Cp4.1LG06g03300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g03300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG06: 1860373 .. 1863580 (+)
RNA-Seq Expression	Cp4.1LG06g03300
Synteny	Cp4.1LG06g03300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGTTTTAAATGTTTAACTTTTGGTTCTGATTAGTTTTTTTAATGCAATCTGCTGTTAGTCGTCGTCACTTTCATGATCTGATTTCAAAAAGTTGATGATAGCTTAAGCATATCACGCGCACCCCTTGTTGAGATTACTTTGGAAACTACTTAATTAGTCTCTTCTGTTAATGGAATATCTGAGTATCAATATATCAAAGATCATATTACAGAAGATACTGAAAATCGAATTACCTTGTGAGTTCTCATGTCGGTTGGAGAGAGAGAGGAACGAAACATTCCTTGTAAGGATGTGTAAACCTCTCCTTAACATACGTGTTTTAAAACCGTGAAGCTAATAGCACTACGTAACGGGCTAAAACGGCCAATATTTGCTAGCGGTGTGTTTGGGCTGTTATAAATGGTATTAAAGCCAGACACCGGGCGGTGTACTAGCGAGGACGCTAGGCCCCAAGGGGAGTGAATTGTGAGATCCCATACCGGTTGGAGAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAACAAATGCGTTTTAAAACCATAAAGCTGATAGCGATACGTAATGGGCTAAAACGGACAATATCTACTAGCGGTGTGCTTGGGCCATTACATCACTTAATGTTTTGATTTAGAATTTAATGGTTTTTTGAAGTGTAAAGCATGGGAAATTGATCATCAAGAACTTTGCTGAATCAAGTTAGGTGCTTGGCCTACTTAATTTATGATATGTTTCTACAGAAATGACTACTAGACCAAACTTGCATCCATTTAGTATTATTTTCTGCGAAGGTGTCCATATCACTGCCCTTCTTTCAGCAGACCCAACATCCATTGTTGTCTCTCTTTTTCTCTCTACCTAGTTGTCGTCTCCTTCACTCTCTTAACCAAGCTGATATACGTATAAATAGTCCAAAGTTGCTAACAAAACTACCCATTCGGTCCACTGCTAATGCTAGCTAGCTACCCTCATCCCATTGCCTTTGAATTATTTGAAAACAGGAAAGATCCTAATGGAGCTTCAACTTGAGCTAGCGCTTTGTGTATCAGATCCCACCAGAGGTTTCGACCTGAACAGGGCTGCGTGTGATGGAAAAGATGTGTTTGGTTCAGATCCAAGGAGCTGTCTGCGTGCAGAAAGTACAAGCCATGGTAGACACAAGCGTGGATATGAAGATGCTTTCTTTAAGAGCAAAGACTCGTTTAAAGAGCTGTCTTTGCTGCTGTGGAGCGGTCACCCAAACAAGGAAGACGATGACTGGAAGGACACCAACCAGAGAAGCTCTTGTGCTCTACACATGTGAGTTCCATTTGCTCAACTGATTTTTCCTTTTTTAGAATACTTTAATCTATGCTCGTTAGATAAATATGCTGGTTTTTATCCTAACGGTCGATGGTTCAATCCTCCACTCCATAATTCAAAAGAAGTATTATTATGTAGGGAGAGAATTTGAACATCGACCCATGAGAGTAGACACTGGTATTTAACTACTTGAGTTATGTTCATGAACTGATATACATCAAACAAGGAGATAATATATATTTCTCTGTTTTTAAGTTAGATTTCAGTTCTTATTTTCAGTTATGGGTCTGAATTTCATTTTCAAACTTAAAATTGATGCTTTGTTCCATTTTCATAGCAGAAATGCTGAAGAGGAGAACAAAGTTATGGGTTGGCCGCCCATTAAATCATGGAGGAAAAAGTACCTTCATGAACTGCAACAGGATGGCTTTGGTTCTGATCAGATACCAAATCACTATTGGATGGAAGAGGATGAAGATGATGAAATTGTTTTTAACCCAAAATATGTGAAGGTGAAGATGGAAGGGGTGCCAATAGCAAGGAAGATTGATGTGGGGCTGTATAGCTCTTATCAGACGCTGAAAACTGCCTTGATCCACATGTTTTCCGATTCTTGCTGTGAGTGAACAGTATAACTATTTATTTGCTCTTCCAAATTTACTTCCAAATTGGTTTAGATATATATAATTGACTGAGAATTAAGGATTTGAAACTCCCGACCTCACATGTTTTGAACTCAAAATGATCCAATTTTTGTTGCTGAGTGGTAATTAGATTCAAAGCTGACGTTTTCTTATGAACAGATCAAAAGTGTGGGAGCAGTAATGCCAACTTAACTCTCACCTATCAGAACAAAGAAGGAGATTGGCTGCTTGCAGGAGATCTTCCATGGCAGTAAGCACTGTTTCTTTCTTAATTTATTCTCTCTCTTTCTCTCTTTCTCTCTCGATGAAAACATTGATAGTAGTACTTATCTGTAATAGCGCCGAGCGCTGACAAATATTGTTCTTTTTGGGTTTTTTCTTTCGGACTTTTCCTCAAGGTTTTTAAAATGTGTATGCTTGGGAGAGGTTTCCACACCCTTATAAAAAATACTTCGTTCTCCTCCCCCATCGATGTGGGATCTCACGATCCACCCCCTTCGGGACCTAGTGCCCTTGTTAGCACTCGTTACCTTTTCCAATAGATGTGGGATCCCCCCATCTACCCCTTATGGGGCTCAGCCTTCTCGTTGGCACATCGCCCGATGTCATTTGTAATAGCTCAAGCCCACCGCTAGTAGATATTATCTTCTTTGAGATTTTCCTCAAGGTTTTCAAAACGCGTATGCTAGGGGAGAGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCTTCAACCTACTTCACATTTTATGTTTTTGACAAAGATTCTCTTCTTTTTCCACTGTCTCTCTCCATATGCATTATTAGAACTTTGATTCTGTGAAACGATGATTAGATTCTGAATACAAGAAATAATGCTTTACAGGACGTTTCTTGAGTCAGTACAGTGCATGAAGATCATAAGAAGACAACCATCAAACTAATGGAAGAAATCCTCATGTGATTGCTGCTTGTAAGTTTATTATGTTGCTTGTATGATAGTATTTTGAGACCCATCTGCAAAAGTTAATCAAATGGGTGAGATTTTGGATGTCACTCCAAGATTATCATTTGATTGGCCAATTTCAATGGTTAACATTATGCCATCTATATGTATCCTGTTCCGCTCAATAAATAATTAATGAAATCGAGATCGAGATGTTGGTGCCTAATAGGTCATGTGACTCCGGAAATGTGGGATTTTCATCGATAAGATATGACACTTTTTTTTAATGGCAGGATAGGATCAAATCATTATCTTTGA

mRNA sequence

ATGGAAGGAAAGATCCTAATGGAGCTTCAACTTGAGCTAGCGCTTTGTGTATCAGATCCCACCAGAGGTTTCGACCTGAACAGGGCTGCGTGTGATGGAAAAGATGTGTTTGGTTCAGATCCAAGGAGCTGTCTGCGTGCAGAAAGTACAAGCCATGGTAGACACAAGCGTGGATATGAAGATGCTTTCTTTAAGAGCAAAGACTCGTTTAAAGAGCTGTCTTTGCTGCTGTGGAGCGGTCACCCAAACAAGGAAGACGATGACTGGAAGGACACCAACCAGAGAAGCTCTTGTGCTCTACACATAAATGCTGAAGAGGAGAACAAAGTTATGGGTTGGCCGCCCATTAAATCATGGAGGAAAAAGTACCTTCATGAACTGCAACAGGATGGCTTTGGTTCTGATCAGATACCAAATCACTATTGGATGGAAGAGGATGAAGATGATGAAATTGTTTTTAACCCAAAATATGTGAAGGTGAAGATGGAAGGGGTGCCAATAGCAAGGAAGATTGATGTGGGGCTGTATAGCTCTTATCAGACGCTGAAAACTGCCTTGATCCACATGTTTTCCGATTCTTGCTATCAAAAGTGTGGGAGCAGTAATGCCAACTTAACTCTCACCTATCAGAACAAAGAAGGAGATTGGCTGCTTGCAGGAGATCTTCCATGGCAGATAGGATCAAATCATTATCTTTGA

Coding sequence (CDS)

ATGGAAGGAAAGATCCTAATGGAGCTTCAACTTGAGCTAGCGCTTTGTGTATCAGATCCCACCAGAGGTTTCGACCTGAACAGGGCTGCGTGTGATGGAAAAGATGTGTTTGGTTCAGATCCAAGGAGCTGTCTGCGTGCAGAAAGTACAAGCCATGGTAGACACAAGCGTGGATATGAAGATGCTTTCTTTAAGAGCAAAGACTCGTTTAAAGAGCTGTCTTTGCTGCTGTGGAGCGGTCACCCAAACAAGGAAGACGATGACTGGAAGGACACCAACCAGAGAAGCTCTTGTGCTCTACACATAAATGCTGAAGAGGAGAACAAAGTTATGGGTTGGCCGCCCATTAAATCATGGAGGAAAAAGTACCTTCATGAACTGCAACAGGATGGCTTTGGTTCTGATCAGATACCAAATCACTATTGGATGGAAGAGGATGAAGATGATGAAATTGTTTTTAACCCAAAATATGTGAAGGTGAAGATGGAAGGGGTGCCAATAGCAAGGAAGATTGATGTGGGGCTGTATAGCTCTTATCAGACGCTGAAAACTGCCTTGATCCACATGTTTTCCGATTCTTGCTATCAAAAGTGTGGGAGCAGTAATGCCAACTTAACTCTCACCTATCAGAACAAAGAAGGAGATTGGCTGCTTGCAGGAGATCTTCCATGGCAGATAGGATCAAATCATTATCTTTGA

Protein sequence

MEGKILMELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQIGSNHYL

Homology

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BLAST of Cp4.1LG06g03300 vs. ExPASy Swiss-Prot
Match: Q93WC4 (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 3.1e-21
Identity = 79/247 (31.98%), Postives = 118/247 (47.77%), Query Frame = 0


Query: 7   MELQLELALCVSDPTR---GFDLNR-AACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDA 66
           MEL L L+L     ++    FDLN+  A +G         SCL       G  K  +E  
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEG-------AASCL-------GTEKLRFEAT 60

Query: 67  F----FKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKS 126
           F     +      +  L   +G PN+ED+   D  +  S  ++ + EE ++V+GWPP+K+
Sbjct: 61  FGLGNVEENCYMPKQRLFALNGQPNEEDE---DPLESESSIVYDDEEENSEVVGWPPVKT 120

Query: 127 WRKKYLHELQQDGFGSDQIPNHY-WMEEDEDDEIVFNP------------------KYVK 186
              KY     +        P H+        +  + NP                   YVK
Sbjct: 121 CMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVK 180

Query: 187 VKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLA 227
           VKM+GV IARK+D+ L++SY++L  +LI MF++  Y+ C   + N T T+Q KEGDWLL 
Sbjct: 181 VKMDGVAIARKVDIKLFNSYESLTNSLITMFTE--YEDCDREDTNYTFTFQGKEGDWLLR 228

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy Swiss-Prot
Match: Q75GB1 (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 51/150 (34.00%), Postives = 86/150 (57.33%), Query Frame = 0


Query: 84  KEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWM 143
           +ED+D ++ +++ + A    A +  +V+GWPPI+S+RK  +         ++Q+ +    
Sbjct: 92  EEDEDAEEEDKKVAAAPQAPAAKA-QVVGWPPIRSYRKNTM--------ATNQLKS---S 151

Query: 144 EEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSS-- 203
           +ED + +      YVKV M+G P  RK+D+  Y +Y+ L TAL  MF      K G S  
Sbjct: 152 KEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDGLSES 211

Query: 204 --NANLTLTYQNKEGDWLLAGDLPWQIGSN 230
             +    LTY++K+GDW+L GD+PW++ +N
Sbjct: 212 RKDGEYVLTYEDKDGDWMLVGDVPWEMFAN 229

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy Swiss-Prot
Match: A2WTQ5 (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica OX=39946 GN=IAA5 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 9.6e-15
Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPP++++RK  L      G G D+                  P YVKV M+G P  
Sbjct: 118 QVVGWPPVRNYRKNTLAASASKGKGEDK------------GTAEGGPLYVKVSMDGAPYL 177

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCG---SSNAN---------------LTLTYQ 227
           RK+D+ +YSSY+ L  AL  MFS     + G   SSN +                 LTY+
Sbjct: 178 RKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYE 237

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy Swiss-Prot
Match: Q0JKG7 (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA5 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.6e-15
Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPP++++RK  L      G G D+                  P YVKV M+G P  
Sbjct: 117 QVVGWPPVRNYRKNTLAASASKGKGEDK------------GTAEGGPLYVKVSMDGAPYL 176

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCG---SSNAN---------------LTLTYQ 227
           RK+D+ +YSSY+ L  AL  MFS     + G   SSN +                 LTY+
Sbjct: 177 RKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYE 236

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy Swiss-Prot
Match: Q38826 (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  
Sbjct: 165 QVVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYL 224

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQ 227
           RK+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY+
Sbjct: 225 RKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYE 284

[Close]

BLAST of Cp4.1LG06g03300 vs. NCBI nr
Match: XP_023535367.1 (auxin-responsive protein IAA28 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 470 bits (1209), Expect = 4.57e-167
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 120

Query: 127 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 186
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 187 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Cp4.1LG06g03300 vs. NCBI nr
Match: XP_023535365.1 (auxin-responsive protein IAA28 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465 bits (1197), Expect = 3.20e-165
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAEEENKVMGWPPIKSWRKKYLH 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NAEEENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAEEENKVMGWPPIKSWRKKYLH 120

Query: 127 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 186
           ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180

Query: 187 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Cp4.1LG06g03300 vs. NCBI nr
Match: KAG6591567.1 (Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia] >KAG6591604.1 Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 464 bits (1194), Expect = 4.59e-165
Identity = 217/219 (99.09%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINA EENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 127 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 186
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 187 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Cp4.1LG06g03300 vs. NCBI nr
Match: XP_022937068.1 (auxin-responsive protein IAA28 isoform X2 [Cucurbita moschata])

HSP 1 Score: 462 bits (1190), Expect = 3.60e-164
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINA EENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 127 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 186
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETAL 180

Query: 187 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Cp4.1LG06g03300 vs. NCBI nr
Match: XP_022937067.1 (auxin-responsive protein IAA28 isoform X1 [Cucurbita moschata])

HSP 1 Score: 458 bits (1178), Expect = 2.52e-162
Identity = 216/220 (98.18%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAEEENKVMGWPPIKSWRKKYLH 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NA EENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAGEENKVMGWPPIKSWRKKYLH 120

Query: 127 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 186
           ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETA 180

Query: 187 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy TrEMBL
Match: A0A6J1FF02 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1)

HSP 1 Score: 462 bits (1190), Expect = 1.74e-164
Identity = 216/219 (98.63%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINA EENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 127 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 186
           LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETAL 180

Query: 187 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy TrEMBL
Match: A0A6J1FA34 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1)

HSP 1 Score: 458 bits (1178), Expect = 1.22e-162
Identity = 216/220 (98.18%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAEEENKVMGWPPIKSWRKKYLH 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NA EENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAGEENKVMGWPPIKSWRKKYLH 120

Query: 127 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 186
           ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTL+TA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLETA 180

Query: 187 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy TrEMBL
Match: A0A6J1ILE5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 1.38e-161
Identity = 214/219 (97.72%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLHE 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINA EENKVMGWPPIKSWRKKYLHE
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAGEENKVMGWPPIKSWRKKYLHE 120

Query: 127 LQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 186
           LQQDGFGSDQIPNHYWMEEDED+EIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL
Sbjct: 121 LQQDGFGSDQIPNHYWMEEDEDEEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTAL 180

Query: 187 IHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           I MFSDSCYQKCGSSNA LTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 IPMFSDSCYQKCGSSNAILTLTYQNKEGDWLLAGDLPWQ 219

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy TrEMBL
Match: A0A6J1IF49 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 9.63e-160
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDAFFKS 66
           MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCL AESTSHGRHKRGYEDAFFKS
Sbjct: 1   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLCAESTSHGRHKRGYEDAFFKS 60

Query: 67  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI-NAEEENKVMGWPPIKSWRKKYLH 126
           KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHI NA EENKVMGWPPIKSWRKKYLH
Sbjct: 61  KDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHIRNAGEENKVMGWPPIKSWRKKYLH 120

Query: 127 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 186
           ELQQDGFGSDQIPNHYWMEEDED+EIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA
Sbjct: 121 ELQQDGFGSDQIPNHYWMEEDEDEEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 180

Query: 187 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
           LI MFSDSCYQKCGSSNA LTLTYQNKEGDWLLAGDLPWQ
Sbjct: 181 LIPMFSDSCYQKCGSSNAILTLTYQNKEGDWLLAGDLPWQ 220

[Close]

BLAST of Cp4.1LG06g03300 vs. ExPASy TrEMBL
Match: A0A0A0LGM4 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G877650 PE=3 SV=1)

HSP 1 Score: 377 bits (968), Expect = 1.07e-130
Identity = 182/220 (82.73%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 7   MELQLELALCVSDPTRGFDLNRAACDGKDVFGSDPRSCLRAESTSHG-RHKRGYEDAFFK 66
           MELQLEL L V DPTRGFDLNR ACDGKDVFGSDPRS L AESTSHG R+KRG+EDAFFK
Sbjct: 1   MELQLELELSVPDPTRGFDLNRNACDGKDVFGSDPRSYLCAESTSHGKRNKRGFEDAFFK 60

Query: 67  SKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKSWRKKYLH 126
           +K SFKE+SLLLW+GHPNKEDDD KDTNQRSSCA+HI A EENK +GWPPI SWRK++LH
Sbjct: 61  TKGSFKEMSLLLWNGHPNKEDDDRKDTNQRSSCAIHIKAVEENKAVGWPPIASWRKRHLH 120

Query: 127 ELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIARKIDVGLYSSYQTLKTA 186
            LQQ G GSD    +YWMEEDEDD IVFNPKYVKVKMEGVPIARKIDVG+Y+SYQTLKTA
Sbjct: 121 GLQQGGPGSD----NYWMEEDEDDGIVFNPKYVKVKMEGVPIARKIDVGMYNSYQTLKTA 180

Query: 187 LIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLAGDLPWQ 225
            I+MFSDSCYQKCG+SNA+LTLTYQ+KEGDWLLAGDLPWQ
Sbjct: 181 SINMFSDSCYQKCGNSNASLTLTYQDKEGDWLLAGDLPWQ 216

[Close]

BLAST of Cp4.1LG06g03300 vs. TAIR 10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29 )

HSP 1 Score: 103.6 bits (257), Expect = 2.2e-22
Identity = 79/247 (31.98%), Postives = 118/247 (47.77%), Query Frame = 0


Query: 7   MELQLELALCVSDPTR---GFDLNR-AACDGKDVFGSDPRSCLRAESTSHGRHKRGYEDA 66
           MEL L L+L     ++    FDLN+  A +G         SCL       G  K  +E  
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEG-------AASCL-------GTEKLRFEAT 60

Query: 67  F----FKSKDSFKELSLLLWSGHPNKEDDDWKDTNQRSSCALHINAEEENKVMGWPPIKS 126
           F     +      +  L   +G PN+ED+   D  +  S  ++ + EE ++V+GWPP+K+
Sbjct: 61  FGLGNVEENCYMPKQRLFALNGQPNEEDE---DPLESESSIVYDDEEENSEVVGWPPVKT 120

Query: 127 WRKKYLHELQQDGFGSDQIPNHY-WMEEDEDDEIVFNP------------------KYVK 186
              KY     +        P H+        +  + NP                   YVK
Sbjct: 121 CMIKYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVK 180

Query: 187 VKMEGVPIARKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNANLTLTYQNKEGDWLLA 227
           VKM+GV IARK+D+ L++SY++L  +LI MF++  Y+ C   + N T T+Q KEGDWLL 
Sbjct: 181 VKMDGVAIARKVDIKLFNSYESLTNSLITMFTE--YEDCDREDTNYTFTFQGKEGDWLLR 228

[Close]

BLAST of Cp4.1LG06g03300 vs. TAIR 10
Match: AT2G22670.1 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  
Sbjct: 165 QVVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYL 224

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQ 227
           RK+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY+
Sbjct: 225 RKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYE 284

[Close]

BLAST of Cp4.1LG06g03300 vs. TAIR 10
Match: AT2G22670.2 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  
Sbjct: 165 QVVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYL 224

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQ 227
           RK+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY+
Sbjct: 225 RKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYE 284

[Close]

BLAST of Cp4.1LG06g03300 vs. TAIR 10
Match: AT2G22670.3 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  
Sbjct: 165 QVVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYL 224

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQ 227
           RK+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY+
Sbjct: 225 RKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYE 284

[Close]

BLAST of Cp4.1LG06g03300 vs. TAIR 10
Match: AT2G22670.4 (indoleacetic acid-induced protein 8 )

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0


Query: 109 KVMGWPPIKSWRKKYLHELQQDGFGSDQIPNHYWMEEDEDDEIVFNPKYVKVKMEGVPIA 168
           +V+GWPPI+S+RK  +         S    N     ++ D +      +VKV M+G P  
Sbjct: 182 QVVGWPPIRSYRKNTM--------ASSTSKN----TDEVDGKPGLGVLFVKVSMDGAPYL 241

Query: 169 RKIDVGLYSSYQTLKTALIHMFSDSCYQKCGSSNA------------------NLTLTYQ 227
           RK+D+  Y+SYQ L +AL  MFS     +CG   A                     LTY+
Sbjct: 242 RKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYE 301

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g03300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WC4	3.1e-21	31.98	Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=...	[more]
Q75GB1	2.3e-16	34.00	Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA17...	[more]
A2WTQ5	9.6e-15	35.29	Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica OX=39946 GN=IAA5 PE=...	[more]
Q0JKG7	9.6e-15	35.29	Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA5 P...	[more]
Q38826	1.6e-14	34.56	Auxin-responsive protein IAA8 OS=Arabidopsis thaliana OX=3702 GN=IAA8 PE=1 SV=1	[more]

BLAST of Cp4.1LG06g03300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535367.1	4.57e-167	100.00	auxin-responsive protein IAA28 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023535365.1	3.20e-165	99.55	auxin-responsive protein IAA28 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6591567.1	4.59e-165	99.09	Auxin-responsive protein IAA29, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022937068.1	3.60e-164	98.63	auxin-responsive protein IAA28 isoform X2 [Cucurbita moschata]	[more]
XP_022937067.1	2.52e-162	98.18	auxin-responsive protein IAA28 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG06g03300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF02	1.74e-164	98.63	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1	[more]
A0A6J1FA34	1.22e-162	98.18	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111443480 PE=3 SV=1	[more]
A0A6J1ILE5	1.38e-161	97.72	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1	[more]
A0A6J1IF49	9.63e-160	97.27	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111476655 PE=3 SV=1	[more]
A0A0A0LGM4	1.07e-130	82.73	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G877650 PE=3 SV=1	[more]

BLAST of Cp4.1LG06g03300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32280.1	2.2e-22	31.98	indole-3-acetic acid inducible 29	[more]
AT2G22670.1	1.2e-15	34.56	indoleacetic acid-induced protein 8	[more]
AT2G22670.2	1.2e-15	34.56	indoleacetic acid-induced protein 8	[more]
AT2G22670.3	1.2e-15	34.56	indoleacetic acid-induced protein 8	[more]
AT2G22670.4	1.2e-15	34.56	indoleacetic acid-induced protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 151..230 e-value: 2.1E-22 score: 81.0
None	No IPR available	PANTHER	PTHR31734:SF44	AUXIN-RESPONSIVE PROTEIN IAA29	coord: 7..226
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 152..227
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 50..203 e-value: 7.4E-24 score: 84.9 coord: 204..226 e-value: 2.2E-5 score: 24.5
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 7..226
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 155..232 score: 19.907536

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g03300.1	Cp4.1LG06g03300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding