1	82.95	WD and tetratricopeptide repeats protein 1-like [Cucurbita moschata]	[more]
KAG6591690.1	82.95	WD and tetratricopeptide repeats protein 1, partial [Cucurbita argyrosperma subs...	[more]
XP_038899403.1	78.42	WD and tetratricopeptide repeats protein 1 isoform X1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG06g04180 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1IFD4	82.82	WD and tetratricopeptide repeats protein 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FA45	82.95	WD and tetratricopeptide repeats protein 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1BW21	81.06	WD and tetratricopeptide repeats protein 1 isoform X3 OS=Momordica charantia OX=...	[more]
A0A6J1FJT8	77.52	WD and tetratricopeptide repeats protein 1-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1J4N6	77.52	WD and tetratricopeptide repeats protein 1-like isoform X1 OS=Cucurbita maxima O...	[more]

BLAST of Cp4.1LG06g04180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10940.2	1.5e-225	55.12	transducin family protein / WD-40 repeat family protein	[more]
AT5G10940.1	9.7e-225	54.85	transducin family protein / WD-40 repeat family protein	[more]
AT3G45620.1	3.3e-23	30.80	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G45620.2	5.6e-23	31.44	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G38480.1	1.9e-18	28.00	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 416..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 459..480
None	No IPR available	PANTHER	PTHR15574:SF40	WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1	coord: 26..137
None	No IPR available	PANTHER	PTHR15574:SF40	WD AND TETRATRICOPEPTIDE REPEATS PROTEIN 1	coord: 135..603
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 62..94 score: 11.919224
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 141..181 e-value: 11.0 score: 10.5 coord: 55..94 e-value: 3.6E-8 score: 43.2 coord: 97..139 e-value: 17.0 score: 9.2 coord: 544..587 e-value: 1.3 score: 16.3
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 61..94 e-value: 6.8E-6 score: 26.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 62..103 score: 15.320672
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 39..268 e-value: 1.2E-24 score: 88.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 291..440 e-value: 1.1E-11 score: 46.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 299..414
IPR045151	DDB1- and CUL4-associated factor 8-like	PANTHER	PTHR15574	WD REPEAT DOMAIN-CONTAINING FAMILY	coord: 26..137
IPR045151	DDB1- and CUL4-associated factor 8-like	PANTHER	PTHR15574	WD REPEAT DOMAIN-CONTAINING FAMILY	coord: 135..603
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 58..606

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g04180.1	Cp4.1LG06g04180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway
biological_process	GO:0045717	negative regulation of fatty acid biosynthetic process
biological_process	GO:1901000	regulation of response to salt stress
cellular_component	GO:0080008	Cul4-RING E3 ubiquitin ligase complex
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding